Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014685.t1 | XP_003603602.1 | 96.9 | 425 | 11 | 1 | 1 | 425 | 1 | 423 | 9.70E-243 | 849 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014685.t1 | Q8VZ59 | 69.5 | 419 | 113 | 4 | 1 | 416 | 1 | 407 | 5.1e-168 | 592.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014685.t1 | G7J3E6 | 96.9 | 425 | 11 | 1 | 1 | 425 | 1 | 423 | 7.0e-243 | 849.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014685 | MS.gene06418 | PPI |
| MS.gene015953 | MS.gene014685 | PPI |
| MS.gene94810 | MS.gene014685 | PPI |
| MS.gene014685 | MS.gene60245 | PPI |
| MS.gene014685 | MS.gene53594 | PPI |
| MS.gene86173 | MS.gene014685 | PPI |
| MS.gene014685 | MS.gene061851 | PPI |
| MS.gene014685 | MS.gene054944 | PPI |
| MS.gene64265 | MS.gene014685 | PPI |
| MS.gene36879 | MS.gene014685 | PPI |
| MS.gene09884 | MS.gene014685 | PPI |
| MS.gene014685 | MS.gene064951 | PPI |
| MS.gene059027 | MS.gene014685 | PPI |
| MS.gene44332 | MS.gene014685 | PPI |
| MS.gene014685 | MS.gene44331 | PPI |
| MS.gene049295 | MS.gene014685 | PPI |
| MS.gene51580 | MS.gene014685 | PPI |
| MS.gene57685 | MS.gene014685 | PPI |
| MS.gene019484 | MS.gene014685 | PPI |
| MS.gene027681 | MS.gene014685 | PPI |
| MS.gene61665 | MS.gene014685 | PPI |
| MS.gene24021 | MS.gene014685 | PPI |
| MS.gene013322 | MS.gene014685 | PPI |
| MS.gene014685 | MS.gene038029 | PPI |
| MS.gene018590 | MS.gene014685 | PPI |
| MS.gene29205 | MS.gene014685 | PPI |
| MS.gene23537 | MS.gene014685 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014685.t1 | MTR_3g109520 | 96.941 | 425 | 11 | 1 | 1 | 425 | 1 | 423 | 0.0 | 849 |
| MS.gene014685.t1 | MTR_1g008380 | 76.887 | 424 | 96 | 2 | 1 | 423 | 1 | 423 | 0.0 | 661 |
| MS.gene014685.t1 | MTR_6g086870 | 66.667 | 396 | 129 | 1 | 22 | 414 | 1 | 396 | 0.0 | 559 |
| MS.gene014685.t1 | MTR_1g069275 | 61.000 | 400 | 152 | 3 | 25 | 423 | 9 | 405 | 0.0 | 510 |
| MS.gene014685.t1 | MTR_7g099330 | 59.949 | 392 | 149 | 3 | 33 | 423 | 16 | 400 | 3.78e-174 | 493 |
| MS.gene014685.t1 | MTR_1g046230 | 59.391 | 394 | 157 | 2 | 32 | 423 | 15 | 407 | 4.64e-173 | 491 |
| MS.gene014685.t1 | MTR_1g011630 | 59.788 | 378 | 147 | 3 | 36 | 413 | 11 | 383 | 9.83e-171 | 484 |
| MS.gene014685.t1 | MTR_7g099160 | 57.595 | 316 | 126 | 3 | 109 | 423 | 213 | 521 | 9.50e-126 | 374 |
| MS.gene014685.t1 | MTR_7g107690 | 44.974 | 378 | 202 | 2 | 42 | 418 | 9 | 381 | 2.63e-120 | 355 |
| MS.gene014685.t1 | MTR_8g432640 | 45.845 | 373 | 196 | 2 | 42 | 413 | 7 | 374 | 2.68e-120 | 355 |
| MS.gene014685.t1 | MTR_5g033260 | 45.576 | 373 | 197 | 2 | 42 | 413 | 7 | 374 | 9.80e-119 | 351 |
| MS.gene014685.t1 | MTR_7g107710 | 46.354 | 384 | 198 | 4 | 42 | 423 | 7 | 384 | 9.91e-119 | 351 |
| MS.gene014685.t1 | MTR_3g088925 | 43.636 | 385 | 211 | 2 | 42 | 425 | 8 | 387 | 3.14e-115 | 343 |
| MS.gene014685.t1 | MTR_3g088945 | 43.377 | 385 | 212 | 2 | 42 | 425 | 8 | 387 | 1.90e-114 | 340 |
| MS.gene014685.t1 | MTR_3g088955 | 43.636 | 385 | 211 | 2 | 42 | 425 | 8 | 387 | 1.15e-113 | 339 |
| MS.gene014685.t1 | MTR_4g051642 | 43.421 | 380 | 208 | 3 | 42 | 420 | 8 | 381 | 4.92e-112 | 335 |
| MS.gene014685.t1 | MTR_3g096030 | 39.205 | 176 | 83 | 1 | 42 | 217 | 7 | 158 | 1.94e-39 | 139 |
| MS.gene014685.t1 | MTR_3g437580 | 25.769 | 260 | 147 | 7 | 43 | 267 | 15 | 263 | 3.86e-17 | 82.8 |
| MS.gene014685.t1 | MTR_8g037880 | 25.943 | 212 | 124 | 6 | 43 | 226 | 6 | 212 | 5.32e-17 | 83.2 |
| MS.gene014685.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 5.58e-17 | 80.9 |
| MS.gene014685.t1 | MTR_3g437580 | 25.000 | 240 | 135 | 6 | 43 | 247 | 15 | 244 | 8.37e-17 | 82.4 |
| MS.gene014685.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 9.23e-17 | 81.3 |
| MS.gene014685.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 2.05e-16 | 81.3 |
| MS.gene014685.t1 | MTR_2g450310 | 28.800 | 250 | 132 | 13 | 43 | 251 | 7 | 251 | 7.08e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014685.t1 | AT5G25620 | 68.471 | 425 | 119 | 4 | 1 | 422 | 1 | 413 | 0.0 | 590 |
| MS.gene014685.t1 | AT5G25620 | 68.471 | 425 | 119 | 4 | 1 | 422 | 1 | 413 | 0.0 | 589 |
| MS.gene014685.t1 | AT4G13260 | 65.770 | 409 | 128 | 1 | 7 | 415 | 6 | 402 | 0.0 | 557 |
| MS.gene014685.t1 | AT4G28720 | 58.706 | 402 | 162 | 3 | 25 | 423 | 9 | 409 | 1.11e-176 | 500 |
| MS.gene014685.t1 | AT1G04610 | 57.357 | 401 | 167 | 2 | 26 | 423 | 22 | 421 | 8.02e-172 | 488 |
| MS.gene014685.t1 | AT1G04180 | 60.560 | 393 | 151 | 4 | 31 | 422 | 15 | 404 | 2.07e-171 | 486 |
| MS.gene014685.t1 | AT5G43890 | 59.750 | 400 | 157 | 4 | 27 | 423 | 10 | 408 | 5.88e-171 | 486 |
| MS.gene014685.t1 | AT5G11320 | 59.791 | 383 | 147 | 2 | 31 | 413 | 7 | 382 | 1.18e-170 | 484 |
| MS.gene014685.t1 | AT2G33230 | 60.660 | 394 | 150 | 2 | 33 | 423 | 24 | 415 | 1.90e-170 | 484 |
| MS.gene014685.t1 | AT4G32540 | 56.061 | 396 | 165 | 4 | 19 | 413 | 1 | 388 | 1.16e-162 | 464 |
| MS.gene014685.t1 | AT4G32540 | 56.030 | 398 | 164 | 5 | 19 | 413 | 1 | 390 | 3.00e-161 | 461 |
| MS.gene014685.t1 | AT4G13260 | 64.780 | 318 | 100 | 1 | 7 | 324 | 6 | 311 | 4.86e-148 | 423 |
| MS.gene014685.t1 | AT5G11320 | 59.760 | 333 | 128 | 1 | 31 | 363 | 7 | 333 | 3.15e-147 | 423 |
| MS.gene014685.t1 | AT4G13260 | 68.493 | 292 | 92 | 0 | 124 | 415 | 8 | 299 | 2.36e-142 | 409 |
| MS.gene014685.t1 | AT1G21430 | 49.202 | 376 | 180 | 5 | 42 | 414 | 10 | 377 | 1.01e-124 | 367 |
