Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56048.t1 | XP_003588544.1 | 98 | 410 | 7 | 1 | 1 | 410 | 22 | 430 | 2.20E-236 | 827.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56048.t1 | Q8VZ59 | 69.5 | 390 | 116 | 2 | 11 | 398 | 21 | 409 | 1.4e-159 | 563.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56048.t1 | G7I4C7 | 98.0 | 410 | 7 | 1 | 1 | 410 | 22 | 430 | 1.6e-236 | 827.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059136 | MS.gene56048 | 0.803569 | 3.28E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene56048 | 0.80219 | 6.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56048 | MS.gene57685 | PPI |
| MS.gene059027 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene015953 | PPI |
| MS.gene049295 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene064951 | PPI |
| MS.gene019484 | MS.gene56048 | PPI |
| MS.gene027681 | MS.gene56048 | PPI |
| MS.gene61665 | MS.gene56048 | PPI |
| MS.gene24021 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene44331 | PPI |
| MS.gene56048 | MS.gene86173 | PPI |
| MS.gene56048 | MS.gene06418 | PPI |
| MS.gene23537 | MS.gene56048 | PPI |
| MS.gene51580 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene53594 | PPI |
| MS.gene56048 | MS.gene038029 | PPI |
| MS.gene56048 | MS.gene09884 | PPI |
| MS.gene94810 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene44332 | PPI |
| MS.gene56048 | MS.gene60245 | PPI |
| MS.gene56048 | MS.gene061851 | PPI |
| MS.gene56048 | MS.gene29205 | PPI |
| MS.gene56048 | MS.gene054944 | PPI |
| MS.gene64265 | MS.gene56048 | PPI |
| MS.gene36879 | MS.gene56048 | PPI |
| MS.gene56048 | MS.gene013322 | PPI |
| MS.gene56048 | MS.gene018590 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56048.t1 | MTR_1g008380 | 98.049 | 410 | 7 | 1 | 1 | 410 | 22 | 430 | 0.0 | 823 |
| MS.gene56048.t1 | MTR_3g109520 | 75.495 | 404 | 98 | 1 | 1 | 403 | 18 | 421 | 0.0 | 635 |
| MS.gene56048.t1 | MTR_6g086870 | 66.093 | 407 | 131 | 4 | 1 | 402 | 1 | 405 | 0.0 | 561 |
| MS.gene56048.t1 | MTR_1g069275 | 63.158 | 399 | 144 | 3 | 13 | 410 | 16 | 412 | 0.0 | 519 |
| MS.gene56048.t1 | MTR_1g046230 | 60.051 | 393 | 153 | 2 | 14 | 403 | 16 | 407 | 9.03e-179 | 504 |
| MS.gene56048.t1 | MTR_1g011630 | 61.658 | 386 | 142 | 3 | 15 | 399 | 9 | 389 | 2.57e-176 | 498 |
| MS.gene56048.t1 | MTR_7g099330 | 58.396 | 399 | 159 | 3 | 13 | 410 | 15 | 407 | 1.04e-174 | 494 |
| MS.gene56048.t1 | MTR_7g099160 | 56.832 | 322 | 132 | 3 | 90 | 410 | 213 | 528 | 9.88e-129 | 382 |
| MS.gene56048.t1 | MTR_7g107690 | 45.040 | 373 | 198 | 3 | 23 | 393 | 9 | 376 | 1.95e-117 | 347 |
| MS.gene56048.t1 | MTR_7g107710 | 47.059 | 374 | 189 | 5 | 23 | 393 | 7 | 374 | 8.40e-115 | 340 |
| MS.gene56048.t1 | MTR_8g432640 | 43.467 | 375 | 205 | 3 | 23 | 395 | 7 | 376 | 2.21e-114 | 339 |
| MS.gene56048.t1 | MTR_5g033260 | 42.971 | 377 | 208 | 3 | 23 | 397 | 7 | 378 | 1.20e-112 | 335 |
| MS.gene56048.t1 | MTR_3g088925 | 42.967 | 391 | 213 | 5 | 23 | 410 | 8 | 391 | 6.88e-108 | 323 |
| MS.gene56048.t1 | MTR_3g088955 | 43.223 | 391 | 212 | 5 | 23 | 410 | 8 | 391 | 3.86e-107 | 322 |
| MS.gene56048.t1 | MTR_3g088945 | 43.316 | 374 | 205 | 3 | 23 | 394 | 8 | 376 | 4.10e-107 | 321 |
| MS.gene56048.t1 | MTR_4g051642 | 41.237 | 388 | 218 | 5 | 23 | 408 | 8 | 387 | 1.36e-102 | 310 |
| MS.gene56048.t1 | MTR_3g096030 | 35.227 | 176 | 89 | 2 | 23 | 197 | 7 | 158 | 1.23e-35 | 129 |
| MS.gene56048.t1 | MTR_3g437580 | 24.251 | 367 | 171 | 12 | 24 | 352 | 15 | 312 | 4.07e-14 | 73.6 |
| MS.gene56048.t1 | MTR_3g437580 | 24.251 | 367 | 171 | 12 | 24 | 352 | 15 | 312 | 1.04e-13 | 72.8 |
| MS.gene56048.t1 | MTR_8g037880 | 24.880 | 209 | 129 | 6 | 24 | 206 | 6 | 212 | 1.98e-13 | 72.0 |
| MS.gene56048.t1 | MTR_2g450310 | 25.403 | 248 | 142 | 11 | 24 | 231 | 7 | 251 | 7.28e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56048.t1 | AT5G25620 | 67.920 | 399 | 125 | 2 | 6 | 402 | 16 | 413 | 0.0 | 562 |
| MS.gene56048.t1 | AT5G25620 | 67.920 | 399 | 125 | 2 | 6 | 402 | 16 | 413 | 0.0 | 562 |
| MS.gene56048.t1 | AT4G13260 | 69.554 | 381 | 115 | 1 | 15 | 394 | 21 | 401 | 0.0 | 553 |
| MS.gene56048.t1 | AT1G04610 | 60.000 | 395 | 153 | 2 | 13 | 403 | 28 | 421 | 7.60e-179 | 505 |
| MS.gene56048.t1 | AT4G28720 | 57.039 | 412 | 172 | 3 | 1 | 408 | 4 | 414 | 2.32e-176 | 499 |
| MS.gene56048.t1 | AT1G04180 | 59.900 | 399 | 157 | 3 | 12 | 409 | 15 | 411 | 3.98e-175 | 495 |
| MS.gene56048.t1 | AT5G43890 | 59.750 | 400 | 155 | 4 | 9 | 403 | 10 | 408 | 1.62e-174 | 494 |
| MS.gene56048.t1 | AT2G33230 | 58.753 | 417 | 156 | 3 | 1 | 403 | 1 | 415 | 1.90e-173 | 491 |
| MS.gene56048.t1 | AT5G11320 | 58.793 | 381 | 151 | 2 | 17 | 397 | 12 | 386 | 1.75e-165 | 471 |
| MS.gene56048.t1 | AT4G32540 | 56.313 | 396 | 167 | 3 | 8 | 402 | 7 | 397 | 1.10e-162 | 464 |
| MS.gene56048.t1 | AT4G32540 | 56.281 | 398 | 166 | 4 | 8 | 402 | 7 | 399 | 4.70e-161 | 459 |
| MS.gene56048.t1 | AT4G13260 | 69.072 | 291 | 89 | 1 | 15 | 304 | 21 | 311 | 5.17e-146 | 417 |
| MS.gene56048.t1 | AT5G11320 | 58.716 | 327 | 130 | 1 | 17 | 343 | 12 | 333 | 9.57e-141 | 405 |
| MS.gene56048.t1 | AT4G13260 | 67.010 | 291 | 95 | 1 | 105 | 394 | 8 | 298 | 7.42e-138 | 397 |
| MS.gene56048.t1 | AT1G21430 | 48.267 | 375 | 184 | 5 | 23 | 394 | 10 | 377 | 5.85e-120 | 354 |
| MS.gene56048.t1 | AT1G48910 | 44.772 | 373 | 199 | 3 | 23 | 393 | 6 | 373 | 2.49e-116 | 345 |
| MS.gene56048.t1 | AT5G61290 | 28.125 | 224 | 114 | 7 | 24 | 207 | 18 | 234 | 7.56e-14 | 73.6 |
| MS.gene56048.t1 | AT5G07800 | 26.818 | 220 | 122 | 7 | 24 | 206 | 18 | 235 | 2.65e-13 | 71.6 |
| MS.gene56048.t1 | AT1G62560 | 22.511 | 231 | 141 | 5 | 24 | 225 | 15 | 236 | 5.80e-13 | 70.5 |
| MS.gene56048.t1 | AT1G62560 | 22.511 | 231 | 141 | 6 | 24 | 225 | 15 | 236 | 6.09e-13 | 70.5 |
| MS.gene56048.t1 | AT5G45180 | 24.148 | 352 | 200 | 14 | 24 | 334 | 15 | 340 | 9.04e-13 | 70.1 |
