Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041419.t1 | XP_013442356.1 | 99 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 8.80E-272 | 945.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041419.t1 | O04249 | 78.6 | 490 | 105 | 0 | 4 | 493 | 10 | 499 | 1.3e-226 | 786.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041419.t1 | A0A072TGU8 | 99.0 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 6.4e-272 | 945.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041419.t1 | MTR_0204s0020 | 98.986 | 493 | 5 | 0 | 1 | 493 | 1 | 493 | 0.0 | 987 |
MS.gene041419.t1 | MTR_0204s0020 | 98.377 | 493 | 5 | 1 | 1 | 493 | 1 | 490 | 0.0 | 976 |
MS.gene041419.t1 | MTR_4g116770 | 81.437 | 501 | 85 | 1 | 1 | 493 | 197 | 697 | 0.0 | 845 |
MS.gene041419.t1 | MTR_0204s0040 | 81.437 | 501 | 85 | 1 | 1 | 493 | 1 | 501 | 0.0 | 844 |
MS.gene041419.t1 | MTR_4g116790 | 82.164 | 499 | 83 | 1 | 1 | 493 | 1 | 499 | 0.0 | 837 |
MS.gene041419.t1 | MTR_7g091690 | 83.231 | 489 | 82 | 0 | 5 | 493 | 11 | 499 | 0.0 | 835 |
MS.gene041419.t1 | MTR_5g094760 | 83.845 | 489 | 79 | 0 | 5 | 493 | 11 | 499 | 0.0 | 833 |
MS.gene041419.t1 | MTR_6g087040 | 57.927 | 492 | 205 | 2 | 3 | 492 | 8 | 499 | 0.0 | 613 |
MS.gene041419.t1 | MTR_6g088375 | 57.927 | 492 | 205 | 2 | 3 | 492 | 8 | 499 | 0.0 | 613 |
MS.gene041419.t1 | MTR_4g116790 | 80.274 | 365 | 66 | 1 | 1 | 359 | 1 | 365 | 0.0 | 611 |
MS.gene041419.t1 | MTR_8g102860 | 59.548 | 487 | 193 | 3 | 9 | 492 | 14 | 499 | 0.0 | 607 |
MS.gene041419.t1 | MTR_3g008160 | 59.834 | 483 | 191 | 3 | 13 | 492 | 15 | 497 | 0.0 | 606 |
MS.gene041419.t1 | MTR_5g006070 | 57.407 | 486 | 202 | 4 | 12 | 492 | 13 | 498 | 0.0 | 603 |
MS.gene041419.t1 | MTR_1g104770 | 56.701 | 485 | 205 | 4 | 13 | 492 | 15 | 499 | 0.0 | 592 |
MS.gene041419.t1 | MTR_1g104750 | 54.752 | 484 | 215 | 4 | 13 | 492 | 15 | 498 | 0.0 | 578 |
MS.gene041419.t1 | MTR_5g082540 | 56.939 | 490 | 206 | 3 | 5 | 490 | 7 | 495 | 0.0 | 571 |
MS.gene041419.t1 | MTR_3g008170 | 55.221 | 498 | 217 | 5 | 1 | 492 | 1 | 498 | 0.0 | 565 |
MS.gene041419.t1 | MTR_0009s0370 | 54.918 | 488 | 214 | 3 | 11 | 492 | 11 | 498 | 0.0 | 561 |
MS.gene041419.t1 | MTR_8g102860 | 59.821 | 448 | 176 | 3 | 48 | 492 | 1 | 447 | 0.0 | 560 |
MS.gene041419.t1 | MTR_1g038630 | 56.108 | 483 | 207 | 3 | 12 | 490 | 14 | 495 | 0.0 | 558 |
MS.gene041419.t1 | MTR_5g006070 | 57.111 | 450 | 188 | 4 | 48 | 492 | 1 | 450 | 0.0 | 555 |
MS.gene041419.t1 | MTR_1g104780 | 57.569 | 469 | 194 | 4 | 27 | 490 | 28 | 496 | 0.0 | 554 |
MS.gene041419.t1 | MTR_3g008160 | 58.705 | 448 | 182 | 3 | 48 | 492 | 1 | 448 | 0.0 | 553 |
MS.gene041419.t1 | MTR_5g041550 | 54.639 | 485 | 214 | 3 | 11 | 489 | 13 | 497 | 0.0 | 541 |
MS.gene041419.t1 | MTR_3g093010 | 52.632 | 494 | 228 | 3 | 5 | 492 | 6 | 499 | 0.0 | 540 |
MS.gene041419.t1 | MTR_3g023480 | 52.505 | 499 | 226 | 5 | 2 | 492 | 3 | 498 | 0.0 | 536 |
MS.gene041419.t1 | MTR_1g038600 | 55.052 | 485 | 199 | 4 | 11 | 493 | 13 | 480 | 0.0 | 535 |
MS.gene041419.t1 | MTR_4g091370 | 55.761 | 486 | 210 | 3 | 12 | 492 | 14 | 499 | 0.0 | 531 |
MS.gene041419.t1 | MTR_3g074390 | 50.103 | 487 | 238 | 4 | 8 | 490 | 15 | 500 | 0.0 | 519 |
MS.gene041419.t1 | MTR_4g090600 | 55.967 | 486 | 209 | 3 | 12 | 492 | 14 | 499 | 2.79e-179 | 513 |
MS.gene041419.t1 | MTR_3g074410 | 49.180 | 488 | 243 | 4 | 7 | 490 | 11 | 497 | 6.76e-175 | 501 |
MS.gene041419.t1 | MTR_3g007910 | 48.984 | 492 | 217 | 5 | 5 | 492 | 6 | 467 | 7.98e-173 | 495 |
MS.gene041419.t1 | MTR_3g093060 | 53.111 | 450 | 204 | 3 | 48 | 490 | 1 | 450 | 6.80e-170 | 487 |
MS.gene041419.t1 | MTR_3g074270 | 48.780 | 492 | 230 | 4 | 1 | 489 | 1 | 473 | 1.83e-168 | 484 |
MS.gene041419.t1 | MTR_3g074380 | 51.009 | 347 | 167 | 3 | 15 | 359 | 20 | 365 | 2.78e-121 | 360 |
MS.gene041419.t1 | MTR_3g074320 | 49.032 | 310 | 153 | 4 | 185 | 490 | 20 | 328 | 1.30e-109 | 329 |
MS.gene041419.t1 | MTR_3g074340 | 48.710 | 310 | 154 | 4 | 185 | 490 | 20 | 328 | 3.03e-109 | 328 |
MS.gene041419.t1 | MTR_3g074370 | 48.710 | 310 | 154 | 4 | 185 | 490 | 20 | 328 | 3.34e-109 | 328 |
MS.gene041419.t1 | MTR_3g074400 | 36.807 | 451 | 232 | 10 | 48 | 476 | 1 | 420 | 4.22e-90 | 281 |
MS.gene041419.t1 | MTR_6g088450 | 29.060 | 468 | 293 | 13 | 20 | 472 | 57 | 500 | 1.82e-56 | 196 |
MS.gene041419.t1 | MTR_8g103500 | 28.543 | 494 | 305 | 11 | 9 | 482 | 6 | 471 | 8.77e-55 | 191 |
MS.gene041419.t1 | MTR_3g084110 | 27.119 | 472 | 318 | 7 | 20 | 485 | 27 | 478 | 7.84e-54 | 189 |
MS.gene041419.t1 | MTR_4g069500 | 28.279 | 488 | 301 | 10 | 24 | 486 | 32 | 495 | 7.26e-53 | 187 |
MS.gene041419.t1 | MTR_4g069500 | 28.995 | 438 | 282 | 7 | 73 | 486 | 13 | 445 | 4.08e-52 | 183 |
MS.gene041419.t1 | MTR_7g005910 | 27.991 | 468 | 304 | 10 | 27 | 485 | 39 | 482 | 2.40e-51 | 182 |
MS.gene041419.t1 | MTR_1g116650 | 28.870 | 478 | 289 | 11 | 20 | 485 | 77 | 515 | 2.45e-51 | 183 |
MS.gene041419.t1 | MTR_4g072030 | 27.743 | 483 | 309 | 9 | 24 | 486 | 29 | 491 | 1.32e-50 | 181 |
MS.gene041419.t1 | MTR_4g077740 | 30.526 | 475 | 288 | 11 | 22 | 478 | 46 | 496 | 3.63e-50 | 179 |
MS.gene041419.t1 | MTR_1g116660 | 27.505 | 469 | 306 | 11 | 27 | 485 | 41 | 485 | 1.24e-48 | 175 |
MS.gene041419.t1 | MTR_5g075300 | 27.642 | 492 | 314 | 9 | 16 | 485 | 14 | 485 | 1.63e-48 | 174 |
MS.gene041419.t1 | MTR_7g446340 | 25.800 | 500 | 325 | 10 | 2 | 485 | 36 | 505 | 2.14e-48 | 175 |
MS.gene041419.t1 | MTR_6g007340 | 25.800 | 500 | 325 | 10 | 2 | 485 | 36 | 505 | 2.14e-48 | 175 |
MS.gene041419.t1 | MTR_6g018790 | 28.274 | 481 | 309 | 9 | 2 | 478 | 90 | 538 | 1.04e-47 | 173 |
MS.gene041419.t1 | MTR_8g077890 | 28.600 | 500 | 312 | 12 | 9 | 485 | 8 | 485 | 1.19e-47 | 172 |
MS.gene041419.t1 | MTR_2g013310 | 28.000 | 475 | 305 | 12 | 22 | 484 | 53 | 502 | 6.64e-47 | 171 |
MS.gene041419.t1 | MTR_5g096000 | 46.995 | 183 | 79 | 1 | 5 | 187 | 6 | 170 | 1.03e-46 | 164 |
MS.gene041419.t1 | MTR_5g096000 | 51.449 | 138 | 66 | 1 | 355 | 492 | 162 | 298 | 7.80e-38 | 140 |
MS.gene041419.t1 | MTR_7g082270 | 27.893 | 484 | 309 | 11 | 1 | 478 | 49 | 498 | 1.24e-46 | 169 |
MS.gene041419.t1 | MTR_3g116240 | 27.572 | 486 | 293 | 12 | 24 | 478 | 30 | 487 | 3.17e-46 | 168 |
MS.gene041419.t1 | MTR_2g013310 | 28.467 | 411 | 277 | 9 | 85 | 484 | 25 | 429 | 1.84e-45 | 165 |
MS.gene041419.t1 | MTR_8g077310 | 28.511 | 470 | 299 | 8 | 16 | 478 | 42 | 481 | 4.69e-45 | 165 |
MS.gene041419.t1 | MTR_1g022315 | 29.949 | 394 | 261 | 6 | 91 | 478 | 1 | 385 | 1.15e-44 | 161 |
MS.gene041419.t1 | MTR_1g022315 | 29.777 | 403 | 268 | 6 | 82 | 478 | 91 | 484 | 1.29e-44 | 164 |
MS.gene041419.t1 | MTR_2g048720 | 32.303 | 356 | 213 | 8 | 1 | 346 | 1 | 338 | 1.32e-43 | 162 |
MS.gene041419.t1 | MTR_5g077580 | 26.714 | 569 | 291 | 16 | 20 | 491 | 25 | 564 | 2.95e-43 | 161 |