| MS.gene014685.t1 | AT1G48910 | 45.358 | 377 | 200 | 2 | 42 | 417 | 6 | 377 | 1.94e-120 | 355 |
| MS.gene014685.t1 | AT5G07800 | 26.840 | 231 | 135 | 6 | 30 | 226 | 5 | 235 | 1.70e-17 | 84.7 |
| MS.gene014685.t1 | AT5G61290 | 28.326 | 233 | 122 | 8 | 43 | 234 | 18 | 246 | 3.00e-17 | 84.0 |
| MS.gene014685.t1 | AT1G12140 | 27.586 | 261 | 144 | 8 | 33 | 259 | 5 | 254 | 1.55e-14 | 75.5 |
| MS.gene014685.t1 | AT1G12140 | 27.586 | 261 | 144 | 8 | 33 | 259 | 5 | 254 | 1.55e-14 | 75.5 |
| MS.gene014685.t1 | AT1G65860 | 27.103 | 214 | 122 | 7 | 43 | 226 | 15 | 224 | 7.33e-14 | 73.6 |
| MS.gene014685.t1 | AT1G62620 | 24.766 | 214 | 131 | 5 | 43 | 226 | 15 | 228 | 2.48e-13 | 71.6 |
| MS.gene014685.t1 | AT1G62620 | 24.766 | 214 | 131 | 5 | 43 | 226 | 15 | 228 | 5.18e-13 | 70.9 |
| MS.gene014685.t1 | AT1G63370 | 24.299 | 214 | 132 | 5 | 43 | 226 | 15 | 228 | 5.33e-13 | 70.1 |
| MS.gene014685.t1 | AT1G12130 | 25.000 | 200 | 119 | 6 | 57 | 226 | 29 | 227 | 7.67e-13 | 70.5 |
| MS.gene014685.t1 | AT1G63370 | 24.299 | 214 | 132 | 5 | 43 | 226 | 15 | 228 | 1.13e-12 | 69.7 |
| MS.gene014685.t1 | AT1G12200 | 25.490 | 204 | 117 | 6 | 57 | 227 | 30 | 231 | 2.14e-12 | 68.6 |
| MS.gene014685.t1 | AT1G12200 | 25.490 | 204 | 117 | 6 | 57 | 227 | 30 | 231 | 2.55e-12 | 68.9 |
| MS.gene014685.t1 | AT1G12140 | 27.203 | 261 | 143 | 9 | 33 | 259 | 5 | 252 | 6.73e-12 | 67.4 |
| MS.gene014685.t1 | AT1G12160 | 23.750 | 240 | 145 | 8 | 43 | 254 | 14 | 243 | 8.18e-12 | 67.4 |
Find 96 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGTGAATTACCCTTTA+TGG | 0.057569 | 3.1:+87260938 | MS.gene014685:CDS |
| GTTGTTGGTTGTGGTAATTC+TGG | 0.228655 | 3.1:+87261293 | MS.gene014685:CDS |
| GCTGAATTTGATGGTAAAAT+TGG | 0.229798 | 3.1:+87261074 | MS.gene014685:CDS |
| ATTGAAGGTGTAGATGAATT+TGG | 0.230080 | 3.1:+87261206 | MS.gene014685:CDS |
| TGCTAGGAAAATCAACTTTC+GGG | 0.237487 | 3.1:+87262300 | MS.gene014685:CDS |
| GGTAATTCACAGAATTGTTT+TGG | 0.279240 | 3.1:-87260930 | None:intergenic |
| AATGTGTCCACCTTTAATTT+TGG | 0.293841 | 3.1:-87262501 | None:intergenic |
| GAAGATTATGCAGAGAGTTT+TGG | 0.298205 | 3.1:+87261017 | MS.gene014685:CDS |
| CTAATTGCGTGGCTTCATTA+TGG | 0.299082 | 3.1:+87260871 | MS.gene014685:CDS |
| ATGAATTTGGAGGGGTTATA+AGG | 0.303286 | 3.1:+87261219 | MS.gene014685:CDS |
| TGGGTTGGATCGTCCTCGTT+TGG | 0.307911 | 3.1:+87262418 | MS.gene014685:CDS |
| GGTACCCTTGCCAAAATTAA+AGG | 0.309195 | 3.1:+87262491 | MS.gene014685:CDS |
| AATTAAAGGTGGACACATTA+AGG | 0.324307 | 3.1:+87262505 | MS.gene014685:CDS |
| TTCTCTTGTTGTTCGAGATT+CGG | 0.332436 | 3.1:+87261358 | MS.gene014685:CDS |
| GGTTCTTGCTCATAGTTTCA+TGG | 0.338911 | 3.1:+87262369 | MS.gene014685:CDS |
| GTTTAGAGGGAAGAAAGTTT+TGG | 0.342078 | 3.1:+87261271 | MS.gene014685:CDS |
| TCATCTACACCTTCAATATT+AGG | 0.342806 | 3.1:-87261200 | None:intergenic |
| ATCGTAGGAGCAGGACCTTC+TGG | 0.343082 | 3.1:+87260789 | MS.gene014685:CDS |
| CCACTTGGAAATGGCTTCAT+AGG | 0.347378 | 3.1:-87264999 | None:intergenic |
| ATGCTAGGAAAATCAACTTT+CGG | 0.354338 | 3.1:+87262299 | MS.gene014685:CDS |
| GGGACTGCAAGGTGCCTCTA+TGG | 0.365215 | 3.1:+87265067 | MS.gene014685:CDS |
| CCTTTCCACCCACTTGGAAA+TGG | 0.368720 | 3.1:-87265008 | None:intergenic |
| ATCTGAGGGGAATTCCATAA+AGG | 0.386429 | 3.1:-87260952 | None:intergenic |
| ACAAAAGCAATGTTCCCTAT+TGG | 0.386603 | 3.1:+87263619 | MS.gene014685:CDS |
| GGGTTGGATCGTCCTCGTTT+GGG | 0.392628 | 3.1:+87262419 | MS.gene014685:CDS |
| ATATCATACCTTGAGCCAAT+AGG | 0.393501 | 3.1:-87263634 | None:intergenic |
| CTTGGTGACACTGCTCAACT+TGG | 0.407645 | 3.1:+87262398 | MS.gene014685:CDS |
| GGAAGAGGATATGTTCTCTA+AGG | 0.414461 | 3.1:+87264965 | MS.gene014685:intron |
| TATCATACCTTGAGCCAATA+GGG | 0.429202 | 3.1:-87263633 | None:intergenic |
| GTTACTCAAGTGGTTTCCAT+TGG | 0.431641 | 3.1:+87262334 | MS.gene014685:CDS |
| TTACTCAAGTGGTTTCCATT+GGG | 0.437213 | 3.1:+87262335 | MS.gene014685:CDS |
| CGTCGTCGCGTGTTTGTTCA+AGG | 0.449077 | 3.1:+87260759 | MS.gene014685:CDS |
| CGGAGAGGTTCTTGAGTTGA+AGG | 0.449506 | 3.1:-87262445 | None:intergenic |
| ATAGTTTCATGGCTTATGCT+TGG | 0.449906 | 3.1:+87262380 | MS.gene014685:CDS |
| TATTGCTTAAGAGAGTTAGA+AGG | 0.452128 | 3.1:+87260669 | MS.gene014685:CDS |
| TTCCATTGGGACTTGTCGAT+CGG | 0.454350 | 3.1:+87262348 | MS.gene014685:CDS |
| GATGGCATCATATTGGCAAC+CGG | 0.459043 | 3.1:+87263594 | MS.gene014685:CDS |
| GTGCAAAATGCTGAATTTGA+TGG | 0.462235 | 3.1:+87261065 | MS.gene014685:CDS |
| TTGATGGTAAAATTGGTTGT+TGG | 0.471687 | 3.1:+87261081 | MS.gene014685:CDS |
| CACACAGTGGAATTCGTAGA+TGG | 0.480947 | 3.1:+87263555 | MS.gene014685:CDS |
| AAAAGTGGTGAAGAGTTTAG+AGG | 0.487823 | 3.1:+87261257 | MS.gene014685:CDS |
| TCTGAGGGGAATTCCATAAA+GGG | 0.494865 | 3.1:-87260951 | None:intergenic |
| AAAGTGGTGAAGAGTTTAGA+GGG | 0.496476 | 3.1:+87261258 | MS.gene014685:CDS |
| TGACACTGCTCAACTTGGGT+TGG | 0.497517 | 3.1:+87262403 | MS.gene014685:CDS |
| AATGTCATCAGCTATTCTCT+TGG | 0.503005 | 3.1:-87265093 | None:intergenic |
| TGGTTGTGGTAATTCTGGTA+TGG | 0.510440 | 3.1:+87261298 | MS.gene014685:CDS |
| ACAACAGTTCATAAAGTACT+TGG | 0.510479 | 3.1:+87260995 | MS.gene014685:CDS |
| TGTCCATGTGGTTACTCAAG+TGG | 0.513763 | 3.1:+87262324 | MS.gene014685:CDS |
| GATATGTTCTCTAAGGAAGA+TGG | 0.515584 | 3.1:+87264972 | MS.gene014685:CDS |
| CGTTGGTTGATCGTTGCGAC+CGG | 0.515903 | 3.1:+87261155 | MS.gene014685:CDS |
| CTACGGAATATGTTTGTCGT+TGG | 0.522172 | 3.1:+87261138 | MS.gene014685:CDS |
| CATACAAGTTTGTATAAAAG+TGG | 0.522680 | 3.1:+87261242 | MS.gene014685:CDS |
