Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40340.t1 | XP_003603602.1 | 97 | 363 | 9 | 1 | 1 | 363 | 1 | 361 | 1.80E-205 | 724.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40340.t1 | Q8VZ59 | 69.4 | 366 | 97 | 4 | 1 | 363 | 1 | 354 | 2.2e-143 | 510.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40340.t1 | G7J3E6 | 97.0 | 363 | 9 | 1 | 1 | 363 | 1 | 361 | 1.3e-205 | 724.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40340 | MS.gene60245 | PPI |
| MS.gene29205 | MS.gene40340 | PPI |
| MS.gene015953 | MS.gene40340 | PPI |
| MS.gene94810 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene064951 | PPI |
| MS.gene86173 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene44331 | PPI |
| MS.gene36879 | MS.gene40340 | PPI |
| MS.gene09884 | MS.gene40340 | PPI |
| MS.gene64265 | MS.gene40340 | PPI |
| MS.gene049295 | MS.gene40340 | PPI |
| MS.gene57685 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene06418 | PPI |
| MS.gene24021 | MS.gene40340 | PPI |
| MS.gene013322 | MS.gene40340 | PPI |
| MS.gene059027 | MS.gene40340 | PPI |
| MS.gene018590 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene53594 | PPI |
| MS.gene40340 | MS.gene038029 | PPI |
| MS.gene44332 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene061851 | PPI |
| MS.gene23537 | MS.gene40340 | PPI |
| MS.gene51580 | MS.gene40340 | PPI |
| MS.gene40340 | MS.gene054944 | PPI |
| MS.gene019484 | MS.gene40340 | PPI |
| MS.gene027681 | MS.gene40340 | PPI |
| MS.gene61665 | MS.gene40340 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40340.t1 | MTR_3g109520 | 96.970 | 363 | 9 | 1 | 1 | 363 | 1 | 361 | 0.0 | 726 |
| MS.gene40340.t1 | MTR_1g008380 | 76.374 | 364 | 84 | 2 | 1 | 363 | 1 | 363 | 0.0 | 562 |
| MS.gene40340.t1 | MTR_6g086870 | 64.928 | 345 | 118 | 1 | 22 | 363 | 1 | 345 | 2.77e-168 | 476 |
| MS.gene40340.t1 | MTR_1g069275 | 60.588 | 340 | 131 | 2 | 25 | 363 | 9 | 346 | 1.33e-153 | 439 |
| MS.gene40340.t1 | MTR_7g099330 | 60.241 | 332 | 125 | 2 | 33 | 363 | 16 | 341 | 2.46e-148 | 425 |
| MS.gene40340.t1 | MTR_1g046230 | 60.180 | 334 | 131 | 1 | 32 | 363 | 15 | 348 | 4.88e-148 | 425 |
| MS.gene40340.t1 | MTR_1g011630 | 60.061 | 328 | 127 | 2 | 36 | 363 | 11 | 334 | 9.30e-148 | 423 |
| MS.gene40340.t1 | MTR_8g432640 | 46.749 | 323 | 166 | 2 | 42 | 363 | 7 | 324 | 4.02e-105 | 314 |
| MS.gene40340.t1 | MTR_5g033260 | 46.130 | 323 | 168 | 2 | 42 | 363 | 7 | 324 | 2.86e-101 | 304 |
| MS.gene40340.t1 | MTR_7g107690 | 45.820 | 323 | 169 | 2 | 42 | 363 | 9 | 326 | 1.21e-100 | 303 |
| MS.gene40340.t1 | MTR_7g099160 | 57.422 | 256 | 102 | 2 | 109 | 363 | 213 | 462 | 4.11e-100 | 306 |
| MS.gene40340.t1 | MTR_7g107710 | 46.914 | 324 | 165 | 3 | 42 | 363 | 7 | 325 | 3.12e-98 | 296 |
| MS.gene40340.t1 | MTR_4g051642 | 44.272 | 323 | 174 | 2 | 42 | 363 | 8 | 325 | 2.05e-95 | 290 |
| MS.gene40340.t1 | MTR_3g088925 | 44.272 | 323 | 174 | 2 | 42 | 363 | 8 | 325 | 4.25e-95 | 289 |
| MS.gene40340.t1 | MTR_3g088945 | 43.963 | 323 | 175 | 2 | 42 | 363 | 8 | 325 | 2.93e-94 | 286 |
| MS.gene40340.t1 | MTR_3g088955 | 44.272 | 323 | 174 | 2 | 42 | 363 | 8 | 325 | 1.21e-93 | 285 |
| MS.gene40340.t1 | MTR_3g096030 | 39.773 | 176 | 82 | 1 | 42 | 217 | 7 | 158 | 3.47e-40 | 139 |
| MS.gene40340.t1 | MTR_3g437580 | 25.969 | 258 | 149 | 7 | 43 | 267 | 15 | 263 | 1.50e-17 | 83.2 |
| MS.gene40340.t1 | MTR_8g037880 | 25.943 | 212 | 124 | 6 | 43 | 226 | 6 | 212 | 2.39e-17 | 83.2 |
| MS.gene40340.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 3.11e-17 | 81.3 |
| MS.gene40340.t1 | MTR_3g437580 | 25.210 | 238 | 137 | 6 | 43 | 247 | 15 | 244 | 3.57e-17 | 82.8 |
| MS.gene40340.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 4.55e-17 | 81.3 |
| MS.gene40340.t1 | MTR_8g037910 | 25.238 | 210 | 127 | 4 | 43 | 226 | 6 | 211 | 8.09e-17 | 81.6 |