MS.gene041419.t1 | MTR_2g049020 | 30.159 | 378 | 233 | 8 | 1 | 365 | 1 | 360 | 4.14e-43 | 161 |
MS.gene041419.t1 | MTR_2g049020 | 37.069 | 116 | 60 | 4 | 384 | 490 | 454 | 565 | 1.95e-12 | 70.1 |
MS.gene041419.t1 | MTR_8g077310 | 30.380 | 395 | 257 | 7 | 91 | 478 | 1 | 384 | 4.59e-43 | 157 |
MS.gene041419.t1 | MTR_8g077300 | 27.331 | 472 | 304 | 8 | 15 | 478 | 33 | 473 | 1.93e-42 | 157 |
MS.gene041419.t1 | MTR_1g038620 | 43.671 | 158 | 72 | 1 | 200 | 357 | 50 | 190 | 1.19e-41 | 147 |
MS.gene041419.t1 | MTR_7g082270 | 27.336 | 428 | 278 | 8 | 1 | 426 | 49 | 445 | 3.61e-41 | 154 |
MS.gene041419.t1 | MTR_3g074330 | 48.299 | 147 | 69 | 1 | 10 | 149 | 12 | 158 | 8.58e-40 | 142 |
MS.gene041419.t1 | MTR_3g074360 | 48.299 | 147 | 69 | 1 | 10 | 149 | 12 | 158 | 8.58e-40 | 142 |
MS.gene041419.t1 | MTR_3g074310 | 48.299 | 147 | 69 | 1 | 10 | 149 | 12 | 158 | 2.20e-39 | 141 |
MS.gene041419.t1 | MTR_5g020270 | 27.158 | 475 | 312 | 10 | 10 | 478 | 38 | 484 | 3.27e-39 | 149 |
MS.gene041419.t1 | MTR_5g020270 | 29.008 | 393 | 265 | 7 | 91 | 478 | 1 | 384 | 5.19e-39 | 146 |
MS.gene041419.t1 | MTR_7g113960 | 25.966 | 466 | 299 | 10 | 21 | 478 | 27 | 454 | 2.26e-37 | 143 |
MS.gene041419.t1 | MTR_7g094450 | 28.040 | 403 | 269 | 7 | 82 | 478 | 82 | 469 | 3.46e-37 | 143 |
MS.gene041419.t1 | MTR_7g113970 | 26.185 | 401 | 283 | 6 | 82 | 480 | 104 | 493 | 6.02e-37 | 142 |
MS.gene041419.t1 | MTR_2g020710 | 26.721 | 494 | 302 | 15 | 2 | 478 | 29 | 479 | 9.73e-37 | 142 |
MS.gene041419.t1 | MTR_2g020710 | 28.155 | 412 | 258 | 12 | 82 | 478 | 2 | 390 | 1.14e-36 | 140 |
MS.gene041419.t1 | MTR_6g087910 | 25.792 | 442 | 309 | 9 | 45 | 480 | 56 | 484 | 1.53e-36 | 141 |
MS.gene041419.t1 | MTR_0064s0040 | 43.038 | 158 | 76 | 3 | 7 | 163 | 10 | 154 | 5.28e-36 | 131 |
MS.gene041419.t1 | MTR_3g080240 | 24.784 | 464 | 312 | 12 | 20 | 478 | 96 | 527 | 1.86e-35 | 139 |
MS.gene041419.t1 | MTR_2g026160 | 28.726 | 369 | 228 | 6 | 28 | 382 | 34 | 381 | 3.01e-35 | 139 |
MS.gene041419.t1 | MTR_7g094110 | 28.040 | 403 | 269 | 8 | 82 | 478 | 84 | 471 | 4.67e-35 | 137 |
MS.gene041419.t1 | MTR_4g013205 | 24.943 | 441 | 314 | 7 | 45 | 480 | 42 | 470 | 2.32e-34 | 135 |
MS.gene041419.t1 | MTR_4g064820 | 33.239 | 355 | 191 | 11 | 21 | 350 | 96 | 429 | 5.83e-34 | 134 |
MS.gene041419.t1 | MTR_4g069500 | 29.773 | 309 | 189 | 6 | 201 | 486 | 3 | 306 | 6.63e-34 | 130 |
MS.gene041419.t1 | MTR_4g118610 | 26.866 | 402 | 276 | 8 | 82 | 478 | 94 | 482 | 1.39e-33 | 133 |
MS.gene041419.t1 | MTR_5g019870 | 27.088 | 491 | 304 | 17 | 24 | 485 | 17 | 482 | 1.87e-33 | 132 |
MS.gene041419.t1 | MTR_5g020270 | 25.311 | 482 | 291 | 11 | 10 | 478 | 38 | 463 | 3.06e-33 | 131 |
MS.gene041419.t1 | MTR_8g077310 | 26.632 | 383 | 247 | 7 | 16 | 394 | 42 | 394 | 4.53e-31 | 124 |
MS.gene041419.t1 | MTR_7g094110 | 26.617 | 402 | 256 | 8 | 82 | 478 | 84 | 451 | 2.17e-28 | 117 |
MS.gene041419.t1 | MTR_2g026140 | 26.216 | 370 | 222 | 9 | 27 | 383 | 30 | 361 | 8.32e-27 | 114 |
MS.gene041419.t1 | MTR_7g113960 | 26.627 | 338 | 208 | 8 | 18 | 348 | 24 | 328 | 9.81e-25 | 106 |
MS.gene041419.t1 | MTR_1g114280 | 35.948 | 153 | 77 | 3 | 343 | 493 | 21 | 154 | 2.01e-24 | 99.8 |
MS.gene041419.t1 | MTR_2g020710 | 25.647 | 425 | 256 | 15 | 2 | 409 | 29 | 410 | 3.32e-24 | 105 |
MS.gene041419.t1 | MTR_2g020710 | 25.708 | 424 | 255 | 15 | 2 | 408 | 29 | 409 | 6.59e-24 | 104 |
MS.gene041419.t1 | MTR_5g024740 | 29.167 | 240 | 150 | 4 | 19 | 256 | 2 | 223 | 7.01e-23 | 102 |
MS.gene041419.t1 | MTR_7g113970 | 27.138 | 269 | 185 | 5 | 82 | 348 | 104 | 363 | 1.03e-22 | 100 |
MS.gene041419.t1 | MTR_2g020710 | 25.833 | 360 | 215 | 11 | 2 | 347 | 29 | 350 | 2.86e-22 | 98.6 |
MS.gene041419.t1 | MTR_4g118610 | 25.826 | 333 | 229 | 8 | 82 | 409 | 94 | 413 | 4.77e-21 | 95.9 |
MS.gene041419.t1 | MTR_3g116060 | 32.370 | 173 | 112 | 2 | 88 | 257 | 52 | 222 | 6.99e-21 | 96.7 |
MS.gene041419.t1 | MTR_3g116060 | 28.511 | 235 | 149 | 6 | 254 | 476 | 484 | 711 | 5.01e-12 | 68.9 |
MS.gene041419.t1 | MTR_3g118530 | 32.164 | 171 | 115 | 1 | 88 | 257 | 54 | 224 | 2.89e-20 | 94.7 |
MS.gene041419.t1 | MTR_3g118530 | 27.660 | 235 | 151 | 6 | 254 | 476 | 494 | 721 | 2.23e-12 | 70.1 |
MS.gene041419.t1 | MTR_8g073100 | 25.490 | 255 | 166 | 3 | 84 | 330 | 50 | 288 | 2.92e-20 | 94.7 |
MS.gene041419.t1 | MTR_5g044910 | 31.250 | 176 | 116 | 2 | 84 | 256 | 50 | 223 | 3.46e-20 | 94.4 |
MS.gene041419.t1 | MTR_3g118530 | 32.164 | 171 | 115 | 1 | 88 | 257 | 54 | 224 | 8.06e-20 | 93.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041419.t1 | AT4G02050 | 78.571 | 490 | 105 | 0 | 4 | 493 | 10 | 499 | 0.0 | 822 |
MS.gene041419.t1 | AT4G02050 | 78.571 | 490 | 105 | 0 | 4 | 493 | 10 | 499 | 0.0 | 822 |
MS.gene041419.t1 | AT5G26340 | 59.259 | 486 | 193 | 4 | 12 | 492 | 14 | 499 | 0.0 | 614 |
MS.gene041419.t1 | AT1G77210 | 58.471 | 484 | 199 | 2 | 9 | 490 | 14 | 497 | 0.0 | 604 |
MS.gene041419.t1 | AT1G77210 | 58.471 | 484 | 199 | 2 | 9 | 490 | 14 | 497 | 0.0 | 604 |
MS.gene041419.t1 | AT3G19940 | 56.250 | 480 | 207 | 2 | 17 | 493 | 21 | 500 | 0.0 | 585 |
MS.gene041419.t1 | AT1G50310 | 56.757 | 481 | 204 | 3 | 17 | 493 | 21 | 501 | 0.0 | 581 |
MS.gene041419.t1 | AT1G11260 | 56.701 | 485 | 205 | 3 | 13 | 492 | 15 | 499 | 0.0 | 561 |
MS.gene041419.t1 | AT5G23270 | 56.405 | 484 | 206 | 4 | 12 | 490 | 15 | 498 | 0.0 | 555 |
MS.gene041419.t1 | AT3G19930 | 54.639 | 485 | 217 | 2 | 12 | 493 | 14 | 498 | 0.0 | 549 |
MS.gene041419.t1 | AT3G19930 | 54.639 | 485 | 217 | 2 | 12 | 493 | 14 | 498 | 0.0 | 549 |
MS.gene041419.t1 | AT4G21480 | 55.694 | 483 | 209 | 3 | 12 | 490 | 14 | 495 | 0.0 | 543 |
MS.gene041419.t1 | AT3G05960 | 51.324 | 491 | 237 | 2 | 5 | 493 | 5 | 495 | 0.0 | 534 |
MS.gene041419.t1 | AT1G34580 | 52.459 | 488 | 224 | 4 | 10 | 490 | 13 | 499 | 0.0 | 533 |
MS.gene041419.t1 | AT5G26250 | 51.134 | 485 | 236 | 1 | 9 | 492 | 10 | 494 | 0.0 | 532 |
MS.gene041419.t1 | AT5G61520 | 51.033 | 484 | 229 | 3 | 15 | 491 | 18 | 500 | 6.08e-180 | 514 |
MS.gene041419.t1 | AT1G34580 | 52.444 | 450 | 206 | 4 | 48 | 490 | 1 | 449 | 1.56e-170 | 488 |
MS.gene041419.t1 | AT1G07340 | 51.975 | 481 | 227 | 4 | 13 | 490 | 15 | 494 | 1.94e-168 | 485 |
MS.gene041419.t1 | AT5G61520 | 50.885 | 452 | 214 | 3 | 47 | 491 | 2 | 452 | 9.50e-165 | 474 |
MS.gene041419.t1 | AT1G77210 | 57.726 | 343 | 144 | 1 | 149 | 490 | 6 | 348 | 4.07e-147 | 425 |
MS.gene041419.t1 | AT1G50310 | 53.736 | 348 | 158 | 2 | 149 | 493 | 11 | 358 | 2.72e-140 | 408 |
MS.gene041419.t1 | AT2G18480 | 30.573 | 471 | 273 | 13 | 35 | 478 | 36 | 479 | 7.43e-55 | 192 |
MS.gene041419.t1 | AT4G36670 | 29.026 | 503 | 308 | 11 | 10 | 485 | 2 | 482 | 5.84e-53 | 186 |
MS.gene041419.t1 | AT2G43330 | 29.167 | 480 | 303 | 11 | 20 | 487 | 30 | 484 | 1.11e-51 | 183 |