| MS.gene56048.t1 | AT1G12200 | 24.900 | 249 | 141 | 9 | 38 | 249 | 30 | 269 | 7.17e-12 | 67.0 |
| MS.gene56048.t1 | AT1G65860 | 21.834 | 229 | 144 | 4 | 24 | 225 | 15 | 235 | 9.01e-12 | 67.0 |
| MS.gene56048.t1 | AT1G12200 | 25.523 | 239 | 132 | 9 | 38 | 239 | 30 | 259 | 1.09e-11 | 66.6 |
Find 110 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACAATTCATAGAGTATT+TGG | 0.149405 | 1.3:+11479633 | MS.gene56048:CDS |
| CTTCAAGTGATAGATGTTTA+TGG | 0.160401 | 1.3:+11479389 | MS.gene56048:CDS |
| AGTTTGTGAGCTTCCTTTAA+TGG | 0.176443 | 1.3:+11479576 | MS.gene56048:CDS |
| ATTGAAGGAGTTGATGAATT+TGG | 0.225886 | 1.3:+11479841 | MS.gene56048:CDS |
| ATGAATTTGGTGGTAGTATT+AGG | 0.259873 | 1.3:+11479854 | MS.gene56048:CDS |
| ATGCTGGGAAAATCAACTTT+TGG | 0.272060 | 1.3:+11482005 | MS.gene56048:CDS |
| GGAAGCTCACAAACTTGTTT+TGG | 0.287110 | 1.3:-11479568 | None:intergenic |
| GGTGAGGAGTGAGGGGAAGG+CGG | 0.303591 | 1.3:+11479744 | MS.gene56048:CDS |
| GTGGTTGGATGTGGAAATTC+AGG | 0.305649 | 1.3:+11479928 | MS.gene56048:CDS |
| TCTATGAATTGTTGCTTTGT+TGG | 0.308851 | 1.3:-11479625 | None:intergenic |
| CCACTAGGGAATTCCATTAA+AGG | 0.311291 | 1.3:-11479589 | None:intergenic |
| TTCAGGTATGGAAGTTTGTT+TGG | 0.318132 | 1.3:+11479945 | MS.gene56048:CDS |
| ATAACTTACCTTTAACCAAT+AGG | 0.321026 | 1.3:-11484801 | None:intergenic |
| CGGTTTGGTTCGGCCTCGGT+TGG | 0.332146 | 1.3:+11482124 | MS.gene56048:CDS |
| TAATGTACCCTATTGGTTAA+AGG | 0.336947 | 1.3:+11484793 | MS.gene56048:CDS |
| GTTTAGAGGGAAGAAAGTTT+TGG | 0.342078 | 1.3:+11479906 | MS.gene56048:CDS |
| GTGAGGAGTGAGGGGAAGGC+GGG | 0.346356 | 1.3:+11479745 | MS.gene56048:CDS |
| TTTCACCTTTCCATCCATTA+GGG | 0.348305 | 1.3:-11485541 | None:intergenic |
| AATGGATGGAAAGGTGAAAA+TGG | 0.349533 | 1.3:+11485545 | MS.gene56048:CDS |
| ATAGTAGGAGCAGGACCTTC+AGG | 0.355072 | 1.3:+11479427 | MS.gene56048:CDS |
| GATAGATGTTTATGGATTCC+AGG | 0.359227 | 1.3:+11479397 | MS.gene56048:CDS |
| TAACTTACCTTTAACCAATA+GGG | 0.359812 | 1.3:-11484800 | None:intergenic |
| GCAGCATATCTAAAACAAAA+AGG | 0.363705 | 1.3:+11479460 | MS.gene56048:CDS |
| TGTTGCTTTGTTGGATATGT+TGG | 0.373958 | 1.3:-11479616 | None:intergenic |
| CCATTAGGGAATGGCTTCCT+AGG | 0.378690 | 1.3:-11485527 | None:intergenic |
| GGTTCGGTTTGGTTCGGCCT+CGG | 0.399694 | 1.3:+11482120 | MS.gene56048:CDS |
| ACAAAAGTAATGTACCCTAT+TGG | 0.401012 | 1.3:+11484786 | MS.gene56048:CDS |
| GACGCCATCGTATTGGCAAC+TGG | 0.408426 | 1.3:+11484761 | MS.gene56048:CDS |
| GGATAAGGGTATGTTCTCTA+AGG | 0.417839 | 1.3:+11485493 | MS.gene56048:intron |
| CCTAGGAAGCCATTCCCTAA+TGG | 0.421132 | 1.3:+11485527 | MS.gene56048:CDS |
| TTCACTAAACGTGGACTACT+TGG | 0.424605 | 1.3:+11485584 | MS.gene56048:CDS |
| GAGGGTGAGGAGTGAGGGGA+AGG | 0.436723 | 1.3:+11479741 | MS.gene56048:CDS |
| GAATCTCTAACCACAATAGA+AGG | 0.439167 | 1.3:-11479991 | None:intergenic |
| CAATACAGAACGGTTCGGTT+TGG | 0.439433 | 1.3:+11482109 | MS.gene56048:CDS |
| TTCCCAGCATATCTCTTGGC+AGG | 0.440777 | 1.3:-11481992 | None:intergenic |
| CAAATTGTATAGCTTCACTA+TGG | 0.453940 | 1.3:+11479509 | MS.gene56048:CDS |
| CATCCTGCCAAGAGATATGC+TGG | 0.456200 | 1.3:+11481989 | MS.gene56048:CDS |
| GAGTGAGGGGAAGGCGGGAA+TGG | 0.461670 | 1.3:+11479750 | MS.gene56048:CDS |
| CGGTGGTTGATCGTTGCAAC+CGG | 0.474729 | 1.3:+11479790 | MS.gene56048:CDS |
| ATGGTATATGTGCAGGATAA+GGG | 0.476167 | 1.3:+11485479 | MS.gene56048:intron |
| CAGAACGGTTCGGTTTGGTT+CGG | 0.479807 | 1.3:+11482114 | MS.gene56048:CDS |
| GAATGCTGAGGCGGTTGTAC+CGG | 0.482930 | 1.3:+11479816 | MS.gene56048:CDS |
| GGTCCTGCTCCTACTATCAA+TGG | 0.486209 | 1.3:-11479421 | None:intergenic |
| AAAAGTGGTGAAGAGTTTAG+AGG | 0.487823 | 1.3:+11479892 | MS.gene56048:CDS |
| AAAATTTCGATATTAGGCCT+TGG | 0.488183 | 1.3:+11479668 | MS.gene56048:CDS |
| TGTCCATGTGGTTGCTAAAG+TGG | 0.490674 | 1.3:+11482030 | MS.gene56048:CDS |
| CTGAAGATATTGAACGGTGT+TGG | 0.492435 | 1.3:+11485633 | MS.gene56048:CDS |
| CTTGGCAATACAGAACGGTT+CGG | 0.494535 | 1.3:+11482104 | MS.gene56048:CDS |
| GAAAATGGCCTCTTTGCTGT+TGG | 0.494708 | 1.3:+11485560 | MS.gene56048:CDS |
| TGGTTACCGAGTTTGTTTGT+CGG | 0.495604 | 1.3:+11479770 | MS.gene56048:CDS |
| TGGCAAGGGCACCCACATCT+AGG | 0.496006 | 1.3:-11482187 | None:intergenic |
| AAAGTGGTGAAGAGTTTAGA+GGG | 0.496476 | 1.3:+11479893 | MS.gene56048:CDS |
| AAAGTGGTTACCCGTGCAAC+TGG | 0.496540 | 1.3:+11482046 | MS.gene56048:CDS |
| CCTTTCCATCCATTAGGGAA+TGG | 0.499153 | 1.3:-11485536 | None:intergenic |
| GATCTTTCTAGTATTAAACT+TGG | 0.510703 | 1.3:-11479487 | None:intergenic |
| GGTTTGGTTCGGCCTCGGTT+GGG | 0.511085 | 1.3:+11482125 | MS.gene56048:CDS |
| TCATCAACTCCTTCAATCTC+CGG | 0.512367 | 1.3:-11479835 | None:intergenic |
| GCTGAGTTTGATGCTACACT+TGG | 0.526718 | 1.3:+11479712 | MS.gene56048:CDS |
| TTTGGAGGGTGAGGAGTGAG+GGG | 0.529144 | 1.3:+11479737 | MS.gene56048:CDS |
| GGTATGTTCTCTAAGGAAGA+TGG | 0.529812 | 1.3:+11485500 | MS.gene56048:CDS |
| ATTCCAGGTCCATTGATAGT+AGG | 0.534394 | 1.3:+11479412 | MS.gene56048:CDS |
| AACCGCCTCAGCATTCTCTC+CGG | 0.535999 | 1.3:-11479809 | None:intergenic |
| CATACTAGTTTGTATAAAAG+TGG | 0.538558 | 1.3:+11479877 | MS.gene56048:CDS |
| ATGTAATCCACCAGTTGCAC+GGG | 0.546866 | 1.3:-11482056 | None:intergenic |
| TGATGCTGCTCCTTCTATTG+TGG | 0.549061 | 1.3:+11479981 | MS.gene56048:CDS |
| TGGACTACTTGGTGCATCCA+TGG | 0.549422 | 1.3:+11485595 | MS.gene56048:CDS |
| ACATCCTTCTCACTGTGTCA+TGG | 0.550548 | 1.3:+11482075 | MS.gene56048:CDS |
| TCCCTCGTTCAGGTACGTCC+AGG | 0.553289 | 1.3:+11484680 | MS.gene56048:intron |
| GGATATGTTGGAAAACCACT+AGG | 0.555382 | 1.3:-11479604 | None:intergenic |
| GATTAAAAGAGGAGACATCA+AGG | 0.563954 | 1.3:+11482211 | MS.gene56048:CDS |
| CCATTCCCTAATGGATGGAA+AGG | 0.565023 | 1.3:+11485536 | MS.gene56048:CDS |
| GCCCTTGCCAAGATTAAAAG+AGG | 0.565947 | 1.3:+11482200 | MS.gene56048:CDS |
| CCTTTAATGGAATTCCCTAG+TGG | 0.567347 | 1.3:+11479589 | MS.gene56048:CDS |
| GCGGTTGTACCGGAGATTGA+AGG | 0.568267 | 1.3:+11479826 | MS.gene56048:CDS |