| MS.gene40340.t1 | MTR_2g450310 | 29.084 | 251 | 132 | 13 | 42 | 251 | 6 | 251 | 2.51e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40340.t1 | AT5G25620 | 69.399 | 366 | 97 | 4 | 1 | 363 | 1 | 354 | 0.0 | 508 |
| MS.gene40340.t1 | AT5G25620 | 69.399 | 366 | 97 | 4 | 1 | 363 | 1 | 354 | 2.15e-180 | 507 |
| MS.gene40340.t1 | AT4G13260 | 64.986 | 357 | 113 | 1 | 7 | 363 | 6 | 350 | 1.26e-169 | 479 |
| MS.gene40340.t1 | AT4G28720 | 60.117 | 341 | 134 | 1 | 25 | 363 | 9 | 349 | 1.13e-155 | 444 |
| MS.gene40340.t1 | AT4G13260 | 64.465 | 318 | 101 | 1 | 7 | 324 | 6 | 311 | 9.99e-149 | 422 |
| MS.gene40340.t1 | AT2G33230 | 61.976 | 334 | 124 | 1 | 33 | 363 | 24 | 357 | 1.44e-148 | 426 |
| MS.gene40340.t1 | AT5G11320 | 60.060 | 333 | 127 | 1 | 31 | 363 | 7 | 333 | 1.49e-148 | 424 |
| MS.gene40340.t1 | AT1G04610 | 58.065 | 341 | 140 | 1 | 26 | 363 | 22 | 362 | 1.86e-147 | 424 |
| MS.gene40340.t1 | AT1G04180 | 61.377 | 334 | 126 | 3 | 31 | 363 | 15 | 346 | 6.20e-147 | 422 |
| MS.gene40340.t1 | AT5G11320 | 60.060 | 333 | 127 | 1 | 31 | 363 | 7 | 333 | 7.07e-147 | 421 |
| MS.gene40340.t1 | AT5G43890 | 60.294 | 340 | 132 | 3 | 27 | 363 | 10 | 349 | 1.35e-145 | 419 |
| MS.gene40340.t1 | AT4G32540 | 56.069 | 346 | 144 | 3 | 19 | 363 | 1 | 339 | 3.84e-142 | 409 |
| MS.gene40340.t1 | AT4G32540 | 56.034 | 348 | 143 | 4 | 19 | 363 | 1 | 341 | 1.69e-140 | 405 |
| MS.gene40340.t1 | AT4G13260 | 67.917 | 240 | 77 | 0 | 124 | 363 | 8 | 247 | 6.80e-113 | 331 |
| MS.gene40340.t1 | AT1G21430 | 48.607 | 323 | 158 | 3 | 42 | 363 | 10 | 325 | 4.13e-105 | 314 |
| MS.gene40340.t1 | AT1G48910 | 45.511 | 323 | 170 | 2 | 42 | 363 | 6 | 323 | 5.15e-101 | 303 |
| MS.gene40340.t1 | AT5G07800 | 26.724 | 232 | 136 | 6 | 30 | 227 | 5 | 236 | 5.78e-18 | 85.5 |
| MS.gene40340.t1 | AT5G61290 | 29.185 | 233 | 120 | 9 | 43 | 234 | 18 | 246 | 1.97e-17 | 83.6 |
| MS.gene40340.t1 | AT1G12140 | 27.586 | 261 | 144 | 8 | 33 | 259 | 5 | 254 | 8.59e-15 | 75.9 |
| MS.gene40340.t1 | AT1G12140 | 27.586 | 261 | 144 | 8 | 33 | 259 | 5 | 254 | 8.59e-15 | 75.9 |
| MS.gene40340.t1 | AT1G65860 | 27.103 | 214 | 122 | 7 | 43 | 226 | 15 | 224 | 3.53e-14 | 73.9 |
| MS.gene40340.t1 | AT1G62620 | 24.766 | 214 | 131 | 5 | 43 | 226 | 15 | 228 | 7.92e-14 | 72.4 |
| MS.gene40340.t1 | AT1G63370 | 24.299 | 214 | 132 | 5 | 43 | 226 | 15 | 228 | 1.80e-13 | 71.2 |
| MS.gene40340.t1 | AT1G62620 | 24.651 | 215 | 132 | 5 | 42 | 226 | 14 | 228 | 2.22e-13 | 71.6 |
| MS.gene40340.t1 | AT1G12130 | 25.000 | 200 | 119 | 6 | 57 | 226 | 29 | 227 | 3.80e-13 | 70.9 |
| MS.gene40340.t1 | AT1G63370 | 24.186 | 215 | 133 | 5 | 42 | 226 | 14 | 228 | 4.09e-13 | 70.5 |
| MS.gene40340.t1 | AT1G12200 | 25.980 | 204 | 116 | 7 | 57 | 227 | 30 | 231 | 9.24e-13 | 69.3 |
| MS.gene40340.t1 | AT1G12200 | 25.980 | 204 | 116 | 7 | 57 | 227 | 30 | 231 | 1.14e-12 | 69.3 |
| MS.gene40340.t1 | AT1G12160 | 23.750 | 240 | 145 | 8 | 43 | 254 | 14 | 243 | 3.03e-12 | 68.2 |
| MS.gene40340.t1 | AT1G12140 | 27.203 | 261 | 143 | 9 | 33 | 259 | 5 | 252 | 4.10e-12 | 67.8 |
Find 84 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGTGAATTACCCTTTA+TGG | 0.057569 | 3.3:-89815619 | MS.gene40340:CDS |
| GTTGTTGGTTGTGGTAATTC+TGG | 0.228655 | 3.3:-89815264 | MS.gene40340:CDS |
| GCTGAATTTGATGGTAAAAT+TGG | 0.229798 | 3.3:-89815483 | MS.gene40340:CDS |
| ATTGAAGGTGTAGATGAATT+TGG | 0.230080 | 3.3:-89815351 | MS.gene40340:CDS |
| TGCTAGGAAAATCAACTTTC+GGG | 0.237487 | 3.3:-89814274 | MS.gene40340:CDS |
| GGTAATTCACAGAATTGTTT+TGG | 0.279240 | 3.3:+89815627 | None:intergenic |
| CTAATTGTGTGGCTTCATTA+TGG | 0.292482 | 3.3:-89815686 | MS.gene40340:CDS |
| AATGTGTCCACCTTTAATTT+TGG | 0.293841 | 3.3:+89814073 | None:intergenic |
| GAAGATTATGCAGAGAGTTT+TGG | 0.298205 | 3.3:-89815540 | MS.gene40340:CDS |
| TGGGTTGGATCGTCCTCGTT+TGG | 0.307911 | 3.3:-89814156 | MS.gene40340:CDS |
| GGTACCCTTGCCAAAATTAA+AGG | 0.309195 | 3.3:-89814083 | MS.gene40340:CDS |
