Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90717.t1 | XP_024631173.1 | 98 | 452 | 9 | 0 | 1 | 452 | 1 | 452 | 4.20E-260 | 906.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90717.t1 | Q7ZYQ6 | 46.2 | 452 | 236 | 1 | 1 | 452 | 1 | 445 | 6.8e-126 | 452.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90717.t1 | G7I5C2 | 98.0 | 452 | 9 | 0 | 1 | 452 | 1 | 452 | 3.0e-260 | 906.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90717.t1 | MTR_1g022960 | 99.558 | 452 | 2 | 0 | 1 | 452 | 1 | 452 | 0.0 | 942 |
| MS.gene90717.t1 | MTR_4g119620 | 22.671 | 322 | 168 | 10 | 61 | 363 | 22 | 281 | 9.65e-14 | 72.4 |
| MS.gene90717.t1 | MTR_1g072140 | 23.636 | 275 | 171 | 10 | 108 | 367 | 26 | 276 | 2.02e-13 | 71.2 |
| MS.gene90717.t1 | MTR_4g125710 | 28.086 | 324 | 191 | 15 | 61 | 359 | 12 | 318 | 2.58e-12 | 68.2 |
| MS.gene90717.t1 | MTR_3g045130 | 25.000 | 188 | 124 | 4 | 58 | 242 | 348 | 521 | 3.04e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90717.t1 | AT4G28450 | 78.319 | 452 | 98 | 0 | 1 | 452 | 1 | 452 | 0.0 | 767 |
| MS.gene90717.t1 | AT4G02730 | 26.148 | 283 | 161 | 11 | 105 | 367 | 39 | 293 | 2.20e-15 | 77.4 |
| MS.gene90717.t1 | AT2G41500 | 26.540 | 211 | 139 | 5 | 26 | 234 | 300 | 496 | 8.07e-12 | 67.8 |
| MS.gene90717.t1 | AT2G41500 | 26.540 | 211 | 139 | 5 | 26 | 234 | 300 | 496 | 8.07e-12 | 67.8 |
| MS.gene90717.t1 | AT3G49660 | 21.739 | 322 | 175 | 11 | 61 | 367 | 19 | 278 | 7.00e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACCACTGTAAAATTTAT+TGG | 0.094125 | 1.4:-1630762 | None:intergenic |
| TAGTTATGATTCCAGGAAAT+TGG | 0.212222 | 1.4:+1630932 | MS.gene90717:CDS |
| AATGTTCCTGTTGCTTCTTT+TGG | 0.220597 | 1.4:+1629245 | MS.gene90717:CDS |
| GTGCCTGTAGCGTTTCTTTA+TGG | 0.227292 | 1.4:-1632036 | None:intergenic |
| CTGCTGTGACCACCATTATA+AGG | 0.244087 | 1.4:-1631241 | None:intergenic |
| TCCAAGTTGTTCTGATGCTT+TGG | 0.306051 | 1.4:-1631747 | None:intergenic |
| ATGTTTGGAAGAATGCATTT+TGG | 0.313775 | 1.4:+1629398 | MS.gene90717:CDS |
| CCATCCATTGCTCCTATAAA+AGG | 0.319195 | 1.4:-1626796 | None:intergenic |
| GATGGAAGTTATGTAATTTC+AGG | 0.319874 | 1.4:+1631692 | MS.gene90717:CDS |
| TTTGGCTTCACCCAATTTCC+TGG | 0.320487 | 1.4:-1630943 | None:intergenic |
| CCAAGCTATAGAATTGGTTT+TGG | 0.322631 | 1.4:-1630727 | None:intergenic |
| TGTTTGCAGATATTCGTCTT+TGG | 0.331813 | 1.4:+1628645 | MS.gene90717:intron |
| CCCCATACGAAACTATTTAC+TGG | 0.333180 | 1.4:-1629705 | None:intergenic |
| GCTGAGCTTGCTAAGAGATT+TGG | 0.339438 | 1.4:-1629768 | None:intergenic |
| GTTTGCAGATATTCGTCTTT+GGG | 0.344881 | 1.4:+1628646 | MS.gene90717:intron |
| TTCCAAACATAAACACTTGC+CGG | 0.349139 | 1.4:-1629385 | None:intergenic |
| TTCTCTTGAGGACGAAGAAT+TGG | 0.350486 | 1.4:-1626602 | None:intergenic |
| GGCTTTGTTGTAACACTCCC+TGG | 0.358324 | 1.4:-1632188 | None:intergenic |
| GTGATCTTTATGAACACATT+TGG | 0.359886 | 1.4:-1630961 | None:intergenic |
| GTAAAATTTATTGGTTCCAT+TGG | 0.374678 | 1.4:-1630753 | None:intergenic |
| GTGGCGCTCAAGTAGATATA+TGG | 0.375359 | 1.4:+1629566 | MS.gene90717:CDS |
| AGAACGAAGCCAAGACCTTC+AGG | 0.381853 | 1.4:+1626438 | MS.gene90717:CDS |
| AGCCGGCAAGTGTTTATGTT+TGG | 0.389553 | 1.4:+1629383 | MS.gene90717:intron |
| CGCACAGCACCTTGGTGTCC+AGG | 0.391819 | 1.4:-1629044 | None:intergenic |
| AAAGAAGAAGCCTTGTATAT+TGG | 0.402396 | 1.4:-1632104 | None:intergenic |
| GCATAAATCTGTATGATTTA+CGG | 0.406292 | 1.4:+1630412 | MS.gene90717:CDS |
| TGGATTCCAAGCTATAGAAT+TGG | 0.408247 | 1.4:-1630733 | None:intergenic |
| GCTAAGAGATTTGGTTCTCC+TGG | 0.410192 | 1.4:-1629759 | None:intergenic |
| ACTGCTATAGTTATGATTCC+AGG | 0.417229 | 1.4:+1630925 | MS.gene90717:CDS |
| ATGATACTAACCTCAGACTT+TGG | 0.421940 | 1.4:+1631720 | MS.gene90717:CDS |
| GAAGAATTGGATCGTAATTA+CGG | 0.423302 | 1.4:-1626589 | None:intergenic |
| AGTTATGATTCCAGGAAATT+GGG | 0.427023 | 1.4:+1630933 | MS.gene90717:CDS |
| AATGAATTACCTGAAGGTCT+TGG | 0.427414 | 1.4:-1626447 | None:intergenic |
| AGGAAAGCTCACAGTGCCCC+AGG | 0.436680 | 1.4:+1632170 | MS.gene90717:CDS |
| GGCCATCTGTCGATGCTGTC+AGG | 0.439615 | 1.4:-1629070 | None:intergenic |
| GTGAGAATCTTCCCTTATAA+TGG | 0.443627 | 1.4:+1631229 | MS.gene90717:CDS |
| TGCTGTGACCACCATTATAA+GGG | 0.445472 | 1.4:-1631240 | None:intergenic |
| GAAGCCTTGTATATTGGTCT+TGG | 0.453460 | 1.4:-1632098 | None:intergenic |
| TAGATATATGGAATCACAAC+AGG | 0.461587 | 1.4:+1629578 | MS.gene90717:CDS |
| TGTAGATGCAATTTCGTGTA+TGG | 0.462793 | 1.4:+1626822 | MS.gene90717:CDS |
| TTATGTTCAGTGTCAGACTT+TGG | 0.466742 | 1.4:+1629222 | MS.gene90717:intron |
| CCAAAACCAATTCTATAGCT+TGG | 0.466953 | 1.4:+1630727 | MS.gene90717:CDS |
| CTTGCAATACGGTTAACTTC+AGG | 0.470144 | 1.4:-1632062 | None:intergenic |
| TGCTCTCAATGCAGTGAAGT+TGG | 0.475144 | 1.4:+1626643 | MS.gene90717:CDS |
| GATATTGACTACTCACCAAC+TGG | 0.479569 | 1.4:+1631084 | MS.gene90717:CDS |
| ATTTCTGTCCGCTTTAATCC+AGG | 0.483582 | 1.4:+1629741 | MS.gene90717:CDS |
| TGTGTCAAGTTCAGCGGCGA+TGG | 0.483997 | 1.4:+1631674 | MS.gene90717:CDS |
| AACTGTTCTATCATAAGATC+CGG | 0.487930 | 1.4:-1631121 | None:intergenic |
| AGCCAGTAAATAGTTTCGTA+TGG | 0.495618 | 1.4:+1629703 | MS.gene90717:CDS |
| AGAGATATTCTCTGGTTCAA+TGG | 0.495912 | 1.4:+1626867 | MS.gene90717:CDS |
| GAGTCCCCAAAAGAAGCAAC+AGG | 0.502374 | 1.4:-1629251 | None:intergenic |
| CAATGCAGTGAAGTTGGATA+AGG | 0.505068 | 1.4:+1626649 | MS.gene90717:CDS |
| CAGTTGAAAGAGATATTCTC+TGG | 0.506124 | 1.4:+1626859 | MS.gene90717:CDS |
| CAAAGTTATATCACGCTCTA+CGG | 0.510796 | 1.4:+1626402 | MS.gene90717:CDS |
| GCTTTGTTGTAACACTCCCT+GGG | 0.513233 | 1.4:-1632187 | None:intergenic |
| GGCCGCATTCTTGTTTCATG+TGG | 0.514047 | 1.4:+1629089 | MS.gene90717:CDS |
| CAAAATGCTCGCCGTCCCAC+TGG | 0.516418 | 1.4:-1629537 | None:intergenic |
| ATATTCTCTGGTTCAATGGA+TGG | 0.517447 | 1.4:+1626871 | MS.gene90717:CDS |
| GCCAGTAAATAGTTTCGTAT+GGG | 0.521326 | 1.4:+1629704 | MS.gene90717:CDS |
| AGTAAGGAAAATGATAATGA+TGG | 0.524836 | 1.4:+1630446 | MS.gene90717:CDS |
| CTCAATTAAGACAACTATTG+AGG | 0.528173 | 1.4:+1629280 | MS.gene90717:CDS |
| CGGACTGTTTGTCAGTTCCC+TGG | 0.530233 | 1.4:+1629026 | MS.gene90717:CDS |
| TCAGGCCTCGCACAGCACCT+TGG | 0.533050 | 1.4:-1629052 | None:intergenic |
| ATTATCAGAGAAGTTGAGTG+AGG | 0.539555 | 1.4:+1632227 | MS.gene90717:CDS |
