Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049295.t1 | XP_003613143.1 | 88.1 | 319 | 38 | 0 | 1 | 319 | 64 | 382 | 9.10E-161 | 576.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049295.t1 | Q9FVQ0 | 51.7 | 315 | 152 | 0 | 1 | 315 | 63 | 377 | 1.3e-94 | 347.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049295.t1 | G7JYZ1 | 88.1 | 319 | 38 | 0 | 1 | 319 | 64 | 382 | 6.6e-161 | 576.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23537 | MS.gene049295 | PPI |
| MS.gene049295 | MS.gene015953 | PPI |
| MS.gene51580 | MS.gene049295 | PPI |
| MS.gene049295 | MS.gene64265 | PPI |
| MS.gene049295 | MS.gene56048 | PPI |
| MS.gene049295 | MS.gene064951 | PPI |
| MS.gene94810 | MS.gene049295 | PPI |
| MS.gene049295 | MS.gene018590 | PPI |
| MS.gene049295 | MS.gene059027 | PPI |
| MS.gene049295 | MS.gene059136 | PPI |
| MS.gene049295 | MS.gene09884 | PPI |
| MS.gene049295 | MS.gene32792 | PPI |
| MS.gene049295 | MS.gene61665 | PPI |
| MS.gene049295 | MS.gene40340 | PPI |
| MS.gene031178 | MS.gene049295 | PPI |
| MS.gene049295 | MS.gene021474 | PPI |
| MS.gene049295 | MS.gene53594 | PPI |
| MS.gene049295 | MS.gene038029 | PPI |
| MS.gene049295 | MS.gene014685 | PPI |
| MS.gene049295 | MS.gene061851 | PPI |
| MS.gene049295 | MS.gene31616 | PPI |
| MS.gene24021 | MS.gene049295 | PPI |
| MS.gene049295 | MS.gene60245 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049295.t1 | MTR_5g033260 | 88.088 | 319 | 38 | 0 | 1 | 319 | 64 | 382 | 0.0 | 579 |
| MS.gene049295.t1 | MTR_8g432640 | 82.759 | 319 | 55 | 0 | 1 | 319 | 64 | 382 | 0.0 | 559 |
| MS.gene049295.t1 | MTR_7g107690 | 46.984 | 315 | 167 | 0 | 2 | 316 | 67 | 381 | 2.33e-110 | 326 |
| MS.gene049295.t1 | MTR_7g107710 | 48.589 | 319 | 162 | 2 | 1 | 318 | 64 | 381 | 4.11e-107 | 317 |
| MS.gene049295.t1 | MTR_3g088925 | 47.319 | 317 | 165 | 2 | 1 | 316 | 65 | 380 | 1.80e-106 | 316 |
| MS.gene049295.t1 | MTR_3g088945 | 46.688 | 317 | 167 | 2 | 1 | 316 | 65 | 380 | 4.02e-105 | 313 |
| MS.gene049295.t1 | MTR_4g051642 | 48.896 | 317 | 159 | 3 | 1 | 316 | 65 | 379 | 4.90e-105 | 313 |
| MS.gene049295.t1 | MTR_3g088955 | 46.057 | 317 | 169 | 2 | 1 | 316 | 65 | 380 | 7.60e-103 | 307 |
| MS.gene049295.t1 | MTR_3g109520 | 44.688 | 320 | 171 | 2 | 1 | 315 | 97 | 415 | 4.26e-95 | 288 |
| MS.gene049295.t1 | MTR_1g008380 | 43.260 | 319 | 174 | 3 | 1 | 314 | 100 | 416 | 1.04e-91 | 280 |
| MS.gene049295.t1 | MTR_1g069275 | 45.938 | 320 | 163 | 5 | 1 | 314 | 83 | 398 | 2.35e-91 | 278 |
| MS.gene049295.t1 | MTR_1g046230 | 45.483 | 321 | 166 | 5 | 1 | 314 | 82 | 400 | 2.63e-90 | 276 |
| MS.gene049295.t1 | MTR_7g099330 | 45.625 | 320 | 160 | 5 | 1 | 314 | 82 | 393 | 5.57e-89 | 272 |
| MS.gene049295.t1 | MTR_6g086870 | 42.724 | 323 | 174 | 4 | 1 | 314 | 78 | 398 | 8.36e-88 | 269 |
| MS.gene049295.t1 | MTR_1g011630 | 43.849 | 317 | 167 | 5 | 1 | 312 | 74 | 384 | 2.80e-87 | 268 |
| MS.gene049295.t1 | MTR_7g099160 | 45.574 | 305 | 152 | 5 | 15 | 313 | 217 | 513 | 2.66e-83 | 261 |
| MS.gene049295.t1 | MTR_3g096030 | 86.607 | 112 | 15 | 0 | 8 | 119 | 47 | 158 | 5.53e-66 | 204 |
| MS.gene049295.t1 | MTR_3g096020 | 61.947 | 113 | 5 | 3 | 149 | 260 | 1 | 76 | 1.20e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049295.t1 | AT1G48910 | 51.746 | 315 | 152 | 0 | 1 | 315 | 63 | 377 | 5.11e-119 | 348 |
| MS.gene049295.t1 | AT1G21430 | 48.896 | 317 | 157 | 4 | 1 | 315 | 67 | 380 | 2.09e-102 | 306 |
| MS.gene049295.t1 | AT1G04610 | 46.855 | 318 | 159 | 5 | 2 | 311 | 96 | 411 | 2.47e-97 | 294 |
| MS.gene049295.t1 | AT5G25620 | 45.794 | 321 | 164 | 5 | 1 | 314 | 90 | 407 | 9.06e-95 | 287 |
| MS.gene049295.t1 | AT5G25620 | 45.794 | 321 | 164 | 5 | 1 | 314 | 90 | 407 | 1.25e-94 | 287 |
| MS.gene049295.t1 | AT5G43890 | 45.283 | 318 | 165 | 5 | 1 | 311 | 83 | 398 | 3.89e-89 | 273 |
| MS.gene049295.t1 | AT5G11320 | 44.164 | 317 | 164 | 4 | 1 | 312 | 75 | 383 | 5.99e-89 | 272 |
| MS.gene049295.t1 | AT4G13260 | 43.533 | 317 | 173 | 2 | 1 | 312 | 86 | 401 | 1.88e-88 | 271 |
| MS.gene049295.t1 | AT1G04180 | 43.849 | 317 | 168 | 5 | 1 | 311 | 83 | 395 | 4.25e-88 | 270 |
| MS.gene049295.t1 | AT4G32540 | 43.871 | 310 | 161 | 5 | 8 | 311 | 86 | 388 | 1.64e-87 | 268 |
| MS.gene049295.t1 | AT4G32540 | 44.051 | 311 | 161 | 5 | 8 | 311 | 86 | 390 | 1.69e-87 | 268 |
| MS.gene049295.t1 | AT4G28720 | 43.119 | 327 | 176 | 6 | 1 | 319 | 83 | 407 | 5.29e-87 | 268 |
| MS.gene049295.t1 | AT2G33230 | 43.478 | 322 | 171 | 5 | 1 | 314 | 90 | 408 | 2.29e-83 | 258 |