| AATTAAAGGTGGACACATTA+AGG | 0.324307 | 3.3:-89814069 | MS.gene40340:intron |
| TTCTCTTGTTGTTCGAGATT+CGG | 0.332436 | 3.3:-89815199 | MS.gene40340:intron |
| GGTTCTTGCTCATAGTTTCA+TGG | 0.338911 | 3.3:-89814205 | MS.gene40340:CDS |
| GTTTAGAGGGAAGAAAGTTT+TGG | 0.342078 | 3.3:-89815286 | MS.gene40340:CDS |
| TCATCTACACCTTCAATATT+AGG | 0.342806 | 3.3:+89815357 | None:intergenic |
| ATCGTAGGAGCAGGACCTTC+TGG | 0.343082 | 3.3:-89815768 | MS.gene40340:CDS |
| ATGCTAGGAAAATCAACTTT+CGG | 0.354338 | 3.3:-89814275 | MS.gene40340:CDS |
| ATGAATTTGGAGGGGTTGTA+AGG | 0.372048 | 3.3:-89815338 | MS.gene40340:CDS |
| ATCTGAGGGGAATTCCATAA+AGG | 0.386429 | 3.3:+89815605 | None:intergenic |
| ACAAAAGCAATGTTCCCTAT+TGG | 0.386603 | 3.3:-89812957 | MS.gene40340:CDS |
| GGGTTGGATCGTCCTCGTTT+GGG | 0.392628 | 3.3:-89814155 | MS.gene40340:CDS |
| ATATCATACCTTGAGCCAAT+AGG | 0.393501 | 3.3:+89812942 | None:intergenic |
| CTTGGTGACACTGCTCAACT+TGG | 0.407645 | 3.3:-89814176 | MS.gene40340:CDS |
| TATCATACCTTGAGCCAATA+GGG | 0.429202 | 3.3:+89812943 | None:intergenic |
| GTTACTCAAGTGGTTTCCAT+TGG | 0.431641 | 3.3:-89814240 | MS.gene40340:CDS |
| TTACTCAAGTGGTTTCCATT+GGG | 0.437213 | 3.3:-89814239 | MS.gene40340:CDS |
| CGTCGTCGCGTGTTTGTTCA+AGG | 0.449077 | 3.3:-89815798 | MS.gene40340:CDS |
| CGGAGAGGTTCTTGAGTTGA+AGG | 0.449506 | 3.3:+89814129 | None:intergenic |
| ATAGTTTCATGGCTTATGCT+TGG | 0.449906 | 3.3:-89814194 | MS.gene40340:CDS |
| TATTGCTTAAGAGAGTTAGA+AGG | 0.452128 | 3.3:-89815888 | MS.gene40340:CDS |
| TTCCATTGGGACTTGTCGAT+CGG | 0.454350 | 3.3:-89814226 | MS.gene40340:CDS |
| GATGGCATCATATTGGCAAC+CGG | 0.459043 | 3.3:-89812982 | MS.gene40340:CDS |
| GTGCAAAATGCTGAATTTGA+TGG | 0.462235 | 3.3:-89815492 | MS.gene40340:CDS |
| TTGATGGTAAAATTGGTTGT+TGG | 0.471687 | 3.3:-89815476 | MS.gene40340:CDS |
| CACACAGTGGAATTCGTAGA+TGG | 0.480947 | 3.3:-89813021 | MS.gene40340:CDS |
| AAAAGTGGTGAAGAGTTTAG+AGG | 0.487823 | 3.3:-89815300 | MS.gene40340:CDS |
| TCTGAGGGGAATTCCATAAA+GGG | 0.494865 | 3.3:+89815606 | None:intergenic |
| AAAGTGGTGAAGAGTTTAGA+GGG | 0.496476 | 3.3:-89815299 | MS.gene40340:CDS |
| TGACACTGCTCAACTTGGGT+TGG | 0.497517 | 3.3:-89814171 | MS.gene40340:CDS |
| TGGTTGTGGTAATTCTGGTA+TGG | 0.510440 | 3.3:-89815259 | MS.gene40340:CDS |
| ACAACAGTTCATAAAGTACT+TGG | 0.510479 | 3.3:-89815562 | MS.gene40340:CDS |
| TGTCCATGTGGTTACTCAAG+TGG | 0.513763 | 3.3:-89814250 | MS.gene40340:CDS |
| CGTTGGTTGATCGTTGCGAC+CGG | 0.515903 | 3.3:-89815402 | MS.gene40340:CDS |
| CTACGGAATATGTTTGTCGT+TGG | 0.522172 | 3.3:-89815419 | MS.gene40340:CDS |
| CATACAAGTTTGTATAAAAG+TGG | 0.522680 | 3.3:-89815315 | MS.gene40340:CDS |
| TCGCGTGTTTGTTCAAGGAC+CGG | 0.525756 | 3.3:-89815793 | MS.gene40340:CDS |
| GAAGGTGTAGATGAATTTGG+AGG | 0.528940 | 3.3:-89815348 | MS.gene40340:CDS |
| AAGGTGTAGATGAATTTGGA+GGG | 0.531621 | 3.3:-89815347 | MS.gene40340:CDS |
| CTTCAACTCAAGAACCTCTC+CGG | 0.537129 | 3.3:-89814128 | MS.gene40340:CDS |
| GGAGAGGTTCTTGAGTTGAA+GGG | 0.547836 | 3.3:+89814130 | None:intergenic |
| TTGGTGACACTGCTCAACTT+GGG | 0.549242 | 3.3:-89814175 | MS.gene40340:CDS |
| GCTGTTGTGCCTAATATTGA+AGG | 0.549425 | 3.3:-89815366 | MS.gene40340:CDS |
| GGGTATGTTGGGAAATCTGA+GGG | 0.551955 | 3.3:+89815591 | None:intergenic |
| CAACTTTCGGGTTGTCCATG+TGG | 0.556906 | 3.3:-89814262 | MS.gene40340:CDS |
| AACAGCTTCTGCATTCTCAC+CGG | 0.560263 | 3.3:+89815383 | None:intergenic |
| TTCCTAGCATCTCTCGTGGT+AGG | 0.560936 | 3.3:+89814288 | None:intergenic |
| GGTCCTGCTCCTACGATCAC+CGG | 0.561323 | 3.3:+89815774 | None:intergenic |
| TAGTAAAGGGGATGTAACTA+CGG | 0.564472 | 3.3:-89815436 | MS.gene40340:CDS |
| AGGTACGACCAAGCATAAAA+CGG | 0.569581 | 3.3:-89813053 | MS.gene40340:CDS |
| GGACCGGTGATCGTAGGAGC+AGG | 0.570039 | 3.3:-89815777 | MS.gene40340:CDS |
| CAAGAGAAGGAGTAGCATCA+TGG | 0.589521 | 3.3:+89815214 | None:intergenic |
| AGGGTATGTTGGGAAATCTG+AGG | 0.590255 | 3.3:+89815590 | None:intergenic |