| TTCTATAGCTTGGAATCCAA+TGG | 0.540411 | 1.4:+1630737 | MS.gene90717:CDS |
| AGTGTCTATGCCTTGCAATA+CGG | 0.542864 | 1.4:-1632073 | None:intergenic |
| ATATCTCTTTCAACTGACTA+GGG | 0.544313 | 1.4:-1626852 | None:intergenic |
| TATTCCACCGCCTTCTCTTG+AGG | 0.547207 | 1.4:-1626614 | None:intergenic |
| GGCCTGACAGCATCGACAGA+TGG | 0.550525 | 1.4:+1629068 | MS.gene90717:CDS |
| TTTCGTATGGGGATCAGATA+CGG | 0.552827 | 1.4:+1629716 | MS.gene90717:CDS |
| GGCATGCAGGCAAATGAAGA+TGG | 0.559590 | 1.4:+1630900 | MS.gene90717:intron |
| AATATCTCTTTCAACTGACT+AGG | 0.561363 | 1.4:-1626853 | None:intergenic |
| CTTTGGCCTTCCAAAGTCTG+AGG | 0.561645 | 1.4:-1631730 | None:intergenic |
| GCCAAAGCATCAGAACAACT+TGG | 0.571500 | 1.4:+1631746 | MS.gene90717:CDS |
| TACGGATGGATACCCCAGTA+AGG | 0.575067 | 1.4:+1630430 | MS.gene90717:CDS |
| GCACAGCACCTTGGTGTCCA+GGG | 0.584408 | 1.4:-1629043 | None:intergenic |
| GGACACCAAGGTGCTGTGCG+AGG | 0.590155 | 1.4:+1629047 | MS.gene90717:CDS |
| TACTAACCTCAGACTTTGGA+AGG | 0.594251 | 1.4:+1631724 | MS.gene90717:CDS |
| AGGCCATAAAGAAACGCTAC+AGG | 0.594578 | 1.4:+1632033 | MS.gene90717:CDS |
| CTTACCAAGACCAATATACA+AGG | 0.596333 | 1.4:+1632094 | MS.gene90717:CDS |
| TAGCGCTGTTGATCACCAGT+GGG | 0.597150 | 1.4:+1629522 | MS.gene90717:intron |
| TTAGCGCTGTTGATCACCAG+TGG | 0.600322 | 1.4:+1629521 | MS.gene90717:intron |
| TGTCAGTTCCCTGGACACCA+AGG | 0.601209 | 1.4:+1629035 | MS.gene90717:CDS |
| GGAAAGCTCACAGTGCCCCA+GGG | 0.606954 | 1.4:+1632171 | MS.gene90717:CDS |
| AATTCTTCGTCCTCAAGAGA+AGG | 0.607045 | 1.4:+1626604 | MS.gene90717:CDS |
| CTGAAGTTAACCGTATTGCA+AGG | 0.608965 | 1.4:+1632063 | MS.gene90717:CDS |
| GTGTTACAACAAAGCCGTTG+CGG | 0.611613 | 1.4:+1632195 | MS.gene90717:CDS |
| ATCTCTTAGCAAGCTCAGCT+AGG | 0.612178 | 1.4:+1629772 | MS.gene90717:CDS |
| ATCATACTAAAAGAATGCAA+AGG | 0.613308 | 1.4:+1631272 | MS.gene90717:CDS |
| TCGTCCTCAAGAGAAGGCGG+TGG | 0.613718 | 1.4:+1626610 | MS.gene90717:CDS |
| GTGACAAATTCTCGACCAGT+TGG | 0.617530 | 1.4:-1631099 | None:intergenic |
| TTGGTTCTCCTGGATTAAAG+CGG | 0.621177 | 1.4:-1629749 | None:intergenic |
| GTCTTTGGGATATAGCTGCT+AGG | 0.627694 | 1.4:+1628660 | MS.gene90717:CDS |
| TGATGCCACAGGTTCTTCCG+AGG | 0.628636 | 1.4:+1631985 | MS.gene90717:intron |
| AGAATCTTCCCTTATAATGG+TGG | 0.629250 | 1.4:+1631232 | MS.gene90717:CDS |
| AAATCTGTATGATTTACGGA+TGG | 0.631713 | 1.4:+1630416 | MS.gene90717:CDS |
| ATCTACTTGAGCGCCACCTG+TGG | 0.634797 | 1.4:-1629560 | None:intergenic |
| GATGCCACAGGTTCTTCCGA+GGG | 0.636446 | 1.4:+1631986 | MS.gene90717:intron |
| CCAGTAAATAGTTTCGTATG+GGG | 0.638122 | 1.4:+1629705 | MS.gene90717:CDS |
| TTCTCTGGTTCAATGGATGG+AGG | 0.642148 | 1.4:+1626874 | MS.gene90717:CDS |
| GCTGTTGATCACCAGTGGGA+CGG | 0.644849 | 1.4:+1629526 | MS.gene90717:CDS |
| GTATTCTGTGTCAAGTTCAG+CGG | 0.646929 | 1.4:+1631668 | MS.gene90717:CDS |
| ACTGGTCGAGAATTTGTCAC+CGG | 0.649767 | 1.4:+1631102 | MS.gene90717:CDS |
| AGTTATATCACGCTCTACGG+AGG | 0.657642 | 1.4:+1626405 | MS.gene90717:CDS |
| CAATACGGTTAACTTCAGGA+AGG | 0.681036 | 1.4:-1632058 | None:intergenic |
| TCTTCGTCCTCAAGAGAAGG+CGG | 0.682148 | 1.4:+1626607 | MS.gene90717:CDS |
| TTCCACATGAAACAAGAATG+CGG | 0.692579 | 1.4:-1629091 | None:intergenic |
| CTTTGTTGTAACACTCCCTG+GGG | 0.701621 | 1.4:-1632186 | None:intergenic |
| GAAGAAGCATGACTATCACG+AGG | 0.736007 | 1.4:+1632013 | MS.gene90717:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATAAGAAATTAGAA+TGG | + | chr1.4:1627295-1627314 | MS.gene90717:intron | 10.0% |
| !! | TAATCAAAAGAAAAATAATA+AGG | - | chr1.4:1630566-1630585 | None:intergenic | 10.0% |
| !!! | AATTATGATATATTTTAACT+GGG | + | chr1.4:1627745-1627764 | MS.gene90717:intron | 10.0% |
| !!! | TAATTATGATATATTTTAAC+TGG | + | chr1.4:1627744-1627763 | MS.gene90717:intron | 10.0% |
| !!! | TAGTTTTATTTAGTTAAATA+TGG | + | chr1.4:1630192-1630211 | MS.gene90717:intron | 10.0% |
| !!! | TTTTTTGTAAAATTTTCTTT+TGG | + | chr1.4:1629326-1629345 | MS.gene90717:intron | 10.0% |
| !!! | TTTTTTTGTTTTTTTTTTTG+TGG | + | chr1.4:1626755-1626774 | MS.gene90717:intron | 10.0% |
| !! | AATTTACCAAAATTAAAGTT+TGG | - | chr1.4:1627883-1627902 | None:intergenic | 15.0% |
| !! | ATTATATAATTAACACTAAG+GGG | + | chr1.4:1629841-1629860 | MS.gene90717:intron | 15.0% |
| !! | GATTATATAATTAACACTAA+GGG | + | chr1.4:1629840-1629859 | MS.gene90717:intron | 15.0% |
| !! | TAAGAATATTTCAATAAACT+CGG | - | chr1.4:1631411-1631430 | None:intergenic | 15.0% |
| !!! | ACAAGATTATTTTAGTTTAA+AGG | + | chr1.4:1627705-1627724 | MS.gene90717:intron | 15.0% |
| !!! | ACAATTTTCAAAATATAAGT+TGG | + | chr1.4:1627632-1627651 | MS.gene90717:intron | 15.0% |
| !!! | ATATGTATAAACTATTTCTA+TGG | + | chr1.4:1626951-1626970 | MS.gene90717:intron | 15.0% |
| !!! | ATTATCATTAGTTTAAATCA+TGG | + | chr1.4:1630485-1630504 | MS.gene90717:intron | 15.0% |
| !!! | CATTTAAAATTGAAAGAAAA+AGG | - | chr1.4:1628695-1628714 | None:intergenic | 15.0% |
| !!! | GAACTGATTTATATTTATTT+TGG | + | chr1.4:1630263-1630282 | MS.gene90717:intron | 15.0% |
| !!! | GATTGATTTAAAATGATATT+TGG | + | chr1.4:1627272-1627291 | MS.gene90717:intron | 15.0% |
| !!! | TAATATTGTCATTTTGTTTA+TGG | + | chr1.4:1628995-1629014 | MS.gene90717:intron | 15.0% |
| !!! | TTTTAAATCAATCTATCAAA+TGG | - | chr1.4:1627265-1627284 | None:intergenic | 15.0% |
| !! | AAAAATTTAGAAGAGAAGAT+AGG | + | chr1.4:1627226-1627245 | MS.gene90717:intron | 20.0% |
| !! | AAAATTTAGAAGAGAAGATA+GGG | + | chr1.4:1627227-1627246 | MS.gene90717:intron | 20.0% |
| !! | AATATTCTTATCATGCTTTA+TGG | + | chr1.4:1631421-1631440 | MS.gene90717:intron | 20.0% |
| !! | ACGCTAAAAAAAAAACAAAA+GGG | - | chr1.4:1626564-1626583 | None:intergenic | 20.0% |
| !! | ACTCACGAATATAATATATT+TGG | - | chr1.4:1630673-1630692 | None:intergenic | 20.0% |
| !! | AGCTTATTTAATTAGACTTT+AGG | + | chr1.4:1628910-1628929 | MS.gene90717:intron | 20.0% |
| !! | AGGAAGGAATTTATTTAATA+AGG | + | chr1.4:1630241-1630260 | MS.gene90717:intron | 20.0% |
| !! | AGTAAAAGAAAAACAAAAAG+AGG | - | chr1.4:1629138-1629157 | None:intergenic | 20.0% |
| !! | ATAAGAAAAATATTGGTGAA+TGG | + | chr1.4:1628878-1628897 | MS.gene90717:intron | 20.0% |
| !! | ATAAGAAATTAGAATGGTTA+TGG | + | chr1.4:1627301-1627320 | MS.gene90717:intron | 20.0% |