| CAGGCATCAAGAGGTTAAAA+CGG | 0.572356 | 1.3:+11484699 | MS.gene56048:CDS |
| GGAAGCCATTCCCTAATGGA+TGG | 0.574345 | 1.3:+11485531 | MS.gene56048:CDS |
| GCTGTTGGTTTCACTAAACG+TGG | 0.576427 | 1.3:+11485575 | MS.gene56048:CDS |
| GAAGGAGTTGATGAATTTGG+TGG | 0.576519 | 1.3:+11479844 | MS.gene56048:CDS |
| AAAGACACCGGTCCTAGATG+TGG | 0.578940 | 1.3:+11482175 | MS.gene56048:CDS |
| GGTCCATTGATAGTAGGAGC+AGG | 0.584095 | 1.3:+11479418 | MS.gene56048:CDS |
| GATGTAATCCACCAGTTGCA+CGG | 0.587259 | 1.3:-11482057 | None:intergenic |
| GCTGCTACTGCTAGTCCTGA+AGG | 0.587967 | 1.3:-11479442 | None:intergenic |
| GTGGTTACCCGTGCAACTGG+TGG | 0.590830 | 1.3:+11482049 | MS.gene56048:CDS |
| AGGGCACCCACATCTAGGAC+CGG | 0.591712 | 1.3:-11482182 | None:intergenic |
| TACAGAGTGGAATTTGCTGA+TGG | 0.592027 | 1.3:+11484722 | MS.gene56048:CDS |
| CTAAGGAAGATGGATACCCT+AGG | 0.600641 | 1.3:+11485510 | MS.gene56048:CDS |
| CATTAGGGAATGGCTTCCTA+GGG | 0.603860 | 1.3:-11485526 | None:intergenic |
| TGAACGGTGTTGGAAAGTTG+AGG | 0.604949 | 1.3:+11485643 | MS.gene56048:CDS |
| GCTCCTACTATCAATGGACC+TGG | 0.607612 | 1.3:-11479415 | None:intergenic |
| TGGATGTGGAAATTCAGGTA+TGG | 0.622494 | 1.3:+11479933 | MS.gene56048:CDS |
| ACTGTGTCATGGTTAATGCT+TGG | 0.622906 | 1.3:+11482086 | MS.gene56048:CDS |
| AGGTACGTCCAGGCATCAAG+AGG | 0.629400 | 1.3:+11484690 | MS.gene56048:intron |
| TAATGCTTGGCAATACAGAA+CGG | 0.631117 | 1.3:+11482099 | MS.gene56048:CDS |
| TAGTGAAACCAACAGCAAAG+AGG | 0.634282 | 1.3:-11485568 | None:intergenic |
| AAGACACCGGTCCTAGATGT+GGG | 0.638855 | 1.3:+11482176 | MS.gene56048:CDS |
| ATGAAGACGAAGACGATCGT+AGG | 0.641325 | 1.3:-11479542 | None:intergenic |
| GTAACCAGTTGCCAATACGA+TGG | 0.642598 | 1.3:-11484765 | None:intergenic |
| TTACCGAGTTTGTTTGTCGG+TGG | 0.653194 | 1.3:+11479773 | MS.gene56048:CDS |
| TTAACCATGACACAGTGAGA+AGG | 0.654806 | 1.3:-11482079 | None:intergenic |
| GAGGTTAAAACGGTACAGAG+TGG | 0.654866 | 1.3:+11484709 | MS.gene56048:CDS |
| CAACCACCGACAAACAAACT+CGG | 0.654999 | 1.3:-11479776 | None:intergenic |
| ATATAGCTGAAGATATTGAA+CGG | 0.658373 | 1.3:+11485627 | MS.gene56048:CDS |
| GATATGTTGGAAAACCACTA+GGG | 0.658620 | 1.3:-11479603 | None:intergenic |
| AACCGGAGAGAATGCTGAGG+CGG | 0.661182 | 1.3:+11479807 | MS.gene56048:CDS |
| TAACCACTTTAGCAACCACA+TGG | 0.668567 | 1.3:-11482033 | None:intergenic |
| AAAACTGTCTGGAAAGACAC+CGG | 0.678715 | 1.3:+11482163 | MS.gene56048:CDS |
| AGTTCTAGAGGACCCAACCG+AGG | 0.681521 | 1.3:-11482137 | None:intergenic |
| ATCCTGCCAAGAGATATGCT+GGG | 0.697559 | 1.3:+11481990 | MS.gene56048:CDS |
| ATAACTGTCTCATTGAACCA+AGG | 0.702457 | 1.3:-11479685 | None:intergenic |
| TGCAACCGGAGAGAATGCTG+AGG | 0.712718 | 1.3:+11479804 | MS.gene56048:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAATAAGAAATAAA+AGG | - | chr1.3:11482533-11482552 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr1.3:11481829-11481848 | None:intergenic | 10.0% |
| !! | ACATTATAAAATATTTACAT+TGG | + | chr1.3:11481434-11481453 | MS.gene56048:intron | 10.0% |
| !! | GCAAAAAAAAAAAAATTATA+CGG | + | chr1.3:11485053-11485072 | MS.gene56048:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr1.3:11481830-11481849 | None:intergenic | 10.0% |
| !! | TTATGAAAATAATTAAAATC+CGG | + | chr1.3:11482884-11482903 | MS.gene56048:intron | 10.0% |
| !!! | AGATATTTTTAATAAATTGA+CGG | + | chr1.3:11484380-11484399 | MS.gene56048:intron | 10.0% |
| !!! | TATAAAGTTGTTTTTATTTT+TGG | + | chr1.3:11480233-11480252 | MS.gene56048:intron | 10.0% |
| !! | AAAATTCTAAACAATGAAAA+CGG | + | chr1.3:11484850-11484869 | MS.gene56048:intron | 15.0% |
| !! | AATAATACAAATAACTGAAA+TGG | + | chr1.3:11485460-11485479 | MS.gene56048:intron | 15.0% |
| !! | AATCAAATCATACTTTATTA+AGG | + | chr1.3:11484070-11484089 | MS.gene56048:intron | 15.0% |
| !! | ACAAAAAAAAAAAGAGAAAA+AGG | - | chr1.3:11480848-11480867 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr1.3:11481828-11481847 | None:intergenic | 15.0% |
| !! | TATGAAAATAATTAAAATCC+GGG | + | chr1.3:11482885-11482904 | MS.gene56048:intron | 15.0% |
| !! | TCTAATATAGCATATAAAAT+AGG | + | chr1.3:11480502-11480521 | MS.gene56048:intron | 15.0% |
| !!! | AATGAAAATATGTTTTTACT+TGG | + | chr1.3:11485087-11485106 | MS.gene56048:intron | 15.0% |
| !!! | ATTCAAAAATACTTTTGAAA+TGG | - | chr1.3:11480585-11480604 | None:intergenic | 15.0% |
| !!! | ATTTTTCAATGAAATAATTG+AGG | + | chr1.3:11482856-11482875 | MS.gene56048:intron | 15.0% |
| !!! | GTAACTAATTTTTTTTAAGA+AGG | - | chr1.3:11480407-11480426 | None:intergenic | 15.0% |
| !!! | TGCTATTTTTCATATTATTA+AGG | - | chr1.3:11480989-11481008 | None:intergenic | 15.0% |
| !! | AATTTCCATGTTTCTTAATT+AGG | - | chr1.3:11480375-11480394 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAACAAAGTAAA+AGG | - | chr1.3:11480040-11480059 | None:intergenic | 20.0% |
| !! | ATAGTAGTTAAATCTTTAGT+AGG | + | chr1.3:11484451-11484470 | MS.gene56048:intron | 20.0% |
| !! | ATCAAAAATCTTAAGATCTT+AGG | - | chr1.3:11481508-11481527 | None:intergenic | 20.0% |
| !! | ATTCCAAAAATTTCGATATT+AGG | + | chr1.3:11479662-11479681 | MS.gene56048:CDS | 20.0% |
| !! | CACAATCAAACAATTATTAT+AGG | + | chr1.3:11484319-11484338 | MS.gene56048:intron | 20.0% |
| !! | GAAAAATAGCACTTAAATTA+TGG | + | chr1.3:11480998-11481017 | MS.gene56048:intron | 20.0% |
| !! | GTTGAAAATCTTTATGATAA+AGG | + | chr1.3:11481296-11481315 | MS.gene56048:intron | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | - | chr1.3:11482530-11482549 | None:intergenic | 20.0% |
| !! | TATTTCGAATAAGGAAAATA+CGG | + | chr1.3:11485350-11485369 | MS.gene56048:intron | 20.0% |
| !!! | AAGCTTTTTTATTTCGAATA+AGG | + | chr1.3:11485341-11485360 | MS.gene56048:intron | 20.0% |
| !!! | AGTACTCTTTTTATAGAAAA+AGG | + | chr1.3:11481896-11481915 | MS.gene56048:intron | 20.0% |
| !!! | AGTATGTTTTGAATAAAAAC+AGG | - | chr1.3:11480279-11480298 | None:intergenic | 20.0% |