| GTTCAAGGACCGGTGATCGT+AGG | 0.596331 | 3.3:-89815783 | MS.gene40340:CDS |
| AGGGTACCCACATCTAAGAC+AGG | 0.599272 | 3.3:+89814098 | None:intergenic |
| GAGAGGTTCTTGAGTTGAAG+GGG | 0.600506 | 3.3:+89814131 | None:intergenic |
| AAAACTCCTGTCTTAGATGT+GGG | 0.603155 | 3.3:-89814104 | MS.gene40340:CDS |
| CAATGTTCCCTATTGGCTCA+AGG | 0.610422 | 3.3:-89812950 | None:intergenic |
| TGCACTGTCTCATTAAACCG+TGG | 0.610645 | 3.3:+89815510 | None:intergenic |
| AACCGATCGACAAGTCCCAA+TGG | 0.612719 | 3.3:+89814224 | None:intergenic |
| GAATCTCGAACAACAAGAGA+AGG | 0.614342 | 3.3:+89815201 | None:intergenic |
| ACCCTTGCCAAAATTAAAGG+TGG | 0.619165 | 3.3:-89814080 | MS.gene40340:CDS |
| ATGAAGACGTAATCGATCGT+AGG | 0.621938 | 3.3:+89815653 | None:intergenic |
| GATCTTTCTAGTATTACACA+TGG | 0.634588 | 3.3:+89815708 | None:intergenic |
| CAGTGGAATTCGTAGATGGA+AGG | 0.636435 | 3.3:-89813017 | MS.gene40340:CDS |
| GTCCTACCACGAGAGATGCT+AGG | 0.644002 | 3.3:-89814290 | MS.gene40340:CDS |
| CAACAAATCATCATCAACAA+CGG | 0.644186 | 3.3:-89815823 | MS.gene40340:CDS |
| GCAGCTGCTGCTAAACCAGA+AGG | 0.646911 | 3.3:+89815753 | None:intergenic |
| ACTAGAAAGATCTAATTGTG+TGG | 0.651949 | 3.3:-89815697 | MS.gene40340:CDS |
| AGTTGAAGGGGACCCAAACG+AGG | 0.670978 | 3.3:+89814143 | None:intergenic |
| AAACCACTTGAGTAACCACA+TGG | 0.674308 | 3.3:+89814247 | None:intergenic |
| AGGTGTAGATGAATTTGGAG+GGG | 0.681560 | 3.3:-89815346 | MS.gene40340:CDS |
| GGTATGTTGGGAAATCTGAG+GGG | 0.693219 | 3.3:+89815592 | None:intergenic |
| ACGGTTAAAACGTCACACAG+TGG | 0.719614 | 3.3:-89813034 | MS.gene40340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTATATTATTT+TGG | + | chr3.3:89813994-89814013 | None:intergenic | 0.0% |
| !! | AATCTAATGAAAATAATAAT+GGG | + | chr3.3:89815689-89815708 | None:intergenic | 10.0% |
| !! | TAATCTAATGAAAATAATAA+TGG | + | chr3.3:89815690-89815709 | None:intergenic | 10.0% |
| !!! | TATCATTATTTAATTTACTA+TGG | - | chr3.3:89814508-89814527 | MS.gene40340:intron | 10.0% |
| !!! | TCAAAATTACATTTTTTATT+GGG | + | chr3.3:89814034-89814053 | None:intergenic | 10.0% |
| !!! | TTCAAAATTACATTTTTTAT+TGG | + | chr3.3:89814035-89814054 | None:intergenic | 10.0% |
| !! | AAATAAGAAACCTAAAAAAT+TGG | + | chr3.3:89813962-89813981 | None:intergenic | 15.0% |
| !! | AAATGGAAATTAATTAAACT+AGG | + | chr3.3:89813939-89813958 | None:intergenic | 15.0% |
| !! | AAATTAATTAAACTAGGTTT+GGG | + | chr3.3:89813933-89813952 | None:intergenic | 15.0% |
| !! | TATAAATAAGAAACTAATAG+TGG | - | chr3.3:89815209-89815228 | MS.gene40340:CDS | 15.0% |
| !! | TGAACAAAAAATTCTAAATA+AGG | + | chr3.3:89813794-89813813 | None:intergenic | 15.0% |
| !! | TTCAAATTTCAATGAAATAT+TGG | + | chr3.3:89814969-89814988 | None:intergenic | 15.0% |
| !!! | TTTTATAAATATTTTCTCGA+TGG | - | chr3.3:89815175-89815194 | MS.gene40340:intron | 15.0% |
| !!! | TTTTTTGAACAAATCTATTT+CGG | + | chr3.3:89814167-89814186 | None:intergenic | 15.0% |
| !! | AAAAAAACCTAAAAATCGAT+TGG | - | chr3.3:89815757-89815776 | MS.gene40340:CDS | 20.0% |
| !! | AAAGCATAAAGGAAATAATT+AGG | + | chr3.3:89815237-89815256 | None:intergenic | 20.0% |
| !! | AGCTAATCAACAAAAAAAAT+TGG | - | chr3.3:89815436-89815455 | MS.gene40340:CDS | 20.0% |
| !! | ATATATAAAAAAGAGAGAGA+AGG | + | chr3.3:89815282-89815301 | None:intergenic | 20.0% |
| !! | ATTAAAAATCAAATTTGTGG+AGG | + | chr3.3:89814066-89814085 | None:intergenic | 20.0% |
| !! | GAAATTAATTAAACTAGGTT+TGG | + | chr3.3:89813934-89813953 | None:intergenic | 20.0% |
| !! | GAGATTAAAAATCAAATTTG+TGG | + | chr3.3:89814069-89814088 | None:intergenic | 20.0% |
| !! | TACAAAACAACCAATTAAAA+AGG | + | chr3.3:89813883-89813902 | None:intergenic | 20.0% |
| !! | TTCATTAGATTAGATTGTTA+GGG | - | chr3.3:89815698-89815717 | MS.gene40340:CDS | 20.0% |
| !! | TTTCATTAGATTAGATTGTT+AGG | - | chr3.3:89815697-89815716 | MS.gene40340:CDS | 20.0% |