MS.gene041419.t1 | AT2G16120 | 27.379 | 515 | 326 | 10 | 1 | 490 | 6 | 497 | 2.97e-51 | 182 |
MS.gene041419.t1 | AT3G18830 | 28.631 | 482 | 292 | 12 | 24 | 478 | 38 | 494 | 8.73e-50 | 179 |
MS.gene041419.t1 | AT2G16130 | 27.165 | 508 | 324 | 10 | 2 | 485 | 7 | 492 | 3.00e-49 | 177 |
MS.gene041419.t1 | AT5G59250 | 30.977 | 481 | 285 | 12 | 20 | 478 | 97 | 552 | 1.24e-47 | 173 |
MS.gene041419.t1 | AT5G17010 | 29.412 | 476 | 298 | 9 | 19 | 478 | 45 | 498 | 1.88e-47 | 172 |
MS.gene041419.t1 | AT5G17010 | 29.412 | 476 | 298 | 9 | 19 | 478 | 45 | 498 | 1.88e-47 | 172 |
MS.gene041419.t1 | AT5G17010 | 29.412 | 476 | 298 | 9 | 19 | 478 | 45 | 498 | 1.88e-47 | 172 |
MS.gene041419.t1 | AT5G16150 | 27.216 | 485 | 313 | 10 | 2 | 480 | 90 | 540 | 2.04e-46 | 169 |
MS.gene041419.t1 | AT5G16150 | 27.216 | 485 | 313 | 10 | 2 | 480 | 90 | 540 | 2.04e-46 | 169 |
MS.gene041419.t1 | AT5G16150 | 27.216 | 485 | 313 | 10 | 2 | 480 | 90 | 540 | 2.04e-46 | 169 |
MS.gene041419.t1 | AT1G75220 | 29.927 | 411 | 270 | 7 | 80 | 483 | 88 | 487 | 6.05e-46 | 167 |
MS.gene041419.t1 | AT3G05165 | 28.367 | 490 | 299 | 12 | 1 | 478 | 10 | 459 | 6.24e-46 | 167 |
MS.gene041419.t1 | AT3G05165 | 28.367 | 490 | 299 | 12 | 1 | 478 | 10 | 459 | 6.24e-46 | 167 |
MS.gene041419.t1 | AT3G05165 | 28.367 | 490 | 299 | 12 | 1 | 478 | 10 | 459 | 6.24e-46 | 167 |
MS.gene041419.t1 | AT1G08930 | 27.443 | 481 | 307 | 11 | 5 | 478 | 42 | 487 | 3.02e-45 | 166 |
MS.gene041419.t1 | AT1G08930 | 27.443 | 481 | 307 | 11 | 5 | 478 | 42 | 487 | 3.02e-45 | 166 |
MS.gene041419.t1 | AT3G03090 | 29.657 | 408 | 253 | 8 | 91 | 478 | 105 | 498 | 8.89e-44 | 161 |
MS.gene041419.t1 | AT2G20780 | 26.600 | 500 | 315 | 14 | 2 | 483 | 36 | 501 | 1.26e-43 | 162 |
MS.gene041419.t1 | AT5G27350 | 26.884 | 491 | 311 | 11 | 1 | 480 | 9 | 462 | 7.95e-43 | 158 |
MS.gene041419.t1 | AT1G08900 | 28.288 | 403 | 268 | 6 | 82 | 478 | 25 | 412 | 9.06e-43 | 157 |
MS.gene041419.t1 | AT5G27360 | 26.458 | 480 | 309 | 8 | 7 | 478 | 21 | 464 | 1.35e-42 | 158 |
MS.gene041419.t1 | AT1G08900 | 28.288 | 403 | 268 | 6 | 82 | 478 | 59 | 446 | 2.21e-42 | 157 |
MS.gene041419.t1 | AT5G27360 | 26.458 | 480 | 309 | 8 | 7 | 478 | 69 | 512 | 2.53e-42 | 158 |
MS.gene041419.t1 | AT1G08900 | 28.288 | 403 | 268 | 6 | 82 | 478 | 67 | 454 | 2.71e-42 | 157 |
MS.gene041419.t1 | AT1G08900 | 28.288 | 403 | 268 | 6 | 82 | 478 | 67 | 454 | 2.71e-42 | 157 |
MS.gene041419.t1 | AT1G19450 | 29.756 | 410 | 272 | 6 | 80 | 483 | 89 | 488 | 3.17e-42 | 157 |
MS.gene041419.t1 | AT3G05160 | 27.310 | 487 | 308 | 11 | 1 | 478 | 1 | 450 | 3.32e-42 | 156 |
MS.gene041419.t1 | AT1G08890 | 28.325 | 406 | 264 | 7 | 82 | 478 | 69 | 456 | 8.35e-42 | 155 |
MS.gene041419.t1 | AT3G05155 | 26.683 | 401 | 279 | 6 | 80 | 478 | 67 | 454 | 1.03e-40 | 152 |
MS.gene041419.t1 | AT3G05400 | 27.295 | 403 | 276 | 7 | 82 | 480 | 68 | 457 | 1.11e-40 | 152 |
MS.gene041419.t1 | AT2G20780 | 27.376 | 442 | 280 | 13 | 60 | 483 | 25 | 443 | 1.38e-40 | 152 |
MS.gene041419.t1 | AT2G48020 | 27.423 | 423 | 290 | 6 | 60 | 478 | 48 | 457 | 1.67e-40 | 152 |
MS.gene041419.t1 | AT2G48020 | 27.423 | 423 | 290 | 6 | 60 | 478 | 48 | 457 | 1.67e-40 | 152 |
MS.gene041419.t1 | AT3G05165 | 28.868 | 433 | 256 | 12 | 1 | 421 | 10 | 402 | 2.46e-40 | 152 |
MS.gene041419.t1 | AT3G05165 | 29.099 | 433 | 255 | 12 | 1 | 421 | 10 | 402 | 3.12e-40 | 151 |
MS.gene041419.t1 | AT3G05165 | 29.099 | 433 | 255 | 12 | 1 | 421 | 10 | 402 | 3.12e-40 | 151 |
MS.gene041419.t1 | AT3G05160 | 27.873 | 409 | 268 | 7 | 79 | 478 | 11 | 401 | 7.07e-39 | 146 |
MS.gene041419.t1 | AT3G05160 | 27.873 | 409 | 268 | 7 | 79 | 478 | 11 | 401 | 7.07e-39 | 146 |
MS.gene041419.t1 | AT3G05400 | 28.877 | 374 | 242 | 8 | 118 | 480 | 77 | 437 | 1.67e-38 | 146 |
MS.gene041419.t1 | AT5G18840 | 26.939 | 490 | 305 | 12 | 9 | 485 | 32 | 481 | 1.74e-38 | 146 |
MS.gene041419.t1 | AT5G27360 | 28.338 | 367 | 242 | 6 | 118 | 478 | 9 | 360 | 2.59e-38 | 144 |
MS.gene041419.t1 | AT5G27360 | 28.338 | 367 | 242 | 6 | 118 | 478 | 9 | 360 | 2.59e-38 | 144 |
MS.gene041419.t1 | AT1G30220 | 30.792 | 341 | 202 | 7 | 20 | 348 | 27 | 345 | 4.61e-38 | 147 |
MS.gene041419.t1 | AT1G05030 | 24.831 | 443 | 314 | 9 | 45 | 480 | 85 | 515 | 1.69e-37 | 144 |
MS.gene041419.t1 | AT1G05030 | 25.243 | 412 | 289 | 9 | 76 | 480 | 64 | 463 | 7.82e-37 | 142 |
MS.gene041419.t1 | AT1G08900 | 28.453 | 362 | 238 | 6 | 82 | 437 | 67 | 413 | 9.67e-37 | 141 |
MS.gene041419.t1 | AT4G16480 | 28.906 | 384 | 233 | 10 | 1 | 365 | 2 | 364 | 1.65e-36 | 142 |
MS.gene041419.t1 | AT4G16480 | 28.906 | 384 | 233 | 10 | 1 | 365 | 2 | 364 | 1.65e-36 | 142 |
MS.gene041419.t1 | AT4G16480 | 28.906 | 384 | 233 | 10 | 1 | 365 | 2 | 364 | 1.65e-36 | 142 |
MS.gene041419.t1 | AT2G35740 | 28.090 | 356 | 227 | 9 | 20 | 364 | 25 | 362 | 2.72e-36 | 142 |
MS.gene041419.t1 | AT4G04750 | 26.980 | 404 | 274 | 7 | 82 | 478 | 78 | 467 | 2.73e-36 | 140 |
MS.gene041419.t1 | AT4G04750 | 26.980 | 404 | 274 | 7 | 82 | 478 | 78 | 467 | 2.73e-36 | 140 |
MS.gene041419.t1 | AT1G54730 | 26.316 | 399 | 281 | 5 | 82 | 478 | 74 | 461 | 4.25e-36 | 140 |
MS.gene041419.t1 | AT4G04750 | 26.980 | 404 | 274 | 7 | 82 | 478 | 122 | 511 | 4.32e-36 | 140 |
MS.gene041419.t1 | AT4G04760 | 27.612 | 402 | 275 | 6 | 82 | 478 | 14 | 404 | 2.31e-35 | 137 |
MS.gene041419.t1 | AT4G04760 | 27.612 | 402 | 275 | 6 | 82 | 478 | 73 | 463 | 6.46e-35 | 136 |
MS.gene041419.t1 | AT3G05150 | 25.673 | 483 | 309 | 12 | 21 | 490 | 35 | 480 | 6.31e-34 | 134 |
MS.gene041419.t1 | AT3G05150 | 25.690 | 471 | 303 | 11 | 21 | 481 | 35 | 468 | 8.54e-34 | 133 |
MS.gene041419.t1 | AT3G05150 | 25.690 | 471 | 303 | 11 | 21 | 481 | 35 | 468 | 8.54e-34 | 133 |
MS.gene041419.t1 | AT1G67300 | 24.444 | 450 | 308 | 11 | 45 | 480 | 57 | 488 | 1.15e-33 | 133 |
MS.gene041419.t1 | AT1G67300 | 24.444 | 450 | 307 | 10 | 45 | 480 | 57 | 487 | 1.85e-33 | 132 |
MS.gene041419.t1 | AT1G67300 | 24.444 | 450 | 307 | 10 | 45 | 480 | 57 | 487 | 1.85e-33 | 132 |
MS.gene041419.t1 | AT1G08920 | 25.873 | 487 | 303 | 11 | 7 | 478 | 18 | 461 | 1.90e-33 | 132 |
MS.gene041419.t1 | AT1G08920 | 25.709 | 494 | 302 | 11 | 7 | 478 | 18 | 468 | 1.69e-32 | 129 |
MS.gene041419.t1 | AT1G79820 | 26.434 | 401 | 269 | 8 | 87 | 480 | 107 | 488 | 1.87e-32 | 130 |
MS.gene041419.t1 | AT1G79820 | 26.434 | 401 | 269 | 8 | 87 | 480 | 107 | 488 | 1.87e-32 | 130 |
MS.gene041419.t1 | AT1G67300 | 24.304 | 395 | 267 | 9 | 45 | 426 | 57 | 432 | 4.16e-32 | 128 |
MS.gene041419.t1 | AT1G67300 | 24.304 | 395 | 267 | 9 | 45 | 426 | 57 | 432 | 4.16e-32 | 128 |
MS.gene041419.t1 | AT1G67300 | 24.675 | 385 | 258 | 9 | 45 | 416 | 57 | 422 | 1.92e-31 | 126 |
MS.gene041419.t1 | AT1G67300 | 24.675 | 385 | 258 | 9 | 45 | 416 | 57 | 422 | 1.92e-31 | 126 |