| !! | ATGTTAATCATCTTACTTAT+AGG | + | chr1.4:1630221-1630240 | MS.gene90717:intron | 20.0% |
| !! | ATTAACAATTTCTCATTTGT+AGG | + | chr1.4:1631207-1631226 | MS.gene90717:intron | 20.0% |
| !! | ATTCACAATAAAAAACACAT+AGG | - | chr1.4:1626688-1626707 | None:intergenic | 20.0% |
| !! | CCAGTAAAAAAAAAATGTTT+CGG | - | chr1.4:1628193-1628212 | None:intergenic | 20.0% |
| !! | GGATTATATAATTAACACTA+AGG | + | chr1.4:1629839-1629858 | MS.gene90717:intron | 20.0% |
| !! | GTGAATATAGTAGTTTAAAA+CGG | - | chr1.4:1628611-1628630 | None:intergenic | 20.0% |
| !! | GTTATGGATAAGAAAAATAT+TGG | + | chr1.4:1628871-1628890 | MS.gene90717:intron | 20.0% |
| !! | TAAAGAATCTTCAAATTACA+GGG | + | chr1.4:1628161-1628180 | MS.gene90717:intron | 20.0% |
| !! | TAGTGATATTTAAATTCTTG+TGG | + | chr1.4:1630865-1630884 | MS.gene90717:intron | 20.0% |
| !! | TATTATTAAACTGATAGTTG+AGG | + | chr1.4:1630539-1630558 | MS.gene90717:intron | 20.0% |
| !! | TCTAGTTAACATTTCTTTAA+AGG | + | chr1.4:1627913-1627932 | MS.gene90717:intron | 20.0% |
| !! | TGCTAAAAATAGAATAAACA+CGG | + | chr1.4:1629817-1629836 | MS.gene90717:intron | 20.0% |
| !! | TTCACAATAAAAAACACATA+GGG | - | chr1.4:1626687-1626706 | None:intergenic | 20.0% |
| !!! | AAACATTTTTTTTTTACTGG+GGG | + | chr1.4:1628193-1628212 | MS.gene90717:intron | 20.0% |
| !!! | AATACATCAAACTTTTGTTA+TGG | + | chr1.4:1628855-1628874 | MS.gene90717:intron | 20.0% |
| !!! | ACTTTTATCATATAAGAAAC+AGG | - | chr1.4:1628828-1628847 | None:intergenic | 20.0% |
| !!! | ATCTAAACAATTTTGTTTAC+AGG | - | chr1.4:1627988-1628007 | None:intergenic | 20.0% |
| !!! | ATTTGAAGATTCTTTAGTTT+TGG | - | chr1.4:1628157-1628176 | None:intergenic | 20.0% |
| !!! | CGAAACATTTTTTTTTTACT+GGG | + | chr1.4:1628191-1628210 | MS.gene90717:intron | 20.0% |
| !!! | GAAACATTTTTTTTTTACTG+GGG | + | chr1.4:1628192-1628211 | MS.gene90717:intron | 20.0% |
| !!! | TATTGTGAATATGGTTTTAT+AGG | + | chr1.4:1626698-1626717 | MS.gene90717:intron | 20.0% |
| !!! | TGTGTTTTTTATTGTGAATA+TGG | + | chr1.4:1626689-1626708 | MS.gene90717:intron | 20.0% |
| !!! | TTAGCAATTTTAAATGTTCT+GGG | + | chr1.4:1628766-1628785 | MS.gene90717:intron | 20.0% |
| !!! | TTGTTATTCAATTAGTTAGT+TGG | + | chr1.4:1631888-1631907 | MS.gene90717:intron | 20.0% |
| !!! | TTTAACCTCTAAATGTTTTA+TGG | - | chr1.4:1628436-1628455 | None:intergenic | 20.0% |
| !!! | TTTGAAGATTCTTTAGTTTT+GGG | - | chr1.4:1628156-1628175 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATGGAAAAAAGA+CGG | + | chr1.4:1629006-1629025 | MS.gene90717:intron | 20.0% |
| !!! | TTTTTATGCTTACAAAACAT+TGG | + | chr1.4:1629479-1629498 | MS.gene90717:intron | 20.0% |
| ! | AAAATCGATGATATGATAGA+GGG | - | chr1.4:1628111-1628130 | None:intergenic | 25.0% |
| ! | AAACTGTCATCTATTAATTG+TGG | + | chr1.4:1631823-1631842 | MS.gene90717:intron | 25.0% |
| ! | AAAGAAAAACAAAAAGAGGT+AGG | - | chr1.4:1629134-1629153 | None:intergenic | 25.0% |
| ! | AACAACCATAAAACATTTAG+AGG | + | chr1.4:1628428-1628447 | MS.gene90717:intron | 25.0% |
| ! | AATGCTACAAAGTTAAAGAA+AGG | - | chr1.4:1628265-1628284 | None:intergenic | 25.0% |
| ! | AATTGAAGCAACATGATTAA+AGG | - | chr1.4:1627153-1627172 | None:intergenic | 25.0% |
| ! | ACGTCAAATTTCAAAATTGA+AGG | + | chr1.4:1628051-1628070 | MS.gene90717:intron | 25.0% |
| ! | AGTAAGAAGATAAAATGACA+AGG | - | chr1.4:1631170-1631189 | None:intergenic | 25.0% |
| ! | ATCAGTTAACTATTAGATAG+AGG | + | chr1.4:1627825-1627844 | MS.gene90717:intron | 25.0% |
| ! | ATCATACTAAAAGAATGCAA+AGG | + | chr1.4:1631272-1631291 | MS.gene90717:CDS | 25.0% |
| ! | ATGAAGAGGTTTAACAATAA+AGG | - | chr1.4:1626493-1626512 | None:intergenic | 25.0% |
| ! | ATGAATTAAGAAGAATGAAG+AGG | - | chr1.4:1626507-1626526 | None:intergenic | 25.0% |
| ! | ATGCTACAAAGTTAAAGAAA+GGG | - | chr1.4:1628264-1628283 | None:intergenic | 25.0% |
| ! | ATTAAATCGTTCATCCAAAA+AGG | - | chr1.4:1626924-1626943 | None:intergenic | 25.0% |
| ! | ATTGAAGCAACATGATTAAA+GGG | - | chr1.4:1627152-1627171 | None:intergenic | 25.0% |
| ! | CAAAGAATCTTCAAATTACA+GGG | - | chr1.4:1628016-1628035 | None:intergenic | 25.0% |
| ! | CACGCTAAAAAAAAAACAAA+AGG | - | chr1.4:1626565-1626584 | None:intergenic | 25.0% |
| ! | CTAAAGAATCTTCAAATTAC+AGG | + | chr1.4:1628160-1628179 | MS.gene90717:intron | 25.0% |
| ! | CTTACCACTGTAAAATTTAT+TGG | - | chr1.4:1630765-1630784 | None:intergenic | 25.0% |
| ! | GACAGTTGTTTAAACTATAA+TGG | + | chr1.4:1628372-1628391 | MS.gene90717:intron | 25.0% |
| ! | GCATAAATCTGTATGATTTA+CGG | + | chr1.4:1630412-1630431 | MS.gene90717:CDS | 25.0% |
| ! | GCTAAAAATAGAATAAACAC+GGG | + | chr1.4:1629818-1629837 | MS.gene90717:intron | 25.0% |
| ! | TAAAATAATCTTGTTCTTCG+TGG | - | chr1.4:1627699-1627718 | None:intergenic | 25.0% |
| ! | TAATCATCTTACTTATAGGA+AGG | + | chr1.4:1630225-1630244 | MS.gene90717:intron | 25.0% |
| ! | TAATTAAATAAGCTGATGCA+TGG | - | chr1.4:1628904-1628923 | None:intergenic | 25.0% |
| ! | TATTGTTGTACACTTGATAT+AGG | + | chr1.4:1627198-1627217 | MS.gene90717:intron | 25.0% |
| ! | TGAACTCCTGAAATTAAAAT+CGG | - | chr1.4:1627662-1627681 | None:intergenic | 25.0% |
| ! | TGAAGAGGTTTAACAATAAA+GGG | - | chr1.4:1626492-1626511 | None:intergenic | 25.0% |
| ! | TTTCATGCTTATTATGAAAG+TGG | + | chr1.4:1628350-1628369 | MS.gene90717:intron | 25.0% |
| !! | AATCTTTATCTTTTGTACAC+AGG | + | chr1.4:1631645-1631664 | MS.gene90717:intron | 25.0% |
| !! | AGTAAGGAAAATGATAATGA+TGG | + | chr1.4:1630446-1630465 | MS.gene90717:CDS | 25.0% |
| !! | ATCATTATCATTTTCCTTAC+TGG | - | chr1.4:1630447-1630466 | None:intergenic | 25.0% |
| !! | ATCTTTATCTTTTGTACACA+GGG | + | chr1.4:1631646-1631665 | MS.gene90717:intron | 25.0% |
| !! | ATTTTTGCTAGACCTTTTAT+AGG | + | chr1.4:1626784-1626803 | MS.gene90717:CDS | 25.0% |
| !! | CTTAGCAATTTTAAATGTTC+TGG | + | chr1.4:1628765-1628784 | MS.gene90717:intron | 25.0% |
| !! | TCACTCAAGAAAAAGAATTT+TGG | - | chr1.4:1627785-1627804 | None:intergenic | 25.0% |
| !! | TCATTATCATTTTCCTTACT+GGG | - | chr1.4:1630446-1630465 | None:intergenic | 25.0% |
| !! | TTCTTGTGGACAAATTTTAT+TGG | + | chr1.4:1630879-1630898 | MS.gene90717:intron | 25.0% |
| !! | TTTTGATCTACTACTTACAT+TGG | + | chr1.4:1630316-1630335 | MS.gene90717:intron | 25.0% |
| !! | TTTTTCTGCTTCATATCTTT+TGG | + | chr1.4:1630639-1630658 | MS.gene90717:intron | 25.0% |