| !!! | ACTAATTTGATTTGATAGAA+AGG | + | chr3.3:89814819-89814838 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTTGTAAATGA+AGG | - | chr3.3:89814527-89814546 | MS.gene40340:intron | 20.0% |
| !!! | ATTTCCATTTCCAATTTTTT+AGG | - | chr3.3:89813949-89813968 | MS.gene40340:intron | 20.0% |
| !!! | ATTTCTACTTCCTTTTTAAT+TGG | - | chr3.3:89813870-89813889 | MS.gene40340:intron | 20.0% |
| !!! | CTAATTTGATTTGATAGAAA+GGG | + | chr3.3:89814818-89814837 | None:intergenic | 20.0% |
| !!! | GAGAAGAAAAAATTGTTTTA+TGG | - | chr3.3:89813726-89813745 | MS.gene40340:intron | 20.0% |
| !!! | TCCATTTCTTTATTTTTTCT+TGG | - | chr3.3:89815334-89815353 | MS.gene40340:CDS | 20.0% |
| !!! | TGAAGAGTTTTAATAGTAAA+GGG | - | chr3.3:89813396-89813415 | MS.gene40340:intron | 20.0% |
| !!! | TGGAAGTTTTTATTTTTTGA+AGG | - | chr3.3:89813746-89813765 | MS.gene40340:intron | 20.0% |
| !!! | TTATAACTGTCTTTTGAAAA+TGG | - | chr3.3:89813691-89813710 | MS.gene40340:intron | 20.0% |
| !!! | TTCATTGTTTTCATGAATAA+AGG | + | chr3.3:89812999-89813018 | None:intergenic | 20.0% |
| !!! | TTGAAGAGTTTTAATAGTAA+AGG | - | chr3.3:89813395-89813414 | MS.gene40340:intron | 20.0% |
| !!! | TTTTTTGTTCAATTTGATGA+AGG | - | chr3.3:89813803-89813822 | MS.gene40340:intron | 20.0% |
| ! | AAAAGGAAGTAGAAATCAAA+AGG | + | chr3.3:89813866-89813885 | None:intergenic | 25.0% |
| ! | ATGTGATTTCAATCAAATCA+TGG | - | chr3.3:89815374-89815393 | MS.gene40340:CDS | 25.0% |
| ! | CATACAAGTTTGTATAAAAG+TGG | - | chr3.3:89813530-89813549 | MS.gene40340:intron | 25.0% |
| ! | GAAACCTAAAAAATTGGAAA+TGG | + | chr3.3:89813956-89813975 | None:intergenic | 25.0% |
| ! | GCCAAGAAAAAATAAAGAAA+TGG | + | chr3.3:89815338-89815357 | None:intergenic | 25.0% |
| ! | TTGATAGAAAGGGAAATATA+GGG | + | chr3.3:89814808-89814827 | None:intergenic | 25.0% |
| ! | TTTGATAGAAAGGGAAATAT+AGG | + | chr3.3:89814809-89814828 | None:intergenic | 25.0% |
| !! | ATAAGAGAAATGTTAACTTG+TGG | + | chr3.3:89815643-89815662 | None:intergenic | 25.0% |
| !! | ATCATTTTATTGCACTTTCT+TGG | - | chr3.3:89814235-89814254 | MS.gene40340:CDS | 25.0% |
| !!! | ATGTTGATTCATGTACTAAA+TGG | - | chr3.3:89814286-89814305 | MS.gene40340:CDS | 25.0% |
| !!! | GAAGAGTTTTAATAGTAAAG+GGG | - | chr3.3:89813397-89813416 | MS.gene40340:intron | 25.0% |
| !!! | TTATGAACTGTTGTTTTGAA+GGG | + | chr3.3:89813277-89813296 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTAGAGTATGTT+CGG | + | chr3.3:89815048-89815067 | None:intergenic | 25.0% |
| !!! | TTTATGAACTGTTGTTTTGA+AGG | + | chr3.3:89813278-89813297 | None:intergenic | 25.0% |
| AAAACACCCAGAAAAATCAT+GGG | + | chr3.3:89814362-89814381 | None:intergenic | 30.0% | |
| AATTAAAGGTGGACACATTA+AGG | - | chr3.3:89814776-89814795 | MS.gene40340:intron | 30.0% | |
| ACTAGAAAGATCTAATTGTG+TGG | - | chr3.3:89813148-89813167 | MS.gene40340:intron | 30.0% | |
| ATGCTAGGAAAATCAACTTT+CGG | - | chr3.3:89814570-89814589 | MS.gene40340:intron | 30.0% | |
| ATTCTGTGAATTACCCTTTA+TGG | - | chr3.3:89813226-89813245 | MS.gene40340:intron | 30.0% | |
| CAACAAATCATCATCAACAA+CGG | - | chr3.3:89813022-89813041 | MS.gene40340:CDS | 30.0% | |
| GCAAAGCAAGAATTAAACAA+GGG | + | chr3.3:89814122-89814141 | None:intergenic | 30.0% | |
| TATTGCTTAAGAGAGTTAGA+AGG | - | chr3.3:89812957-89812976 | MS.gene40340:CDS | 30.0% | |
| TCATCTACACCTTCAATATT+AGG | + | chr3.3:89813491-89813510 | None:intergenic | 30.0% | |
| TCTAAGAATGATTCTTGATC+AGG | - | chr3.3:89815079-89815098 | MS.gene40340:intron | 30.0% | |
| TGCAAAGCAAGAATTAAACA+AGG | + | chr3.3:89814123-89814142 | None:intergenic | 30.0% | |
| TTATTTGAATCATGCTTGGT+GGG | - | chr3.3:89815659-89815678 | MS.gene40340:CDS | 30.0% | |
| ! | ACAACAGTTCATAAAGTACT+TGG | - | chr3.3:89813283-89813302 | MS.gene40340:intron | 30.0% |
| ! | ATTGAAGGTGTAGATGAATT+TGG | - | chr3.3:89813494-89813513 | MS.gene40340:intron | 30.0% |
| ! | CAACAGAATGTTTCTATCTT+TGG | - | chr3.3:89815595-89815614 | MS.gene40340:CDS | 30.0% |