| !!! | ATATTGAATTTTATGCTACA+AGG | - | chr1.3:11480337-11480356 | None:intergenic | 20.0% |
| !!! | ATCTAACACTTAAAGATTTT+GGG | + | chr1.3:11481142-11481161 | MS.gene56048:intron | 20.0% |
| !!! | ATTTTCAAAATTCAGATAGA+TGG | - | chr1.3:11485416-11485435 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAGAGTGCATAAT+GGG | - | chr1.3:11484830-11484849 | None:intergenic | 20.0% |
| !!! | CATGATATTTCACTTTTTTT+GGG | + | chr1.3:11480639-11480658 | MS.gene56048:intron | 20.0% |
| !!! | GTATGTTTTGAATAAAAACA+GGG | - | chr1.3:11480278-11480297 | None:intergenic | 20.0% |
| !!! | TATCTAACACTTAAAGATTT+TGG | + | chr1.3:11481141-11481160 | MS.gene56048:intron | 20.0% |
| !!! | TATTTTTAAAGAGTGCATAA+TGG | - | chr1.3:11484831-11484850 | None:intergenic | 20.0% |
| !!! | TTCGACATTAGTTTTAAATA+AGG | + | chr1.3:11484277-11484296 | MS.gene56048:intron | 20.0% |
| ! | AAAACAAAACACAACTTTGA+AGG | - | chr1.3:11480481-11480500 | None:intergenic | 25.0% |
| ! | AAAGTGACACTAAAATCTTA+AGG | - | chr1.3:11482272-11482291 | None:intergenic | 25.0% |
| ! | AAATAGCACTTAAATTATGG+CGG | + | chr1.3:11481001-11481020 | MS.gene56048:intron | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | - | chr1.3:11482526-11482545 | None:intergenic | 25.0% |
| ! | AGTTGTATTGAAAAGTGAAA+TGG | - | chr1.3:11481732-11481751 | None:intergenic | 25.0% |
| ! | ATAACTTACCTTTAACCAAT+AGG | - | chr1.3:11484804-11484823 | None:intergenic | 25.0% |
| ! | ATATAGCTGAAGATATTGAA+CGG | + | chr1.3:11485627-11485646 | MS.gene56048:CDS | 25.0% |
| ! | ATCTTTCAAACAAGAAAGAA+AGG | - | chr1.3:11484026-11484045 | None:intergenic | 25.0% |
| ! | ATGTGTTTAACCATTGTAAA+TGG | - | chr1.3:11482383-11482402 | None:intergenic | 25.0% |
| ! | CTCTACTTGTAATAATACAA+GGG | - | chr1.3:11480765-11480784 | None:intergenic | 25.0% |
| ! | GTATTCATAATTTCATGTAG+TGG | + | chr1.3:11480529-11480548 | MS.gene56048:intron | 25.0% |
| ! | GTTGAATGAAAAAAAACCAT+TGG | - | chr1.3:11482496-11482515 | None:intergenic | 25.0% |
| ! | GTTGTATTGAAAAGTGAAAT+GGG | - | chr1.3:11481731-11481750 | None:intergenic | 25.0% |
| ! | TAACTTACCTTTAACCAATA+GGG | - | chr1.3:11484803-11484822 | None:intergenic | 25.0% |
| ! | TAAGAAACATGGAAATTTGT+CGG | + | chr1.3:11480378-11480397 | MS.gene56048:intron | 25.0% |
| ! | TATCTCCTAATTAAGAAACA+TGG | + | chr1.3:11480367-11480386 | MS.gene56048:intron | 25.0% |
| ! | TGAATTTACTTCAATATGTG+TGG | - | chr1.3:11484223-11484242 | None:intergenic | 25.0% |
| ! | TTAACTAAGACCATTTACAA+TGG | + | chr1.3:11482370-11482389 | MS.gene56048:intron | 25.0% |
| !! | AAAGATTTTCCATGATCATT+AGG | + | chr1.3:11484040-11484059 | MS.gene56048:intron | 25.0% |
| !! | CATACTAGTTTGTATAAAAG+TGG | + | chr1.3:11479877-11479896 | MS.gene56048:CDS | 25.0% |
| !! | CGAAAACTTTGAAAAAAGAT+TGG | + | chr1.3:11485248-11485267 | MS.gene56048:intron | 25.0% |
| !! | GATCTTTCTAGTATTAAACT+TGG | - | chr1.3:11479490-11479509 | None:intergenic | 25.0% |
| !! | GTCCAAATAAACTTATTTCT+GGG | - | chr1.3:11482322-11482341 | None:intergenic | 25.0% |
| !! | TCATAAAGATTTTCAACACA+AGG | - | chr1.3:11481293-11481312 | None:intergenic | 25.0% |
| !!! | ATGCTGATTTTCATAATCAT+AGG | - | chr1.3:11480200-11480219 | None:intergenic | 25.0% |
| !!! | CGACATAAAATGTTTTAACA+AGG | + | chr1.3:11484253-11484272 | MS.gene56048:intron | 25.0% |
| !!! | CTTTTTTAACTTTTCCGTTT+CGG | + | chr1.3:11480062-11480081 | MS.gene56048:intron | 25.0% |
| !!! | GCATGATATTTCACTTTTTT+TGG | + | chr1.3:11480638-11480657 | MS.gene56048:intron | 25.0% |
| !!! | GTTTTTTCCTTTCACTTTTT+TGG | + | chr1.3:11480872-11480891 | MS.gene56048:intron | 25.0% |
| !!! | TATTTCCCTATTAGTCTTAA+TGG | + | chr1.3:11484197-11484216 | MS.gene56048:intron | 25.0% |
| !!! | TCCAAATAAACTTATTTCTG+GGG | - | chr1.3:11482321-11482340 | None:intergenic | 25.0% |
| !!! | TGATGATACTTTTTCTCTAT+TGG | + | chr1.3:11481950-11481969 | MS.gene56048:intron | 25.0% |
| AAAAAGGTAAGAGCTTATGT+GGG | - | chr1.3:11480832-11480851 | None:intergenic | 30.0% | |
| AAAATTTCGATATTAGGCCT+TGG | + | chr1.3:11479668-11479687 | MS.gene56048:CDS | 30.0% | |
| AACCAAGTCTCTATTTATAG+AGG | + | chr1.3:11482787-11482806 | MS.gene56048:intron | 30.0% | |
| AAGAAACATGGAAATTTGTC+GGG | + | chr1.3:11480379-11480398 | MS.gene56048:intron | 30.0% | |
| AATAGTAGTATCAGAGCATA+TGG | + | chr1.3:11481244-11481263 | MS.gene56048:intron | 30.0% | |
| ACAAAAGTAATGTACCCTAT+TGG | + | chr1.3:11484786-11484805 | MS.gene56048:CDS | 30.0% | |
| ACCCCAGAAATAAGTTTATT+TGG | + | chr1.3:11482317-11482336 | MS.gene56048:intron | 30.0% | |
| AGTAAATGAGTCAGATATTC+CGG | - | chr1.3:11481682-11481701 | None:intergenic | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | - | chr1.3:11482525-11482544 | None:intergenic | 30.0% | |
| ATCCGTGTGAAAAATCAAAT+TGG | + | chr1.3:11481850-11481869 | MS.gene56048:intron | 30.0% | |
| ATGAAAAAAAACCATTGGAG+AGG | - | chr1.3:11482491-11482510 | None:intergenic | 30.0% | |
| CAAAATTCAGATAGATGGAT+AGG | - | chr1.3:11485411-11485430 | None:intergenic | 30.0% | |
| CAAATTGTATAGCTTCACTA+TGG | + | chr1.3:11479509-11479528 | MS.gene56048:CDS | 30.0% | |
| CGTCCAAATAAACTTATTTC+TGG | - | chr1.3:11482323-11482342 | None:intergenic | 30.0% | |
| CTAGACTTAAAACTTAGTTG+TGG | - | chr1.3:11480943-11480962 | None:intergenic | 30.0% | |
| CTTCAAGTGATAGATGTTTA+TGG | + | chr1.3:11479389-11479408 | MS.gene56048:CDS | 30.0% | |
| GAAAGTGGAATATACTGTAT+TGG | - | chr1.3:11481806-11481825 | None:intergenic | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | - | chr1.3:11482527-11482546 | None:intergenic | 30.0% | |
| GATGAAGATAGTGAAAAACT+TGG | + | chr1.3:11482737-11482756 | MS.gene56048:intron | 30.0% | |
| GCTCTACTTGTAATAATACA+AGG | - | chr1.3:11480766-11480785 | None:intergenic | 30.0% | |
| GTATTATTACAAGTAGAGCA+TGG | + | chr1.3:11480767-11480786 | MS.gene56048:intron | 30.0% | |
| TCCGTGTGAAAAATCAAATT+GGG | + | chr1.3:11481851-11481870 | MS.gene56048:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr1.3:11481821-11481840 | None:intergenic | 30.0% | |