| MS.gene049295.t1 | AT4G13260 | 42.414 | 290 | 161 | 2 | 27 | 311 | 9 | 297 | 7.79e-76 | 235 |
| MS.gene049295.t1 | AT5G11320 | 43.609 | 266 | 138 | 3 | 1 | 261 | 75 | 333 | 8.09e-71 | 224 |
| MS.gene049295.t1 | AT4G13260 | 45.333 | 225 | 118 | 1 | 1 | 220 | 86 | 310 | 1.86e-64 | 206 |
Find 79 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCTTATGATCTCTATAAT+TGG | 0.192502 | 3.3:-79656897 | MS.gene049295:CDS |
| CGGTATTTATCGTCCCAAAT+TGG | 0.220274 | 3.3:-79654319 | MS.gene049295:CDS |
| AATTATGCAGATTAAGAGTT+TGG | 0.267840 | 3.3:+79653499 | None:intergenic |
| GTATTGAAGGAATTGGTCTT+TGG | 0.306079 | 3.3:+79657230 | None:intergenic |
| AGGTAGGTTGGGCCTGAGGG+TGG | 0.310193 | 3.3:+79657255 | None:intergenic |
| TGCTTATGATCTCTATAATT+GGG | 0.311048 | 3.3:-79656896 | MS.gene049295:CDS |
| ATATGAATCAAAAGAGGTTT+TGG | 0.328118 | 3.3:-79656950 | MS.gene049295:CDS |
| GAGTTGTAAAGGTCCCAATT+TGG | 0.331158 | 3.3:+79654305 | None:intergenic |
| AGTTGTAAAGGTCCCAATTT+GGG | 0.358601 | 3.3:+79654306 | None:intergenic |
| TGTCTATGTATTGAAGGAAT+TGG | 0.360875 | 3.3:+79657223 | None:intergenic |
| CATATTTGTCTATGTATTGA+AGG | 0.371895 | 3.3:+79657217 | None:intergenic |
| CACTCAAAATACTACAAATC+TGG | 0.376434 | 3.3:-79656979 | MS.gene049295:CDS |
| GTTGGGCCTGAGGGTGGGTG+AGG | 0.384881 | 3.3:+79657261 | None:intergenic |
| TTATCCAGTCCAGGCACATT+AGG | 0.388569 | 3.3:+79657021 | None:intergenic |
| AATTAAAGAGGGATCTATAA+AGG | 0.391104 | 3.3:-79654232 | MS.gene049295:intron |
| GTCTATTGTCGTTCGAAGTC+CGG | 0.391484 | 3.3:-79656863 | MS.gene049295:intron |
| GGTATTTATCGTCCCAAATT+GGG | 0.412423 | 3.3:-79654318 | MS.gene049295:CDS |
| GGTCTTTGGATAGGTAGGTT+GGG | 0.424128 | 3.3:+79657244 | None:intergenic |
| CATAGCTAATGGGTGGCTTA+AGG | 0.427269 | 3.3:-79653846 | MS.gene049295:intron |
| CTCATGCCTCACCCACCCTC+AGG | 0.439321 | 3.3:-79657267 | MS.gene049295:CDS |
| GGGACGATAAATACCGTACT+TGG | 0.439663 | 3.3:+79654326 | None:intergenic |
| AGGAACATTGGAAGTTTATG+AGG | 0.446242 | 3.3:-79657091 | MS.gene049295:CDS |
| ACTAGCAAGGAGAGGCTTGT+GGG | 0.449924 | 3.3:-79653562 | MS.gene049295:CDS |
| GGATACAAAAGCATAGCTAA+TGG | 0.454759 | 3.3:-79653857 | MS.gene049295:CDS |
| TGGTCTTTGGATAGGTAGGT+TGG | 0.458799 | 3.3:+79657243 | None:intergenic |
| GCGAATGGTGAATTATTTGC+CGG | 0.460895 | 3.3:-79654406 | MS.gene049295:CDS |
| TATTCCTAATGTGCCTGGAC+TGG | 0.461163 | 3.3:-79657025 | MS.gene049295:CDS |
| GAATTGGTCTTTGGATAGGT+AGG | 0.465992 | 3.3:+79657239 | None:intergenic |
| GGATAGGTAGGTTGGGCCTG+AGG | 0.466487 | 3.3:+79657251 | None:intergenic |
| AAATATGCTCTCAATGAGAA+AGG | 0.471673 | 3.3:-79653645 | MS.gene049295:CDS |
| GATACAAAAGCATAGCTAAT+GGG | 0.472114 | 3.3:-79653856 | MS.gene049295:CDS |
| GGTTATATTCCTAATGTGCC+TGG | 0.488785 | 3.3:-79657030 | MS.gene049295:CDS |
| GATAGGTAGGTTGGGCCTGA+GGG | 0.490086 | 3.3:+79657252 | None:intergenic |
| ATAGCATCCACAACATCAAC+CGG | 0.492553 | 3.3:+79654387 | None:intergenic |
| AAGCTTCTTGTGGTCGCCAC+CGG | 0.493429 | 3.3:-79657066 | MS.gene049295:CDS |
| GATGCAATCGTATTCGCGAC+TGG | 0.499555 | 3.3:-79653878 | MS.gene049295:CDS |
| GGTAGGTTGGGCCTGAGGGT+GGG | 0.501182 | 3.3:+79657256 | None:intergenic |
| AGGCTTGTGGGGAGTCAAGA+TGG | 0.506541 | 3.3:-79653550 | MS.gene049295:CDS |
| GAAGGAATTGGTCTTTGGAT+AGG | 0.509607 | 3.3:+79657235 | None:intergenic |
| AAGTCTGCAGTTATTGATGT+TGG | 0.511414 | 3.3:-79654267 | MS.gene049295:CDS |
| AATATGCTCTCAATGAGAAA+GGG | 0.511763 | 3.3:-79653644 | MS.gene049295:CDS |
| AAAATGCTTACCCGAGCCAT+TGG | 0.511789 | 3.3:-79653614 | MS.gene049295:CDS |
| CCTGGACTGGATAACTTTGA+AGG | 0.516577 | 3.3:-79657012 | MS.gene049295:CDS |
| TTATTTGCCGGTTGATGTTG+TGG | 0.517505 | 3.3:-79654394 | MS.gene049295:CDS |
| GTCACGTTCTTGAGTTGTAA+AGG | 0.520118 | 3.3:+79654294 | None:intergenic |
| TTCAAAATATGAATCAAAAG+AGG | 0.525909 | 3.3:-79656956 | MS.gene049295:CDS |
| TCAATTCTCGTAATATCTGA+AGG | 0.531023 | 3.3:+79653944 | None:intergenic |
| GAAACAAAGAACACTAAAGA+AGG | 0.532498 | 3.3:-79657111 | MS.gene049295:CDS |
| TTACAACTCAAGAACGTGAC+AGG | 0.534326 | 3.3:-79654291 | MS.gene049295:CDS |
| TGCTTACCCGAGCCATTGGA+AGG | 0.540363 | 3.3:-79653610 | MS.gene049295:CDS |
| TACGGTGATCTGTCCAAGTA+CGG | 0.541244 | 3.3:-79654339 | MS.gene049295:CDS |
| CCTTCAAAGTTATCCAGTCC+AGG | 0.541905 | 3.3:+79657012 | None:intergenic |
| GAACACTAAAGAAGGAACAT+TGG | 0.544778 | 3.3:-79657103 | MS.gene049295:CDS |
| GTAGTTGGGTGTGGTAACTC+AGG | 0.547445 | 3.3:-79656928 | MS.gene049295:CDS |
| ATGATGAAGTTAGAGACAGA+TGG | 0.553392 | 3.3:-79657140 | MS.gene049295:CDS |