| ! | GATCTTTCTAGTATTACACA+TGG | + | chr3.3:89813140-89813159 | None:intergenic | 30.0% |
| ! | GCTGAATTTGATGGTAAAAT+TGG | - | chr3.3:89813362-89813381 | MS.gene40340:intron | 30.0% |
| ! | GGTAATTCACAGAATTGTTT+TGG | + | chr3.3:89813221-89813240 | None:intergenic | 30.0% |
| ! | TCTCTTATTTGAATCATGCT+TGG | - | chr3.3:89815655-89815674 | MS.gene40340:CDS | 30.0% |
| ! | TTGATGGTAAAATTGGTTGT+TGG | - | chr3.3:89813369-89813388 | MS.gene40340:intron | 30.0% |
| !! | AATGTGTCCACCTTTAATTT+TGG | + | chr3.3:89814775-89814794 | None:intergenic | 30.0% |
| !! | GAATTTTGATGGCATCATAT+TGG | - | chr3.3:89815856-89815875 | MS.gene40340:CDS | 30.0% |
| !!! | GAGATATTTTAACTGAGATC+TGG | - | chr3.3:89814897-89814916 | MS.gene40340:intron | 30.0% |
| AAAAACTCCTGTCTTAGATG+TGG | - | chr3.3:89814740-89814759 | MS.gene40340:intron | 35.0% | |
| AAAACTCCTGTCTTAGATGT+GGG | - | chr3.3:89814741-89814760 | MS.gene40340:intron | 35.0% | |
| AAAAGTGGTGAAGAGTTTAG+AGG | - | chr3.3:89813545-89813564 | MS.gene40340:intron | 35.0% | |
| AAAGTGGTGAAGAGTTTAGA+GGG | - | chr3.3:89813546-89813565 | MS.gene40340:intron | 35.0% | |
| AAGGTGTAGATGAATTTGGA+GGG | - | chr3.3:89813498-89813517 | MS.gene40340:intron | 35.0% | |
| ACAAAAGCAATGTTCCCTAT+TGG | - | chr3.3:89815888-89815907 | MS.gene40340:CDS | 35.0% | |
| ATAGTTTCATGGCTTATGCT+TGG | - | chr3.3:89814651-89814670 | MS.gene40340:intron | 35.0% | |
| ATCAGGTGTAATGTGAGATT+TGG | - | chr3.3:89815096-89815115 | MS.gene40340:intron | 35.0% | |
| ATTTCGGAACTTGAAACCTA+TGG | + | chr3.3:89814151-89814170 | None:intergenic | 35.0% | |
| CTAATTGTGTGGCTTCATTA+TGG | - | chr3.3:89813159-89813178 | MS.gene40340:intron | 35.0% | |
| CTTATTTGAATCATGCTTGG+TGG | - | chr3.3:89815658-89815677 | MS.gene40340:CDS | 35.0% | |
| GAAAACACCCAGAAAAATCA+TGG | + | chr3.3:89814363-89814382 | None:intergenic | 35.0% | |
| GCACTTGATGTAAAGCATAA+AGG | + | chr3.3:89815248-89815267 | None:intergenic | 35.0% | |
| GTCAAACCAAAAAAAGCAGT+GGG | + | chr3.3:89814449-89814468 | None:intergenic | 35.0% | |
| GTCAAGCCTAAGAATGATTA+TGG | - | chr3.3:89814938-89814957 | MS.gene40340:intron | 35.0% | |
| GTGCAAAATGCTGAATTTGA+TGG | - | chr3.3:89813353-89813372 | MS.gene40340:intron | 35.0% | |
| GTGTTGCCATAATCATTCTT+AGG | + | chr3.3:89814947-89814966 | None:intergenic | 35.0% | |
| TAGTAAAGGGGATGTAACTA+CGG | - | chr3.3:89813409-89813428 | MS.gene40340:intron | 35.0% | |
| TCAAACCAAAAAAAGCAGTG+GGG | + | chr3.3:89814448-89814467 | None:intergenic | 35.0% | |
| TCAGGTGTAATGTGAGATTT+GGG | - | chr3.3:89815097-89815116 | MS.gene40340:intron | 35.0% | |
| TGCTAGGAAAATCAACTTTC+GGG | - | chr3.3:89814571-89814590 | MS.gene40340:intron | 35.0% | |
| TGTCAAACCAAAAAAAGCAG+TGG | + | chr3.3:89814450-89814469 | None:intergenic | 35.0% | |
| TTACTCAAGTGGTTTCCATT+GGG | - | chr3.3:89814606-89814625 | MS.gene40340:intron | 35.0% | |
| TTTCGGAACTTGAAACCTAT+GGG | + | chr3.3:89814150-89814169 | None:intergenic | 35.0% | |
| ! | CCTAAAAATCGATTGGTCAT+TGG | - | chr3.3:89815764-89815783 | MS.gene40340:CDS | 35.0% |
| ! | GAAGATTATGCAGAGAGTTT+TGG | - | chr3.3:89813305-89813324 | MS.gene40340:intron | 35.0% |
| ! | GTAATGTGAGATTTGGGTTA+TGG | - | chr3.3:89815103-89815122 | MS.gene40340:intron | 35.0% |
| ! | GTTTAGAGGGAAGAAAGTTT+TGG | - | chr3.3:89813559-89813578 | MS.gene40340:intron | 35.0% |
| !! | ATCTAAGACAGGAGTTTTTC+CGG | + | chr3.3:89814739-89814758 | None:intergenic | 35.0% |
| !! | ATGCAGAGAGTTTTGGTATT+AGG | - | chr3.3:89813312-89813331 | MS.gene40340:intron | 35.0% |
| !! | ATTCTTAACTTGTGCCCTTT+GGG | + | chr3.3:89815496-89815515 | None:intergenic | 35.0% |
| !! | CCAATGACCAATCGATTTTT+AGG | + | chr3.3:89815767-89815786 | None:intergenic | 35.0% |
| !! | CGTTTTAACCGTTTTATGCT+TGG | + | chr3.3:89815803-89815822 | None:intergenic | 35.0% |
| !! | TCCACCTTTAATTTTGGCAA+GGG | + | chr3.3:89814769-89814788 | None:intergenic | 35.0% |