| !!! | AAACAATTTTGTTTACAGGA+GGG | - | chr1.4:1627984-1628003 | None:intergenic | 25.0% |
| !!! | AAACAGCCAAACTTTAATTT+TGG | + | chr1.4:1627874-1627893 | MS.gene90717:intron | 25.0% |
| !!! | ATTTGAAGATTCTTTGGTTT+TGG | + | chr1.4:1628020-1628039 | MS.gene90717:intron | 25.0% |
| !!! | CCGAAACATTTTTTTTTTAC+TGG | + | chr1.4:1628190-1628209 | MS.gene90717:intron | 25.0% |
| !!! | CTTTTGATTATACATATCCT+TGG | + | chr1.4:1630576-1630595 | MS.gene90717:intron | 25.0% |
| !!! | GTAAAATTTATTGGTTCCAT+TGG | - | chr1.4:1630756-1630775 | None:intergenic | 25.0% |
| !!! | TAAACAATTTTGTTTACAGG+AGG | - | chr1.4:1627985-1628004 | None:intergenic | 25.0% |
| !!! | TATTTTATTTTGTGTGTGTG+TGG | - | chr1.4:1631804-1631823 | None:intergenic | 25.0% |
| !!! | TGAATATGGTTTTATAGGAT+AGG | + | chr1.4:1626703-1626722 | MS.gene90717:intron | 25.0% |
| !!! | TTTTGAAATTTGACGTCATA+AGG | - | chr1.4:1628047-1628066 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTTTTCAGTGAC+AGG | + | chr1.4:1630388-1630407 | MS.gene90717:intron | 25.0% |
| AAATCTGTATGATTTACGGA+TGG | + | chr1.4:1630416-1630435 | MS.gene90717:CDS | 30.0% | |
| AACCAAGACTAACTAGATTA+AGG | - | chr1.4:1630166-1630185 | None:intergenic | 30.0% | |
| AACTGTTCTATCATAAGATC+CGG | - | chr1.4:1631124-1631143 | None:intergenic | 30.0% | |
| AAGGTTATAATGAAGTCCAA+GGG | - | chr1.4:1631151-1631170 | None:intergenic | 30.0% | |
| AATATCTCTTTCAACTGACT+AGG | - | chr1.4:1626856-1626875 | None:intergenic | 30.0% | |
| AATGGTTATGGTTATGCTAA+TGG | + | chr1.4:1627313-1627332 | MS.gene90717:intron | 30.0% | |
| AATTAAGACAACTATTGAGG+TGG | + | chr1.4:1629283-1629302 | MS.gene90717:intron | 30.0% | |
| AATTAGACTTTAGGCAATGA+TGG | + | chr1.4:1628919-1628938 | MS.gene90717:intron | 30.0% | |
| ACTAGGGAAAATAACTGAAA+GGG | - | chr1.4:1630046-1630065 | None:intergenic | 30.0% | |
| AGTTATGATTCCAGGAAATT+GGG | + | chr1.4:1630933-1630952 | MS.gene90717:CDS | 30.0% | |
| ATAGGGTGGTTATTTATTTC+TGG | + | chr1.4:1629427-1629446 | MS.gene90717:intron | 30.0% | |
| ATATAACCTCCTTGTAGAAA+TGG | + | chr1.4:1629912-1629931 | MS.gene90717:intron | 30.0% | |
| ATATCTCTTTCAACTGACTA+GGG | - | chr1.4:1626855-1626874 | None:intergenic | 30.0% | |
| ATGGTTATGGTTATGCTAAT+GGG | + | chr1.4:1627314-1627333 | MS.gene90717:intron | 30.0% | |
| ATTAAGGTCAATGTTCTCAA+TGG | - | chr1.4:1630150-1630169 | None:intergenic | 30.0% | |
| CAAAATCGATGATATGATAG+AGG | - | chr1.4:1628112-1628131 | None:intergenic | 30.0% | |
| CCAAAGAATCTTCAAATTAC+AGG | - | chr1.4:1628017-1628036 | None:intergenic | 30.0% | |
| CCTGTAATTTGAAGATTCTT+TGG | + | chr1.4:1628014-1628033 | MS.gene90717:intron | 30.0% | |
| CTAATAATTTCTCTTCTGAG+AGG | + | chr1.4:1631925-1631944 | MS.gene90717:intron | 30.0% | |
| CTCAATTAAGACAACTATTG+AGG | + | chr1.4:1629280-1629299 | MS.gene90717:CDS | 30.0% | |
| CTCAGAAGAGAAATTATTAG+AGG | - | chr1.4:1631925-1631944 | None:intergenic | 30.0% | |
| GAACTCCTGAAATTAAAATC+GGG | - | chr1.4:1627661-1627680 | None:intergenic | 30.0% | |
| GAAGAATTGGATCGTAATTA+CGG | - | chr1.4:1626592-1626611 | None:intergenic | 30.0% | |
| GATGGAAGTTATGTAATTTC+AGG | + | chr1.4:1631692-1631711 | MS.gene90717:CDS | 30.0% | |
| GTGATCTTTATGAACACATT+TGG | - | chr1.4:1630964-1630983 | None:intergenic | 30.0% | |
| TAAGAGTCTACAAAAGTAGT+CGG | - | chr1.4:1629646-1629665 | None:intergenic | 30.0% | |
| TAGATATATGGAATCACAAC+AGG | + | chr1.4:1629578-1629597 | MS.gene90717:CDS | 30.0% | |
| TAGTTATGATTCCAGGAAAT+TGG | + | chr1.4:1630932-1630951 | MS.gene90717:CDS | 30.0% | |
| TCAATTTCATGCTTAGCTAA+TGG | + | chr1.4:1627167-1627186 | MS.gene90717:intron | 30.0% | |
| TGTACAGTCAAAATTCATGA+AGG | + | chr1.4:1628130-1628149 | MS.gene90717:intron | 30.0% | |
| TGTAGCATTACACATGTAAT+TGG | + | chr1.4:1628276-1628295 | MS.gene90717:intron | 30.0% | |
| TTAAGCATCAAGTAAGGAAA+AGG | - | chr1.4:1628587-1628606 | None:intergenic | 30.0% | |
| TTAGATGTACCATTTCTACA+AGG | - | chr1.4:1629924-1629943 | None:intergenic | 30.0% | |
| TTCAATTAGTTAGTTGGCTA+TGG | + | chr1.4:1631894-1631913 | MS.gene90717:intron | 30.0% | |
| TTGTACACTTGATATAGGAT+TGG | + | chr1.4:1627203-1627222 | MS.gene90717:intron | 30.0% | |
| ! | AAACAGTTTTCATCTGAGAA+GGG | - | chr1.4:1629973-1629992 | None:intergenic | 30.0% |
| ! | AAAGAAGAAGCCTTGTATAT+TGG | - | chr1.4:1632107-1632126 | None:intergenic | 30.0% |
| ! | AGAAATCTTTTAAACAGCTG+AGG | - | chr1.4:1631375-1631394 | None:intergenic | 30.0% |
| ! | ATAATTCTTCTTTTCCGCAA+CGG | - | chr1.4:1632212-1632231 | None:intergenic | 30.0% |
| ! | ATGTTTGGAAGAATGCATTT+TGG | + | chr1.4:1629398-1629417 | MS.gene90717:CDS | 30.0% |
| ! | ATTTTCATGTTTCACTCTAC+AGG | + | chr1.4:1631058-1631077 | MS.gene90717:intron | 30.0% |
| ! | CATTATCATTTTCCTTACTG+GGG | - | chr1.4:1630445-1630464 | None:intergenic | 30.0% |
| ! | GGAACCAATAAATTTTACAG+TGG | + | chr1.4:1630758-1630777 | MS.gene90717:CDS | 30.0% |
| ! | TACTTCAATTTTCCTTACTC+AGG | + | chr1.4:1626897-1626916 | MS.gene90717:intron | 30.0% |
| ! | TATATTTGCTTTCTGAAGAG+TGG | + | chr1.4:1628790-1628809 | MS.gene90717:intron | 30.0% |
| !! | AACAATTTTGTTTACAGGAG+GGG | - | chr1.4:1627983-1628002 | None:intergenic | 30.0% |
| !! | AATGCATTTTGGTAAGTCAT+AGG | + | chr1.4:1629409-1629428 | MS.gene90717:intron | 30.0% |
| !! | ATGCATTTTGGTAAGTCATA+GGG | + | chr1.4:1629410-1629429 | MS.gene90717:intron | 30.0% |
| !! | GTTTATAAGCACTTTTGAGA+CGG | - | chr1.4:1627113-1627132 | None:intergenic | 30.0% |
| AAAAACCACCAATGAAACAC+GGG | - | chr1.4:1627414-1627433 | None:intergenic | 35.0% | |
| AAAATCCGCTCAAATTACAG+GGG | - | chr1.4:1628087-1628106 | None:intergenic | 35.0% | |
| AATCCGCTAATATTACAGTG+GGG | + | chr1.4:1628224-1628243 | MS.gene90717:intron | 35.0% | |
| AATCTCAGGGAATGAATTGA+AGG | - | chr1.4:1631952-1631971 | None:intergenic | 35.0% | |
| AATGAATTACCTGAAGGTCT+TGG | - | chr1.4:1626450-1626469 | None:intergenic | 35.0% | |
| ACGTTTCTGCAGTGTAATTA+TGG | + | chr1.4:1630982-1631001 | MS.gene90717:intron | 35.0% | |
| ACTGCTATAGTTATGATTCC+AGG | + | chr1.4:1630925-1630944 | MS.gene90717:CDS | 35.0% | |
| AGAAAGATTGGAAGAGTGAT+GGG | + | chr1.4:1627340-1627359 | MS.gene90717:intron | 35.0% | |
| AGAATCCGCTAATATTACAG+TGG | + | chr1.4:1628222-1628241 | MS.gene90717:intron | 35.0% | |