| GACTAGCAAGGAGAGGCTTG+TGG | 0.559365 | 3.3:-79653563 | MS.gene049295:CDS |
| GCTTATGATCTCTATAATTG+GGG | 0.559964 | 3.3:-79656895 | MS.gene049295:CDS |
| CTTACCCGAGCCATTGGAAG+GGG | 0.560574 | 3.3:-79653608 | MS.gene049295:CDS |
| GGACTTCGAACGACAATAGA+CGG | 0.563490 | 3.3:+79656865 | None:intergenic |
| GATCATGGATTATACTGCGC+AGG | 0.573202 | 3.3:-79653585 | MS.gene049295:CDS |
| AATAGAGAAATGATTCGTCA+AGG | 0.580272 | 3.3:-79654432 | MS.gene049295:CDS |
| TTATGAGGCAAAGCTTCTTG+TGG | 0.587741 | 3.3:-79657076 | MS.gene049295:CDS |
| CTAGCAAGGAGAGGCTTGTG+GGG | 0.590569 | 3.3:-79653561 | MS.gene049295:CDS |
| ATGAAGTTAGAGACAGATGG+AGG | 0.593871 | 3.3:-79657137 | MS.gene049295:CDS |
| TGGGTGTGGTAACTCAGGAA+TGG | 0.594724 | 3.3:-79656923 | MS.gene049295:CDS |
| ATAGAGAAATGATTCGTCAA+GGG | 0.595594 | 3.3:-79654431 | MS.gene049295:CDS |
| GCTTACCCGAGCCATTGGAA+GGG | 0.611153 | 3.3:-79653609 | MS.gene049295:CDS |
| TATACTGCGCAGGACTAGCA+AGG | 0.623691 | 3.3:-79653575 | MS.gene049295:CDS |
| AGTTGTATTTGGAAACAACA+TGG | 0.629375 | 3.3:-79653912 | MS.gene049295:CDS |
| ACTGGATAACTTTGAAGGAG+AGG | 0.632240 | 3.3:-79657007 | MS.gene049295:CDS |
| GACTTCGAACGACAATAGAC+GGG | 0.636542 | 3.3:+79656866 | None:intergenic |
| GGATAACTTTGAAGGAGAGG+TGG | 0.646286 | 3.3:-79657004 | MS.gene049295:CDS |
| TGCGCAGGACTAGCAAGGAG+AGG | 0.654870 | 3.3:-79653570 | MS.gene049295:CDS |
| GGATGCAGAGTCAATTGCAG+AGG | 0.658304 | 3.3:-79653529 | MS.gene049295:CDS |
| ACAAAAGCATAGCTAATGGG+TGG | 0.670177 | 3.3:-79653853 | MS.gene049295:CDS |
| GATTCGTCAAGGGATGCGAA+TGG | 0.671019 | 3.3:-79654421 | MS.gene049295:CDS |
| GCCACCGGCGAAAATAGTGA+AGG | 0.676145 | 3.3:-79657051 | MS.gene049295:CDS |
| TTACCCGAGCCATTGGAAGG+GGG | 0.715554 | 3.3:-79653607 | MS.gene049295:CDS |
| TCAACTGTGCGACAATAACG+AGG | 0.715629 | 3.3:+79657174 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCATAACAAATTAATAA+TGG | + | chr3.3:79655938-79655957 | None:intergenic | 10.0% |
| !! | AACAAAAATGTATAAATAAA+GGG | - | chr3.3:79654497-79654516 | MS.gene049295:intron | 10.0% |
| !! | TAACAAAAATGTATAAATAA+AGG | - | chr3.3:79654496-79654515 | MS.gene049295:intron | 10.0% |
| !!! | TATTTTATGTATTTTTTCAA+AGG | - | chr3.3:79657088-79657107 | MS.gene049295:CDS | 10.0% |
| !!! | TTTTTTTTTAATTCTTTTGT+GGG | - | chr3.3:79656028-79656047 | MS.gene049295:intron | 10.0% |
| !!! | TTTTTTTTTTAATTCTTTTG+TGG | - | chr3.3:79656027-79656046 | MS.gene049295:intron | 10.0% |
| !! | AAAATCATGAATTAAACAAA+GGG | - | chr3.3:79655753-79655772 | MS.gene049295:intron | 15.0% |
| !! | AAAATGTATGTATATTGTAA+TGG | + | chr3.3:79656987-79657006 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+AGG | + | chr3.3:79654461-79654480 | None:intergenic | 15.0% |
| !! | ACAAAAATGTATAAATAAAG+GGG | - | chr3.3:79654498-79654517 | MS.gene049295:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr3.3:79654711-79654730 | MS.gene049295:intron | 15.0% |
| !! | TAGAGAATTATAATGAATAT+GGG | + | chr3.3:79657054-79657073 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr3.3:79654710-79654729 | MS.gene049295:intron | 15.0% |
| !! | TTAGAGAATTATAATGAATA+TGG | + | chr3.3:79657055-79657074 | None:intergenic | 15.0% |
| !!! | ATCAACTTTTTCTTATAATA+AGG | + | chr3.3:79654574-79654593 | None:intergenic | 15.0% |
| !!! | TAACTATCTTTAAGATTTTA+AGG | - | chr3.3:79654845-79654864 | MS.gene049295:intron | 15.0% |
| !!! | TAAGAAAAAGTTGATTTTTT+AGG | - | chr3.3:79654579-79654598 | MS.gene049295:intron | 15.0% |
| !!! | TAATGAAAATATGTATTTTG+TGG | - | chr3.3:79656264-79656283 | MS.gene049295:intron | 15.0% |
| !!! | TTTTTATTTTAAATTGTAGC+AGG | + | chr3.3:79655100-79655119 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAATTCTTTTGTG+GGG | - | chr3.3:79656029-79656048 | MS.gene049295:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr3.3:79654521-79654540 | MS.gene049295:intron | 20.0% |
| !! | AGAGAATTATAATGAATATG+GGG | + | chr3.3:79657053-79657072 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr3.3:79654743-79654762 | MS.gene049295:intron | 20.0% |
| !! | ATACGTCATAATTAAGATAA+AGG | - | chr3.3:79656939-79656958 | MS.gene049295:CDS | 20.0% |
| !! | ATGATGAGATTTAAGAAAAT+GGG | + | chr3.3:79655622-79655641 | None:intergenic | 20.0% |
| !! | CAAAATCATGAATTAAACAA+AGG | - | chr3.3:79655752-79655771 | MS.gene049295:intron | 20.0% |
| !! | CAAATAATATCAACATAACA+TGG | + | chr3.3:79656208-79656227 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr3.3:79654744-79654763 | MS.gene049295:intron | 20.0% |
| !! | TACGTCATAATTAAGATAAA+GGG | - | chr3.3:79656940-79656959 | MS.gene049295:CDS | 20.0% |