| !! | TTCTCTTGTTGTTCGAGATT+CGG | - | chr3.3:89813646-89813665 | MS.gene40340:intron | 35.0% |
| !!! | AAAGTTTTGGTTGTTGGTTG+TGG | - | chr3.3:89813572-89813591 | MS.gene40340:intron | 35.0% |
| !!! | GTTGTTTTGAAGGGTATGTT+GGG | + | chr3.3:89813268-89813287 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTGAAGGGTATGT+TGG | + | chr3.3:89813269-89813288 | None:intergenic | 35.0% |
| AAAAAAAGCAGTGGGGGAAA+AGG | + | chr3.3:89814441-89814460 | None:intergenic | 40.0% | |
| AAACCACTTGAGTAACCACA+TGG | + | chr3.3:89814601-89814620 | None:intergenic | 40.0% | |
| ACCCTTGCCAAAATTAAAGG+TGG | - | chr3.3:89814765-89814784 | MS.gene40340:intron | 40.0% | |
| AGGTACGACCAAGCATAAAA+CGG | - | chr3.3:89815792-89815811 | MS.gene40340:CDS | 40.0% | |
| AGGTGTAGATGAATTTGGAG+GGG | - | chr3.3:89813499-89813518 | MS.gene40340:intron | 40.0% | |
| ATCTGAGGGGAATTCCATAA+AGG | + | chr3.3:89813243-89813262 | None:intergenic | 40.0% | |
| ATGAAGACGTAATCGATCGT+AGG | + | chr3.3:89813195-89813214 | None:intergenic | 40.0% | |
| ATGAATTTGGAGGGGTTGTA+AGG | - | chr3.3:89813507-89813526 | MS.gene40340:intron | 40.0% | |
| CAAACCAAAAAAAGCAGTGG+GGG | + | chr3.3:89814447-89814466 | None:intergenic | 40.0% | |
| CTACGGAATATGTTTGTCGT+TGG | - | chr3.3:89813426-89813445 | MS.gene40340:intron | 40.0% | |
| GAATCTCGAACAACAAGAGA+AGG | + | chr3.3:89813647-89813666 | None:intergenic | 40.0% | |
| GCTGTTGTGCCTAATATTGA+AGG | - | chr3.3:89813479-89813498 | MS.gene40340:intron | 40.0% | |
| GGTACCCTTGCCAAAATTAA+AGG | - | chr3.3:89814762-89814781 | MS.gene40340:intron | 40.0% | |
| GGTTCTTGCTCATAGTTTCA+TGG | - | chr3.3:89814640-89814659 | MS.gene40340:intron | 40.0% | |
| GTTACTCAAGTGGTTTCCAT+TGG | - | chr3.3:89814605-89814624 | MS.gene40340:intron | 40.0% | |
| TAGCGCTAGTATTAGTTGGT+TGG | - | chr3.3:89815126-89815145 | MS.gene40340:intron | 40.0% | |
| TATTGGGAGATAGTGCTTGA+TGG | + | chr3.3:89814018-89814037 | None:intergenic | 40.0% | |
| TCTGAGGGGAATTCCATAAA+GGG | + | chr3.3:89813242-89813261 | None:intergenic | 40.0% | |
| TCTTATAGAGCTAGCTAGCA+TGG | + | chr3.3:89814879-89814898 | None:intergenic | 40.0% | |
| TGGTTGTGGTAATTCTGGTA+TGG | - | chr3.3:89813586-89813605 | MS.gene40340:intron | 40.0% | |
| ! | ACCACACCCATGATTTTTCT+GGG | - | chr3.3:89814353-89814372 | MS.gene40340:intron | 40.0% |
| ! | ATCATGGACGAAAGCACAAT+TGG | - | chr3.3:89815390-89815409 | MS.gene40340:CDS | 40.0% |
| ! | ATGGTAGCGCTAGTATTAGT+TGG | - | chr3.3:89815122-89815141 | MS.gene40340:intron | 40.0% |
| ! | GAAGGTGTAGATGAATTTGG+AGG | - | chr3.3:89813497-89813516 | MS.gene40340:intron | 40.0% |
| ! | GGAAGGTCAGAGAATTTTGA+TGG | - | chr3.3:89815845-89815864 | MS.gene40340:CDS | 40.0% |
| ! | GTTGTTGGTTGTGGTAATTC+TGG | - | chr3.3:89813581-89813600 | MS.gene40340:intron | 40.0% |
| !! | AATGTTAACTTGTGGCCTCA+AGG | + | chr3.3:89815635-89815654 | None:intergenic | 40.0% |
| !! | AGAGTTTTGGTATTAGGCCA+CGG | - | chr3.3:89813318-89813337 | MS.gene40340:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCAAA+GGG | - | chr3.3:89815479-89815498 | MS.gene40340:CDS | 40.0% |
| !! | GATTCTTAACTTGTGCCCTT+TGG | + | chr3.3:89815497-89815516 | None:intergenic | 40.0% |
| !! | GGGAACATTGCTTTTGTAAC+CGG | + | chr3.3:89815885-89815904 | None:intergenic | 40.0% |
| !! | GTCCACCTTTAATTTTGGCA+AGG | + | chr3.3:89814770-89814789 | None:intergenic | 40.0% |
| !! | GTTTCTTAACTTGTGCCTTG+AGG | - | chr3.3:89815617-89815636 | MS.gene40340:CDS | 40.0% |
| !! | TAGTGTTAACTTGTGCCCAA+AGG | - | chr3.3:89815478-89815497 | MS.gene40340:CDS | 40.0% |
| !!! | GGGAAGAAAGTTTTGGTTGT+TGG | - | chr3.3:89813566-89813585 | MS.gene40340:intron | 40.0% |
| !!! | TTTTCCCCCACTGCTTTTTT+TGG | - | chr3.3:89814440-89814459 | MS.gene40340:intron | 40.0% |
| AACAGCTTCTGCATTCTCAC+CGG | + | chr3.3:89813465-89813484 | None:intergenic | 45.0% | |
| ACCCAGAAAAATCATGGGTG+TGG | + | chr3.3:89814357-89814376 | None:intergenic | 45.0% | |