| TCGCGTGTTTGTTCAAGGAC+CGG | 0.525756 | 3.1:+87260764 | MS.gene014685:CDS |
| GAAGGTGTAGATGAATTTGG+AGG | 0.528940 | 3.1:+87261209 | MS.gene014685:CDS |
| AAGGTGTAGATGAATTTGGA+GGG | 0.531621 | 3.1:+87261210 | MS.gene014685:CDS |
| CTTCAACTCAAGAACCTCTC+CGG | 0.537129 | 3.1:+87262446 | MS.gene014685:CDS |
| GGAGAGGTTCTTGAGTTGAA+GGG | 0.547836 | 3.1:-87262444 | None:intergenic |
| TTGGTGACACTGCTCAACTT+GGG | 0.549242 | 3.1:+87262399 | MS.gene014685:CDS |
| GCTGTTGTGCCTAATATTGA+AGG | 0.549425 | 3.1:+87261191 | MS.gene014685:CDS |
| TATTCTCTTGGCATCCATAG+AGG | 0.550970 | 3.1:-87265081 | None:intergenic |
| GGGTATGTTGGGAAATCTGA+GGG | 0.551955 | 3.1:-87260966 | None:intergenic |
| CCATTTCCAAGTGGGTGGAA+AGG | 0.556864 | 3.1:+87265008 | MS.gene014685:CDS |
| CAACTTTCGGGTTGTCCATG+TGG | 0.556906 | 3.1:+87262312 | MS.gene014685:CDS |
| AACAGCTTCTGCATTCTCAC+CGG | 0.560263 | 3.1:-87261174 | None:intergenic |
| TTCCTAGCATCTCTCGTGGT+AGG | 0.560936 | 3.1:-87262286 | None:intergenic |
| GGTCCTGCTCCTACGATCAC+CGG | 0.561323 | 3.1:-87260783 | None:intergenic |
| TAGTAAAGGGGATGTAACTA+CGG | 0.564472 | 3.1:+87261121 | MS.gene014685:CDS |
| AGGTACGACCAAGCATAAAA+CGG | 0.569581 | 3.1:+87263523 | MS.gene014685:intron |
| GGACCGGTGATCGTAGGAGC+AGG | 0.570039 | 3.1:+87260780 | MS.gene014685:CDS |
| CTATGAAGCCATTTCCAAGT+GGG | 0.571956 | 3.1:+87265000 | MS.gene014685:CDS |
| AGGTGTAGATGAATTTGGAG+GGG | 0.583926 | 3.1:+87261211 | MS.gene014685:CDS |
| CAAGAGAAGGAGTAGCATCA+TGG | 0.589521 | 3.1:-87261343 | None:intergenic |
| AGGGTATGTTGGGAAATCTG+AGG | 0.590255 | 3.1:-87260967 | None:intergenic |
| GTTCAAGGACCGGTGATCGT+AGG | 0.596331 | 3.1:+87260774 | MS.gene014685:CDS |
| AGGGTACCCACATCTAAGAC+AGG | 0.599272 | 3.1:-87262476 | None:intergenic |
| GAGAGGTTCTTGAGTTGAAG+GGG | 0.600506 | 3.1:-87262443 | None:intergenic |
| AAAACTCCTGTCTTAGATGT+GGG | 0.603155 | 3.1:+87262470 | MS.gene014685:CDS |
| TGAAGCCATTTCCAAGTGGG+TGG | 0.610400 | 3.1:+87265003 | MS.gene014685:CDS |
| CAATGTTCCCTATTGGCTCA+AGG | 0.610422 | 3.1:+87263626 | MS.gene014685:CDS |
| TGCACTGTCTCATTAAACCG+TGG | 0.610645 | 3.1:-87261047 | None:intergenic |
| AACCGATCGACAAGTCCCAA+TGG | 0.612719 | 3.1:-87262350 | None:intergenic |
| GAATCTCGAACAACAAGAGA+AGG | 0.614342 | 3.1:-87261356 | None:intergenic |
| ACCCTTGCCAAAATTAAAGG+TGG | 0.619165 | 3.1:+87262494 | MS.gene014685:CDS |
| ATGAAGACGTAATCGATCGT+AGG | 0.621938 | 3.1:-87260904 | None:intergenic |
| GATCTTTCTAGTATTACACA+TGG | 0.634588 | 3.1:-87260849 | None:intergenic |
| CAGTGGAATTCGTAGATGGA+AGG | 0.636435 | 3.1:+87263559 | MS.gene014685:CDS |
| TTAGAAGCTGAAGCAAAGCA+TGG | 0.637004 | 3.1:+87265125 | MS.gene014685:CDS |
| GTCCTACCACGAGAGATGCT+AGG | 0.644002 | 3.1:+87262284 | MS.gene014685:CDS |
| CAACAAATCATCATCAACAA+CGG | 0.644186 | 3.1:+87260734 | MS.gene014685:CDS |
| GCAGCTGCTGCTAAACCAGA+AGG | 0.646911 | 3.1:-87260804 | None:intergenic |
| CCTATGAAGCCATTTCCAAG+TGG | 0.662153 | 3.1:+87264999 | MS.gene014685:CDS |
| ACTAGAAAGATCTAATTGCG+TGG | 0.670066 | 3.1:+87260860 | MS.gene014685:CDS |
| AGTTGAAGGGGACCCAAACG+AGG | 0.670978 | 3.1:-87262431 | None:intergenic |
| AAACCACTTGAGTAACCACA+TGG | 0.674308 | 3.1:-87262327 | None:intergenic |
| GGTATGTTGGGAAATCTGAG+GGG | 0.693219 | 3.1:-87260965 | None:intergenic |
| ACGGTTAAAACGTCACACAG+TGG | 0.719614 | 3.1:+87263542 | MS.gene014685:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTATATTATTT+TGG | - | chr3.1:87261723-87261742 | None:intergenic | 0.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr3.1:87263801-87263820 | MS.gene014685:intron | 10.0% |
| !! | AATCTAATGAAAATAATAAT+GGG | - | chr3.1:87263420-87263439 | None:intergenic | 10.0% |
| !! | ATAAATTATATAATATATGC+AGG | + | chr3.1:87264944-87264963 | MS.gene014685:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr3.1:87263800-87263819 | MS.gene014685:intron | 10.0% |
| !! | TAATCTAATGAAAATAATAA+TGG | - | chr3.1:87263421-87263440 | None:intergenic | 10.0% |
| !!! | ATTAATTGTTTCTTATAATA+AGG | + | chr3.1:87263976-87263995 | MS.gene014685:intron | 10.0% |
| !!! | CAATTTTTTTTTTTTTTTGA+AGG | + | chr3.1:87261475-87261494 | MS.gene014685:intron | 10.0% |
| !!! | TAAGAAACAATTAATTTTTT+TGG | - | chr3.1:87263971-87263990 | None:intergenic | 10.0% |
| !!! | TATCATTATTTAATTTACTA+TGG | + | chr3.1:87262237-87262256 | MS.gene014685:intron | 10.0% |
| !!! | TCAAAATTACATTTTTTATT+GGG | - | chr3.1:87261763-87261782 | None:intergenic | 10.0% |
| !!! | TGTACTAAATAAATTTTATT+TGG | + | chr3.1:87264909-87264928 | MS.gene014685:intron | 10.0% |
| !!! | TTCAAAATTACATTTTTTAT+TGG | - | chr3.1:87261764-87261783 | None:intergenic | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+AGG | - | chr3.1:87263765-87263784 | None:intergenic | 15.0% |
| !! | AAATAAGAAACCTAAAAAAT+TGG | - | chr3.1:87261691-87261710 | None:intergenic | 15.0% |
| !! | AAATGGAAATTAATTAAACT+AGG | - | chr3.1:87261668-87261687 | None:intergenic | 15.0% |
| !! | AAATTAATTAAACTAGGTTT+GGG | - | chr3.1:87261662-87261681 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr3.1:87263802-87263821 | MS.gene014685:intron | 15.0% |
| !! | ATAGTACAATAATTAAATGA+TGG | + | chr3.1:87264863-87264882 | MS.gene014685:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3.1:87264014-87264033 | MS.gene014685:intron | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | - | chr3.1:87264221-87264240 | None:intergenic | 15.0% |