| !! | TATTAATACCATGTTTATGT+AGG | - | chr3.3:79656564-79656583 | MS.gene049295:intron | 20.0% |
| !! | TTCAAAATATGAATCAAAAG+AGG | - | chr3.3:79653805-79653824 | MS.gene049295:intron | 20.0% |
| !!! | ATCTATAGTTTTCACTAAAA+TGG | + | chr3.3:79655796-79655815 | None:intergenic | 20.0% |
| !!! | ATGGGTTTTCTTTTAAAAAA+TGG | + | chr3.3:79655604-79655623 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr3.3:79654780-79654799 | MS.gene049295:intron | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | - | chr3.3:79654673-79654692 | MS.gene049295:intron | 20.0% |
| !!! | TAAGAAACAATTGACTTTTT+TGG | + | chr3.3:79654668-79654687 | None:intergenic | 20.0% |
| !!! | TCAATTGAATGGTTTTAATA+TGG | + | chr3.3:79654922-79654941 | None:intergenic | 20.0% |
| !!! | TCTATAGTTTTCACTAAAAT+GGG | + | chr3.3:79655795-79655814 | None:intergenic | 20.0% |
| !!! | TGAAGCTTTTGTATTTTATT+AGG | + | chr3.3:79655651-79655670 | None:intergenic | 20.0% |
| !!! | TGGGTTTTCTTTTAAAAAAT+GGG | + | chr3.3:79655603-79655622 | None:intergenic | 20.0% |
| !!! | TTTGATTTTTGTTAGGAAAA+TGG | + | chr3.3:79655575-79655594 | None:intergenic | 20.0% |
| ! | AAATTCTTATACGATGATTG+TGG | + | chr3.3:79656008-79656027 | None:intergenic | 25.0% |
| ! | AACCATCGAAAAAATTAAAG+AGG | - | chr3.3:79656517-79656536 | MS.gene049295:intron | 25.0% |
| ! | AAGAAGATAACATGCAATAA+GGG | + | chr3.3:79655211-79655230 | None:intergenic | 25.0% |
| ! | AATTAAAGAGGGATCTATAA+AGG | - | chr3.3:79656529-79656548 | MS.gene049295:intron | 25.0% |
| ! | AATTATGCAGATTAAGAGTT+TGG | + | chr3.3:79657265-79657284 | None:intergenic | 25.0% |
| ! | AATTCTTATACGATGATTGT+GGG | + | chr3.3:79656007-79656026 | None:intergenic | 25.0% |
| ! | ACATAGCAAAATATCTAGAT+AGG | + | chr3.3:79654291-79654310 | None:intergenic | 25.0% |
| ! | ACCATCGAAAAAATTAAAGA+GGG | - | chr3.3:79656518-79656537 | MS.gene049295:intron | 25.0% |
| ! | ATAATATCAACATAACATGG+TGG | + | chr3.3:79656205-79656224 | None:intergenic | 25.0% |
| ! | ATTAATCACCTACATAAACA+TGG | + | chr3.3:79656575-79656594 | None:intergenic | 25.0% |
| ! | CATATTTGTCTATGTATTGA+AGG | + | chr3.3:79653547-79653566 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr3.3:79654520-79654539 | MS.gene049295:intron | 25.0% |
| ! | GAGAAAAAGAAAGTTGTATT+TGG | - | chr3.3:79656838-79656857 | MS.gene049295:intron | 25.0% |
| ! | GATGATGAGATTTAAGAAAA+TGG | + | chr3.3:79655623-79655642 | None:intergenic | 25.0% |
| ! | GCTATGTTAACTATCTTTAA+GGG | - | chr3.3:79654304-79654323 | MS.gene049295:CDS | 25.0% |
| ! | TATAATGTTGAAAATGACAG+TGG | - | chr3.3:79654962-79654981 | MS.gene049295:intron | 25.0% |
| ! | TGCTATGTTAACTATCTTTA+AGG | - | chr3.3:79654303-79654322 | MS.gene049295:CDS | 25.0% |
| ! | TGCTTATGATCTCTATAATT+GGG | - | chr3.3:79653865-79653884 | MS.gene049295:CDS | 25.0% |
| ! | TTGACTATCATGAAGTTTAT+GGG | + | chr3.3:79655322-79655341 | None:intergenic | 25.0% |
| ! | TTGCACAAAGTAAAAACAAT+TGG | + | chr3.3:79655444-79655463 | None:intergenic | 25.0% |
| ! | TTGCTTATGATCTCTATAAT+TGG | - | chr3.3:79653864-79653883 | MS.gene049295:CDS | 25.0% |
| ! | TTGTATACCTAAAAAGAGTA+AGG | - | chr3.3:79653985-79654004 | MS.gene049295:intron | 25.0% |
| ! | TTGTGTCAATTAAATTAGGA+CGG | + | chr3.3:79654457-79654476 | None:intergenic | 25.0% |
| ! | TTGTTGTCCATTAAATTTCT+GGG | + | chr3.3:79655861-79655880 | None:intergenic | 25.0% |
| ! | TTTGACTATCATGAAGTTTA+TGG | + | chr3.3:79655323-79655342 | None:intergenic | 25.0% |
| !! | ATATGAATCAAAAGAGGTTT+TGG | - | chr3.3:79653811-79653830 | MS.gene049295:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | + | chr3.3:79654569-79654588 | None:intergenic | 25.0% |
| !! | TAACTATCTTTAAGGGTTTA+GGG | - | chr3.3:79654311-79654330 | MS.gene049295:CDS | 25.0% |
| !! | TGGATTTTTATGTTACGAAT+GGG | + | chr3.3:79655182-79655201 | None:intergenic | 25.0% |
| !! | TTAACTATCTTTAAGGGTTT+AGG | - | chr3.3:79654310-79654329 | MS.gene049295:CDS | 25.0% |
| !! | TTGCATTTTCTCAATTTTCT+GGG | - | chr3.3:79655816-79655835 | MS.gene049295:intron | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | - | chr3.3:79654678-79654697 | MS.gene049295:intron | 25.0% |
| !! | TTTGCATTTTCTCAATTTTC+TGG | - | chr3.3:79655815-79655834 | MS.gene049295:intron | 25.0% |
| !! | TTTGTATCCTTACTCTTTTT+AGG | + | chr3.3:79653995-79654014 | None:intergenic | 25.0% |
| !! | TTTTGCATGTGTTTATTCAT+TGG | - | chr3.3:79657019-79657038 | MS.gene049295:CDS | 25.0% |
| !!! | AACGAGGTTTTATGTTAAAA+TGG | + | chr3.3:79653574-79653593 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr3.3:79654779-79654798 | MS.gene049295:intron | 25.0% |