| TTCATTAGACTATGTGCAAT+GGG | - | chr1.3:11483978-11483997 | None:intergenic | 30.0% | |
| TTCCTCTATAAATAGAGACT+TGG | - | chr1.3:11482792-11482811 | None:intergenic | 30.0% | |
| TTTCATTAGACTATGTGCAA+TGG | - | chr1.3:11483979-11483998 | None:intergenic | 30.0% | |
| ! | AGGCCTAATATCGAAATTTT+TGG | - | chr1.3:11479668-11479687 | None:intergenic | 30.0% |
| ! | ATGAATTTGGTGGTAGTATT+AGG | + | chr1.3:11479854-11479873 | MS.gene56048:CDS | 30.0% |
| ! | CTTTTGCAAAGAAACATCAT+GGG | - | chr1.3:11480731-11480750 | None:intergenic | 30.0% |
| ! | GCAACAATTCATAGAGTATT+TGG | + | chr1.3:11479633-11479652 | MS.gene56048:CDS | 30.0% |
| ! | GCAGCATATCTAAAACAAAA+AGG | + | chr1.3:11479460-11479479 | MS.gene56048:CDS | 30.0% |
| ! | TAATGTACCCTATTGGTTAA+AGG | + | chr1.3:11484793-11484812 | MS.gene56048:CDS | 30.0% |
| ! | TAGTCTAAGACCATTTACAA+TGG | + | chr1.3:11483178-11483197 | MS.gene56048:intron | 30.0% |
| ! | TCTTTTGCAAAGAAACATCA+TGG | - | chr1.3:11480732-11480751 | None:intergenic | 30.0% |
| !! | AAAGATTTTGGGTGAAGATA+TGG | + | chr1.3:11481153-11481172 | MS.gene56048:intron | 30.0% |
| !! | ATTGAAGGAGTTGATGAATT+TGG | + | chr1.3:11479841-11479860 | MS.gene56048:CDS | 30.0% |
| !! | TCTATGAATTGTTGCTTTGT+TGG | - | chr1.3:11479628-11479647 | None:intergenic | 30.0% |
| !! | TGTTTTGAATAAAAACAGGG+AGG | - | chr1.3:11480275-11480294 | None:intergenic | 30.0% |
| !! | TTCTCTATTGGTTTGATTGA+AGG | + | chr1.3:11481962-11481981 | MS.gene56048:intron | 30.0% |
| !!! | AGCTATATTTTTTGCATCCA+TGG | - | chr1.3:11485615-11485634 | None:intergenic | 30.0% |
| !!! | CTAAGTTTTAAGTCTAGTCA+TGG | + | chr1.3:11480946-11480965 | MS.gene56048:intron | 30.0% |
| AAAAGTGGTGAAGAGTTTAG+AGG | + | chr1.3:11479892-11479911 | MS.gene56048:CDS | 35.0% | |
| AAACATCATGGGAAGGAAAA+AGG | - | chr1.3:11480720-11480739 | None:intergenic | 35.0% | |
| AAAGTGGTGAAGAGTTTAGA+GGG | + | chr1.3:11479893-11479912 | MS.gene56048:CDS | 35.0% | |
| AACAACAAAAACCAGTCCAA+TGG | - | chr1.3:11483128-11483147 | None:intergenic | 35.0% | |
| AACACAATTAAGGCCTATCA+AGG | + | chr1.3:11480795-11480814 | MS.gene56048:intron | 35.0% | |
| AACTGAAATGGTATATGTGC+AGG | + | chr1.3:11485472-11485491 | MS.gene56048:intron | 35.0% | |
| AAGAAGATTCCTTGACTGTT+GGG | - | chr1.3:11482938-11482957 | None:intergenic | 35.0% | |
| AATGGATGGAAAGGTGAAAA+TGG | + | chr1.3:11485545-11485564 | MS.gene56048:CDS | 35.0% | |
| AATGGTATATGTGCAGGATA+AGG | + | chr1.3:11485478-11485497 | MS.gene56048:intron | 35.0% | |
| ACACAATTAAGGCCTATCAA+GGG | + | chr1.3:11480796-11480815 | MS.gene56048:intron | 35.0% | |
| AGTTTGTGAGCTTCCTTTAA+TGG | + | chr1.3:11479576-11479595 | MS.gene56048:CDS | 35.0% | |
| ATAACTGTCTCATTGAACCA+AGG | - | chr1.3:11479688-11479707 | None:intergenic | 35.0% | |
| ATCCTATGTCCTCATTGTTA+CGG | - | chr1.3:11484345-11484364 | None:intergenic | 35.0% | |
| ATGGTATATGTGCAGGATAA+GGG | + | chr1.3:11485479-11485498 | MS.gene56048:intron | 35.0% | |
| ATTGTGCAAATTCATGTGTG+TGG | + | chr1.3:11481534-11481553 | MS.gene56048:intron | 35.0% | |
| CCAAACACCAAAAAAGTGAA+AGG | - | chr1.3:11480882-11480901 | None:intergenic | 35.0% | |
| CTAGAACTCAAAAAACTGTC+TGG | + | chr1.3:11482152-11482171 | MS.gene56048:CDS | 35.0% | |
| GAAAAAGGTAAGAGCTTATG+TGG | - | chr1.3:11480833-11480852 | None:intergenic | 35.0% | |
| GAATCTCTAACCACAATAGA+AGG | - | chr1.3:11479994-11480013 | None:intergenic | 35.0% | |
| GAATGAAGCTGTTATGTGAT+GGG | + | chr1.3:11480901-11480920 | MS.gene56048:intron | 35.0% | |
| GATAGATGTTTATGGATTCC+AGG | + | chr1.3:11479397-11479416 | MS.gene56048:CDS | 35.0% | |
| GATATGTTGGAAAACCACTA+GGG | - | chr1.3:11479606-11479625 | None:intergenic | 35.0% | |
| GATTAAAAGAGGAGACATCA+AGG | + | chr1.3:11482211-11482230 | MS.gene56048:CDS | 35.0% | |
| GGTATACACTTGAGTTCAAT+CGG | + | chr1.3:11484934-11484953 | MS.gene56048:intron | 35.0% | |
| GTAAATGAGTCAGATATTCC+GGG | - | chr1.3:11481681-11481700 | None:intergenic | 35.0% | |
| GTGTTGGGAATTGAAAAAGT+GGG | - | chr1.3:11482422-11482441 | None:intergenic | 35.0% | |
| TAATGCTTGGCAATACAGAA+CGG | + | chr1.3:11482099-11482118 | MS.gene56048:CDS | 35.0% | |
| TAATTTCATGTAGTGGCTAC+AGG | + | chr1.3:11480536-11480555 | MS.gene56048:intron | 35.0% | |
| TACTACTATTGAGTCATGAG+AGG | - | chr1.3:11481234-11481253 | None:intergenic | 35.0% | |
| TAGTATCAGAGCATATGGTT+TGG | + | chr1.3:11481249-11481268 | MS.gene56048:intron | 35.0% | |
| TATTATAGGCCGTAACAATG+AGG | + | chr1.3:11484333-11484352 | MS.gene56048:intron | 35.0% | |
| TCATGATGCGATTGTGATTA+AGG | - | chr1.3:11481033-11481052 | None:intergenic | 35.0% | |
| TGTGGCCATTAAGACTAATA+GGG | - | chr1.3:11484205-11484224 | None:intergenic | 35.0% | |
| TTAAGAGAGAGAAGATGATG+TGG | - | chr1.3:11482446-11482465 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | + | chr1.3:11482477-11482496 | MS.gene56048:intron | 35.0% | |
| TTGATAGGCCTTAATTGTGT+TGG | - | chr1.3:11480796-11480815 | None:intergenic | 35.0% | |
| TTTAAGTCTAGTCATGGTTG+AGG | + | chr1.3:11480952-11480971 | MS.gene56048:intron | 35.0% | |
| TTTCACCTTTCCATCCATTA+GGG | - | chr1.3:11485544-11485563 | None:intergenic | 35.0% | |
| ! | AGATTTTCAACACAAGGAGA+AGG | - | chr1.3:11481287-11481306 | None:intergenic | 35.0% |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | - | chr1.3:11482423-11482442 | None:intergenic | 35.0% |
| ! | ATGCTGGGAAAATCAACTTT+TGG | + | chr1.3:11482005-11482024 | MS.gene56048:CDS | 35.0% |
| ! | ATGTTACTACAACTGACTCA+AGG | - | chr1.3:11481610-11481629 | None:intergenic | 35.0% |
| ! | GAGACTTGGTTCATTTGATT+TGG | - | chr1.3:11482778-11482797 | None:intergenic | 35.0% |
| ! | GATGTCTCCTCTTTTAATCT+TGG | - | chr1.3:11482210-11482229 | None:intergenic | 35.0% |
| ! | GATTTTCAACACAAGGAGAA+GGG | - | chr1.3:11481286-11481305 | None:intergenic | 35.0% |
| ! | GTTTAGAGGGAAGAAAGTTT+TGG | + | chr1.3:11479906-11479925 | MS.gene56048:CDS | 35.0% |