| !! | TATAAATAAGAAACTAATAG+TGG | + | chr3.1:87262938-87262957 | MS.gene014685:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3.1:87264013-87264032 | MS.gene014685:intron | 15.0% |
| !! | TGAACAAAAAATTCTAAATA+AGG | - | chr3.1:87261523-87261542 | None:intergenic | 15.0% |
| !! | TTCAAATTTCAATGAAATAT+TGG | - | chr3.1:87262698-87262717 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr3.1:87264181-87264200 | None:intergenic | 15.0% |
| !!! | TTTTATAAATATTTTCTCGA+TGG | + | chr3.1:87262904-87262923 | MS.gene014685:intron | 15.0% |
| !!! | TTTTTTGAACAAATCTATTT+CGG | - | chr3.1:87261896-87261915 | None:intergenic | 15.0% |
| !! | AAAAAAACCTAAAAATCGAT+TGG | + | chr3.1:87263488-87263507 | MS.gene014685:intron | 20.0% |
| !! | AAAGCATAAAGGAAATAATT+AGG | - | chr3.1:87262966-87262985 | None:intergenic | 20.0% |
| !! | AAATGGAATGAAATAATCAT+TGG | - | chr3.1:87264357-87264376 | None:intergenic | 20.0% |
| !! | AATTGTGACCAAATTAAAAT+AGG | - | chr3.1:87264797-87264816 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr3.1:87264046-87264065 | MS.gene014685:intron | 20.0% |
| !! | ATATATAAAAAAGAGAGAGA+AGG | - | chr3.1:87263011-87263030 | None:intergenic | 20.0% |
| !! | ATTAAAAATCAAATTTGTGG+AGG | - | chr3.1:87261795-87261814 | None:intergenic | 20.0% |
| !! | ATTGTGACCAAATTAAAATA+GGG | - | chr3.1:87264796-87264815 | None:intergenic | 20.0% |
| !! | ATTTCAGATATAAAGATGTT+TGG | + | chr3.1:87264814-87264833 | MS.gene014685:intron | 20.0% |
| !! | GAAATTAATTAAACTAGGTT+TGG | - | chr3.1:87261663-87261682 | None:intergenic | 20.0% |
| !! | GAGATTAAAAATCAAATTTG+TGG | - | chr3.1:87261798-87261817 | None:intergenic | 20.0% |
| !! | GCTAATCAACAAAAAAAAAT+TGG | + | chr3.1:87263167-87263186 | MS.gene014685:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr3.1:87264047-87264066 | MS.gene014685:intron | 20.0% |
| !! | TACAAAACAACCAATTAAAA+AGG | - | chr3.1:87261612-87261631 | None:intergenic | 20.0% |
| !! | TTCATTAGATTAGATTGTTA+GGG | + | chr3.1:87263429-87263448 | MS.gene014685:intron | 20.0% |
| !! | TTTCATTAGATTAGATTGTT+AGG | + | chr3.1:87263428-87263447 | MS.gene014685:intron | 20.0% |
| !!! | ACTAATTTGATTTGATAGAA+AGG | - | chr3.1:87262548-87262567 | None:intergenic | 20.0% |
| !!! | AGAAGAACATTTTTCTTAAA+GGG | - | chr3.1:87264540-87264559 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTTGTAAATGA+AGG | + | chr3.1:87262256-87262275 | MS.gene014685:intron | 20.0% |
| !!! | ATTTCCATTTCCAATTTTTT+AGG | + | chr3.1:87261678-87261697 | MS.gene014685:intron | 20.0% |
| !!! | ATTTCTACTTCCTTTTTAAT+TGG | + | chr3.1:87261599-87261618 | MS.gene014685:intron | 20.0% |
| !!! | CTAATTTGATTTGATAGAAA+GGG | - | chr3.1:87262547-87262566 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr3.1:87264083-87264102 | MS.gene014685:intron | 20.0% |
| !!! | GAGAAGAAAAAATTGTTTTA+TGG | + | chr3.1:87261438-87261457 | MS.gene014685:intron | 20.0% |
| !!! | GTCAACTTTTTCTTATAATA+AGG | - | chr3.1:87263877-87263896 | None:intergenic | 20.0% |
| !!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr3.1:87263882-87263901 | MS.gene014685:intron | 20.0% |
| !!! | TCCATTTCTTTATTTTTTCT+TGG | + | chr3.1:87263063-87263082 | MS.gene014685:intron | 20.0% |
| !!! | TGAAGAGTTTTAATAGTAAA+GGG | + | chr3.1:87261108-87261127 | MS.gene014685:CDS | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+GGG | + | chr3.1:87264308-87264327 | MS.gene014685:intron | 20.0% |
| !!! | TTATAACTGTCTTTTGAAAA+TGG | + | chr3.1:87261403-87261422 | MS.gene014685:intron | 20.0% |
| !!! | TTCATTGTTTTCATGAATAA+AGG | - | chr3.1:87260711-87260730 | None:intergenic | 20.0% |
| !!! | TTGAAGAGTTTTAATAGTAA+AGG | + | chr3.1:87261107-87261126 | MS.gene014685:CDS | 20.0% |
| !!! | TTGTCTTTTTCTTATAAAGT+AGG | + | chr3.1:87264307-87264326 | MS.gene014685:intron | 20.0% |
| !!! | TTTTTTGTTCAATTTGATGA+AGG | + | chr3.1:87261532-87261551 | MS.gene014685:intron | 20.0% |
| ! | AAAAGGAAGTAGAAATCAAA+AGG | - | chr3.1:87261595-87261614 | None:intergenic | 25.0% |
| ! | AATCATTAACATGTGTCTTA+AGG | - | chr3.1:87263720-87263739 | None:intergenic | 25.0% |
| ! | AATGTATAAATAAAGGGGAA+AGG | + | chr3.1:87263807-87263826 | MS.gene014685:intron | 25.0% |
| ! | ATGTATAAATAAAGGGGAAA+GGG | + | chr3.1:87263808-87263827 | MS.gene014685:intron | 25.0% |
| ! | ATGTGATTTCAATCAAATCA+TGG | + | chr3.1:87263103-87263122 | MS.gene014685:intron | 25.0% |
| ! | CATACAAGTTTGTATAAAAG+TGG | + | chr3.1:87261242-87261261 | MS.gene014685:CDS | 25.0% |
| ! | GAAACCTAAAAAATTGGAAA+TGG | - | chr3.1:87261685-87261704 | None:intergenic | 25.0% |
| ! | GAAAGGGAATATATTGTATT+GGG | + | chr3.1:87263824-87263843 | MS.gene014685:intron | 25.0% |
| ! | GCCAAGAAAAAATAAAGAAA+TGG | - | chr3.1:87263067-87263086 | None:intergenic | 25.0% |
| ! | TATATAATATATGCAGGAAG+AGG | + | chr3.1:87264950-87264969 | MS.gene014685:intron | 25.0% |
| ! | TCCTTAAAAATTTCCACTTT+AGG | + | chr3.1:87264476-87264495 | MS.gene014685:intron | 25.0% |
| ! | TTGATAGAAAGGGAAATATA+GGG | - | chr3.1:87262537-87262556 | None:intergenic | 25.0% |
| ! | TTGTGTCAATTAAATTAGGA+CGG | - | chr3.1:87263761-87263780 | None:intergenic | 25.0% |
| ! | TTTGATAGAAAGGGAAATAT+AGG | - | chr3.1:87262538-87262557 | None:intergenic | 25.0% |
| !! | AAATGTTGGAGTATTTATTG+AGG | - | chr3.1:87264256-87264275 | None:intergenic | 25.0% |
| !! | AATGTTGGAGTATTTATTGA+GGG | - | chr3.1:87264255-87264274 | None:intergenic | 25.0% |
| !! | ACCTAAAGTGGAAATTTTTA+AGG | - | chr3.1:87264480-87264499 | None:intergenic | 25.0% |
| !! | ATCATTTTATTGCACTTTCT+TGG | + | chr3.1:87261964-87261983 | MS.gene014685:intron | 25.0% |