MS.gene041419.t1 | AT5G27360 | 25.180 | 417 | 268 | 8 | 7 | 415 | 21 | 401 | 5.68e-31 | 124 |
MS.gene041419.t1 | AT4G04760 | 26.617 | 402 | 276 | 7 | 82 | 478 | 73 | 460 | 7.71e-31 | 125 |
MS.gene041419.t1 | AT1G54730 | 25.140 | 358 | 255 | 5 | 82 | 437 | 74 | 420 | 3.27e-30 | 122 |
MS.gene041419.t1 | AT5G17010 | 27.158 | 475 | 250 | 14 | 19 | 478 | 42 | 435 | 5.51e-30 | 122 |
MS.gene041419.t1 | AT1G08920 | 25.734 | 443 | 271 | 11 | 7 | 434 | 18 | 417 | 4.40e-29 | 119 |
MS.gene041419.t1 | AT1G54730 | 25.313 | 399 | 264 | 7 | 82 | 478 | 74 | 440 | 1.12e-28 | 118 |
MS.gene041419.t1 | AT1G79820 | 25.948 | 343 | 235 | 6 | 87 | 426 | 107 | 433 | 4.45e-28 | 116 |
MS.gene041419.t1 | AT3G05155 | 27.675 | 271 | 182 | 5 | 80 | 348 | 67 | 325 | 1.64e-27 | 113 |
MS.gene041419.t1 | AT3G20460 | 24.812 | 399 | 287 | 7 | 82 | 478 | 95 | 482 | 5.18e-26 | 111 |
MS.gene041419.t1 | AT2G48020 | 27.532 | 316 | 214 | 6 | 60 | 371 | 48 | 352 | 6.18e-25 | 106 |
MS.gene041419.t1 | AT1G54730 | 24.011 | 354 | 250 | 6 | 82 | 433 | 74 | 410 | 9.02e-24 | 103 |
MS.gene041419.t1 | AT1G54730 | 24.011 | 354 | 250 | 6 | 82 | 433 | 74 | 410 | 9.02e-24 | 103 |
MS.gene041419.t1 | AT2G48020 | 27.645 | 293 | 197 | 5 | 60 | 348 | 48 | 329 | 1.52e-23 | 102 |
MS.gene041419.t1 | AT1G54730 | 24.022 | 358 | 238 | 7 | 82 | 437 | 74 | 399 | 6.48e-23 | 101 |
MS.gene041419.t1 | AT3G51490 | 28.151 | 238 | 151 | 4 | 21 | 256 | 4 | 223 | 1.27e-22 | 102 |
MS.gene041419.t1 | AT3G51490 | 28.151 | 238 | 151 | 4 | 21 | 256 | 4 | 223 | 1.86e-22 | 101 |
MS.gene041419.t1 | AT3G51490 | 27.434 | 226 | 136 | 6 | 268 | 476 | 500 | 714 | 2.24e-11 | 67.0 |
MS.gene041419.t1 | AT3G51490 | 33.333 | 159 | 105 | 1 | 100 | 257 | 16 | 174 | 3.86e-22 | 100 |
MS.gene041419.t1 | AT3G51490 | 27.434 | 226 | 136 | 6 | 268 | 476 | 450 | 664 | 2.57e-11 | 66.6 |
MS.gene041419.t1 | AT1G79820 | 23.198 | 444 | 270 | 9 | 45 | 480 | 60 | 440 | 6.67e-22 | 98.6 |
MS.gene041419.t1 | AT1G54730 | 25.651 | 269 | 189 | 4 | 82 | 348 | 74 | 333 | 2.06e-21 | 95.9 |
MS.gene041419.t1 | AT1G79820 | 25.341 | 367 | 204 | 8 | 121 | 480 | 75 | 378 | 3.28e-20 | 92.8 |
MS.gene041419.t1 | AT1G54730 | 25.974 | 231 | 163 | 3 | 82 | 310 | 74 | 298 | 8.29e-19 | 87.8 |
MS.gene041419.t1 | AT1G54730 | 25.974 | 231 | 163 | 3 | 82 | 310 | 74 | 298 | 8.29e-19 | 87.8 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.06e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 494 | 720 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.07e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 484 | 710 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.07e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 484 | 710 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT4G35300 | 34.416 | 154 | 100 | 1 | 105 | 257 | 71 | 224 | 1.07e-18 | 89.7 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 484 | 710 | 4.80e-12 | 68.9 |
MS.gene041419.t1 | AT1G54730 | 25.974 | 231 | 163 | 3 | 82 | 310 | 74 | 298 | 2.97e-18 | 87.0 |
MS.gene041419.t1 | AT1G20840 | 28.409 | 176 | 121 | 2 | 88 | 260 | 52 | 225 | 2.31e-16 | 82.4 |
MS.gene041419.t1 | AT1G20840 | 28.409 | 176 | 121 | 2 | 88 | 260 | 52 | 225 | 2.31e-16 | 82.4 |
MS.gene041419.t1 | AT4G35300 | 30.213 | 235 | 144 | 6 | 254 | 476 | 297 | 523 | 3.85e-12 | 68.9 |
Find 123 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTATGATGTTGGTATTTC+AGG | 0.054343 | 8.2:-12423000 | MS.gene041419:intron |
ACAGCAAATATGATCAATTT+TGG | 0.131467 | 8.2:-12420993 | MS.gene041419:CDS |
CCTCTTTCTATTAAGCTATT+TGG | 0.141536 | 8.2:+12420870 | None:intergenic |
CTTCTATGTACATTCAAGTT+TGG | 0.241655 | 8.2:-12420004 | MS.gene041419:CDS |
CCTGCATTCCAGATTCTTAC+AGG | 0.262609 | 8.2:-12420675 | MS.gene041419:CDS |
GAAAGAGGATCAAAGGAAAA+AGG | 0.279135 | 8.2:-12420855 | MS.gene041419:CDS |
TTCTATGTACATTCAAGTTT+GGG | 0.283851 | 8.2:-12420003 | MS.gene041419:CDS |
TGTCTATTTGTTCTAGCATT+TGG | 0.287094 | 8.2:-12420160 | MS.gene041419:CDS |
ATGGGAATTCCCTTAGTTTC+AGG | 0.290754 | 8.2:+12419920 | None:intergenic |
CTCTACTCCTCAGCCTTGAC+TGG | 0.296714 | 8.2:-12420585 | MS.gene041419:CDS |
TTCTGGTTTAGTTGCATCCT+TGG | 0.316115 | 8.2:-12421738 | MS.gene041419:CDS |
TCTACAATTACAAGGAAATA+TGG | 0.318607 | 8.2:-12421710 | MS.gene041419:CDS |
ATAATCTTGGGGATCAAGTT+TGG | 0.319149 | 8.2:-12420235 | MS.gene041419:CDS |
GCCACTGGAGGGTCTCTCTT+TGG | 0.329650 | 8.2:-12423021 | MS.gene041419:CDS |
AATTTATGCCTGTAAGAATC+TGG | 0.334776 | 8.2:+12420667 | None:intergenic |
TGTGGAAGAAACACTGGTTC+TGG | 0.338021 | 8.2:-12419880 | MS.gene041419:CDS |
GCTTGCATTGTTGCTGCCAC+TGG | 0.339327 | 8.2:-12423036 | MS.gene041419:CDS |
TCATGTTTAGGCCTCCTCTT+AGG | 0.340564 | 8.2:+12421048 | None:intergenic |
GTCATAGTTGCTATAATCTT+GGG | 0.348178 | 8.2:-12420247 | MS.gene041419:CDS |
TTTATTCCTACCTGAAACTA+AGG | 0.356410 | 8.2:-12419930 | MS.gene041419:CDS |
CAACTTGAAACATCATGTTT+AGG | 0.364060 | 8.2:+12421036 | None:intergenic |
CAAACTTGAATGTACATAGA+AGG | 0.365240 | 8.2:+12420005 | None:intergenic |
CTTGGTGTAGGCATTGGCTT+TGG | 0.368905 | 8.2:-12421584 | MS.gene041419:CDS |
CATAATTGCCATCTCTTCAA+TGG | 0.379592 | 8.2:+12419901 | None:intergenic |
TTCTAGCATTTGGATGGTCA+TGG | 0.385963 | 8.2:-12420150 | MS.gene041419:CDS |
GGTCATAGTTGCTATAATCT+TGG | 0.388442 | 8.2:-12420248 | MS.gene041419:CDS |
CACTTGCTTCAACCATATCT+TGG | 0.391695 | 8.2:+12420781 | None:intergenic |
TGTTGGAGGAATATTTATTC+CGG | 0.393957 | 8.2:-12420898 | MS.gene041419:CDS |
AGGCATTGGCTTTGGAGATC+AGG | 0.403549 | 8.2:-12421576 | MS.gene041419:intron |
TATTGCAATAGTAGATAGAT+TGG | 0.403653 | 8.2:-12420532 | MS.gene041419:CDS |
TAGGAATAAAACAACAAATA+TGG | 0.406220 | 8.2:+12419943 | None:intergenic |
CTGTTTCAAAGCATGGGATT+TGG | 0.410040 | 8.2:-12420621 | MS.gene041419:CDS |
CCGGCGGATCGGATTTCTAA+TGG | 0.419820 | 8.2:+12420091 | None:intergenic |
AGAAACACTGGTTCTGGAAA+AGG | 0.420146 | 8.2:-12419874 | MS.gene041419:CDS |
TCTAGCATTTGGATGGTCAT+GGG | 0.424492 | 8.2:-12420149 | MS.gene041419:CDS |
AATCTAGGAATGCTTATCAT+AGG | 0.426805 | 8.2:-12421617 | MS.gene041419:CDS |
AATGCCGCAGCTGCTAATCT+AGG | 0.436237 | 8.2:-12421632 | MS.gene041419:CDS |
TGCATTGTTGCTGCCACTGG+AGG | 0.439962 | 8.2:-12423033 | MS.gene041419:CDS |
ATTGCAATAGTAGATAGATT+GGG | 0.444997 | 8.2:-12420531 | MS.gene041419:CDS |
ATTAAGCTATTTGGAGTCTC+CGG | 0.446163 | 8.2:+12420879 | None:intergenic |
GTCAAAAGGCTATTCATTGT+CGG | 0.447816 | 8.2:-12420197 | MS.gene041419:CDS |
TCCTGTGCTGTTTCAAAGCA+TGG | 0.459270 | 8.2:-12420628 | MS.gene041419:CDS |
AGGCCTCCTCTTAGGTGTGT+TGG | 0.461071 | 8.2:+12421056 | None:intergenic |
TCTACTCCTCAGCCTTGACT+GGG | 0.464447 | 8.2:-12420584 | MS.gene041419:CDS |
TATTTGTTCTAGCATTTGGA+TGG | 0.464844 | 8.2:-12420156 | MS.gene041419:CDS |
TGGTTTAGTTGCATCCTTGG+TGG | 0.468610 | 8.2:-12421735 | MS.gene041419:CDS |