| ! | TAACTTTTCCGTTTCGGAAA+TGG | + | chr1.3:11480068-11480087 | MS.gene56048:intron | 35.0% |
| ! | TCCTCTTTTAATCTTGGCAA+GGG | - | chr1.3:11482204-11482223 | None:intergenic | 35.0% |
| ! | TGCTGGGAAAATCAACTTTT+GGG | + | chr1.3:11482006-11482025 | MS.gene56048:CDS | 35.0% |
| ! | TTCAGGTATGGAAGTTTGTT+TGG | + | chr1.3:11479945-11479964 | MS.gene56048:CDS | 35.0% |
| ! | TTTTCACCTTTCCATCCATT+AGG | - | chr1.3:11485545-11485564 | None:intergenic | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | - | chr1.3:11482413-11482432 | None:intergenic | 35.0% |
| !! | GCCCAATTTGATTTTTCACA+CGG | - | chr1.3:11481855-11481874 | None:intergenic | 35.0% |
| !! | TGTTGCTTTGTTGGATATGT+TGG | - | chr1.3:11479619-11479638 | None:intergenic | 35.0% |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | - | chr1.3:11482412-11482431 | None:intergenic | 35.0% |
| !! | TTGAAAGCACCTAATGATCA+TGG | - | chr1.3:11484052-11484071 | None:intergenic | 35.0% |
| !! | TTGATGCTACACTTGGTTTT+TGG | + | chr1.3:11479719-11479738 | MS.gene56048:CDS | 35.0% |
| !! | TTGGAATTTGATTGGTTTCC+CGG | - | chr1.3:11482906-11482925 | None:intergenic | 35.0% |
| !!! | CCTTTCACTTTTTTGGTGTT+TGG | + | chr1.3:11480879-11480898 | MS.gene56048:intron | 35.0% |
| !!! | GACAGTTTTTTGAGTTCTAG+AGG | - | chr1.3:11482152-11482171 | None:intergenic | 35.0% |
| AAAACTGTCTGGAAAGACAC+CGG | + | chr1.3:11482163-11482182 | MS.gene56048:CDS | 40.0% | |
| ACTGTGTCATGGTTAATGCT+TGG | + | chr1.3:11482086-11482105 | MS.gene56048:CDS | 40.0% | |
| AGAAGATTCCTTGACTGTTG+GGG | - | chr1.3:11482937-11482956 | None:intergenic | 40.0% | |
| ATAGGCCTTAATTGTGTTGG+TGG | - | chr1.3:11480793-11480812 | None:intergenic | 40.0% | |
| ATCATGGGAAGGAAAAAGGA+GGG | - | chr1.3:11480716-11480735 | None:intergenic | 40.0% | |
| CAAATTGGGCCAGATATTCT+GGG | + | chr1.3:11481865-11481884 | MS.gene56048:intron | 40.0% | |
| CAACACAATTGAATCTGCAC+CGG | - | chr1.3:11483051-11483070 | None:intergenic | 40.0% | |
| CAGGCATCAAGAGGTTAAAA+CGG | + | chr1.3:11484699-11484718 | MS.gene56048:CDS | 40.0% | |
| CCACTAGGGAATTCCATTAA+AGG | - | chr1.3:11479592-11479611 | None:intergenic | 40.0% | |
| CCTTTAATGGAATTCCCTAG+TGG | + | chr1.3:11479589-11479608 | MS.gene56048:CDS | 40.0% | |
| CTGAAGATATTGAACGGTGT+TGG | + | chr1.3:11485633-11485652 | MS.gene56048:CDS | 40.0% | |
| GAAGAAGATTCCTTGACTGT+TGG | - | chr1.3:11482939-11482958 | None:intergenic | 40.0% | |
| GCACTAACGACATGTGAAAA+AGG | + | chr1.3:11484913-11484932 | MS.gene56048:intron | 40.0% | |
| GGAATGAAGCTGTTATGTGA+TGG | + | chr1.3:11480900-11480919 | MS.gene56048:intron | 40.0% | |
| GGATATGTTGGAAAACCACT+AGG | - | chr1.3:11479607-11479626 | None:intergenic | 40.0% | |
| GGTCTTAGACTATGTGCAAT+GGG | - | chr1.3:11483170-11483189 | None:intergenic | 40.0% | |
| GTGTGGCCATTAAGACTAAT+AGG | - | chr1.3:11484206-11484225 | None:intergenic | 40.0% | |
| GTTGCGAGAATCGTTAGATT+TGG | + | chr1.3:11480111-11480130 | MS.gene56048:intron | 40.0% | |
| TAACCACTTTAGCAACCACA+TGG | - | chr1.3:11482036-11482055 | None:intergenic | 40.0% | |
| TAGTGAAACCAACAGCAAAG+AGG | - | chr1.3:11485571-11485590 | None:intergenic | 40.0% | |
| TCAAATTGGGCCAGATATTC+TGG | + | chr1.3:11481864-11481883 | MS.gene56048:intron | 40.0% | |
| TCATCAACTCCTTCAATCTC+CGG | - | chr1.3:11479838-11479857 | None:intergenic | 40.0% | |
| TGCAAAGAAACATCATGGGA+AGG | - | chr1.3:11480727-11480746 | None:intergenic | 40.0% | |
| TGGATAGGCTCATAGAAGAT+AGG | - | chr1.3:11485396-11485415 | None:intergenic | 40.0% | |
| TGGATGTGGAAATTCAGGTA+TGG | + | chr1.3:11479933-11479952 | MS.gene56048:CDS | 40.0% | |
| TGTTGACATTGTGTCAACAG+TGG | + | chr1.3:11481336-11481355 | MS.gene56048:intron | 40.0% | |
| TTAACCATGACACAGTGAGA+AGG | - | chr1.3:11482082-11482101 | None:intergenic | 40.0% | |
| ! | AGAAGATGATGTGGAGTGTT+GGG | - | chr1.3:11482437-11482456 | None:intergenic | 40.0% |
| ! | AGAGCATATGGTTTGGCTAA+AGG | + | chr1.3:11481256-11481275 | MS.gene56048:intron | 40.0% |
| ! | ATTCCAGGTCCATTGATAGT+AGG | + | chr1.3:11479412-11479431 | MS.gene56048:CDS | 40.0% |
| ! | CTCCTCTTTTAATCTTGGCA+AGG | - | chr1.3:11482205-11482224 | None:intergenic | 40.0% |
| ! | CTGCTTCATTGGCTAAAACA+TGG | - | chr1.3:11483015-11483034 | None:intergenic | 40.0% |
| ! | GATTTTCCCAGCATATCTCT+TGG | - | chr1.3:11481999-11482018 | None:intergenic | 40.0% |
| ! | GGATAAGGGTATGTTCTCTA+AGG | + | chr1.3:11485493-11485512 | MS.gene56048:intron | 40.0% |
| ! | GGTATGTTCTCTAAGGAAGA+TGG | + | chr1.3:11485500-11485519 | MS.gene56048:CDS | 40.0% |
| ! | TGGTCTTAGACTATGTGCAA+TGG | - | chr1.3:11483171-11483190 | None:intergenic | 40.0% |
| ! | TGGTTACCGAGTTTGTTTGT+CGG | + | chr1.3:11479770-11479789 | MS.gene56048:CDS | 40.0% |
| ! | TTCACTAAACGTGGACTACT+TGG | + | chr1.3:11485584-11485603 | MS.gene56048:CDS | 40.0% |
| !! | AAAGTTTTGGTGGTTGGATG+TGG | + | chr1.3:11479919-11479938 | MS.gene56048:CDS | 40.0% |
| !! | ATGCTACACTTGGTTTTTGG+AGG | + | chr1.3:11479722-11479741 | MS.gene56048:CDS | 40.0% |
| !! | GAAGGAGTTGATGAATTTGG+TGG | + | chr1.3:11479844-11479863 | MS.gene56048:CDS | 40.0% |
| !! | GAATTTTGACGCCATCGTAT+TGG | + | chr1.3:11484754-11484773 | MS.gene56048:CDS | 40.0% |
| !! | GGAAGCTCACAAACTTGTTT+TGG | - | chr1.3:11479571-11479590 | None:intergenic | 40.0% |
| !! | TACAGAGTGGAATTTGCTGA+TGG | + | chr1.3:11484722-11484741 | MS.gene56048:CDS | 40.0% |
| !! | TAGAGGGAAGAAAGTTTTGG+TGG | + | chr1.3:11479909-11479928 | MS.gene56048:CDS | 40.0% |
| !! | TGCTACACTTGGTTTTTGGA+GGG | + | chr1.3:11479723-11479742 | MS.gene56048:CDS | 40.0% |
| AAGGAGGGGAAAAAAGCAAC+TGG | - | chr1.3:11480701-11480720 | None:intergenic | 45.0% | |
| AAGGTAAGAGCTTATGTGGG+AGG | - | chr1.3:11480829-11480848 | None:intergenic | 45.0% | |
| ACACACCTTCAACACTCCAT+TGG | + | chr1.3:11483109-11483128 | MS.gene56048:intron | 45.0% | |
| ACATCCTTCTCACTGTGTCA+TGG | + | chr1.3:11482075-11482094 | MS.gene56048:CDS | 45.0% | |