| AGAATCTTCCCTTATAATGG+TGG | + | chr1.4:1631232-1631251 | MS.gene90717:CDS | 35.0% | |
| AGCCAGTAAATAGTTTCGTA+TGG | + | chr1.4:1629703-1629722 | MS.gene90717:CDS | 35.0% | |
| AGCTGATGCTAAGAAAAAGA+AGG | + | chr1.4:1632139-1632158 | MS.gene90717:CDS | 35.0% | |
| ATCTCAGGGAATGAATTGAA+GGG | - | chr1.4:1631951-1631970 | None:intergenic | 35.0% | |
| ATGATACTAACCTCAGACTT+TGG | + | chr1.4:1631720-1631739 | MS.gene90717:CDS | 35.0% | |
| ATGCTGTTGAAAGTTTGGTT+TGG | + | chr1.4:1627366-1627385 | MS.gene90717:intron | 35.0% | |
| ATTACAAATAGCCTAGCAGA+GGG | - | chr1.4:1627455-1627474 | None:intergenic | 35.0% | |
| ATTGATGGGAGTTGAGTTAA+CGG | - | chr1.4:1630124-1630143 | None:intergenic | 35.0% | |
| CAAAATCCGCTCAAATTACA+GGG | - | chr1.4:1628088-1628107 | None:intergenic | 35.0% | |
| CAAAGTTATATCACGCTCTA+CGG | + | chr1.4:1626402-1626421 | MS.gene90717:CDS | 35.0% | |
| CAAGGTTATAATGAAGTCCA+AGG | - | chr1.4:1631152-1631171 | None:intergenic | 35.0% | |
| CAGTTGAAAGAGATATTCTC+TGG | + | chr1.4:1626859-1626878 | MS.gene90717:CDS | 35.0% | |
| CCAAAACCAATTCTATAGCT+TGG | + | chr1.4:1630727-1630746 | MS.gene90717:CDS | 35.0% | |
| CCAGTAAATAGTTTCGTATG+GGG | + | chr1.4:1629705-1629724 | MS.gene90717:CDS | 35.0% | |
| CTAAGAAAAAGAAGGAAGAG+AGG | + | chr1.4:1632147-1632166 | MS.gene90717:CDS | 35.0% | |
| CTAGAAATCGCTAATGTTAC+AGG | - | chr1.4:1627956-1627975 | None:intergenic | 35.0% | |
| CTAGGGAAAATAACTGAAAG+GGG | - | chr1.4:1630045-1630064 | None:intergenic | 35.0% | |
| CTGAAAAGCTTGTGGAAATA+AGG | + | chr1.4:1627036-1627055 | MS.gene90717:intron | 35.0% | |
| CTGCAATTACAATACAACAG+TGG | + | chr1.4:1629870-1629889 | MS.gene90717:intron | 35.0% | |
| CTTACCAAGACCAATATACA+AGG | + | chr1.4:1632094-1632113 | MS.gene90717:CDS | 35.0% | |
| GAAAAACCACCAATGAAACA+CGG | - | chr1.4:1627415-1627434 | None:intergenic | 35.0% | |
| GAATCCGCTAATATTACAGT+GGG | + | chr1.4:1628223-1628242 | MS.gene90717:intron | 35.0% | |
| GAATCTTCAAATTACAGGGT+TGG | - | chr1.4:1628184-1628165 | None:intergenic | 35.0% | |
| GACTAGGGAAAATAACTGAA+AGG | - | chr1.4:1630047-1630066 | None:intergenic | 35.0% | |
| GCATTGAATGAATTACCTGA+AGG | - | chr1.4:1626456-1626475 | None:intergenic | 35.0% | |
| GCCAGTAAATAGTTTCGTAT+GGG | + | chr1.4:1629704-1629723 | MS.gene90717:CDS | 35.0% | |
| GCTAGGCTATTTGTAATCTT+TGG | + | chr1.4:1627458-1627477 | MS.gene90717:intron | 35.0% | |
| GTGAGAATCTTCCCTTATAA+TGG | + | chr1.4:1631229-1631248 | MS.gene90717:CDS | 35.0% | |
| GTTCTCAATGGTGAATTGAT+GGG | - | chr1.4:1630138-1630157 | None:intergenic | 35.0% | |
| GTTTGCAGATATTCGTCTTT+GGG | + | chr1.4:1628646-1628665 | MS.gene90717:intron | 35.0% | |
| TAATGGCACTAGTATAGAGA+GGG | - | chr1.4:1628562-1628581 | None:intergenic | 35.0% | |
| TCTCATATTATTATCCGTGC+CGG | + | chr1.4:1631558-1631577 | MS.gene90717:intron | 35.0% | |
| TGGATTCCAAGCTATAGAAT+TGG | - | chr1.4:1630736-1630755 | None:intergenic | 35.0% | |
| TGTAGATGCAATTTCGTGTA+TGG | + | chr1.4:1626822-1626841 | MS.gene90717:CDS | 35.0% | |
| TGTCTACAAGTTTCTTGACT+GGG | - | chr1.4:1627532-1627551 | None:intergenic | 35.0% | |
| TGTTCTCAATGGTGAATTGA+TGG | - | chr1.4:1630139-1630158 | None:intergenic | 35.0% | |
| TGTTTGCAGATATTCGTCTT+TGG | + | chr1.4:1628645-1628664 | MS.gene90717:intron | 35.0% | |
| TTACCCCACTGTAATATTAG+CGG | - | chr1.4:1628230-1628249 | None:intergenic | 35.0% | |
| TTATGTTCAGTGTCAGACTT+TGG | + | chr1.4:1629222-1629241 | MS.gene90717:intron | 35.0% | |
| TTCCAAACATAAACACTTGC+CGG | - | chr1.4:1629388-1629407 | None:intergenic | 35.0% | |
| TTCCACATGAAACAAGAATG+CGG | - | chr1.4:1629094-1629113 | None:intergenic | 35.0% | |
| TTCTATAGCTTGGAATCCAA+TGG | + | chr1.4:1630737-1630756 | MS.gene90717:CDS | 35.0% | |
| TTTCCAACCTCCTTATAAGT+GGG | + | chr1.4:1628307-1628326 | MS.gene90717:intron | 35.0% | |
| ! | AACTTTTCTGATGTGTGAAC+TGG | + | chr1.4:1629195-1629214 | MS.gene90717:intron | 35.0% |
| ! | AGAGATATTCTCTGGTTCAA+TGG | + | chr1.4:1626867-1626886 | MS.gene90717:CDS | 35.0% |
| ! | ATATTCTCTGGTTCAATGGA+TGG | + | chr1.4:1626871-1626890 | MS.gene90717:CDS | 35.0% |
| ! | CAAGTAAGGAAAAGGTGTAA+TGG | - | chr1.4:1628579-1628598 | None:intergenic | 35.0% |
| ! | CTTATTTCCACAAGCTTTTC+AGG | - | chr1.4:1627038-1627057 | None:intergenic | 35.0% |
| ! | GAAACAGTTTTCATCTGAGA+AGG | - | chr1.4:1629974-1629993 | None:intergenic | 35.0% |
| ! | GACAAATTTTATTGGCATGC+AGG | + | chr1.4:1630887-1630906 | MS.gene90717:intron | 35.0% |
| ! | GACCTTAATCTAGTTAGTCT+TGG | + | chr1.4:1630161-1630180 | MS.gene90717:intron | 35.0% |
| ! | TAGACCTTTTATAGGAGCAA+TGG | + | chr1.4:1626792-1626811 | MS.gene90717:CDS | 35.0% |
| ! | TCATGTTGGTTACAACTTGT+GGG | + | chr1.4:1628954-1628973 | MS.gene90717:intron | 35.0% |
| ! | TGTAATCATAAGTGTCGTGT+CGG | - | chr1.4:1631522-1631541 | None:intergenic | 35.0% |
| ! | TTCATGTTGGTTACAACTTG+TGG | + | chr1.4:1628953-1628972 | MS.gene90717:intron | 35.0% |
| ! | TTTTCCAACCTCCTTATAAG+TGG | + | chr1.4:1628306-1628325 | MS.gene90717:intron | 35.0% |
| !! | AACGGATTAAGCATCAAGTA+AGG | - | chr1.4:1628593-1628612 | None:intergenic | 35.0% |
| !! | AATAAAAGCATCAGAACCAC+TGG | - | chr1.4:1630806-1630825 | None:intergenic | 35.0% |
| !! | AATGTTCCTGTTGCTTCTTT+TGG | + | chr1.4:1629245-1629264 | MS.gene90717:CDS | 35.0% |
| !! | ACTGTAATATTAGCGGATTC+TGG | - | chr1.4:1628223-1628242 | None:intergenic | 35.0% |
| !! | ATGTTCCTGTTGCTTCTTTT+GGG | + | chr1.4:1629246-1629265 | MS.gene90717:CDS | 35.0% |
| !! | ATTCTGGTGCTTGTTTTCAT+TGG | + | chr1.4:1628520-1628539 | MS.gene90717:intron | 35.0% |
| !! | CCAAGCTATAGAATTGGTTT+TGG | - | chr1.4:1630730-1630749 | None:intergenic | 35.0% |
| !!! | CATGGCACATGTTTTGATTT+TGG | + | chr1.4:1630503-1630522 | MS.gene90717:intron | 35.0% |
| !!! | GGATACCCGATTTTAATTTC+AGG | + | chr1.4:1627653-1627672 | MS.gene90717:intron | 35.0% |
| !!! | TTTGAACTTTTTTCCCTAGC+CGG | + | chr1.4:1629366-1629385 | MS.gene90717:intron | 35.0% |
| AAAAGAGGTAGGTACTTACG+TGG | - | chr1.4:1629123-1629142 | None:intergenic | 40.0% | |
| AAGCTATCCTGAAAAGCTTG+TGG | + | chr1.4:1627028-1627047 | MS.gene90717:intron | 40.0% | |
| AATGGCACTAGTATAGAGAG+GGG | - | chr1.4:1628561-1628580 | None:intergenic | 40.0% | |
| AATTCTTCGTCCTCAAGAGA+AGG | + | chr1.4:1626604-1626623 | MS.gene90717:CDS | 40.0% | |