| !!! | GGTTGAATTTGATTTTTGTT+AGG | + | chr3.3:79655582-79655601 | None:intergenic | 25.0% |
| AAAAGACTACTTTCCTATAG+TGG | - | chr3.3:79656150-79656169 | MS.gene049295:intron | 30.0% | |
| AAAGACTACTTTCCTATAGT+GGG | - | chr3.3:79656151-79656170 | MS.gene049295:intron | 30.0% | |
| AAAGCTGAATTCCATTATGT+TGG | - | chr3.3:79654990-79655009 | MS.gene049295:intron | 30.0% | |
| AAATATGCTCTCAATGAGAA+AGG | - | chr3.3:79657116-79657135 | MS.gene049295:CDS | 30.0% | |
| AACTCACAACACTTTCATTA+AGG | - | chr3.3:79656751-79656770 | MS.gene049295:intron | 30.0% | |
| AAGGAAACCCAGAAATTTAA+TGG | - | chr3.3:79655851-79655870 | MS.gene049295:intron | 30.0% | |
| AATAGAGAAATGATTCGTCA+AGG | - | chr3.3:79656329-79656348 | MS.gene049295:intron | 30.0% | |
| AATATGCTCTCAATGAGAAA+GGG | - | chr3.3:79657117-79657136 | MS.gene049295:CDS | 30.0% | |
| AGAAGATAACATGCAATAAG+GGG | + | chr3.3:79655210-79655229 | None:intergenic | 30.0% | |
| AGTTGTATTTGGAAACAACA+TGG | - | chr3.3:79656849-79656868 | MS.gene049295:intron | 30.0% | |
| ATAGAGAAATGATTCGTCAA+GGG | - | chr3.3:79656330-79656349 | MS.gene049295:intron | 30.0% | |
| CACTCAAAATACTACAAATC+TGG | - | chr3.3:79653782-79653801 | MS.gene049295:intron | 30.0% | |
| GAAACAAAGAACACTAAAGA+AGG | - | chr3.3:79653650-79653669 | MS.gene049295:CDS | 30.0% | |
| GAAGAAGATAACATGCAATA+AGG | + | chr3.3:79655212-79655231 | None:intergenic | 30.0% | |
| GAGTTAGAAATGTTCTTTAC+CGG | + | chr3.3:79653920-79653939 | None:intergenic | 30.0% | |
| GCTTATGATCTCTATAATTG+GGG | - | chr3.3:79653866-79653885 | MS.gene049295:CDS | 30.0% | |
| GTAATAAACGAAAAAGCAGA+AGG | - | chr3.3:79655981-79656000 | MS.gene049295:intron | 30.0% | |
| GTCATAATTAAGATAAAGGG+AGG | - | chr3.3:79656943-79656962 | MS.gene049295:CDS | 30.0% | |
| TATGCCAAAAAGTTGCATAT+AGG | - | chr3.3:79656073-79656092 | MS.gene049295:intron | 30.0% | |
| TCAATTCTCGTAATATCTGA+AGG | + | chr3.3:79656820-79656839 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr3.3:79654505-79654524 | MS.gene049295:intron | 30.0% | |
| TGTCTATGTATTGAAGGAAT+TGG | + | chr3.3:79653541-79653560 | None:intergenic | 30.0% | |
| TTACTTTGTGCAATTTCTTC+TGG | - | chr3.3:79655451-79655470 | MS.gene049295:intron | 30.0% | |
| TTATAGATGTCTAGCTAGAT+AGG | + | chr3.3:79654406-79654425 | None:intergenic | 30.0% | |
| ! | ATAATGGAATTCAGCTTTAC+AGG | + | chr3.3:79654988-79655007 | None:intergenic | 30.0% |
| ! | ATTTTCTCAATTTTCTGGGT+TGG | - | chr3.3:79655820-79655839 | MS.gene049295:intron | 30.0% |
| ! | CTTGTTGTCCATTAAATTTC+TGG | + | chr3.3:79655862-79655881 | None:intergenic | 30.0% |
| ! | CTTTTCTTGGCTATCATTTT+GGG | - | chr3.3:79655673-79655692 | MS.gene049295:intron | 30.0% |
| ! | GATACAAAAGCATAGCTAAT+GGG | - | chr3.3:79656905-79656924 | MS.gene049295:CDS | 30.0% |
| ! | GTGGATTTTTATGTTACGAA+TGG | + | chr3.3:79655183-79655202 | None:intergenic | 30.0% |
| ! | TACTGCACTTTTCAATTGAA+TGG | + | chr3.3:79654933-79654952 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCACTTATTT+TGG | - | chr3.3:79654757-79654776 | MS.gene049295:intron | 30.0% |
| ! | TTTTCGGCAAGACTAAAATA+CGG | - | chr3.3:79656404-79656423 | MS.gene049295:intron | 30.0% |
| ! | TTTTCTCAATTTTCTGGGTT+GGG | - | chr3.3:79655821-79655840 | MS.gene049295:intron | 30.0% |
| !! | TGAAATGGGTCACTTATTTT+GGG | - | chr3.3:79654758-79654777 | MS.gene049295:intron | 30.0% |
| !!! | ATTTTAAGGTGCTTCTAACA+TGG | - | chr3.3:79654859-79654878 | MS.gene049295:intron | 30.0% |
| !!! | GGATGCTATCATTACTTTTT+CGG | - | chr3.3:79656388-79656407 | MS.gene049295:intron | 30.0% |
| !!! | TCCCTCTTTAATTTTTTCGA+TGG | + | chr3.3:79656522-79656541 | None:intergenic | 30.0% |
| AACATAACATGGTGGCATTT+AGG | + | chr3.3:79656197-79656216 | None:intergenic | 35.0% | |
| AAGATAACATGCAATAAGGG+GGG | + | chr3.3:79655208-79655227 | None:intergenic | 35.0% | |
| AAGTCTGCAGTTATTGATGT+TGG | - | chr3.3:79656494-79656513 | MS.gene049295:intron | 35.0% | |
| ACACTAAATAATACTCCCTC+CGG | + | chr3.3:79654700-79654719 | None:intergenic | 35.0% | |
| ACATAACATGGTGGCATTTA+GGG | + | chr3.3:79656196-79656215 | None:intergenic | 35.0% | |
| ACTATCATGAAGTTTATGGG+TGG | + | chr3.3:79655319-79655338 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr3.3:79654793-79654812 | MS.gene049295:intron | 35.0% | |
| AGGAACATTGGAAGTTTATG+AGG | - | chr3.3:79653670-79653689 | MS.gene049295:intron | 35.0% | |
| AGTTGTAAAGGTCCCAATTT+GGG | + | chr3.3:79656458-79656477 | None:intergenic | 35.0% | |
| ATGATGAAGTTAGAGACAGA+TGG | - | chr3.3:79653621-79653640 | MS.gene049295:CDS | 35.0% | |