| ACTTAGTTGTGGAGATGCTG+TGG | - | chr1.3:11480932-11480951 | None:intergenic | 45.0% | |
| AGGAGGGGAAAAAAGCAACT+GGG | - | chr1.3:11480700-11480719 | None:intergenic | 45.0% | |
| ATCCTGCCAAGAGATATGCT+GGG | + | chr1.3:11481990-11482009 | MS.gene56048:CDS | 45.0% | |
| ATGAAGACGAAGACGATCGT+AGG | - | chr1.3:11479545-11479564 | None:intergenic | 45.0% | |
| ATGAGTCAGATATTCCGGGA+CGG | - | chr1.3:11481677-11481696 | None:intergenic | 45.0% | |
| ATGTAATCCACCAGTTGCAC+GGG | - | chr1.3:11482059-11482078 | None:intergenic | 45.0% | |
| ATTCTCAAGCATGCCTAGCA+TGG | + | chr1.3:11480662-11480681 | MS.gene56048:intron | 45.0% | |
| CAACCACCGACAAACAAACT+CGG | - | chr1.3:11479779-11479798 | None:intergenic | 45.0% | |
| CATCATGGGAAGGAAAAAGG+AGG | - | chr1.3:11480717-11480736 | None:intergenic | 45.0% | |
| CATGGCCACCAACACAATTA+AGG | + | chr1.3:11480785-11480804 | MS.gene56048:intron | 45.0% | |
| CATTAGGGAATGGCTTCCTA+GGG | - | chr1.3:11485529-11485548 | None:intergenic | 45.0% | |
| CCTTTCCATCCATTAGGGAA+TGG | - | chr1.3:11485539-11485558 | None:intergenic | 45.0% | |
| CTAAGGAAGATGGATACCCT+AGG | + | chr1.3:11485510-11485529 | MS.gene56048:CDS | 45.0% | |
| CTTGGCAATACAGAACGGTT+CGG | + | chr1.3:11482104-11482123 | MS.gene56048:CDS | 45.0% | |
| GAAGATTCCTTGACTGTTGG+GGG | - | chr1.3:11482936-11482955 | None:intergenic | 45.0% | |
| GACGCGTGTTGGAATTTGAT+TGG | - | chr1.3:11482914-11482933 | None:intergenic | 45.0% | |
| GAGAAGATGATGTGGAGTGT+TGG | - | chr1.3:11482438-11482457 | None:intergenic | 45.0% | |
| GAGGTTAAAACGGTACAGAG+TGG | + | chr1.3:11484709-11484728 | MS.gene56048:CDS | 45.0% | |
| GATGTAATCCACCAGTTGCA+CGG | - | chr1.3:11482060-11482079 | None:intergenic | 45.0% | |
| GCCCTTGCCAAGATTAAAAG+AGG | + | chr1.3:11482200-11482219 | MS.gene56048:CDS | 45.0% | |
| GCTGAGTTTGATGCTACACT+TGG | + | chr1.3:11479712-11479731 | MS.gene56048:CDS | 45.0% | |
| GTAACCAGTTGCCAATACGA+TGG | - | chr1.3:11484768-11484787 | None:intergenic | 45.0% | |
| GTCATCTTCTATCCCATGCT+AGG | - | chr1.3:11480678-11480697 | None:intergenic | 45.0% | |
| GTGGTTGGATGTGGAAATTC+AGG | + | chr1.3:11479928-11479947 | MS.gene56048:CDS | 45.0% | |
| TCATGGGAAGGAAAAAGGAG+GGG | - | chr1.3:11480715-11480734 | None:intergenic | 45.0% | |
| TGATGCTGCTCCTTCTATTG+TGG | + | chr1.3:11479981-11480000 | MS.gene56048:CDS | 45.0% | |
| TGTCCATGTGGTTGCTAAAG+TGG | + | chr1.3:11482030-11482049 | MS.gene56048:CDS | 45.0% | |
| TTCTCAAGCATGCCTAGCAT+GGG | + | chr1.3:11480663-11480682 | MS.gene56048:intron | 45.0% | |
| ! | ACGGAGGGAGTATATAGTAG+AGG | - | chr1.3:11481658-11481677 | None:intergenic | 45.0% |
| ! | CCATTCCCTAATGGATGGAA+AGG | + | chr1.3:11485536-11485555 | MS.gene56048:CDS | 45.0% |
| ! | GAAAATGGCCTCTTTGCTGT+TGG | + | chr1.3:11485560-11485579 | MS.gene56048:CDS | 45.0% |
| ! | GAGGGAGTATATAGTAGAGG+AGG | - | chr1.3:11481655-11481674 | None:intergenic | 45.0% |
| ! | GCATATGGTTTGGCTAAAGG+TGG | + | chr1.3:11481259-11481278 | MS.gene56048:intron | 45.0% |
| ! | TGAACGGTGTTGGAAAGTTG+AGG | + | chr1.3:11485643-11485662 | MS.gene56048:CDS | 45.0% |
| ! | TTACCGAGTTTGTTTGTCGG+TGG | + | chr1.3:11479773-11479792 | MS.gene56048:CDS | 45.0% |
| !! | CAATACAGAACGGTTCGGTT+TGG | + | chr1.3:11482109-11482128 | MS.gene56048:CDS | 45.0% |
| !! | CATCGGTTCCATTTCCGAAA+CGG | - | chr1.3:11480079-11480098 | None:intergenic | 45.0% |
| !! | CGTTTTAACCTCTTGATGCC+TGG | - | chr1.3:11484701-11484720 | None:intergenic | 45.0% |
| !! | GAGTGTTGAAGGTGTGTTGA+AGG | - | chr1.3:11483106-11483125 | None:intergenic | 45.0% |
| !! | GCTGTTGGTTTCACTAAACG+TGG | + | chr1.3:11485575-11485594 | MS.gene56048:CDS | 45.0% |
| !! | GGGAAGAAAGTTTTGGTGGT+TGG | + | chr1.3:11479913-11479932 | MS.gene56048:CDS | 45.0% |
| !!! | CAACTTTTGGGTTGTCCATG+TGG | + | chr1.3:11482018-11482037 | MS.gene56048:CDS | 45.0% |
| AAAGACACCGGTCCTAGATG+TGG | + | chr1.3:11482175-11482194 | MS.gene56048:CDS | 50.0% | |
| AAAGTGGTTACCCGTGCAAC+TGG | + | chr1.3:11482046-11482065 | MS.gene56048:CDS | 50.0% | |
| AAGACACCGGTCCTAGATGT+GGG | + | chr1.3:11482176-11482195 | MS.gene56048:CDS | 50.0% | |
| ACTATATACTCCCTCCGTCC+CGG | + | chr1.3:11481660-11481679 | MS.gene56048:intron | 50.0% | |
| AGGTGTGTTGAAGGATCTGC+TGG | - | chr1.3:11483097-11483116 | None:intergenic | 50.0% | |
| ATAGTAGGAGCAGGACCTTC+AGG | + | chr1.3:11479427-11479446 | MS.gene56048:CDS | 50.0% | |
| ATGGAACCGATGCACAATGC+AGG | + | chr1.3:11480087-11480106 | MS.gene56048:intron | 50.0% | |
| CATCCTGCCAAGAGATATGC+TGG | + | chr1.3:11481989-11482008 | MS.gene56048:CDS | 50.0% | |
| CCATTAGGGAATGGCTTCCT+AGG | - | chr1.3:11485530-11485549 | None:intergenic | 50.0% | |
| CCTAGGAAGCCATTCCCTAA+TGG | + | chr1.3:11485527-11485546 | MS.gene56048:CDS | 50.0% | |
| CCTTCAACACTCCATTGGAC+TGG | + | chr1.3:11483114-11483133 | MS.gene56048:intron | 50.0% | |
| CGCATCATGATCGTCGTTGT+TGG | + | chr1.3:11481043-11481062 | MS.gene56048:intron | 50.0% | |
| GCAACTCCTGCATTGTGCAT+CGG | - | chr1.3:11480096-11480115 | None:intergenic | 50.0% | |
| GCTCCTACTATCAATGGACC+TGG | - | chr1.3:11479418-11479437 | None:intergenic | 50.0% | |
| GGAAGCCATTCCCTAATGGA+TGG | + | chr1.3:11485531-11485550 | MS.gene56048:CDS | 50.0% | |
| GGCCGTAACAATGAGGACAT+AGG | + | chr1.3:11484340-11484359 | MS.gene56048:intron | 50.0% | |
| GGTCCTGCTCCTACTATCAA+TGG | - | chr1.3:11479424-11479443 | None:intergenic | 50.0% | |
| TTCCCAGCATATCTCTTGGC+AGG | - | chr1.3:11481995-11482014 | None:intergenic | 50.0% | |
| ! | AACAGTGGTGCTAACGACGT+AGG | + | chr1.3:11481351-11481370 | MS.gene56048:intron | 50.0% |
| ! | GAGCTTATGTGGGAGGCTTT+TGG | - | chr1.3:11480822-11480841 | None:intergenic | 50.0% |
| ! | GGTCCATTGATAGTAGGAGC+AGG | + | chr1.3:11479418-11479437 | MS.gene56048:CDS | 50.0% |
| ! | TTGGGCCAGATATTCTGGGA+CGG | + | chr1.3:11481869-11481888 | MS.gene56048:intron | 50.0% |
| !! | CACTTGGTTTTTGGAGGGTG+AGG | + | chr1.3:11479728-11479747 | MS.gene56048:CDS | 50.0% |
| !! | CAGAACGGTTCGGTTTGGTT+CGG | + | chr1.3:11482114-11482133 | MS.gene56048:CDS | 50.0% |