| AGAAAAAGAAGGAAGAGAGG+AGG | + | chr1.4:1632150-1632169 | MS.gene90717:CDS | 40.0% | |
| AGACTTTAGGCAATGATGGT+AGG | + | chr1.4:1628923-1628942 | MS.gene90717:intron | 40.0% | |
| AGTGTCTATGCCTTGCAATA+CGG | - | chr1.4:1632076-1632095 | None:intergenic | 40.0% | |
| ATCCAAAAAGGACCTGAGTA+AGG | - | chr1.4:1626912-1626931 | None:intergenic | 40.0% | |
| ATCGTAAACAGGTGAATCTC+AGG | - | chr1.4:1631966-1631985 | None:intergenic | 40.0% | |
| ATTTCTGTCCGCTTTAATCC+AGG | + | chr1.4:1629741-1629760 | MS.gene90717:CDS | 40.0% | |
| CAATACGGTTAACTTCAGGA+AGG | - | chr1.4:1632061-1632080 | None:intergenic | 40.0% | |
| CAATGCAGTGAAGTTGGATA+AGG | + | chr1.4:1626649-1626668 | MS.gene90717:CDS | 40.0% | |
| CAGTGGCTGATTACAATGAA+TGG | + | chr1.4:1629887-1629906 | MS.gene90717:intron | 40.0% | |
| CCATCCATTGCTCCTATAAA+AGG | - | chr1.4:1626799-1626818 | None:intergenic | 40.0% | |
| CCCCATACGAAACTATTTAC+TGG | - | chr1.4:1629708-1629727 | None:intergenic | 40.0% | |
| CTGAAGTTAACCGTATTGCA+AGG | + | chr1.4:1632063-1632082 | MS.gene90717:CDS | 40.0% | |
| CTGTCTACAAGTTTCTTGAC+TGG | - | chr1.4:1627533-1627552 | None:intergenic | 40.0% | |
| CTTGACTGGGAGTAAAATTG+TGG | - | chr1.4:1627519-1627538 | None:intergenic | 40.0% | |
| CTTGCAATACGGTTAACTTC+AGG | - | chr1.4:1632065-1632084 | None:intergenic | 40.0% | |
| GAAATCGCTAATGTTACAGG+AGG | - | chr1.4:1627953-1627972 | None:intergenic | 40.0% | |
| GAGAAAGATTGGAAGAGTGA+TGG | + | chr1.4:1627339-1627358 | MS.gene90717:intron | 40.0% | |
| GATAGAACAGTTAGTTCCCT+TGG | + | chr1.4:1631132-1631151 | MS.gene90717:intron | 40.0% | |
| GATGTACCATTTCTACAAGG+AGG | - | chr1.4:1629921-1629940 | None:intergenic | 40.0% | |
| GATTACAAATAGCCTAGCAG+AGG | - | chr1.4:1627456-1627475 | None:intergenic | 40.0% | |
| GCAAAATCCGCTCAAATTAC+AGG | - | chr1.4:1628089-1628108 | None:intergenic | 40.0% | |
| GTAATGGCACTAGTATAGAG+AGG | - | chr1.4:1628563-1628582 | None:intergenic | 40.0% | |
| GTATTCTGTGTCAAGTTCAG+CGG | + | chr1.4:1631668-1631687 | MS.gene90717:CDS | 40.0% | |
| TACTAACCTCAGACTTTGGA+AGG | + | chr1.4:1631724-1631743 | MS.gene90717:CDS | 40.0% | |
| TATCTGATCAGTTTGTCCAG+TGG | + | chr1.4:1630787-1630806 | MS.gene90717:intron | 40.0% | |
| TCATGTTTCACTCTACAGGA+TGG | + | chr1.4:1631062-1631081 | MS.gene90717:intron | 40.0% | |
| TCCAAGTTGTTCTGATGCTT+TGG | - | chr1.4:1631750-1631769 | None:intergenic | 40.0% | |
| TCGTAAACAGGTGAATCTCA+GGG | - | chr1.4:1631965-1631984 | None:intergenic | 40.0% | |
| TGATTCTTGCCCCACTTATA+AGG | - | chr1.4:1628320-1628339 | None:intergenic | 40.0% | |
| TGCTGTGACCACCATTATAA+GGG | - | chr1.4:1631243-1631262 | None:intergenic | 40.0% | |
| TTACAAATAGCCTAGCAGAG+GGG | - | chr1.4:1627454-1627473 | None:intergenic | 40.0% | |
| TTCCAACCTCCTTATAAGTG+GGG | + | chr1.4:1628308-1628327 | MS.gene90717:intron | 40.0% | |
| TTCTCTTGAGGACGAAGAAT+TGG | - | chr1.4:1626605-1626624 | None:intergenic | 40.0% | |
| TTTAGGCAATGATGGTAGGA+AGG | + | chr1.4:1628927-1628946 | MS.gene90717:intron | 40.0% | |
| TTTCGTATGGGGATCAGATA+CGG | + | chr1.4:1629716-1629735 | MS.gene90717:CDS | 40.0% | |
| ! | ATTGAGGTGGAATTTTGTGC+TGG | + | chr1.4:1629296-1629315 | MS.gene90717:intron | 40.0% |
| ! | CCTTTTATAGGAGCAATGGA+TGG | + | chr1.4:1626796-1626815 | MS.gene90717:CDS | 40.0% |
| ! | GAAGCCTTGTATATTGGTCT+TGG | - | chr1.4:1632101-1632120 | None:intergenic | 40.0% |
| ! | GATATTGACTACTCACCAAC+TGG | + | chr1.4:1631084-1631103 | MS.gene90717:CDS | 40.0% |
| ! | GGTAGGAAGGATTTTCATGT+TGG | + | chr1.4:1628940-1628959 | MS.gene90717:intron | 40.0% |
| ! | GGTTGATGCTGTTGAAAGTT+TGG | + | chr1.4:1627361-1627380 | MS.gene90717:intron | 40.0% |
| ! | TCATGCTTCTTCTTTTCCCT+CGG | - | chr1.4:1632005-1632024 | None:intergenic | 40.0% |
| ! | TTCCTTACTCAGGTCCTTTT+TGG | + | chr1.4:1626907-1626926 | MS.gene90717:intron | 40.0% |
| ! | TTGGTTCTCCTGGATTAAAG+CGG | - | chr1.4:1629752-1629771 | None:intergenic | 40.0% |
| !! | CATTTTGGTAAGTCATAGGG+TGG | + | chr1.4:1629413-1629432 | MS.gene90717:intron | 40.0% |
| !! | GCTAATGGGTTGAGAAAGAT+TGG | + | chr1.4:1627328-1627347 | MS.gene90717:intron | 40.0% |
| !! | GGTTTTTCAACACGTCTACT+TGG | + | chr1.4:1627427-1627446 | MS.gene90717:intron | 40.0% |
| !! | TGTTCCTGTTGCTTCTTTTG+GGG | + | chr1.4:1629247-1629266 | MS.gene90717:CDS | 40.0% |
| !!! | AAGCACTTTTGAGACGGTTT+TGG | - | chr1.4:1627107-1627126 | None:intergenic | 40.0% |
| AATGAAACACGGGTCTGGTT+CGG | - | chr1.4:1627404-1627423 | None:intergenic | 45.0% | |
| ACACGGGTAAGGATTTGGAA+GGG | - | chr1.4:1630007-1630026 | None:intergenic | 45.0% | |
| ACTGGTCGAGAATTTGTCAC+CGG | + | chr1.4:1631102-1631121 | MS.gene90717:CDS | 45.0% | |
| AGAATGACACAGCCAGATGT+GGG | - | chr1.4:1628505-1628524 | None:intergenic | 45.0% | |
| AGCCGGCAAGTGTTTATGTT+TGG | + | chr1.4:1629383-1629402 | MS.gene90717:intron | 45.0% | |
| AGGCCATAAAGAAACGCTAC+AGG | + | chr1.4:1632033-1632052 | MS.gene90717:CDS | 45.0% | |
| AGTTATATCACGCTCTACGG+AGG | + | chr1.4:1626405-1626424 | MS.gene90717:CDS | 45.0% | |
| ATCTCTTAGCAAGCTCAGCT+AGG | + | chr1.4:1629772-1629791 | MS.gene90717:CDS | 45.0% | |
| CTGCTGTGACCACCATTATA+AGG | - | chr1.4:1631244-1631263 | None:intergenic | 45.0% | |
| GAGTTAACGGAATTGCCAGA+TGG | - | chr1.4:1630111-1630130 | None:intergenic | 45.0% | |
| GGGAATCATGAGAGAGACTA+GGG | - | chr1.4:1630062-1630081 | None:intergenic | 45.0% | |
| GGGACAAAAAGGAGGAGTAA+TGG | - | chr1.4:1628483-1628502 | None:intergenic | 45.0% | |
| GGTGTCTGTGCTTCATAGAT+TGG | + | chr1.4:1631617-1631636 | MS.gene90717:intron | 45.0% | |
| GTGACAAATTCTCGACCAGT+TGG | - | chr1.4:1631102-1631121 | None:intergenic | 45.0% | |
| GTGCCTGTAGCGTTTCTTTA+TGG | - | chr1.4:1632039-1632058 | None:intergenic | 45.0% | |
| GTGGCGCTCAAGTAGATATA+TGG | + | chr1.4:1629566-1629585 | MS.gene90717:CDS | 45.0% | |
| GTGTTACAACAAAGCCGTTG+CGG | + | chr1.4:1632195-1632214 | MS.gene90717:CDS | 45.0% | |
| TCACTCCCCTGTAATTTGAG+CGG | + | chr1.4:1628079-1628098 | MS.gene90717:intron | 45.0% | |
| TGCAGTTACGAAATGTGCCA+AGG | - | chr1.4:1630596-1630615 | None:intergenic | 45.0% | |
| TGCTCTCAATGCAGTGAAGT+TGG | + | chr1.4:1626643-1626662 | MS.gene90717:CDS | 45.0% | |
| TGGGAATCATGAGAGAGACT+AGG | - | chr1.4:1630063-1630082 | None:intergenic | 45.0% | |