| !! | ATTACAGAAATGTTAACTTG+TGG | - | chr3.1:87263374-87263393 | None:intergenic | 25.0% |
| !! | CAACAAAATGTTTCTATCTT+TGG | + | chr3.1:87263326-87263345 | MS.gene014685:intron | 25.0% |
| !! | CTTTTTCTTATAATAAGGAC+CGG | - | chr3.1:87263872-87263891 | None:intergenic | 25.0% |
| !! | GAGAAGAACATTTTTCTTAA+AGG | - | chr3.1:87264541-87264560 | None:intergenic | 25.0% |
| !! | GTCTTTTTCTTATAAAGTAG+GGG | + | chr3.1:87264309-87264328 | MS.gene014685:intron | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | + | chr3.1:87263981-87264000 | MS.gene014685:intron | 25.0% |
| !!! | AAGCGACACTAATTTTAAAA+CGG | - | chr3.1:87264155-87264174 | None:intergenic | 25.0% |
| !!! | AGGGAATTAATAGTTTTGAA+AGG | + | chr3.1:87264756-87264775 | MS.gene014685:intron | 25.0% |
| !!! | ATGTTGATTCATGTACTAAA+TGG | + | chr3.1:87262015-87262034 | MS.gene014685:intron | 25.0% |
| !!! | GAAGAGTTTTAATAGTAAAG+GGG | + | chr3.1:87261109-87261128 | MS.gene014685:CDS | 25.0% |
| !!! | GCAATTTCCCTATTTTAATT+TGG | + | chr3.1:87264786-87264805 | MS.gene014685:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr3.1:87264082-87264101 | MS.gene014685:intron | 25.0% |
| !!! | GGGAATTAATAGTTTTGAAA+GGG | + | chr3.1:87264757-87264776 | MS.gene014685:intron | 25.0% |
| !!! | TTATGAACTGTTGTTTTGAA+GGG | - | chr3.1:87260989-87261008 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTAGAGTATGTT+CGG | - | chr3.1:87262777-87262796 | None:intergenic | 25.0% |
| !!! | TTTATGAACTGTTGTTTTGA+AGG | - | chr3.1:87260990-87261009 | None:intergenic | 25.0% |
| AAAACACCCAGAAAAATCAT+GGG | - | chr3.1:87262091-87262110 | None:intergenic | 30.0% | |
| AAATGTTAACTTATGCCCTT+AGG | - | chr3.1:87264517-87264536 | None:intergenic | 30.0% | |
| AAATTGTGTGAGAGAAATGT+TGG | - | chr3.1:87264270-87264289 | None:intergenic | 30.0% | |
| AATGTTAACTTATGCCCTTA+GGG | - | chr3.1:87264516-87264535 | None:intergenic | 30.0% | |
| AATTAAAGGTGGACACATTA+AGG | + | chr3.1:87262505-87262524 | MS.gene014685:CDS | 30.0% | |
| AGTTAACTCATGTTGAGTTA+AGG | + | chr3.1:87264736-87264755 | MS.gene014685:intron | 30.0% | |
| ATCAGATGTAATGTGAGATT+TGG | + | chr3.1:87262825-87262844 | MS.gene014685:intron | 30.0% | |
| ATGCTAGGAAAATCAACTTT+CGG | + | chr3.1:87262299-87262318 | MS.gene014685:CDS | 30.0% | |
| ATTCTGTGAATTACCCTTTA+TGG | + | chr3.1:87260938-87260957 | MS.gene014685:CDS | 30.0% | |
| CAACAAATCATCATCAACAA+CGG | + | chr3.1:87260734-87260753 | MS.gene014685:CDS | 30.0% | |
| GCAAAGCAAGAATTAAACAA+GGG | - | chr3.1:87261851-87261870 | None:intergenic | 30.0% | |
| GGAAAGGGAATATATTGTAT+TGG | + | chr3.1:87263823-87263842 | MS.gene014685:intron | 30.0% | |
| GTATTTATTGAGGGTAAAGT+TGG | - | chr3.1:87264246-87264265 | None:intergenic | 30.0% | |
| GTTAACTCATGTTGAGTTAA+GGG | + | chr3.1:87264737-87264756 | MS.gene014685:intron | 30.0% | |
| TAATTTGAATCATGCTTGGT+GGG | + | chr3.1:87263390-87263409 | MS.gene014685:intron | 30.0% | |
| TATTGCTTAAGAGAGTTAGA+AGG | + | chr3.1:87260669-87260688 | MS.gene014685:CDS | 30.0% | |
| TCAGATGTAATGTGAGATTT+GGG | + | chr3.1:87262826-87262845 | MS.gene014685:intron | 30.0% | |
| TCATCTACACCTTCAATATT+AGG | - | chr3.1:87261203-87261222 | None:intergenic | 30.0% | |
| TCTGTAATTTGAATCATGCT+TGG | + | chr3.1:87263386-87263405 | MS.gene014685:intron | 30.0% | |
| TGCAAAGCAAGAATTAAACA+AGG | - | chr3.1:87261852-87261871 | None:intergenic | 30.0% | |
| TTGACACACAGATTAAGAAA+TGG | - | chr3.1:87264374-87264393 | None:intergenic | 30.0% | |
| ! | ACAACAGTTCATAAAGTACT+TGG | + | chr3.1:87260995-87261014 | MS.gene014685:CDS | 30.0% |
| ! | ATTGAAGGTGTAGATGAATT+TGG | + | chr3.1:87261206-87261225 | MS.gene014685:CDS | 30.0% |
| ! | GATCTTTCTAGTATTACACA+TGG | - | chr3.1:87260852-87260871 | None:intergenic | 30.0% |
| ! | GCTGAATTTGATGGTAAAAT+TGG | + | chr3.1:87261074-87261093 | MS.gene014685:CDS | 30.0% |
| ! | GGTAATTCACAGAATTGTTT+TGG | - | chr3.1:87260933-87260952 | None:intergenic | 30.0% |
| ! | TAACTTTCCTCGACATTTTT+CGG | + | chr3.1:87264598-87264617 | MS.gene014685:intron | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr3.1:87264060-87264079 | MS.gene014685:intron | 30.0% |
| ! | TTGATGGTAAAATTGGTTGT+TGG | + | chr3.1:87261081-87261100 | MS.gene014685:CDS | 30.0% |
| !! | AATGTGTCCACCTTTAATTT+TGG | - | chr3.1:87262504-87262523 | None:intergenic | 30.0% |
| !! | GAATTTTGATGGCATCATAT+TGG | + | chr3.1:87263587-87263606 | MS.gene014685:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr3.1:87264061-87264080 | MS.gene014685:intron | 30.0% |
| !!! | GAGATATTTTAACTGAGATC+TGG | + | chr3.1:87262626-87262645 | MS.gene014685:intron | 30.0% |
| AAAAACTCCTGTCTTAGATG+TGG | + | chr3.1:87262469-87262488 | MS.gene014685:CDS | 35.0% | |
| AAAACTCCTGTCTTAGATGT+GGG | + | chr3.1:87262470-87262489 | MS.gene014685:CDS | 35.0% | |
| AAAAGTGGTGAAGAGTTTAG+AGG | + | chr3.1:87261257-87261276 | MS.gene014685:CDS | 35.0% | |
| AAAGTGGTGAAGAGTTTAGA+GGG | + | chr3.1:87261258-87261277 | MS.gene014685:CDS | 35.0% | |
| AAGGTGTAGATGAATTTGGA+GGG | + | chr3.1:87261210-87261229 | MS.gene014685:CDS | 35.0% | |
| AATGTCATCAGCTATTCTCT+TGG | - | chr3.1:87265096-87265115 | None:intergenic | 35.0% | |
| ACAAAAGCAATGTTCCCTAT+TGG | + | chr3.1:87263619-87263638 | MS.gene014685:CDS | 35.0% | |
| ACACTAAATAATACTCCCTC+CGG | - | chr3.1:87264003-87264022 | None:intergenic | 35.0% | |
| ACTAGAAAGATCTAATTGCG+TGG | + | chr3.1:87260860-87260879 | MS.gene014685:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr3.1:87264096-87264115 | MS.gene014685:intron | 35.0% | |