ATTCTGCTTGGTGTAGGCAT+TGG | 0.468854 | 8.2:-12421590 | MS.gene041419:CDS |
TGATGCTGAGTTCCAAGATA+TGG | 0.469727 | 8.2:-12420793 | MS.gene041419:CDS |
TCCTCTTTACTTGTCAGAGA+TGG | 0.473665 | 8.2:-12421081 | MS.gene041419:CDS |
TTTCAAGTATGTTTCGGAAA+GGG | 0.476511 | 8.2:+12420736 | None:intergenic |
TCTCTCTTTGGCTATGATGT+TGG | 0.477677 | 8.2:-12423009 | MS.gene041419:CDS |
CCAAATAGCTTAATAGAAAG+AGG | 0.478282 | 8.2:-12420870 | MS.gene041419:CDS |
AATACAAATGATTATATGCC+AGG | 0.482659 | 8.2:-12420481 | MS.gene041419:intron |
ATAATTGCCATCTCTTCAAT+GGG | 0.482956 | 8.2:+12419902 | None:intergenic |
CATATAGCCATGACCAACTC+TGG | 0.491820 | 8.2:+12420702 | None:intergenic |
TTTCAAGTTGCAACCACACT+TGG | 0.493549 | 8.2:-12421023 | MS.gene041419:CDS |
TTATACTCTGCCCGGCGGAT+CGG | 0.502238 | 8.2:+12420080 | None:intergenic |
AACAACAAATATGGTCATGA+TGG | 0.510817 | 8.2:+12419952 | None:intergenic |
CTGGTATTGCAGCAAGTCCA+AGG | 0.513321 | 8.2:+12420934 | None:intergenic |
CCTGTGCTGTTTCAAAGCAT+GGG | 0.514467 | 8.2:-12420627 | MS.gene041419:CDS |
GACAACCAAGAATTGTCAAA+AGG | 0.516564 | 8.2:-12420211 | MS.gene041419:CDS |
GCATTGTTGCTGCCACTGGA+GGG | 0.517919 | 8.2:-12423032 | MS.gene041419:CDS |
ATCATAGGTCGAATTCTGCT+TGG | 0.518055 | 8.2:-12421602 | MS.gene041419:CDS |
CTAGCATTTGGATGGTCATG+GGG | 0.522190 | 8.2:-12420148 | MS.gene041419:CDS |
CCTGTAAGAATCTGGAATGC+AGG | 0.524255 | 8.2:+12420675 | None:intergenic |
TCTAATGGAAATATCTCACT+TGG | 0.524533 | 8.2:+12420106 | None:intergenic |
CTGTGACTCTCCCATTGTAT+TGG | 0.534635 | 8.2:+12423073 | None:intergenic |
CCATTAGAAATCCGATCCGC+CGG | 0.534705 | 8.2:-12420091 | MS.gene041419:CDS |
AATGGAGGATGGTGTGGCTA+AGG | 0.535801 | 8.2:-12423106 | MS.gene041419:CDS |
AACACACAATATTAAACCAT+GGG | 0.539973 | 8.2:-12420970 | MS.gene041419:CDS |
CTTAATAGAAAGAGGATCAA+AGG | 0.544752 | 8.2:-12420862 | MS.gene041419:CDS |
AAACTTGAATGTACATAGAA+GGG | 0.545350 | 8.2:+12420006 | None:intergenic |
CGGAAAATAAGTATCATAGT+TGG | 0.545811 | 8.2:-12421686 | MS.gene041419:CDS |
AAAATTCAAGAAATGGAGGA+TGG | 0.547705 | 8.2:-12423117 | None:intergenic |
GAACACACAATATTAAACCA+TGG | 0.553536 | 8.2:-12420971 | MS.gene041419:CDS |
GGGAATTCCCATTGAAGAGA+TGG | 0.554177 | 8.2:-12419909 | MS.gene041419:CDS |
AAAATAAGTATCATAGTTGG+TGG | 0.557516 | 8.2:-12421683 | MS.gene041419:CDS |
TTGAAGAGATGGCAATTATG+TGG | 0.559521 | 8.2:-12419898 | MS.gene041419:CDS |
CTTAAGAAGAAAGTCATCCA+TGG | 0.563710 | 8.2:+12421862 | None:intergenic |
CATTAGAAATCCGATCCGCC+GGG | 0.564488 | 8.2:-12420090 | MS.gene041419:CDS |
TGAGGGCAGACCAATACAAT+GGG | 0.567744 | 8.2:-12423083 | MS.gene041419:CDS |
CCAACAGTCATCAAAACAGC+TGG | 0.568259 | 8.2:+12420915 | None:intergenic |
GGTCGAATTCTGCTTGGTGT+AGG | 0.570753 | 8.2:-12421596 | MS.gene041419:CDS |
TGGCAGCAACAATGCAAGCA+AGG | 0.572111 | 8.2:+12423040 | None:intergenic |
TACTCCTCAGCCTTGACTGG+GGG | 0.572171 | 8.2:-12420582 | MS.gene041419:CDS |
TTATTCCTACCTGAAACTAA+GGG | 0.578570 | 8.2:-12419929 | MS.gene041419:CDS |
CGATTATGAAAGTAAAGAGA+AGG | 0.579087 | 8.2:+12420044 | None:intergenic |
CAATTATGTGGAAGAAACAC+TGG | 0.581378 | 8.2:-12419886 | MS.gene041419:CDS |
AGCAACTGTTATACTCTGCC+CGG | 0.582666 | 8.2:+12420072 | None:intergenic |
ATGGCGCCAACACACCTAAG+AGG | 0.583200 | 8.2:-12421062 | MS.gene041419:CDS |
GGATGGTGTGGCTAAGGTGA+GGG | 0.585458 | 8.2:-12423100 | MS.gene041419:CDS |
AACAGGAGGAGTTACTTCCA+TGG | 0.587509 | 8.2:-12421879 | MS.gene041419:intron |
CCCATGCTTTGAAACAGCAC+AGG | 0.589009 | 8.2:+12420627 | None:intergenic |
TATGGTTGAAGCAAGTGAGT+TGG | 0.589496 | 8.2:-12420775 | MS.gene041419:CDS |
TGGTGGCATCTACAATTACA+AGG | 0.590848 | 8.2:-12421718 | MS.gene041419:CDS |
TCAAGAAATGGAGGATGGTG+TGG | 0.591427 | 8.2:-12423112 | None:intergenic |
GCCATCTCTGACAAGTAAAG+AGG | 0.598577 | 8.2:+12421080 | None:intergenic |
CTACTCCTCAGCCTTGACTG+GGG | 0.607119 | 8.2:-12420583 | MS.gene041419:CDS |
AAAACGATACAGGCCAGAGT+TGG | 0.608420 | 8.2:-12420715 | MS.gene041419:CDS |
GAATTCCCTTAGTTTCAGGT+AGG | 0.609247 | 8.2:+12419924 | None:intergenic |
CTTGGGACTGTCCATCCTAG+TGG | 0.610363 | 8.2:+12420124 | None:intergenic |
GTGAGGGCAGACCAATACAA+TGG | 0.610619 | 8.2:-12423084 | MS.gene041419:CDS |
CATTCCTAGATTAGCAGCTG+CGG | 0.611548 | 8.2:+12421628 | None:intergenic |
TAGCATTTGGATGGTCATGG+GGG | 0.615803 | 8.2:-12420147 | MS.gene041419:CDS |
CTAATGGAAATATCTCACTT+GGG | 0.617372 | 8.2:+12420107 | None:intergenic |
TTGCAATAGTAGATAGATTG+GGG | 0.627348 | 8.2:-12420530 | MS.gene041419:CDS |
AGGATGGTGTGGCTAAGGTG+AGG | 0.632860 | 8.2:-12423101 | MS.gene041419:CDS |
TCATAGTTGCTATAATCTTG+GGG | 0.638841 | 8.2:-12420246 | MS.gene041419:CDS |
TGGTATTGCAGCAAGTCCAA+GGG | 0.639473 | 8.2:+12420935 | None:intergenic |
ATACAGGCCAGAGTTGGTCA+TGG | 0.647653 | 8.2:-12420709 | MS.gene041419:CDS |
CAATTACAAGGAAATATGGA+CGG | 0.649249 | 8.2:-12421706 | MS.gene041419:CDS |
AGACCTCTACTCATCAGTGG+TGG | 0.655693 | 8.2:-12420504 | MS.gene041419:CDS |
ATTCCACCACTGATGAGTAG+AGG | 0.659551 | 8.2:+12420501 | None:intergenic |
GCCAAAGAGAGACCCTCCAG+TGG | 0.661881 | 8.2:+12423020 | None:intergenic |
AGAAGACCTCTACTCATCAG+TGG | 0.668084 | 8.2:-12420507 | MS.gene041419:CDS |
ACCAGAAATGTATAAAACAG+AGG | 0.669590 | 8.2:+12421754 | None:intergenic |
GCGCCAACACACCTAAGAGG+AGG | 0.682390 | 8.2:-12421059 | MS.gene041419:CDS |
ACACACAATATTAAACCATG+GGG | 0.688248 | 8.2:-12420969 | MS.gene041419:CDS |
TGAATGTACATAGAAGGGAA+AGG | 0.689207 | 8.2:+12420011 | None:intergenic |
TGTAATTGTAGATGCCACCA+AGG | 0.693146 | 8.2:+12421721 | None:intergenic |
AACTGTTATACTCTGCCCGG+CGG | 0.700887 | 8.2:+12420075 | None:intergenic |
AAACAGAGGTAAATGCTGCG+AGG | 0.727291 | 8.2:+12421768 | None:intergenic |
CACACAATATTAAACCATGG+GGG | 0.765386 | 8.2:-12420968 | MS.gene041419:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTATAAAATCATTAAAATT+TGG | + | chr8.2:12420012-12420031 | None:intergenic | 10.0% |
!! | AATCATTAAAATTTGGATTA+TGG | + | chr8.2:12420005-12420024 | None:intergenic | 15.0% |
!! | ATACTAATAAGATAATAACT+GGG | + | chr8.2:12420525-12420544 | None:intergenic | 15.0% |
!! | TATACTAATAAGATAATAAC+TGG | + | chr8.2:12420526-12420545 | None:intergenic | 15.0% |
!!! | GAATATTTTAAATATCGAAT+TGG | + | chr8.2:12420415-12420434 | None:intergenic | 15.0% |
!!! | TCTTTTTTTATGTAAAACAT+TGG | - | chr8.2:12421459-12421478 | MS.gene041419:intron | 15.0% |
!! | AATTTGATTCAAATCAAGTT+TGG | - | chr8.2:12420730-12420749 | MS.gene041419:CDS | 20.0% |
!! | ATAATACAGTTATACCTTAA+AGG | - | chr8.2:12421802-12421821 | MS.gene041419:CDS | 20.0% |
!! | ATTTGATTCAAATCAAGTTT+GGG | - | chr8.2:12420731-12420750 | MS.gene041419:CDS | 20.0% |
!! | TAAACTCTCAAATTGATTAA+TGG | + | chr8.2:12420906-12420925 | None:intergenic | 20.0% |
!! | TAGGAATAAAACAACAAATA+TGG | + | chr8.2:12423027-12423046 | None:intergenic | 20.0% |