| TGTTGTTACCTCCTTTCTGC+AGG | + | chr1.4:1629676-1629695 | MS.gene90717:intron | 45.0% | |
| TTATGGCAGCCTATGAAGCA+CGG | + | chr1.4:1631438-1631457 | MS.gene90717:intron | 45.0% | |
| TTCTTGCCCCACTTATAAGG+AGG | - | chr1.4:1628317-1628336 | None:intergenic | 45.0% | |
| ! | AACATAAACACTTGCCGGCT+AGG | - | chr1.4:1629383-1629402 | None:intergenic | 45.0% |
| ! | AATCATAAGTGTCGTGTCGG+TGG | - | chr1.4:1631519-1631538 | None:intergenic | 45.0% |
| ! | ACATAAACACTTGCCGGCTA+GGG | - | chr1.4:1629382-1629401 | None:intergenic | 45.0% |
| ! | CTTTGTTGTAACACTCCCTG+GGG | - | chr1.4:1632189-1632208 | None:intergenic | 45.0% |
| ! | GAAGAAGCATGACTATCACG+AGG | + | chr1.4:1632013-1632032 | MS.gene90717:CDS | 45.0% |
| ! | GCCAAAGCATCAGAACAACT+TGG | + | chr1.4:1631746-1631765 | MS.gene90717:CDS | 45.0% |
| ! | GCTTTGTTGTAACACTCCCT+GGG | - | chr1.4:1632190-1632209 | None:intergenic | 45.0% |
| ! | GTGGTTGATGTATCGTCTCT+AGG | - | chr1.4:1627500-1627519 | None:intergenic | 45.0% |
| ! | TACTATCTGAGACACGGGTA+AGG | - | chr1.4:1630018-1630037 | None:intergenic | 45.0% |
| ! | TTCTCTGGTTCAATGGATGG+AGG | + | chr1.4:1626874-1626893 | MS.gene90717:CDS | 45.0% |
| ! | TTTGGCTTCACCCAATTTCC+TGG | - | chr1.4:1630946-1630965 | None:intergenic | 45.0% |
| !! | GAGAGTACTATCTGAGACAC+GGG | - | chr1.4:1630023-1630042 | None:intergenic | 45.0% |
| !! | GCTAAGAGATTTGGTTCTCC+TGG | - | chr1.4:1629762-1629781 | None:intergenic | 45.0% |
| !! | GCTGAGCTTGCTAAGAGATT+TGG | - | chr1.4:1629771-1629790 | None:intergenic | 45.0% |
| !! | GGAGAGTACTATCTGAGACA+CGG | - | chr1.4:1630024-1630043 | None:intergenic | 45.0% |
| !! | GTCTTTGGGATATAGCTGCT+AGG | + | chr1.4:1628660-1628679 | MS.gene90717:CDS | 45.0% |
| !! | TGTTGCTTCTTTTGGGGACT+CGG | + | chr1.4:1629253-1629272 | MS.gene90717:CDS | 45.0% |
| AATGACACAGCCAGATGTGG+GGG | - | chr1.4:1628503-1628522 | None:intergenic | 50.0% | |
| AGAACGAAGCCAAGACCTTC+AGG | + | chr1.4:1626438-1626457 | MS.gene90717:CDS | 50.0% | |
| AGATGTGGGGGACAAAAAGG+AGG | - | chr1.4:1628491-1628510 | None:intergenic | 50.0% | |
| AGGAGGAATGAAGAGGACGT+GGG | - | chr1.4:1630082-1630101 | None:intergenic | 50.0% | |
| ATGAAGCACAGACACCGACA+CGG | - | chr1.4:1631613-1631632 | None:intergenic | 50.0% | |
| ATTCCTCCTCACTTGCCATC+TGG | + | chr1.4:1630093-1630112 | MS.gene90717:intron | 50.0% | |
| CAGAATGACACAGCCAGATG+TGG | - | chr1.4:1628506-1628525 | None:intergenic | 50.0% | |
| CCTGTGGCATCATCGTAAAC+AGG | - | chr1.4:1631977-1631996 | None:intergenic | 50.0% | |
| CCTGTTTACGATGATGCCAC+AGG | + | chr1.4:1631974-1631993 | MS.gene90717:intron | 50.0% | |
| CTGAGACACGGGTAAGGATT+TGG | - | chr1.4:1630012-1630031 | None:intergenic | 50.0% | |
| GAACCAGACCCGTGTTTCAT+TGG | + | chr1.4:1627403-1627422 | MS.gene90717:intron | 50.0% | |
| GAATGACACAGCCAGATGTG+GGG | - | chr1.4:1628504-1628523 | None:intergenic | 50.0% | |
| GAATTGCCAGATGGCAAGTG+AGG | - | chr1.4:1630102-1630121 | None:intergenic | 50.0% | |
| GACACGGGTAAGGATTTGGA+AGG | - | chr1.4:1630008-1630027 | None:intergenic | 50.0% | |
| GAGTCCCCAAAAGAAGCAAC+AGG | - | chr1.4:1629254-1629273 | None:intergenic | 50.0% | |
| GCAAGTGAGGAGGAATGAAG+AGG | - | chr1.4:1630089-1630108 | None:intergenic | 50.0% | |
| GGCATGCAGGCAAATGAAGA+TGG | + | chr1.4:1630900-1630919 | MS.gene90717:intron | 50.0% | |
| TACGGATGGATACCCCAGTA+AGG | + | chr1.4:1630430-1630449 | MS.gene90717:CDS | 50.0% | |
| TAGCGCTGTTGATCACCAGT+GGG | + | chr1.4:1629522-1629541 | MS.gene90717:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr1.4:1631449-1631468 | MS.gene90717:intron | 50.0% | |
| TATTCCACCGCCTTCTCTTG+AGG | - | chr1.4:1626617-1626636 | None:intergenic | 50.0% | |
| TCTTCGTCCTCAAGAGAAGG+CGG | + | chr1.4:1626607-1626626 | MS.gene90717:CDS | 50.0% | |
| TGCCCCACTTATAAGGAGGT+TGG | - | chr1.4:1628313-1628332 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGGCGAAAGA+CGG | - | chr1.4:1631794-1631813 | None:intergenic | 50.0% | |
| TTAGCGCTGTTGATCACCAG+TGG | + | chr1.4:1629521-1629540 | MS.gene90717:intron | 50.0% | |
| ! | CACATCTGGCTGTGTCATTC+TGG | + | chr1.4:1628504-1628523 | MS.gene90717:intron | 50.0% |
| ! | CTTTGGCCTTCCAAAGTCTG+AGG | - | chr1.4:1631733-1631752 | None:intergenic | 50.0% |
| ! | GAGGTGGAATTTTGTGCTGG+AGG | + | chr1.4:1629299-1629318 | MS.gene90717:intron | 50.0% |
| ! | GGCCGCATTCTTGTTTCATG+TGG | + | chr1.4:1629089-1629108 | MS.gene90717:CDS | 50.0% |
| ! | TCCTTTTTGTCCCCCACATC+TGG | + | chr1.4:1628490-1628509 | MS.gene90717:intron | 50.0% |
| ! | TTTTCCCTCGGAAGAACCTG+TGG | - | chr1.4:1631993-1632012 | None:intergenic | 50.0% |
| !! | GGCTTTGTTGTAACACTCCC+TGG | - | chr1.4:1632191-1632210 | None:intergenic | 50.0% |
| ACTAGTATAGAGAGGGGCGG+GGG | - | chr1.4:1628555-1628574 | None:intergenic | 55.0% | |
| ACTGGCTGAGACCTGCAGAA+AGG | - | chr1.4:1629690-1629709 | None:intergenic | 55.0% | |
| ATCTACTTGAGCGCCACCTG+TGG | - | chr1.4:1629563-1629582 | None:intergenic | 55.0% | |
| CACTAGTATAGAGAGGGGCG+GGG | - | chr1.4:1628556-1628575 | None:intergenic | 55.0% | |
| CCACCAATGAAACACGGGTC+TGG | - | chr1.4:1627409-1627428 | None:intergenic | 55.0% | |
| CCAGACCCGTGTTTCATTGG+TGG | + | chr1.4:1627406-1627425 | MS.gene90717:intron | 55.0% | |
| CGGACTGTTTGTCAGTTCCC+TGG | + | chr1.4:1629026-1629045 | MS.gene90717:CDS | 55.0% | |
| GAGGAGGAATGAAGAGGACG+TGG | - | chr1.4:1630083-1630102 | None:intergenic | 55.0% | |
| GATGCCACAGGTTCTTCCGA+GGG | + | chr1.4:1631986-1632005 | MS.gene90717:intron | 55.0% | |
| GCACTAGTATAGAGAGGGGC+GGG | - | chr1.4:1628557-1628576 | None:intergenic | 55.0% | |
| GCCAGATGTGGGGGACAAAA+AGG | - | chr1.4:1628494-1628513 | None:intergenic | 55.0% | |
| GCTGTTGATCACCAGTGGGA+CGG | + | chr1.4:1629526-1629545 | MS.gene90717:CDS | 55.0% | |
| GGCACTAGTATAGAGAGGGG+CGG | - | chr1.4:1628558-1628577 | None:intergenic | 55.0% | |
| TCTACTTGGACCCCTCTGCT+AGG | + | chr1.4:1627441-1627460 | MS.gene90717:intron | 55.0% | |
| TGATGCCACAGGTTCTTCCG+AGG | + | chr1.4:1631985-1632004 | MS.gene90717:intron | 55.0% | |
| TGTCAGTTCCCTGGACACCA+AGG | + | chr1.4:1629035-1629054 | MS.gene90717:CDS | 55.0% | |
| TGTGTCAAGTTCAGCGGCGA+TGG | + | chr1.4:1631674-1631693 | MS.gene90717:CDS | 55.0% | |
| TTGCCAGATGGCAAGTGAGG+AGG | - | chr1.4:1630099-1630118 | None:intergenic | 55.0% | |