| CAATGGTTTAGATCTATCAC+TGG | + | chr3.3:79656102-79656121 | None:intergenic | 35.0% | |
| CCAAAATGATAGCCAAGAAA+AGG | + | chr3.3:79655675-79655694 | None:intergenic | 35.0% | |
| CTCTATTGAAGACATGAAAC+TGG | + | chr3.3:79656316-79656335 | None:intergenic | 35.0% | |
| GAACACTAAAGAAGGAACAT+TGG | - | chr3.3:79653658-79653677 | MS.gene049295:intron | 35.0% | |
| GAAGATAACATGCAATAAGG+GGG | + | chr3.3:79655209-79655228 | None:intergenic | 35.0% | |
| GGTATTTATCGTCCCAAATT+GGG | - | chr3.3:79656443-79656462 | MS.gene049295:intron | 35.0% | |
| GTATGAGTGTGACATAACTT+TGG | - | chr3.3:79656773-79656792 | MS.gene049295:intron | 35.0% | |
| GTGTGACATAACTTTGGATT+TGG | - | chr3.3:79656779-79656798 | MS.gene049295:intron | 35.0% | |
| TGTCAATTAAATTAGGACGG+AGG | + | chr3.3:79654454-79654473 | None:intergenic | 35.0% | |
| TGTCGACAATTTAATAGCCA+TGG | + | chr3.3:79655732-79655751 | None:intergenic | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr3.3:79654682-79654701 | MS.gene049295:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr3.3:79654701-79654682 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr3.3:79654681-79654700 | MS.gene049295:intron | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr3.3:79654700-79654681 | None:intergenic | 35.0% | |
| ! | ATAACCTTCACTATTTTCGC+CGG | + | chr3.3:79653717-79653736 | None:intergenic | 35.0% |
| ! | CAAAAGCTTCAACCTTTTCT+TGG | - | chr3.3:79655660-79655679 | MS.gene049295:intron | 35.0% |
| ! | CCTTTTCTTGGCTATCATTT+TGG | - | chr3.3:79655672-79655691 | MS.gene049295:intron | 35.0% |
| ! | CTGGAACTACTAAGATTTTG+AGG | - | chr3.3:79655504-79655523 | MS.gene049295:intron | 35.0% |
| ! | GCAACCTATATGCAACTTTT+TGG | + | chr3.3:79656080-79656099 | None:intergenic | 35.0% |
| ! | GGATACAAAAGCATAGCTAA+TGG | - | chr3.3:79656904-79656923 | MS.gene049295:CDS | 35.0% |
| !! | CAAAAGAGGTTTTGGTAGTT+GGG | - | chr3.3:79653819-79653838 | MS.gene049295:intron | 35.0% |
| !! | GTATTGAAGGAATTGGTCTT+TGG | + | chr3.3:79653534-79653553 | None:intergenic | 35.0% |
| !! | TCAAAAGAGGTTTTGGTAGT+TGG | - | chr3.3:79653818-79653837 | MS.gene049295:intron | 35.0% |
| ACTTTGGATTTGGATGTCAC+AGG | - | chr3.3:79656789-79656808 | MS.gene049295:intron | 40.0% | |
| AGATAACATGCAATAAGGGG+GGG | + | chr3.3:79655207-79655226 | None:intergenic | 40.0% | |
| ATAGCATCCACAACATCAAC+CGG | + | chr3.3:79656377-79656396 | None:intergenic | 40.0% | |
| ATGAAGTTAGAGACAGATGG+AGG | - | chr3.3:79653624-79653643 | MS.gene049295:CDS | 40.0% | |
| ATGCTATCGAGCCAACATAA+TGG | + | chr3.3:79655004-79655023 | None:intergenic | 40.0% | |
| CGGTATTTATCGTCCCAAAT+TGG | - | chr3.3:79656442-79656461 | MS.gene049295:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr3.3:79654794-79654813 | MS.gene049295:intron | 40.0% | |
| GAGTTGTAAAGGTCCCAATT+TGG | + | chr3.3:79656459-79656478 | None:intergenic | 40.0% | |
| GATAAAAGTAGTACTCCCTC+CGG | - | chr3.3:79654547-79654566 | MS.gene049295:intron | 40.0% | |
| GCGAATGGTGAATTATTTGC+CGG | - | chr3.3:79656355-79656374 | MS.gene049295:intron | 40.0% | |
| GCTTCTAACATGGAAAAGTG+CGG | - | chr3.3:79654869-79654888 | MS.gene049295:intron | 40.0% | |
| GGTTATATTCCTAATGTGCC+TGG | - | chr3.3:79653731-79653750 | MS.gene049295:intron | 40.0% | |
| GTAAAAGTTGGACTTTCCCA+TGG | + | chr3.3:79655058-79655077 | None:intergenic | 40.0% | |
| TTAATAGCCATGGAGATCTG+AGG | + | chr3.3:79655722-79655741 | None:intergenic | 40.0% | |
| TTACAACTCAAGAACGTGAC+AGG | - | chr3.3:79656470-79656489 | MS.gene049295:intron | 40.0% | |
| TTATGAGGCAAAGCTTCTTG+TGG | - | chr3.3:79653685-79653704 | MS.gene049295:intron | 40.0% | |
| ! | ACAAAAGCATAGCTAATGGG+TGG | - | chr3.3:79656908-79656927 | MS.gene049295:CDS | 40.0% |
| ! | ACTGGATAACTTTGAAGGAG+AGG | - | chr3.3:79653754-79653773 | MS.gene049295:intron | 40.0% |
| ! | ATAGCATTTAGGGTTTGGGT+AGG | - | chr3.3:79655017-79655036 | MS.gene049295:intron | 40.0% |
| ! | CTCGATAGCATTTAGGGTTT+GGG | - | chr3.3:79655013-79655032 | MS.gene049295:intron | 40.0% |
| ! | GGGAAAGATTTTCCCACTAT+AGG | + | chr3.3:79656166-79656185 | None:intergenic | 40.0% |
| ! | GTCACGTTCTTGAGTTGTAA+AGG | + | chr3.3:79656470-79656489 | None:intergenic | 40.0% |
| ! | TAGCATTTAGGGTTTGGGTA+GGG | - | chr3.3:79655018-79655037 | MS.gene049295:intron | 40.0% |
| ! | TTATTTGCCGGTTGATGTTG+TGG | - | chr3.3:79656367-79656386 | MS.gene049295:intron | 40.0% |
| ! | TTTTATGCCTCAGATCTCCA+TGG | - | chr3.3:79655712-79655731 | MS.gene049295:intron | 40.0% |