!! | TTCTTACTTTAGTAAATTCT+TGG | + | chr8.2:12420767-12420786 | None:intergenic | 20.0% |
!!! | ATTGCTTTAAAGCATTAAAA+TGG | + | chr8.2:12420328-12420347 | None:intergenic | 20.0% |
!!! | CTAAACTTTTTTCAAGATAA+TGG | + | chr8.2:12420066-12420085 | None:intergenic | 20.0% |
!!! | GTTACATAAGTATTTTCTTT+AGG | + | chr8.2:12421614-12421633 | None:intergenic | 20.0% |
! | AAAATAAGTATCATAGTTGG+TGG | - | chr8.2:12421284-12421303 | MS.gene041419:intron | 25.0% |
! | AAACTTGAATGTACATAGAA+GGG | + | chr8.2:12422964-12422983 | None:intergenic | 25.0% |
! | AACACACAATATTAAACCAT+GGG | - | chr8.2:12421997-12422016 | MS.gene041419:intron | 25.0% |
! | AATACAAATGATTATATGCC+AGG | - | chr8.2:12422486-12422505 | MS.gene041419:intron | 25.0% |
! | ATTGCAATAGTAGATAGATT+GGG | - | chr8.2:12422436-12422455 | MS.gene041419:intron | 25.0% |
! | CAAAAATAACCTAACTGTAA+TGG | - | chr8.2:12420585-12420604 | MS.gene041419:CDS | 25.0% |
! | CAATTGAATGTTTGATACTT+TGG | + | chr8.2:12421548-12421567 | None:intergenic | 25.0% |
! | CATAAGAATCTAAAGGTTAT+AGG | + | chr8.2:12421430-12421449 | None:intergenic | 25.0% |
! | CTCAAATTGATTAATGGAAA+GGG | + | chr8.2:12420900-12420919 | None:intergenic | 25.0% |
! | GTATTTGCATAAGAATCTAA+AGG | + | chr8.2:12421437-12421456 | None:intergenic | 25.0% |
! | GTTAATTTACCATTACAGTT+AGG | + | chr8.2:12420597-12420616 | None:intergenic | 25.0% |
! | TACTGTTCAGTTATTTGAAT+TGG | - | chr8.2:12420284-12420303 | MS.gene041419:intron | 25.0% |
! | TATTGCAATAGTAGATAGAT+TGG | - | chr8.2:12422435-12422454 | MS.gene041419:intron | 25.0% |
! | TCAAATTGATTAATGGAAAG+GGG | + | chr8.2:12420899-12420918 | None:intergenic | 25.0% |
! | TCTACAATTACAAGGAAATA+TGG | - | chr8.2:12421257-12421276 | MS.gene041419:intron | 25.0% |
! | TCTCAAATTGATTAATGGAA+AGG | + | chr8.2:12420901-12420920 | None:intergenic | 25.0% |
! | TGCATTTAAACACTTCAAAT+TGG | + | chr8.2:12420499-12420518 | None:intergenic | 25.0% |
! | TGTTCGTATTATATTTGATG+AGG | + | chr8.2:12420221-12420240 | None:intergenic | 25.0% |
! | TTTCTACCATAAAACATGAA+TGG | + | chr8.2:12422569-12422588 | None:intergenic | 25.0% |
! | TTTGATTCAAATCAAGTTTG+GGG | - | chr8.2:12420732-12420751 | MS.gene041419:CDS | 25.0% |
!! | ACAGCAAATATGATCAATTT+TGG | - | chr8.2:12421974-12421993 | MS.gene041419:intron | 25.0% |
!! | CTAAGATTTTATGGAGTTAA+AGG | - | chr8.2:12421575-12421594 | MS.gene041419:intron | 25.0% |
!! | TGATTTGAGCTAAGATTTTA+TGG | - | chr8.2:12421566-12421585 | MS.gene041419:intron | 25.0% |
!! | TTCTATGTACATTCAAGTTT+GGG | - | chr8.2:12422964-12422983 | MS.gene041419:intron | 25.0% |
!! | TTTTATTCCACAGTATAGAA+GGG | - | chr8.2:12420092-12420111 | MS.gene041419:CDS | 25.0% |
!! | TTTTTATTCCACAGTATAGA+AGG | - | chr8.2:12420091-12420110 | MS.gene041419:CDS | 25.0% |
!!! | ATCGTTTTTCAAGTATGTTT+CGG | + | chr8.2:12422240-12422259 | None:intergenic | 25.0% |
!!! | ATTTTTTGTTTGTACACTGA+GGG | + | chr8.2:12421137-12421156 | None:intergenic | 25.0% |
!!! | TAATTACGTTGTTGATAATG+CGG | - | chr8.2:12421694-12421713 | MS.gene041419:CDS | 25.0% |
!!! | TGCATCAATTTTTCGATAAA+TGG | + | chr8.2:12421056-12421075 | None:intergenic | 25.0% |
AAAAATTGATGCATGTGTCA+TGG | - | chr8.2:12421063-12421082 | MS.gene041419:CDS | 30.0% | |
AAAGAAACATCAGAGGATTA+AGG | + | chr8.2:12421856-12421875 | None:intergenic | 30.0% | |
AACAACAAATATGGTCATGA+TGG | + | chr8.2:12423018-12423037 | None:intergenic | 30.0% | |
AATAACTGAACAGTAGACAA+TGG | + | chr8.2:12420279-12420298 | None:intergenic | 30.0% | |
AATCTAGGAATGCTTATCAT+AGG | - | chr8.2:12421350-12421369 | MS.gene041419:intron | 30.0% | |
AATTTATGCCTGTAAGAATC+TGG | + | chr8.2:12422303-12422322 | None:intergenic | 30.0% | |
ACACACAATATTAAACCATG+GGG | - | chr8.2:12421998-12422017 | MS.gene041419:intron | 30.0% | |
ACATACTTGAAAAACGATAC+AGG | - | chr8.2:12422242-12422261 | MS.gene041419:intron | 30.0% | |
ACCAGAAATGTATAAAACAG+AGG | + | chr8.2:12421216-12421235 | None:intergenic | 30.0% | |
ATAACGTTAACATTCTGCTA+TGG | + | chr8.2:12420686-12420705 | None:intergenic | 30.0% | |
ATAATTGCCATCTCTTCAAT+GGG | + | chr8.2:12423068-12423087 | None:intergenic | 30.0% | |
ATAGAAGAAGCTAAAAGTGA+AGG | + | chr8.2:12420040-12420059 | None:intergenic | 30.0% | |
CAAACTTGAATGTACATAGA+AGG | + | chr8.2:12422965-12422984 | None:intergenic | 30.0% | |
CAAATTGATTAATGGAAAGG+GGG | + | chr8.2:12420898-12420917 | None:intergenic | 30.0% | |
CAACTTGAAACATCATGTTT+AGG | + | chr8.2:12421934-12421953 | None:intergenic | 30.0% | |
CAATTACAAGGAAATATGGA+CGG | - | chr8.2:12421261-12421280 | MS.gene041419:intron | 30.0% | |
CATAAAACATGAATGGTCAA+TGG | + | chr8.2:12422562-12422581 | None:intergenic | 30.0% | |
CCAAATAGCTTAATAGAAAG+AGG | - | chr8.2:12422097-12422116 | MS.gene041419:intron | 30.0% | |
CCTCTTTCTATTAAGCTATT+TGG | + | chr8.2:12422100-12422119 | None:intergenic | 30.0% | |
CGATTATGAAAGTAAAGAGA+AGG | + | chr8.2:12422926-12422945 | None:intergenic | 30.0% | |
CGGAAAATAAGTATCATAGT+TGG | - | chr8.2:12421281-12421300 | MS.gene041419:intron | 30.0% | |
CTAATGGAAATATCTCACTT+GGG | + | chr8.2:12422863-12422882 | None:intergenic | 30.0% | |
CTATCAACGTGAATAAGTTA+CGG | + | chr8.2:12420869-12420888 | None:intergenic | 30.0% | |
CTTAATAGAAAGAGGATCAA+AGG | - | chr8.2:12422105-12422124 | MS.gene041419:intron | 30.0% | |
GAACACACAATATTAAACCA+TGG | - | chr8.2:12421996-12422015 | MS.gene041419:intron | 30.0% | |
GTATAATTAAAACCAGATCC+AGG | - | chr8.2:12420541-12420560 | MS.gene041419:CDS | 30.0% | |
GTCATAGTTGCTATAATCTT+GGG | - | chr8.2:12422720-12422739 | MS.gene041419:intron | 30.0% | |
TAAGTGATTTCTCACCTTTA+AGG | + | chr8.2:12421819-12421838 | None:intergenic | 30.0% | |
TAAGTTACGGACAATAATAG+CGG | + | chr8.2:12420856-12420875 | None:intergenic | 30.0% | |
TATTTGTTCTAGCATTTGGA+TGG | - | chr8.2:12422811-12422830 | MS.gene041419:intron | 30.0% | |
TCATAGTTGCTATAATCTTG+GGG | - | chr8.2:12422721-12422740 | MS.gene041419:intron | 30.0% | |
TCTAATGGAAATATCTCACT+TGG | + | chr8.2:12422864-12422883 | None:intergenic | 30.0% | |
TGACGTAAGACTTAAGAATA+AGG | - | chr8.2:12420157-12420176 | MS.gene041419:CDS | 30.0% | |
TGTCTATTTGTTCTAGCATT+TGG | - | chr8.2:12422807-12422826 | MS.gene041419:intron | 30.0% | |
TGTTGGAGGAATATTTATTC+CGG | - | chr8.2:12422069-12422088 | MS.gene041419:intron | 30.0% | |
TTATTCCTACCTGAAACTAA+GGG | - | chr8.2:12423038-12423057 | MS.gene041419:CDS | 30.0% | |
TTGCAATAGTAGATAGATTG+GGG | - | chr8.2:12422437-12422456 | MS.gene041419:intron | 30.0% | |
TTTATGGAGTTAAAGGATCA+GGG | - | chr8.2:12421582-12421601 | MS.gene041419:CDS | 30.0% | |
TTTATTCCTACCTGAAACTA+AGG | - | chr8.2:12423037-12423056 | MS.gene041419:CDS | 30.0% | |
! | AATAGCCTTTTGACAATTCT+TGG | + | chr8.2:12422764-12422783 | None:intergenic | 30.0% |
! | ACCTCTGTTTTATACATTTC+TGG | - | chr8.2:12421212-12421231 | MS.gene041419:intron | 30.0% |