| ATAGTTTCATGGCTTATGCT+TGG | + | chr3.1:87262380-87262399 | MS.gene014685:CDS | 35.0% | |
| ATATCATACCTTGAGCCAAT+AGG | - | chr3.1:87263637-87263656 | None:intergenic | 35.0% | |
| ATGAATTTGGAGGGGTTATA+AGG | + | chr3.1:87261219-87261238 | MS.gene014685:CDS | 35.0% | |
| ATTTCGGAACTTGAAACCTA+TGG | - | chr3.1:87261880-87261899 | None:intergenic | 35.0% | |
| GAAAACACCCAGAAAAATCA+TGG | - | chr3.1:87262092-87262111 | None:intergenic | 35.0% | |
| GATAAAAATAGTACTCCCTC+CGG | + | chr3.1:87263850-87263869 | MS.gene014685:intron | 35.0% | |
| GCACTTGATGTAAAGCATAA+AGG | - | chr3.1:87262977-87262996 | None:intergenic | 35.0% | |
| GTAATTTGAATCATGCTTGG+TGG | + | chr3.1:87263389-87263408 | MS.gene014685:intron | 35.0% | |
| GTCAAACCAAAAAAAGCAGT+GGG | - | chr3.1:87262178-87262197 | None:intergenic | 35.0% | |
| GTCAAGCCTAAGAATGATTA+TGG | + | chr3.1:87262667-87262686 | MS.gene014685:intron | 35.0% | |
| GTGCAAAATGCTGAATTTGA+TGG | + | chr3.1:87261065-87261084 | MS.gene014685:CDS | 35.0% | |
| GTGTTGCCATAATCATTCTT+AGG | - | chr3.1:87262676-87262695 | None:intergenic | 35.0% | |
| TAACTCTTGTTCGACATTCT+TGG | - | chr3.1:87264721-87264740 | None:intergenic | 35.0% | |
| TAGTAAAGGGGATGTAACTA+CGG | + | chr3.1:87261121-87261140 | MS.gene014685:CDS | 35.0% | |
| TATCATACCTTGAGCCAATA+GGG | - | chr3.1:87263636-87263655 | None:intergenic | 35.0% | |
| TCAAACCAAAAAAAGCAGTG+GGG | - | chr3.1:87262177-87262196 | None:intergenic | 35.0% | |
| TGCTAGGAAAATCAACTTTC+GGG | + | chr3.1:87262300-87262319 | MS.gene014685:CDS | 35.0% | |
| TGTCAAACCAAAAAAAGCAG+TGG | - | chr3.1:87262179-87262198 | None:intergenic | 35.0% | |
| TGTCAATTAAATTAGGACGG+AGG | - | chr3.1:87263758-87263777 | None:intergenic | 35.0% | |
| TTACTCAAGTGGTTTCCATT+GGG | + | chr3.1:87262335-87262354 | MS.gene014685:CDS | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr3.1:87263985-87264004 | MS.gene014685:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr3.1:87264004-87263985 | None:intergenic | 35.0% | |
| TTTCGGAACTTGAAACCTAT+GGG | - | chr3.1:87261879-87261898 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr3.1:87263984-87264003 | MS.gene014685:intron | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr3.1:87264003-87263984 | None:intergenic | 35.0% | |
| ! | AGGTAAAAATGGACTCTATG+CGG | + | chr3.1:87265028-87265047 | MS.gene014685:CDS | 35.0% |
| ! | ATGCGGTAGGTTTTACAAAA+AGG | + | chr3.1:87265045-87265064 | MS.gene014685:CDS | 35.0% |
| ! | CCTAAAAATCGATTGGTCAT+TGG | + | chr3.1:87263495-87263514 | MS.gene014685:intron | 35.0% |
| ! | GAAGATTATGCAGAGAGTTT+TGG | + | chr3.1:87261017-87261036 | MS.gene014685:CDS | 35.0% |
| ! | GATATGTTCTCTAAGGAAGA+TGG | + | chr3.1:87264972-87264991 | MS.gene014685:CDS | 35.0% |
| ! | GTAATGTGAGATTTGGGTTA+TGG | + | chr3.1:87262832-87262851 | MS.gene014685:intron | 35.0% |
| ! | GTTTAGAGGGAAGAAAGTTT+TGG | + | chr3.1:87261271-87261290 | MS.gene014685:CDS | 35.0% |
| ! | TGCGGTAGGTTTTACAAAAA+GGG | + | chr3.1:87265046-87265065 | MS.gene014685:CDS | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3.1:87264400-87264419 | MS.gene014685:intron | 35.0% |
| !! | ATCTAAGACAGGAGTTTTTC+CGG | - | chr3.1:87262468-87262487 | None:intergenic | 35.0% |
| !! | ATGCAGAGAGTTTTGGTATT+AGG | + | chr3.1:87261024-87261043 | MS.gene014685:CDS | 35.0% |
| !! | ATTCTTAACTTGTGCCCTTT+GGG | - | chr3.1:87263227-87263246 | None:intergenic | 35.0% |
| !! | CCAATGACCAATCGATTTTT+AGG | - | chr3.1:87263498-87263517 | None:intergenic | 35.0% |
| !! | CGTTTTAACCGTTTTATGCT+TGG | - | chr3.1:87263534-87263553 | None:intergenic | 35.0% |
| !! | TCCACCTTTAATTTTGGCAA+GGG | - | chr3.1:87262498-87262517 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr3.1:87264399-87264418 | None:intergenic | 35.0% |
| !! | TTCTCTTGTTGTTCGAGATT+CGG | + | chr3.1:87261358-87261377 | MS.gene014685:CDS | 35.0% |
| !!! | AAAGTTTTGGTTGTTGGTTG+TGG | + | chr3.1:87261284-87261303 | MS.gene014685:CDS | 35.0% |
| !!! | CGACACTAATTTTAAAACGG+AGG | - | chr3.1:87264152-87264171 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGAAGGGTATGTT+GGG | - | chr3.1:87260980-87260999 | None:intergenic | 35.0% |
| !!! | TAACATTTTTTAAGTGCGCG+TGG | - | chr3.1:87264840-87264859 | None:intergenic | 35.0% |
| !!! | TACGCTGCAACTTTTAAGAT+CGG | + | chr3.1:87264633-87264652 | MS.gene014685:intron | 35.0% |
| !!! | TGTTGTTTTGAAGGGTATGT+TGG | - | chr3.1:87260981-87261000 | None:intergenic | 35.0% |
| AAAAAAAGCAGTGGGGGAAA+AGG | - | chr3.1:87262170-87262189 | None:intergenic | 40.0% | |
| AAACCACTTGAGTAACCACA+TGG | - | chr3.1:87262330-87262349 | None:intergenic | 40.0% | |
| ACATGTTAGGGAACCTAAAG+TGG | - | chr3.1:87264492-87264511 | None:intergenic | 40.0% | |
| ACCCTTGCCAAAATTAAAGG+TGG | + | chr3.1:87262494-87262513 | MS.gene014685:CDS | 40.0% | |
| AGGTACGACCAAGCATAAAA+CGG | + | chr3.1:87263523-87263542 | MS.gene014685:intron | 40.0% | |
| AGGTGTAGATGAATTTGGAG+GGG | + | chr3.1:87261211-87261230 | MS.gene014685:CDS | 40.0% | |
| AGTGGGTGGAAAGGTAAAAA+TGG | + | chr3.1:87265017-87265036 | MS.gene014685:CDS | 40.0% | |
| ATCTGAGGGGAATTCCATAA+AGG | - | chr3.1:87260955-87260974 | None:intergenic | 40.0% | |
| ATGAAGACGTAATCGATCGT+AGG | - | chr3.1:87260907-87260926 | None:intergenic | 40.0% | |
| CAAACCAAAAAAAGCAGTGG+GGG | - | chr3.1:87262176-87262195 | None:intergenic | 40.0% | |
| CTAATTGCGTGGCTTCATTA+TGG | + | chr3.1:87260871-87260890 | MS.gene014685:CDS | 40.0% | |