| !! | CCAGTCCAATGGAGTGTTGA+AGG | - | chr1.3:11483117-11483136 | None:intergenic | 50.0% |
| !! | TGGACTACTTGGTGCATCCA+TGG | + | chr1.3:11485595-11485614 | MS.gene56048:CDS | 50.0% |
| !! | TTTTGGAGGGTGAGGAGTGA+GGG | + | chr1.3:11479736-11479755 | MS.gene56048:CDS | 50.0% |
| !! | TTTTTGGAGGGTGAGGAGTG+AGG | + | chr1.3:11479735-11479754 | MS.gene56048:CDS | 50.0% |
| AACCGCCTCAGCATTCTCTC+CGG | - | chr1.3:11479812-11479831 | None:intergenic | 55.0% | |
| AACCGGAGAGAATGCTGAGG+CGG | + | chr1.3:11479807-11479826 | MS.gene56048:CDS | 55.0% | |
| AGGTACGTCCAGGCATCAAG+AGG | + | chr1.3:11484690-11484709 | MS.gene56048:intron | 55.0% | |
| AGTCAGATATTCCGGGACGG+AGG | - | chr1.3:11481674-11481693 | None:intergenic | 55.0% | |
| CGGTGGTTGATCGTTGCAAC+CGG | + | chr1.3:11479790-11479809 | MS.gene56048:CDS | 55.0% | |
| GAATGCTGAGGCGGTTGTAC+CGG | + | chr1.3:11479816-11479835 | MS.gene56048:CDS | 55.0% | |
| GCGGTTGTACCGGAGATTGA+AGG | + | chr1.3:11479826-11479845 | MS.gene56048:CDS | 55.0% | |
| GCTGCTACTGCTAGTCCTGA+AGG | - | chr1.3:11479445-11479464 | None:intergenic | 55.0% | |
| GTACCTGAACGAGGGAGCTA+TGG | - | chr1.3:11484676-11484695 | None:intergenic | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr1.3:11481673-11481692 | None:intergenic | 55.0% | |
| TCCCTCCGTCCCAGAATATC+TGG | - | chr1.3:11481877-11481896 | None:intergenic | 55.0% | |
| TCTCCATAGCTCCCTCGTTC+AGG | + | chr1.3:11484670-11484689 | MS.gene56048:intron | 55.0% | |
| TGCAACCGGAGAGAATGCTG+AGG | + | chr1.3:11479804-11479823 | MS.gene56048:CDS | 55.0% | |
| TGCACACTCACGCTCCTTGT+CGG | + | chr1.3:11482972-11482991 | MS.gene56048:intron | 55.0% | |
| TTTGGAGGGTGAGGAGTGAG+GGG | + | chr1.3:11479737-11479756 | MS.gene56048:CDS | 55.0% | |
| ! | AGTGGTGCTAACGACGTAGG+TGG | + | chr1.3:11481354-11481373 | MS.gene56048:intron | 55.0% |
| ! | GACGCCATCGTATTGGCAAC+TGG | + | chr1.3:11484761-11484780 | MS.gene56048:CDS | 55.0% |
| ! | GGAGGCTTTTGGCCCTTGAT+AGG | - | chr1.3:11480811-11480830 | None:intergenic | 55.0% |
| ! | GTGGTGCTAACGACGTAGGT+GGG | + | chr1.3:11481355-11481374 | MS.gene56048:intron | 55.0% |
| ! | TGGTGCTAACGACGTAGGTG+GGG | + | chr1.3:11481356-11481375 | MS.gene56048:intron | 55.0% |
| !! | AGTTCTAGAGGACCCAACCG+AGG | - | chr1.3:11482140-11482159 | None:intergenic | 55.0% |
| !! | GCCAGATATTCTGGGACGGA+GGG | + | chr1.3:11481873-11481892 | MS.gene56048:intron | 55.0% |
| AATCTGCACCGGATGCCACG+CGG | - | chr1.3:11483040-11483059 | None:intergenic | 60.0% | |
| GAGCGTGAGTGTGCAGAGGA+CGG | - | chr1.3:11482967-11482986 | None:intergenic | 60.0% | |
| GCCTGGACGTACCTGAACGA+GGG | - | chr1.3:11484684-11484703 | None:intergenic | 60.0% | |
| GGTGCTAACGACGTAGGTGG+GGG | + | chr1.3:11481357-11481376 | MS.gene56048:intron | 60.0% | |
| GTGGTTACCCGTGCAACTGG+TGG | + | chr1.3:11482049-11482068 | MS.gene56048:CDS | 60.0% | |
| TCCCTCGTTCAGGTACGTCC+AGG | + | chr1.3:11484680-11484699 | MS.gene56048:intron | 60.0% | |
| TGCCTGGACGTACCTGAACG+AGG | - | chr1.3:11484685-11484704 | None:intergenic | 60.0% | |
| ! | AGGGCACCCACATCTAGGAC+CGG | - | chr1.3:11482185-11482204 | None:intergenic | 60.0% |
| ! | CAAGGAGCGTGAGTGTGCAG+AGG | - | chr1.3:11482971-11482990 | None:intergenic | 60.0% |
| ! | CGTTTTCCGCAGCTGCTGCA+GGG | + | chr1.3:11480164-11480183 | MS.gene56048:intron | 60.0% |
| ! | TCGTTTTCCGCAGCTGCTGC+AGG | + | chr1.3:11480163-11480182 | MS.gene56048:intron | 60.0% |
| !! | GGCCAGATATTCTGGGACGG+AGG | + | chr1.3:11481872-11481891 | MS.gene56048:intron | 60.0% |
| !! | GGTTCGGTTTGGTTCGGCCT+CGG | + | chr1.3:11482120-11482139 | MS.gene56048:CDS | 60.0% |
| !! | GGTTTGGTTCGGCCTCGGTT+GGG | + | chr1.3:11482125-11482144 | MS.gene56048:CDS | 60.0% |
| !! | TGGCAAGGGCACCCACATCT+AGG | - | chr1.3:11482190-11482209 | None:intergenic | 60.0% |
| CACGCGTCCCCCAACAGTCA+AGG | + | chr1.3:11482926-11482945 | MS.gene56048:intron | 65.0% | |
| CTACAGCCCTGCAGCAGCTG+CGG | - | chr1.3:11480173-11480192 | None:intergenic | 65.0% | |
| GACTGTTGGGGGACGCGTGT+TGG | - | chr1.3:11482925-11482944 | None:intergenic | 65.0% | |
| GAGGGTGAGGAGTGAGGGGA+AGG | + | chr1.3:11479741-11479760 | MS.gene56048:CDS | 65.0% | |
| GAGTGAGGGGAAGGCGGGAA+TGG | + | chr1.3:11479750-11479769 | MS.gene56048:CDS | 65.0% | |
| GGTGAGGAGTGAGGGGAAGG+CGG | + | chr1.3:11479744-11479763 | MS.gene56048:CDS | 65.0% | |
| GTGAGGAGTGAGGGGAAGGC+GGG | + | chr1.3:11479745-11479764 | MS.gene56048:CDS | 65.0% | |
| ! | GTGTAGCACACGCGCCGACA+AGG | - | chr1.3:11482989-11483008 | None:intergenic | 65.0% |
| !! | CGGTTTGGTTCGGCCTCGGT+TGG | + | chr1.3:11482124-11482143 | MS.gene56048:CDS | 65.0% |
| AAGCAGCGCCGCGTGGCATC+CGG | + | chr1.3:11483029-11483048 | MS.gene56048:intron | 70.0% | |
| GCCAATGAAGCAGCGCCGCG+TGG | + | chr1.3:11483022-11483041 | MS.gene56048:intron | 70.0% | |
| GCCACGCGGCGCTGCTTCAT+TGG | - | chr1.3:11483026-11483045 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 11479358 | 11485697 | 11479358 | ID=MS.gene56048 |
| chr1.3 | mRNA | 11479358 | 11485697 | 11479358 | ID=MS.gene56048.t1;Parent=MS.gene56048 |
| chr1.3 | exon | 11479358 | 11480014 | 11479358 | ID=MS.gene56048.t1.exon1;Parent=MS.gene56048.t1 |
| chr1.3 | CDS | 11479358 | 11480014 | 11479358 | ID=cds.MS.gene56048.t1;Parent=MS.gene56048.t1 |
| chr1.3 | exon | 11481984 | 11482232 | 11481984 | ID=MS.gene56048.t1.exon2;Parent=MS.gene56048.t1 |
| chr1.3 | CDS | 11481984 | 11482232 | 11481984 | ID=cds.MS.gene56048.t1;Parent=MS.gene56048.t1 |
| chr1.3 | exon | 11484692 | 11484814 | 11484692 | ID=MS.gene56048.t1.exon3;Parent=MS.gene56048.t1 |
| chr1.3 | CDS | 11484692 | 11484814 | 11484692 | ID=cds.MS.gene56048.t1;Parent=MS.gene56048.t1 |
| chr1.3 | exon | 11485494 | 11485697 | 11485494 | ID=MS.gene56048.t1.exon4;Parent=MS.gene56048.t1 |
| chr1.3 | CDS | 11485494 | 11485697 | 11485494 | ID=cds.MS.gene56048.t1;Parent=MS.gene56048.t1 |
| Gene Sequence |
| Protein sequence |