! | CATTGACCATTCATGTTTTA+TGG | - | chr8.2:12422560-12422579 | MS.gene041419:intron | 30.0% |
! | CTTCTATGTACATTCAAGTT+TGG | - | chr8.2:12422963-12422982 | MS.gene041419:intron | 30.0% |
! | TTTCAAGTATGTTTCGGAAA+GGG | + | chr8.2:12422234-12422253 | None:intergenic | 30.0% |
! | TTTTATGGAGTTAAAGGATC+AGG | - | chr8.2:12421581-12421600 | MS.gene041419:CDS | 30.0% |
!! | AATTACGTTGTTGATAATGC+GGG | - | chr8.2:12421695-12421714 | MS.gene041419:CDS | 30.0% |
!!! | CATTTTTTGTTTGTACACTG+AGG | + | chr8.2:12421138-12421157 | None:intergenic | 30.0% |
!!! | TTTTCAAGTATGTTTCGGAA+AGG | + | chr8.2:12422235-12422254 | None:intergenic | 30.0% |
!!! | TTTTTTGTTTGTACACTGAG+GGG | + | chr8.2:12421136-12421155 | None:intergenic | 30.0% |
AAAGCAATTGAACCTTGACT+CGG | - | chr8.2:12420340-12420359 | MS.gene041419:intron | 35.0% | |
ATAATCTTGGGGATCAAGTT+TGG | - | chr8.2:12422732-12422751 | MS.gene041419:intron | 35.0% | |
ATCAAAGGAAAAAGGAAGGA+AGG | - | chr8.2:12422120-12422139 | MS.gene041419:intron | 35.0% | |
CAATTATGTGGAAGAAACAC+TGG | - | chr8.2:12423081-12423100 | MS.gene041419:CDS | 35.0% | |
CACACAATATTAAACCATGG+GGG | - | chr8.2:12421999-12422018 | MS.gene041419:intron | 35.0% | |
CATAATTGCCATCTCTTCAA+TGG | + | chr8.2:12423069-12423088 | None:intergenic | 35.0% | |
CTTAAGAAGAAAGTCATCCA+TGG | + | chr8.2:12421108-12421127 | None:intergenic | 35.0% | |
GAAAGAGGATCAAAGGAAAA+AGG | - | chr8.2:12422112-12422131 | MS.gene041419:intron | 35.0% | |
GACAACCAAGAATTGTCAAA+AGG | - | chr8.2:12422756-12422775 | MS.gene041419:intron | 35.0% | |
GGTCATAGTTGCTATAATCT+TGG | - | chr8.2:12422719-12422738 | MS.gene041419:intron | 35.0% | |
GTCAAAAGGCTATTCATTGT+CGG | - | chr8.2:12422770-12422789 | MS.gene041419:intron | 35.0% | |
GTGAAATTCAACCTATGTAG+TGG | + | chr8.2:12420137-12420156 | None:intergenic | 35.0% | |
GTGTTAAACATCCACTACAT+AGG | - | chr8.2:12420123-12420142 | MS.gene041419:CDS | 35.0% | |
TAGACAATGGCAGTTAACTT+TGG | + | chr8.2:12420266-12420285 | None:intergenic | 35.0% | |
TAGCATGCAATTTGATGCAA+AGG | + | chr8.2:12420623-12420642 | None:intergenic | 35.0% | |
TGAATGTACATAGAAGGGAA+AGG | + | chr8.2:12422959-12422978 | None:intergenic | 35.0% | |
TTGAAGAGATGGCAATTATG+TGG | - | chr8.2:12423069-12423088 | MS.gene041419:CDS | 35.0% | |
TTGACCTTTGCAAATCATCA+GGG | + | chr8.2:12422627-12422646 | None:intergenic | 35.0% | |
TTTGACCTTTGCAAATCATC+AGG | + | chr8.2:12422628-12422647 | None:intergenic | 35.0% | |
! | ATTAAGCTATTTGGAGTCTC+CGG | + | chr8.2:12422091-12422110 | None:intergenic | 35.0% |
! | CTCTAATTTTTCACATGAGC+AGG | - | chr8.2:12422698-12422717 | MS.gene041419:intron | 35.0% |
! | GAGAGTTTAGTTTAGCACTT+AGG | - | chr8.2:12420917-12420936 | MS.gene041419:CDS | 35.0% |
! | TCCTCTGATGTTTCTTTTGA+AGG | - | chr8.2:12421859-12421878 | MS.gene041419:CDS | 35.0% |
! | TTGTTCCTCTGAGTTTTTCA+AGG | + | chr8.2:12422147-12422166 | None:intergenic | 35.0% |
! | TTTTATGAAGAGAATCTGCC+TGG | + | chr8.2:12420562-12420581 | None:intergenic | 35.0% |
!!! | GAAAGAGAAGCTCACTTTTT+TGG | - | chr8.2:12422585-12422604 | MS.gene041419:intron | 35.0% |
AAGGTCCTTGAAAAACTCAG+AGG | - | chr8.2:12422139-12422158 | MS.gene041419:intron | 40.0% | |
ACAATATTAAACCATGGGGG+TGG | - | chr8.2:12422002-12422021 | MS.gene041419:intron | 40.0% | |
ATCATAGGTCGAATTCTGCT+TGG | - | chr8.2:12421365-12421384 | MS.gene041419:intron | 40.0% | |
ATGCATGTGTCATGGTTAAC+AGG | - | chr8.2:12421071-12421090 | MS.gene041419:CDS | 40.0% | |
ATGGGAATTCCCTTAGTTTC+AGG | + | chr8.2:12423050-12423069 | None:intergenic | 40.0% | |
CAAGAAAGAGTTCTCTAACC+TGG | + | chr8.2:12422507-12422526 | None:intergenic | 40.0% | |
CACTTGCTTCAACCATATCT+TGG | + | chr8.2:12422189-12422208 | None:intergenic | 40.0% | |
CAGGTTAGAGAACTCTTTCT+TGG | - | chr8.2:12422505-12422524 | MS.gene041419:intron | 40.0% | |
CTGTTTCAAAGCATGGGATT+TGG | - | chr8.2:12422346-12422365 | MS.gene041419:intron | 40.0% | |
GAAACATCAGAGGATTAAGG+AGG | + | chr8.2:12421853-12421872 | None:intergenic | 40.0% | |
GAAGAAGCTAAAAGTGAAGG+TGG | + | chr8.2:12420037-12420056 | None:intergenic | 40.0% | |
GAGGATCAAAGGAAAAAGGA+AGG | - | chr8.2:12422116-12422135 | MS.gene041419:intron | 40.0% | |
GCCTTCAAAAGAAACATCAG+AGG | + | chr8.2:12421863-12421882 | None:intergenic | 40.0% | |
GGCTATGATGTTGGTATTTC+AGG | - | chr8.2:12419967-12419986 | MS.gene041419:CDS | 40.0% | |
TATGGTTGAAGCAAGTGAGT+TGG | - | chr8.2:12422192-12422211 | MS.gene041419:intron | 40.0% | |
TCAAATCAAGTTTGGGGACT+AGG | - | chr8.2:12420738-12420757 | MS.gene041419:CDS | 40.0% | |
TCCTCTTTACTTGTCAGAGA+TGG | - | chr8.2:12421886-12421905 | MS.gene041419:intron | 40.0% | |
TCTAGCATTTGGATGGTCAT+GGG | - | chr8.2:12422818-12422837 | MS.gene041419:intron | 40.0% | |
TCTCTCTTTGGCTATGATGT+TGG | - | chr8.2:12419958-12419977 | MS.gene041419:CDS | 40.0% | |
TGATGCTGAGTTCCAAGATA+TGG | - | chr8.2:12422174-12422193 | MS.gene041419:intron | 40.0% | |
TGCTGTAAAAATGCCAAGTG+TGG | + | chr8.2:12421960-12421979 | None:intergenic | 40.0% | |
TGGTGGCATCTACAATTACA+AGG | - | chr8.2:12421249-12421268 | MS.gene041419:intron | 40.0% | |
TGTAATTGTAGATGCCACCA+AGG | + | chr8.2:12421249-12421268 | None:intergenic | 40.0% | |
TTATCCAGCCAGCAAAAAAC+AGG | + | chr8.2:12422995-12423014 | None:intergenic | 40.0% | |
TTCTAGCATTTGGATGGTCA+TGG | - | chr8.2:12422817-12422836 | MS.gene041419:intron | 40.0% | |
! | GAATTCCCTTAGTTTCAGGT+AGG | + | chr8.2:12423046-12423065 | None:intergenic | 40.0% |
! | GGTGGTATCAGTTTTCTCAT+CGG | - | chr8.2:12421302-12421321 | MS.gene041419:intron | 40.0% |
! | GTTTCCCTGATGATTTGCAA+AGG | - | chr8.2:12422620-12422639 | MS.gene041419:intron | 40.0% |
!! | AGAAACACTGGTTCTGGAAA+AGG | - | chr8.2:12423093-12423112 | MS.gene041419:CDS | 40.0% |
!! | TTCTGGTTTAGTTGCATCCT+TGG | - | chr8.2:12421229-12421248 | MS.gene041419:intron | 40.0% |
!! | TTTCAAGTTGCAACCACACT+TGG | - | chr8.2:12421944-12421963 | MS.gene041419:intron | 40.0% |
AAAACGATACAGGCCAGAGT+TGG | - | chr8.2:12422252-12422271 | MS.gene041419:intron | 45.0% | |
AAACAGAGGTAAATGCTGCG+AGG | + | chr8.2:12421202-12421221 | None:intergenic | 45.0% | |
AACAGGAGGAGTTACTTCCA+TGG | - | chr8.2:12421088-12421107 | MS.gene041419:CDS | 45.0% | |
AGAAGACCTCTACTCATCAG+TGG | - | chr8.2:12422460-12422479 | MS.gene041419:intron | 45.0% | |
AGCAACTGTTATACTCTGCC+CGG | + | chr8.2:12422898-12422917 | None:intergenic | 45.0% | |
ATATTAAACCATGGGGGTGG+AGG | - | chr8.2:12422005-12422024 | MS.gene041419:intron | 45.0% | |
ATCAGAGGATTAAGGAGGAG+AGG | + | chr8.2:12421848-12421867 | None:intergenic | 45.0% | |
ATTCCACCACTGATGAGTAG+AGG | + | chr8.2:12422469-12422488 | None:intergenic | 45.0% | |
CATATAGCCATGACCAACTC+TGG | + | chr8.2:12422268-12422287 | None:intergenic | 45.0% | |
CATGTGTCATGGTTAACAGG+AGG | - | chr8.2:12421074-12421093 | MS.gene041419:CDS | 45.0% | |