| !! | ACGGAGGGAGTACAATATTT+TGG | - | chr3.3:79654817-79654836 | MS.gene049295:intron | 40.0% |
| !! | ATGTTGGCTCGATAGCATTT+AGG | - | chr3.3:79655006-79655025 | MS.gene049295:intron | 40.0% |
| !! | CAATTTTCTGGGTTGGGTTT+TGG | - | chr3.3:79655827-79655846 | MS.gene049295:intron | 40.0% |
| !! | GAAGGAATTGGTCTTTGGAT+AGG | + | chr3.3:79653529-79653548 | None:intergenic | 40.0% |
| !! | GAATTGGTCTTTGGATAGGT+AGG | + | chr3.3:79653525-79653544 | None:intergenic | 40.0% |
| !! | TGTTGGCTCGATAGCATTTA+GGG | - | chr3.3:79655007-79655026 | MS.gene049295:intron | 40.0% |
| AAAATGCTTACCCGAGCCAT+TGG | - | chr3.3:79657147-79657166 | MS.gene049295:CDS | 45.0% | |
| AAAATGGCCAAGATGCATGG+TGG | + | chr3.3:79655559-79655578 | None:intergenic | 45.0% | |
| AAAGTTGGACTTTCCCATGG+TGG | + | chr3.3:79655055-79655074 | None:intergenic | 45.0% | |
| AAATGGCCAAGATGCATGGT+GGG | + | chr3.3:79655558-79655577 | None:intergenic | 45.0% | |
| AAGTTGGACTTTCCCATGGT+GGG | + | chr3.3:79655054-79655073 | None:intergenic | 45.0% | |
| AGGAAAATGGCCAAGATGCA+TGG | + | chr3.3:79655562-79655581 | None:intergenic | 45.0% | |
| CCTTCAAAGTTATCCAGTCC+AGG | + | chr3.3:79653752-79653771 | None:intergenic | 45.0% | |
| GACTTCGAACGACAATAGAC+GGG | + | chr3.3:79653898-79653917 | None:intergenic | 45.0% | |
| GGACTTCGAACGACAATAGA+CGG | + | chr3.3:79653899-79653918 | None:intergenic | 45.0% | |
| GGGACGATAAATACCGTACT+TGG | + | chr3.3:79656438-79656457 | None:intergenic | 45.0% | |
| GGTCTTTGGATAGGTAGGTT+GGG | + | chr3.3:79653520-79653539 | None:intergenic | 45.0% | |
| GTCTATTGTCGTTCGAAGTC+CGG | - | chr3.3:79653898-79653917 | MS.gene049295:CDS | 45.0% | |
| TAACATGGTGGCATTTAGGG+TGG | + | chr3.3:79656193-79656212 | None:intergenic | 45.0% | |
| TACGGTGATCTGTCCAAGTA+CGG | - | chr3.3:79656422-79656441 | MS.gene049295:intron | 45.0% | |
| TATTCCTAATGTGCCTGGAC+TGG | - | chr3.3:79653736-79653755 | MS.gene049295:intron | 45.0% | |
| TCAACTGTGCGACAATAACG+AGG | + | chr3.3:79653590-79653609 | None:intergenic | 45.0% | |
| TGCCAGCTGTAGGTAAAAGT+TGG | + | chr3.3:79655070-79655089 | None:intergenic | 45.0% | |
| TGGTCTTTGGATAGGTAGGT+TGG | + | chr3.3:79653521-79653540 | None:intergenic | 45.0% | |
| TTATCCAGTCCAGGCACATT+AGG | + | chr3.3:79653743-79653762 | None:intergenic | 45.0% | |
| ! | AACATGGTGGCATTTAGGGT+GGG | + | chr3.3:79656192-79656211 | None:intergenic | 45.0% |
| ! | AGCATTTAGGGTTTGGGTAG+GGG | - | chr3.3:79655019-79655038 | MS.gene049295:intron | 45.0% |
| ! | CATAGCTAATGGGTGGCTTA+AGG | - | chr3.3:79656915-79656934 | MS.gene049295:CDS | 45.0% |
| ! | CCTGGACTGGATAACTTTGA+AGG | - | chr3.3:79653749-79653768 | MS.gene049295:intron | 45.0% |
| ! | GATCATGGATTATACTGCGC+AGG | - | chr3.3:79657176-79657195 | MS.gene049295:CDS | 45.0% |
| ! | GCTCGATAGCATTTAGGGTT+TGG | - | chr3.3:79655012-79655031 | MS.gene049295:intron | 45.0% |
| ! | GGATAACTTTGAAGGAGAGG+TGG | - | chr3.3:79653757-79653776 | MS.gene049295:intron | 45.0% |
| ! | GGGAAAGATTTTCCCACCAT+GGG | - | chr3.3:79655039-79655058 | MS.gene049295:intron | 45.0% |
| ! | GGTTTAGGGTGCTTCTAACA+TGG | - | chr3.3:79654325-79654344 | MS.gene049295:CDS | 45.0% |
| ! | GTCCAACTTTTACCTACAGC+TGG | - | chr3.3:79655065-79655084 | MS.gene049295:intron | 45.0% |
| !!! | TGGCTCGGGTAAGCATTTTT+TGG | + | chr3.3:79657146-79657165 | None:intergenic | 45.0% |
| !!! | TTCTGGGTTGGGTTTTGGAA+AGG | - | chr3.3:79655832-79655851 | MS.gene049295:intron | 45.0% |
| !! | AATTAGAATTAAAAATAAAT+AGG | + | chr3.3:79655888-79655907 | None:intergenic | 5.0% |
| !! | ATTAGAATTAAAAATAAATA+GGG | + | chr3.3:79655887-79655906 | None:intergenic | 5.0% |
| !! | TTAAAATAATAATATATCAA+TGG | - | chr3.3:79656124-79656143 | MS.gene049295:intron | 5.0% |
| !! | TTTATTTAAAAATTTAATGA+CGG | - | chr3.3:79654085-79654104 | MS.gene049295:intron | 5.0% |
| !!! | ATATTATTATTTTAAATCAA+TGG | + | chr3.3:79656119-79656138 | None:intergenic | 5.0% |
| !!! | TTATAATTTTTTCAATTTTT+TGG | + | chr3.3:79655293-79655312 | None:intergenic | 5.0% |
| !!! | TTTTTATATTATCAAATATT+AGG | - | chr3.3:79655132-79655151 | MS.gene049295:intron | 5.0% |
| ACTAGCAAGGAGAGGCTTGT+GGG | - | chr3.3:79657199-79657218 | MS.gene049295:CDS | 50.0% | |
| ACTGCTTGATCTCGTGTGAG+TGG | - | chr3.3:79655481-79655500 | MS.gene049295:intron | 50.0% | |
| AGGTTATAGCTGCCAGCTGT+AGG | + | chr3.3:79655080-79655099 | None:intergenic | 50.0% | |
| ATATTGTACTCCCTCCGTCC+CGG | + | chr3.3:79654815-79654834 | None:intergenic | 50.0% | |
| ATCCATGATCCCCCTTCCAA+TGG | + | chr3.3:79657166-79657185 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr3.3:79654798-79654817 | MS.gene049295:intron | 50.0% | |