| CTACGGAATATGTTTGTCGT+TGG | + | chr3.1:87261138-87261157 | MS.gene014685:CDS | 40.0% | |
| CTATGAAGCCATTTCCAAGT+GGG | + | chr3.1:87265000-87265019 | MS.gene014685:CDS | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr3.1:87264097-87264116 | MS.gene014685:intron | 40.0% | |
| GAATCTCGAACAACAAGAGA+AGG | - | chr3.1:87261359-87261378 | None:intergenic | 40.0% | |
| GCTGTTGTGCCTAATATTGA+AGG | + | chr3.1:87261191-87261210 | MS.gene014685:CDS | 40.0% | |
| GGAAGAGGATATGTTCTCTA+AGG | + | chr3.1:87264965-87264984 | MS.gene014685:intron | 40.0% | |
| GGTACCCTTGCCAAAATTAA+AGG | + | chr3.1:87262491-87262510 | MS.gene014685:CDS | 40.0% | |
| GGTTCTTGCTCATAGTTTCA+TGG | + | chr3.1:87262369-87262388 | MS.gene014685:CDS | 40.0% | |
| GTTACTCAAGTGGTTTCCAT+TGG | + | chr3.1:87262334-87262353 | MS.gene014685:CDS | 40.0% | |
| TAGCGCTAGTATTAGTTGGT+TGG | + | chr3.1:87262855-87262874 | MS.gene014685:intron | 40.0% | |
| TATTCTCTTGGCATCCATAG+AGG | - | chr3.1:87265084-87265103 | None:intergenic | 40.0% | |
| TATTGGGAGATAGTGCTTGA+TGG | - | chr3.1:87261747-87261766 | None:intergenic | 40.0% | |
| TCTGAGGGGAATTCCATAAA+GGG | - | chr3.1:87260954-87260973 | None:intergenic | 40.0% | |
| TCTTATAGAGCTAGCTAGCA+TGG | - | chr3.1:87262608-87262627 | None:intergenic | 40.0% | |
| TGGTTGTGGTAATTCTGGTA+TGG | + | chr3.1:87261298-87261317 | MS.gene014685:CDS | 40.0% | |
| TTAGAAGCTGAAGCAAAGCA+TGG | + | chr3.1:87265125-87265144 | MS.gene014685:CDS | 40.0% | |
| TTTACAAAAAGGGGACTGCA+AGG | + | chr3.1:87265056-87265075 | MS.gene014685:CDS | 40.0% | |
| ! | AAAAATGGACTCTATGCGGT+AGG | + | chr3.1:87265032-87265051 | MS.gene014685:CDS | 40.0% |
| ! | ACCACACCCATGATTTTTCT+GGG | + | chr3.1:87262082-87262101 | MS.gene014685:intron | 40.0% |
| ! | ATCATGGACGAAAGCACAAT+TGG | + | chr3.1:87263119-87263138 | MS.gene014685:intron | 40.0% |
| ! | ATGGTAGCGCTAGTATTAGT+TGG | + | chr3.1:87262851-87262870 | MS.gene014685:intron | 40.0% |
| ! | GAAGGTGTAGATGAATTTGG+AGG | + | chr3.1:87261209-87261228 | MS.gene014685:CDS | 40.0% |
| ! | GCGGTAGGTTTTACAAAAAG+GGG | + | chr3.1:87265047-87265066 | MS.gene014685:CDS | 40.0% |
| ! | GGAAGGTCAGAGAATTTTGA+TGG | + | chr3.1:87263576-87263595 | MS.gene014685:CDS | 40.0% |
| ! | GTTGTTGGTTGTGGTAATTC+TGG | + | chr3.1:87261293-87261312 | MS.gene014685:CDS | 40.0% |
| ! | TTTTTACCTTTCCACCCACT+TGG | - | chr3.1:87265017-87265036 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGGCCTCA+AGG | - | chr3.1:87263366-87263385 | None:intergenic | 40.0% |
| !! | AGAGTTTTGGTATTAGGCCA+CGG | + | chr3.1:87261030-87261049 | MS.gene014685:CDS | 40.0% |
| !! | AGTGTTAACTTGTGCCCAAA+GGG | + | chr3.1:87263210-87263229 | MS.gene014685:intron | 40.0% |
| !! | GATTCTTAACTTGTGCCCTT+TGG | - | chr3.1:87263228-87263247 | None:intergenic | 40.0% |
| !! | GGGAACATTGCTTTTGTAAC+CGG | - | chr3.1:87263616-87263635 | None:intergenic | 40.0% |
| !! | GTCCACCTTTAATTTTGGCA+AGG | - | chr3.1:87262499-87262518 | None:intergenic | 40.0% |
| !! | GTTTCTTAACTTGTGCCTTG+AGG | + | chr3.1:87263348-87263367 | MS.gene014685:intron | 40.0% |
| !! | TAGTGTTAACTTGTGCCCAA+AGG | + | chr3.1:87263209-87263228 | MS.gene014685:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3.1:87264404-87264423 | MS.gene014685:intron | 40.0% |
| !!! | GGGAAGAAAGTTTTGGTTGT+TGG | + | chr3.1:87261278-87261297 | MS.gene014685:CDS | 40.0% |
| !!! | TTTTCCCCCACTGCTTTTTT+TGG | + | chr3.1:87262169-87262188 | MS.gene014685:intron | 40.0% |
| AACAGCTTCTGCATTCTCAC+CGG | - | chr3.1:87261177-87261196 | None:intergenic | 45.0% | |
| ACCCAGAAAAATCATGGGTG+TGG | - | chr3.1:87262086-87262105 | None:intergenic | 45.0% | |
| ACGGTTAAAACGTCACACAG+TGG | + | chr3.1:87263542-87263561 | MS.gene014685:CDS | 45.0% | |
| ACTCATGCCGAAAAATGTCG+AGG | - | chr3.1:87264608-87264627 | None:intergenic | 45.0% | |
| AGGGTATGTTGGGAAATCTG+AGG | - | chr3.1:87260970-87260989 | None:intergenic | 45.0% | |
| ATTCTCAAGCATGCGCAACA+TGG | + | chr3.1:87261987-87262006 | MS.gene014685:intron | 45.0% | |
| CAAGAGAAGGAGTAGCATCA+TGG | - | chr3.1:87261346-87261365 | None:intergenic | 45.0% | |
| CACACAGTGGAATTCGTAGA+TGG | + | chr3.1:87263555-87263574 | MS.gene014685:CDS | 45.0% | |
| CAGAAAAATCATGGGTGTGG+TGG | - | chr3.1:87262083-87262102 | None:intergenic | 45.0% | |
| CAGTGGAATTCGTAGATGGA+AGG | + | chr3.1:87263559-87263578 | MS.gene014685:CDS | 45.0% | |
| CCACTTGGAAATGGCTTCAT+AGG | - | chr3.1:87265002-87265021 | None:intergenic | 45.0% | |
| CCTATGAAGCCATTTCCAAG+TGG | + | chr3.1:87264999-87265018 | MS.gene014685:CDS | 45.0% | |
| CTGAGATCTGGTCATGCAAA+TGG | + | chr3.1:87262638-87262657 | MS.gene014685:intron | 45.0% | |
| CTTCAACTCAAGAACCTCTC+CGG | + | chr3.1:87262446-87262465 | MS.gene014685:CDS | 45.0% | |
| GATGGCATCATATTGGCAAC+CGG | + | chr3.1:87263594-87263613 | MS.gene014685:CDS | 45.0% | |
| GGGTATGTTGGGAAATCTGA+GGG | - | chr3.1:87260969-87260988 | None:intergenic | 45.0% | |
| GGTATGTTGGGAAATCTGAG+GGG | - | chr3.1:87260968-87260987 | None:intergenic | 45.0% | |
| TGCACTGTCTCATTAAACCG+TGG | - | chr3.1:87261050-87261069 | None:intergenic | 45.0% | |
| TGTCCATGTGGTTACTCAAG+TGG | + | chr3.1:87262324-87262343 | MS.gene014685:CDS | 45.0% | |
| TTCCATTGGGACTTGTCGAT+CGG | + | chr3.1:87262348-87262367 | MS.gene014685:CDS | 45.0% | |
| TTCCCTAACATGTGCCCTAA+GGG | + | chr3.1:87264499-87264518 | MS.gene014685:intron | 45.0% | |
| TTCTCAAGCATGCGCAACAT+GGG | + | chr3.1:87261988-87262007 | MS.gene014685:intron | 45.0% | |
| ! | CACCACACCCATGATTTTTC+TGG | + | chr3.1:87262081-87262100 | MS.gene014685:intron | 45.0% |