| ! | CATAAGTGTCGTGTCGGTGG+CGG | - | chr1.4:1631516-1631535 | None:intergenic | 55.0% |
| ! | TATTATCCGTGCCGGCGTGT+CGG | + | chr1.4:1631566-1631585 | MS.gene90717:intron | 55.0% |
| !! | AACACGGGTCTGGTTCGGTA+TGG | - | chr1.4:1627399-1627418 | None:intergenic | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | - | chr1.4:1631450-1631469 | None:intergenic | 55.0% |
| !! | GCTTCTTTTGGGGACTCGGA+TGG | + | chr1.4:1629257-1629276 | MS.gene90717:CDS | 55.0% |
| !! | GGGTCTGGTTCGGTATGGTA+TGG | - | chr1.4:1627394-1627413 | None:intergenic | 55.0% |
| ACAGACACCGACACGGACAC+CGG | - | chr1.4:1631606-1631625 | None:intergenic | 60.0% | |
| AGGAAAGCTCACAGTGCCCC+AGG | + | chr1.4:1632170-1632189 | MS.gene90717:CDS | 60.0% | |
| CAAAATGCTCGCCGTCCCAC+TGG | - | chr1.4:1629540-1629559 | None:intergenic | 60.0% | |
| CTAGTATAGAGAGGGGCGGG+GGG | - | chr1.4:1628554-1628573 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr1.4:1631455-1631474 | MS.gene90717:intron | 60.0% | |
| GGAAAGCTCACAGTGCCCCA+GGG | + | chr1.4:1632171-1632190 | MS.gene90717:CDS | 60.0% | |
| GGATTAGGCGTGTCCCGTGT+CGG | + | chr1.4:1631470-1631489 | MS.gene90717:intron | 60.0% | |
| GGCCATCTGTCGATGCTGTC+AGG | - | chr1.4:1629073-1629092 | None:intergenic | 60.0% | |
| GGCTGAGACCTGCAGAAAGG+AGG | - | chr1.4:1629687-1629706 | None:intergenic | 60.0% | |
| TCGTCCTCAAGAGAAGGCGG+TGG | + | chr1.4:1626610-1626629 | MS.gene90717:CDS | 60.0% | |
| ! | GACGGCGAGCATTTTGCCAC+AGG | + | chr1.4:1629544-1629563 | MS.gene90717:CDS | 60.0% |
| ! | GGCGAGCATTTTGCCACAGG+TGG | + | chr1.4:1629547-1629566 | MS.gene90717:CDS | 60.0% |
| !! | GCACAGCACCTTGGTGTCCA+GGG | - | chr1.4:1629046-1629065 | None:intergenic | 60.0% |
| !! | GGCCTGACAGCATCGACAGA+TGG | + | chr1.4:1629068-1629087 | MS.gene90717:CDS | 60.0% |
| ACACCGACGCGTGTCCGACA+CGG | - | chr1.4:1631487-1631506 | None:intergenic | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr1.4:1631595-1631614 | None:intergenic | 65.0% | |
| CACGGGACACGCCTAATCCG+AGG | - | chr1.4:1631469-1631488 | None:intergenic | 65.0% | |
| GTCGTGTCCGGTGTCCGTGT+CGG | + | chr1.4:1631596-1631615 | MS.gene90717:intron | 65.0% | |
| TCAGGCCTCGCACAGCACCT+TGG | - | chr1.4:1629055-1629074 | None:intergenic | 65.0% | |
| ! | GTCGGTGTCCGTGTCGTGTC+CGG | + | chr1.4:1631584-1631603 | MS.gene90717:intron | 65.0% |
| ! | TGTCGTGTCGGTGGCGGTGT+CGG | - | chr1.4:1631510-1631529 | None:intergenic | 65.0% |
| !! | CGCACAGCACCTTGGTGTCC+AGG | - | chr1.4:1629047-1629066 | None:intergenic | 65.0% |
| !! | GGACACCAAGGTGCTGTGCG+AGG | + | chr1.4:1629047-1629066 | MS.gene90717:CDS | 65.0% |
| CACCGACGCGTGTCCGACAC+GGG | - | chr1.4:1631486-1631505 | None:intergenic | 70.0% | |
| CGACACGGACACCGACACGC+CGG | - | chr1.4:1631580-1631599 | None:intergenic | 70.0% | |
| GTCCCGTGTCGGACACGCGT+CGG | + | chr1.4:1631481-1631500 | MS.gene90717:intron | 70.0% | |
| CGGACACCGACACGCCGGCA+CGG | - | chr1.4:1631575-1631594 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1626394 | 1632247 | 1626394 | ID=MS.gene90717 |
| chr1.4 | mRNA | 1626394 | 1632247 | 1626394 | ID=MS.gene90717.t1;Parent=MS.gene90717 |
| chr1.4 | exon | 1626394 | 1626459 | 1626394 | ID=MS.gene90717.t1.exon1;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1626394 | 1626459 | 1626394 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1626581 | 1626670 | 1626581 | ID=MS.gene90717.t1.exon2;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1626581 | 1626670 | 1626581 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1626784 | 1626895 | 1626784 | ID=MS.gene90717.t1.exon3;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1626784 | 1626895 | 1626784 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1628654 | 1628681 | 1628654 | ID=MS.gene90717.t1.exon4;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1628654 | 1628681 | 1628654 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1629025 | 1629123 | 1629025 | ID=MS.gene90717.t1.exon5;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1629025 | 1629123 | 1629025 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1629232 | 1629301 | 1629232 | ID=MS.gene90717.t1.exon6;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1629232 | 1629301 | 1629232 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1629385 | 1629419 | 1629385 | ID=MS.gene90717.t1.exon7;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1629385 | 1629419 | 1629385 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1629525 | 1629599 | 1629525 | ID=MS.gene90717.t1.exon8;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1629525 | 1629599 | 1629525 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1629698 | 1629793 | 1629698 | ID=MS.gene90717.t1.exon9;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1629698 | 1629793 | 1629698 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1630404 | 1630467 | 1630404 | ID=MS.gene90717.t1.exon10;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1630404 | 1630467 | 1630404 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1630726 | 1630779 | 1630726 | ID=MS.gene90717.t1.exon11;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1630726 | 1630779 | 1630726 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1630909 | 1630994 | 1630909 | ID=MS.gene90717.t1.exon12;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1630909 | 1630994 | 1630909 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1631080 | 1631140 | 1631080 | ID=MS.gene90717.t1.exon13;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1631080 | 1631140 | 1631080 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1631229 | 1631293 | 1631229 | ID=MS.gene90717.t1.exon14;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1631229 | 1631293 | 1631229 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1631667 | 1631772 | 1631667 | ID=MS.gene90717.t1.exon15;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1631667 | 1631772 | 1631667 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| chr1.4 | exon | 1631996 | 1632247 | 1631996 | ID=MS.gene90717.t1.exon16;Parent=MS.gene90717.t1 |
| chr1.4 | CDS | 1631996 | 1632247 | 1631996 | ID=cds.MS.gene90717.t1;Parent=MS.gene90717.t1 |
| Gene Sequence |
| Protein sequence |