CATTCCTAGATTAGCAGCTG+CGG | + | chr8.2:12421342-12421361 | None:intergenic | 45.0% | |
CCAACAGTCATCAAAACAGC+TGG | + | chr8.2:12422055-12422074 | None:intergenic | 45.0% | |
CCTGCATTCCAGATTCTTAC+AGG | - | chr8.2:12422292-12422311 | MS.gene041419:intron | 45.0% | |
CTAGCATTTGGATGGTCATG+GGG | - | chr8.2:12422819-12422838 | MS.gene041419:intron | 45.0% | |
CTGTGACTCTCCCATTGTAT+TGG | + | chr8.2:12419897-12419916 | None:intergenic | 45.0% | |
GCCATCTCTGACAAGTAAAG+AGG | + | chr8.2:12421890-12421909 | None:intergenic | 45.0% | |
GGGAATTCCCATTGAAGAGA+TGG | - | chr8.2:12423058-12423077 | MS.gene041419:CDS | 45.0% | |
TAGCATTTGGATGGTCATGG+GGG | - | chr8.2:12422820-12422839 | MS.gene041419:intron | 45.0% | |
TCAGAGGATTAAGGAGGAGA+GGG | + | chr8.2:12421847-12421866 | None:intergenic | 45.0% | |
TCATGTTTAGGCCTCCTCTT+AGG | + | chr8.2:12421922-12421941 | None:intergenic | 45.0% | |
TGAGGGCAGACCAATACAAT+GGG | - | chr8.2:12419884-12419903 | MS.gene041419:CDS | 45.0% | |
TGCACTTCCCTTCTATACTG+TGG | + | chr8.2:12420102-12420121 | None:intergenic | 45.0% | |
TGGTATTGCAGCAAGTCCAA+GGG | + | chr8.2:12422035-12422054 | None:intergenic | 45.0% | |
TGGTTTAGTTGCATCCTTGG+TGG | - | chr8.2:12421232-12421251 | MS.gene041419:intron | 45.0% | |
! | CCTGTAAGAATCTGGAATGC+AGG | + | chr8.2:12422295-12422314 | None:intergenic | 45.0% |
!! | ATTCTGCTTGGTGTAGGCAT+TGG | - | chr8.2:12421377-12421396 | MS.gene041419:intron | 45.0% |
!! | CCTGTGCTGTTTCAAAGCAT+GGG | - | chr8.2:12422340-12422359 | MS.gene041419:intron | 45.0% |
!! | TCCTGTGCTGTTTCAAAGCA+TGG | - | chr8.2:12422339-12422358 | MS.gene041419:intron | 45.0% |
!! | TGTGGAAGAAACACTGGTTC+TGG | - | chr8.2:12423087-12423106 | MS.gene041419:CDS | 45.0% |
!!! | CCAGCTGTTTTGATGACTGT+TGG | - | chr8.2:12422052-12422071 | MS.gene041419:intron | 45.0% |
!!! | GCTGTTTTGATGACTGTTGG+AGG | - | chr8.2:12422055-12422074 | MS.gene041419:intron | 45.0% |
!!! | GGGATCTTCCTGTTTTTTGC+TGG | - | chr8.2:12422984-12423003 | MS.gene041419:intron | 45.0% |
!!! | TCTTCCTGTTTTTTGCTGGC+TGG | - | chr8.2:12422988-12423007 | MS.gene041419:intron | 45.0% |
AACTGTTATACTCTGCCCGG+CGG | + | chr8.2:12422895-12422914 | None:intergenic | 50.0% | |
AATGCCGCAGCTGCTAATCT+AGG | - | chr8.2:12421335-12421354 | MS.gene041419:intron | 50.0% | |
AGACCTCTACTCATCAGTGG+TGG | - | chr8.2:12422463-12422482 | MS.gene041419:intron | 50.0% | |
CAGAGGATTAAGGAGGAGAG+GGG | + | chr8.2:12421846-12421865 | None:intergenic | 50.0% | |
CATTAGAAATCCGATCCGCC+GGG | - | chr8.2:12422877-12422896 | MS.gene041419:intron | 50.0% | |
CCATTAGAAATCCGATCCGC+CGG | - | chr8.2:12422876-12422895 | MS.gene041419:intron | 50.0% | |
CTGGTATTGCAGCAAGTCCA+AGG | + | chr8.2:12422036-12422055 | None:intergenic | 50.0% | |
GAAGAGAATCTGCCTGGATC+TGG | + | chr8.2:12420556-12420575 | None:intergenic | 50.0% | |
GTGAGGGCAGACCAATACAA+TGG | - | chr8.2:12419883-12419902 | MS.gene041419:CDS | 50.0% | |
TCTACTCCTCAGCCTTGACT+GGG | - | chr8.2:12422383-12422402 | MS.gene041419:intron | 50.0% | |
TGGCAGCAACAATGCAAGCA+AGG | + | chr8.2:12419930-12419949 | None:intergenic | 50.0% | |
! | ATACAGGCCAGAGTTGGTCA+TGG | - | chr8.2:12422258-12422277 | MS.gene041419:intron | 50.0% |
!! | AGGCATTGGCTTTGGAGATC+AGG | - | chr8.2:12421391-12421410 | MS.gene041419:intron | 50.0% |
!! | CCCATGCTTTGAAACAGCAC+AGG | + | chr8.2:12422343-12422362 | None:intergenic | 50.0% |
!! | CTTGGTGTAGGCATTGGCTT+TGG | - | chr8.2:12421383-12421402 | MS.gene041419:intron | 50.0% |
!! | GCAATTGAACCTTGACTCGG+AGG | - | chr8.2:12420343-12420362 | MS.gene041419:intron | 50.0% |
!! | GGTCGAATTCTGCTTGGTGT+AGG | - | chr8.2:12421371-12421390 | MS.gene041419:intron | 50.0% |
AGGATGGTGTGGCTAAGGTG+AGG | - | chr8.2:12419866-12419885 | MS.gene041419:CDS | 55.0% | |
AGGCCTCCTCTTAGGTGTGT+TGG | + | chr8.2:12421914-12421933 | None:intergenic | 55.0% | |
ATGGCGCCAACACACCTAAG+AGG | - | chr8.2:12421905-12421924 | MS.gene041419:intron | 55.0% | |
CAGAAGAACTCCCCCAGTCA+AGG | + | chr8.2:12422398-12422417 | None:intergenic | 55.0% | |
CCGGCGGATCGGATTTCTAA+TGG | + | chr8.2:12422879-12422898 | None:intergenic | 55.0% | |
CTACTCCTCAGCCTTGACTG+GGG | - | chr8.2:12422384-12422403 | MS.gene041419:intron | 55.0% | |
CTCTACTCCTCAGCCTTGAC+TGG | - | chr8.2:12422382-12422401 | MS.gene041419:intron | 55.0% | |
CTGACTAGACCTCCGAGTCA+AGG | + | chr8.2:12420355-12420374 | None:intergenic | 55.0% | |
CTTGGGACTGTCCATCCTAG+TGG | + | chr8.2:12422846-12422865 | None:intergenic | 55.0% | |
GCATTGTTGCTGCCACTGGA+GGG | - | chr8.2:12419935-12419954 | MS.gene041419:CDS | 55.0% | |
GCTTGCATTGTTGCTGCCAC+TGG | - | chr8.2:12419931-12419950 | MS.gene041419:CDS | 55.0% | |
GGATGGTGTGGCTAAGGTGA+GGG | - | chr8.2:12419867-12419886 | MS.gene041419:CDS | 55.0% | |
TACTCCTCAGCCTTGACTGG+GGG | - | chr8.2:12422385-12422404 | MS.gene041419:intron | 55.0% | |
TGCATTGTTGCTGCCACTGG+AGG | - | chr8.2:12419934-12419953 | MS.gene041419:CDS | 55.0% | |
TTATACTCTGCCCGGCGGAT+CGG | + | chr8.2:12422890-12422909 | None:intergenic | 55.0% | |
AACTCCCCCAGTCAAGGCTG+AGG | + | chr8.2:12422392-12422411 | None:intergenic | 60.0% | |
GCCAAAGAGAGACCCTCCAG+TGG | + | chr8.2:12419950-12419969 | None:intergenic | 60.0% | |
GCCACTGGAGGGTCTCTCTT+TGG | - | chr8.2:12419946-12419965 | MS.gene041419:CDS | 60.0% | |
GCGCCAACACACCTAAGAGG+AGG | - | chr8.2:12421908-12421927 | MS.gene041419:intron | 60.0% | |
GGATGGTCATGGGGGCCACT+AGG | - | chr8.2:12422828-12422847 | MS.gene041419:intron | 65.0% | |
GGTCATGGGGGCCACTAGGA+TGG | - | chr8.2:12422832-12422851 | MS.gene041419:intron | 65.0% | |
AGGGACAGCCTCCACCCCCA+TGG | + | chr8.2:12422016-12422035 | None:intergenic | 70.0% | |
TGGGGGTGGAGGCTGTCCCT+TGG | - | chr8.2:12422016-12422035 | MS.gene041419:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 12419862 | 12423127 | 12419862 | ID=MS.gene041419 |
chr8.2 | mRNA | 12419862 | 12423127 | 12419862 | ID=MS.gene041419.t1;Parent=MS.gene041419 |
chr8.2 | exon | 12423001 | 12423127 | 12423001 | ID=MS.gene041419.t1.exon1;Parent=MS.gene041419.t1 |
chr8.2 | CDS | 12423001 | 12423127 | 12423001 | ID=cds.MS.gene041419.t1;Parent=MS.gene041419.t1 |
chr8.2 | exon | 12421577 | 12421896 | 12421577 | ID=MS.gene041419.t1.exon2;Parent=MS.gene041419.t1 |
chr8.2 | CDS | 12421577 | 12421896 | 12421577 | ID=cds.MS.gene041419.t1;Parent=MS.gene041419.t1 |
chr8.2 | exon | 12420482 | 12421108 | 12420482 | ID=MS.gene041419.t1.exon3;Parent=MS.gene041419.t1 |
chr8.2 | CDS | 12420482 | 12421108 | 12420482 | ID=cds.MS.gene041419.t1;Parent=MS.gene041419.t1 |
chr8.2 | exon | 12419862 | 12420269 | 12419862 | ID=MS.gene041419.t1.exon4;Parent=MS.gene041419.t1 |
chr8.2 | CDS | 12419862 | 12420269 | 12419862 | ID=cds.MS.gene041419.t1;Parent=MS.gene041419.t1 |
Gene Sequence |
Protein sequence |