| ! | GATTTTCCTAGCATCTCTCG+TGG | - | chr3.1:87262293-87262312 | None:intergenic | 45.0% |
| ! | TCGATTGGTCATTGGTGTGT+AGG | + | chr3.1:87263503-87263522 | MS.gene014685:intron | 45.0% |
| ! | TGTTTTCCCCACATAGAGCA+TGG | + | chr3.1:87262105-87262124 | MS.gene014685:intron | 45.0% |
| ! | TTGGTGACACTGCTCAACTT+GGG | + | chr3.1:87262399-87262418 | MS.gene014685:CDS | 45.0% |
| !! | CAATGTTCCCTATTGGCTCA+AGG | + | chr3.1:87263626-87263645 | MS.gene014685:CDS | 45.0% |
| !! | GAGAGGTTCTTGAGTTGAAG+GGG | - | chr3.1:87262446-87262465 | None:intergenic | 45.0% |
| !! | GGAGAGGTTCTTGAGTTGAA+GGG | - | chr3.1:87262447-87262466 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3.1:87264403-87264422 | MS.gene014685:intron | 45.0% |
| AACCGATCGACAAGTCCCAA+TGG | - | chr3.1:87262353-87262372 | None:intergenic | 50.0% | |
| ATGCCCTTAGGGCACATGTT+AGG | - | chr3.1:87264505-87264524 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr3.1:87264101-87264120 | MS.gene014685:intron | 50.0% | |
| ATTTACTACTCCCTCCGTCC+CGG | - | chr3.1:87264118-87264137 | None:intergenic | 50.0% | |
| CCATTTCCAAGTGGGTGGAA+AGG | + | chr3.1:87265008-87265027 | MS.gene014685:CDS | 50.0% | |
| CCTTTCCACCCACTTGGAAA+TGG | - | chr3.1:87265011-87265030 | None:intergenic | 50.0% | |
| CTTGCTTTGCATGCACCCAT+AGG | + | chr3.1:87261861-87261880 | MS.gene014685:intron | 50.0% | |
| GCCTAATGTTGTTGCAGGCT+AGG | - | chr3.1:87262131-87262150 | None:intergenic | 50.0% | |
| GCCTAGCCTGCAACAACATT+AGG | + | chr3.1:87262127-87262146 | MS.gene014685:intron | 50.0% | |
| GTTCCCTAACATGTGCCCTA+AGG | + | chr3.1:87264498-87264517 | MS.gene014685:intron | 50.0% | |
| TCGCGTGTTTGTTCAAGGAC+CGG | + | chr3.1:87260764-87260783 | MS.gene014685:CDS | 50.0% | |
| TGAAGCCATTTCCAAGTGGG+TGG | + | chr3.1:87265003-87265022 | MS.gene014685:CDS | 50.0% | |
| TGACACTGCTCAACTTGGGT+TGG | + | chr3.1:87262403-87262422 | MS.gene014685:CDS | 50.0% | |
| TGCCCTTAGGGCACATGTTA+GGG | - | chr3.1:87264504-87264523 | None:intergenic | 50.0% | |
| TGGCTGCCTAATGTTGTTGC+AGG | - | chr3.1:87262136-87262155 | None:intergenic | 50.0% | |
| TTCCTAGCATCTCTCGTGGT+AGG | - | chr3.1:87262289-87262308 | None:intergenic | 50.0% | |
| ! | AGACAGGAGTTTTTCCGGAG+AGG | - | chr3.1:87262463-87262482 | None:intergenic | 50.0% |
| ! | AGGGTACCCACATCTAAGAC+AGG | - | chr3.1:87262479-87262498 | None:intergenic | 50.0% |
| ! | CTTGGTGACACTGCTCAACT+TGG | + | chr3.1:87262398-87262417 | MS.gene014685:CDS | 50.0% |
| ! | GGGAAAAGGTACGAGGACTT+TGG | - | chr3.1:87262156-87262175 | None:intergenic | 50.0% |
| !! | CAACTTTCGGGTTGTCCATG+TGG | + | chr3.1:87262312-87262331 | MS.gene014685:CDS | 50.0% |
| !! | CGGAGAGGTTCTTGAGTTGA+AGG | - | chr3.1:87262448-87262467 | None:intergenic | 50.0% |
| AGGCTAGGCCATGCTCTATG+TGG | - | chr3.1:87262116-87262135 | None:intergenic | 55.0% | |
| AGTTGAAGGGGACCCAAACG+AGG | - | chr3.1:87262434-87262453 | None:intergenic | 55.0% | |
| ATCGTAGGAGCAGGACCTTC+TGG | + | chr3.1:87260789-87260808 | MS.gene014685:CDS | 55.0% | |
| CGTCGTCGCGTGTTTGTTCA+AGG | + | chr3.1:87260759-87260778 | MS.gene014685:CDS | 55.0% | |
| GCAGCTGCTGCTAAACCAGA+AGG | - | chr3.1:87260807-87260826 | None:intergenic | 55.0% | |
| GCTAGGCCATGCTCTATGTG+GGG | - | chr3.1:87262114-87262133 | None:intergenic | 55.0% | |
| GGCTAGGCCATGCTCTATGT+GGG | - | chr3.1:87262115-87262134 | None:intergenic | 55.0% | |
| GGGTTGGATCGTCCTCGTTT+GGG | + | chr3.1:87262419-87262438 | MS.gene014685:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3.1:87264105-87264124 | MS.gene014685:intron | 55.0% | |
| GTCCTACCACGAGAGATGCT+AGG | + | chr3.1:87262284-87262303 | MS.gene014685:CDS | 55.0% | |
| GTTCAAGGACCGGTGATCGT+AGG | + | chr3.1:87260774-87260793 | MS.gene014685:CDS | 55.0% | |
| ! | CGTTGGTTGATCGTTGCGAC+CGG | + | chr3.1:87261155-87261174 | MS.gene014685:CDS | 55.0% |
| ! | TGGGTTGGATCGTCCTCGTT+TGG | + | chr3.1:87262418-87262437 | MS.gene014685:CDS | 55.0% |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3.1:87264104-87264123 | MS.gene014685:intron | 60.0% | |
| GGTCCTGCTCCTACGATCAC+CGG | - | chr3.1:87260786-87260805 | None:intergenic | 60.0% | |
| ! | GCAGTGGGGGAAAAGGTACG+AGG | - | chr3.1:87262163-87262182 | None:intergenic | 60.0% |
| ! | GGGACTGCAAGGTGCCTCTA+TGG | + | chr3.1:87265067-87265086 | MS.gene014685:CDS | 60.0% |
| GGACCGGTGATCGTAGGAGC+AGG | + | chr3.1:87260780-87260799 | MS.gene014685:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 87260663 | 87265154 | 87260663 | ID=MS.gene014685 |
| chr3.1 | mRNA | 87260663 | 87265154 | 87260663 | ID=MS.gene014685.t1;Parent=MS.gene014685 |
| chr3.1 | exon | 87260663 | 87261379 | 87260663 | ID=MS.gene014685.t1.exon1;Parent=MS.gene014685.t1 |
| chr3.1 | CDS | 87260663 | 87261379 | 87260663 | ID=cds.MS.gene014685.t1;Parent=MS.gene014685.t1 |
| chr3.1 | exon | 87262278 | 87262526 | 87262278 | ID=MS.gene014685.t1.exon2;Parent=MS.gene014685.t1 |
| chr3.1 | CDS | 87262278 | 87262526 | 87262278 | ID=cds.MS.gene014685.t1;Parent=MS.gene014685.t1 |
| chr3.1 | exon | 87263525 | 87263647 | 87263525 | ID=MS.gene014685.t1.exon3;Parent=MS.gene014685.t1 |
| chr3.1 | CDS | 87263525 | 87263647 | 87263525 | ID=cds.MS.gene014685.t1;Parent=MS.gene014685.t1 |
| chr3.1 | exon | 87264966 | 87265154 | 87264966 | ID=MS.gene014685.t1.exon4;Parent=MS.gene014685.t1 |
| chr3.1 | CDS | 87264966 | 87265154 | 87264966 | ID=cds.MS.gene014685.t1;Parent=MS.gene014685.t1 |
| Gene Sequence |
| Protein sequence |