| CACACGAGATCAAGCAGTAG+TGG | + | chr3.3:79655479-79655498 | None:intergenic | 50.0% | |
| CTAGTTCCCACCATGCATCT+TGG | - | chr3.3:79655549-79655568 | MS.gene049295:intron | 50.0% | |
| GATGCAATCGTATTCGCGAC+TGG | - | chr3.3:79656883-79656902 | MS.gene049295:CDS | 50.0% | |
| GATTCGTCAAGGGATGCGAA+TGG | - | chr3.3:79656340-79656359 | MS.gene049295:intron | 50.0% | |
| GGATGCAGAGTCAATTGCAG+AGG | - | chr3.3:79657232-79657251 | MS.gene049295:CDS | 50.0% | |
| GTAGTTGGGTGTGGTAACTC+AGG | - | chr3.3:79653833-79653852 | MS.gene049295:intron | 50.0% | |
| TGGGTGTGGTAACTCAGGAA+TGG | - | chr3.3:79653838-79653857 | MS.gene049295:intron | 50.0% | |
| ! | ACCTTCACTATTTTCGCCGG+TGG | + | chr3.3:79653714-79653733 | None:intergenic | 50.0% |
| ! | CAAGATGCATGGTGGGAACT+AGG | + | chr3.3:79655551-79655570 | None:intergenic | 50.0% |
| ! | GGGGAAAGATTTTCCCACCA+TGG | - | chr3.3:79655038-79655057 | MS.gene049295:intron | 50.0% |
| ! | TATACTGCGCAGGACTAGCA+AGG | - | chr3.3:79657186-79657205 | MS.gene049295:CDS | 50.0% |
| ! | TGCATGGTGGGAACTAGGAA+TGG | + | chr3.3:79655546-79655565 | None:intergenic | 50.0% |
| !! | GAGGTTTTGGTAGTTGGGTG+TGG | - | chr3.3:79653824-79653843 | MS.gene049295:intron | 50.0% |
| AAGCTTCTTGTGGTCGCCAC+CGG | - | chr3.3:79653695-79653714 | MS.gene049295:intron | 55.0% | |
| ACATGCAATAAGGGGGGGTG+TGG | + | chr3.3:79655202-79655221 | None:intergenic | 55.0% | |
| AGCCATTGGAAGGGGGATCA+TGG | - | chr3.3:79657161-79657180 | MS.gene049295:CDS | 55.0% | |
| AGGCTTGTGGGGAGTCAAGA+TGG | - | chr3.3:79657211-79657230 | MS.gene049295:CDS | 55.0% | |
| CTAGCAAGGAGAGGCTTGTG+GGG | - | chr3.3:79657200-79657219 | MS.gene049295:CDS | 55.0% | |
| CTTACCCGAGCCATTGGAAG+GGG | - | chr3.3:79657153-79657172 | MS.gene049295:CDS | 55.0% | |
| CTTGATCTCGTGTGAGTGGC+TGG | - | chr3.3:79655485-79655504 | MS.gene049295:intron | 55.0% | |
| GACTAGCAAGGAGAGGCTTG+TGG | - | chr3.3:79657198-79657217 | MS.gene049295:CDS | 55.0% | |
| GCCACCGGCGAAAATAGTGA+AGG | - | chr3.3:79653710-79653729 | MS.gene049295:intron | 55.0% | |
| GCTTACCCGAGCCATTGGAA+GGG | - | chr3.3:79657152-79657171 | MS.gene049295:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr3.3:79654802-79654821 | MS.gene049295:intron | 55.0% | |
| TGATCCCCCTTCCAATGGCT+CGG | + | chr3.3:79657161-79657180 | None:intergenic | 55.0% | |
| TGCTTACCCGAGCCATTGGA+AGG | - | chr3.3:79657151-79657170 | MS.gene049295:CDS | 55.0% | |
| TTACCCGAGCCATTGGAAGG+GGG | - | chr3.3:79657154-79657173 | MS.gene049295:CDS | 55.0% | |
| ! | GATAGGTAGGTTGGGCCTGA+GGG | + | chr3.3:79653512-79653531 | None:intergenic | 55.0% |
| ! | GGTGGCATTTAGGGTGGGTA+GGG | + | chr3.3:79656187-79656206 | None:intergenic | 55.0% |
| ! | GTGGCATTTAGGGTGGGTAG+GGG | + | chr3.3:79656186-79656205 | None:intergenic | 55.0% |
| ! | TGGTGGCATTTAGGGTGGGT+AGG | + | chr3.3:79656188-79656207 | None:intergenic | 55.0% |
| GATCCCCCTTCCAATGGCTC+GGG | + | chr3.3:79657160-79657179 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr3.3:79654801-79654820 | MS.gene049295:intron | 60.0% | |
| ! | GGATAGGTAGGTTGGGCCTG+AGG | + | chr3.3:79653513-79653532 | None:intergenic | 60.0% |
| ! | TGCGCAGGACTAGCAAGGAG+AGG | - | chr3.3:79657191-79657210 | MS.gene049295:CDS | 60.0% |
| ! | AGGTAGGTTGGGCCTGAGGG+TGG | + | chr3.3:79653509-79653528 | None:intergenic | 65.0% |
| ! | GGTAGGTTGGGCCTGAGGGT+GGG | + | chr3.3:79653508-79653527 | None:intergenic | 65.0% |
| GTTGGGCCTGAGGGTGGGTG+AGG | + | chr3.3:79653503-79653522 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79653497 | 79657286 | 79653497 | ID=MS.gene049295 |
| chr3.3 | mRNA | 79653497 | 79657286 | 79653497 | ID=MS.gene049295.t1;Parent=MS.gene049295 |
| chr3.3 | exon | 79656864 | 79657286 | 79656864 | ID=MS.gene049295.t1.exon1;Parent=MS.gene049295.t1 |
| chr3.3 | CDS | 79656864 | 79657286 | 79656864 | ID=cds.MS.gene049295.t1;Parent=MS.gene049295.t1 |
| chr3.3 | exon | 79654233 | 79654466 | 79654233 | ID=MS.gene049295.t1.exon2;Parent=MS.gene049295.t1 |
| chr3.3 | CDS | 79654233 | 79654466 | 79654233 | ID=cds.MS.gene049295.t1;Parent=MS.gene049295.t1 |
| chr3.3 | exon | 79653847 | 79653972 | 79653847 | ID=MS.gene049295.t1.exon3;Parent=MS.gene049295.t1 |
| chr3.3 | CDS | 79653847 | 79653972 | 79653847 | ID=cds.MS.gene049295.t1;Parent=MS.gene049295.t1 |
| chr3.3 | exon | 79653497 | 79653673 | 79653497 | ID=MS.gene049295.t1.exon4;Parent=MS.gene049295.t1 |
| chr3.3 | CDS | 79653497 | 79653673 | 79653497 | ID=cds.MS.gene049295.t1;Parent=MS.gene049295.t1 |
| Gene Sequence |
| Protein sequence |