| ACGGTTAAAACGTCACACAG+TGG | - | chr3.3:89815811-89815830 | MS.gene40340:CDS | 45.0% | |
| AGGGTATGTTGGGAAATCTG+AGG | + | chr3.3:89813258-89813277 | None:intergenic | 45.0% | |
| ATTCTCAAGCATGCGCAACA+TGG | - | chr3.3:89814258-89814277 | MS.gene40340:CDS | 45.0% | |
| CAAGAGAAGGAGTAGCATCA+TGG | + | chr3.3:89813634-89813653 | None:intergenic | 45.0% | |
| CACACAGTGGAATTCGTAGA+TGG | - | chr3.3:89815824-89815843 | MS.gene40340:CDS | 45.0% | |
| CAGAAAAATCATGGGTGTGG+TGG | + | chr3.3:89814354-89814373 | None:intergenic | 45.0% | |
| CAGTGGAATTCGTAGATGGA+AGG | - | chr3.3:89815828-89815847 | MS.gene40340:CDS | 45.0% | |
| CTGAGATCTGGTCATGCAAA+TGG | - | chr3.3:89814909-89814928 | MS.gene40340:intron | 45.0% | |
| CTTCAACTCAAGAACCTCTC+CGG | - | chr3.3:89814717-89814736 | MS.gene40340:intron | 45.0% | |
| GATGGCATCATATTGGCAAC+CGG | - | chr3.3:89815863-89815882 | MS.gene40340:CDS | 45.0% | |
| GGGTATGTTGGGAAATCTGA+GGG | + | chr3.3:89813257-89813276 | None:intergenic | 45.0% | |
| GGTATGTTGGGAAATCTGAG+GGG | + | chr3.3:89813256-89813275 | None:intergenic | 45.0% | |
| TGCACTGTCTCATTAAACCG+TGG | + | chr3.3:89813338-89813357 | None:intergenic | 45.0% | |
| TGTCCATGTGGTTACTCAAG+TGG | - | chr3.3:89814595-89814614 | MS.gene40340:intron | 45.0% | |
| TTCCATTGGGACTTGTCGAT+CGG | - | chr3.3:89814619-89814638 | MS.gene40340:intron | 45.0% | |
| TTCTCAAGCATGCGCAACAT+GGG | - | chr3.3:89814259-89814278 | MS.gene40340:CDS | 45.0% | |
| ! | CACCACACCCATGATTTTTC+TGG | - | chr3.3:89814352-89814371 | MS.gene40340:intron | 45.0% |
| ! | GATTTTCCTAGCATCTCTCG+TGG | + | chr3.3:89814564-89814583 | None:intergenic | 45.0% |
| ! | TCGATTGGTCATTGGTGTGT+AGG | - | chr3.3:89815772-89815791 | MS.gene40340:CDS | 45.0% |
| ! | TGTTTTCCCCACATAGAGCA+TGG | - | chr3.3:89814376-89814395 | MS.gene40340:intron | 45.0% |
| ! | TTGGTGACACTGCTCAACTT+GGG | - | chr3.3:89814670-89814689 | MS.gene40340:intron | 45.0% |
| !! | GAGAGGTTCTTGAGTTGAAG+GGG | + | chr3.3:89814717-89814736 | None:intergenic | 45.0% |
| !! | GGAGAGGTTCTTGAGTTGAA+GGG | + | chr3.3:89814718-89814737 | None:intergenic | 45.0% |
| AACCGATCGACAAGTCCCAA+TGG | + | chr3.3:89814624-89814643 | None:intergenic | 50.0% | |
| CTTGCTTTGCATGCACCCAT+AGG | - | chr3.3:89814132-89814151 | MS.gene40340:CDS | 50.0% | |
| GCCTAATGTTGTTGCAGGCT+AGG | + | chr3.3:89814402-89814421 | None:intergenic | 50.0% | |
| GCCTAGCCTGCAACAACATT+AGG | - | chr3.3:89814398-89814417 | MS.gene40340:intron | 50.0% | |
| TCGCGTGTTTGTTCAAGGAC+CGG | - | chr3.3:89813052-89813071 | MS.gene40340:CDS | 50.0% | |
| TGACACTGCTCAACTTGGGT+TGG | - | chr3.3:89814674-89814693 | MS.gene40340:intron | 50.0% | |
| TGGCTGCCTAATGTTGTTGC+AGG | + | chr3.3:89814407-89814426 | None:intergenic | 50.0% | |
| TTCCTAGCATCTCTCGTGGT+AGG | + | chr3.3:89814560-89814579 | None:intergenic | 50.0% | |
| ! | AGACAGGAGTTTTTCCGGAG+AGG | + | chr3.3:89814734-89814753 | None:intergenic | 50.0% |
| ! | AGGGTACCCACATCTAAGAC+AGG | + | chr3.3:89814750-89814769 | None:intergenic | 50.0% |
| ! | CTTGGTGACACTGCTCAACT+TGG | - | chr3.3:89814669-89814688 | MS.gene40340:intron | 50.0% |
| ! | GGGAAAAGGTACGAGGACTT+TGG | + | chr3.3:89814427-89814446 | None:intergenic | 50.0% |
| !! | CAACTTTCGGGTTGTCCATG+TGG | - | chr3.3:89814583-89814602 | MS.gene40340:intron | 50.0% |
| !! | CGGAGAGGTTCTTGAGTTGA+AGG | + | chr3.3:89814719-89814738 | None:intergenic | 50.0% |
| AGGCTAGGCCATGCTCTATG+TGG | + | chr3.3:89814387-89814406 | None:intergenic | 55.0% | |
| AGTTGAAGGGGACCCAAACG+AGG | + | chr3.3:89814705-89814724 | None:intergenic | 55.0% | |
| ATCGTAGGAGCAGGACCTTC+TGG | - | chr3.3:89813077-89813096 | MS.gene40340:intron | 55.0% | |
| CGTCGTCGCGTGTTTGTTCA+AGG | - | chr3.3:89813047-89813066 | MS.gene40340:CDS | 55.0% | |
| GCAGCTGCTGCTAAACCAGA+AGG | + | chr3.3:89813095-89813114 | None:intergenic | 55.0% | |
| GCTAGGCCATGCTCTATGTG+GGG | + | chr3.3:89814385-89814404 | None:intergenic | 55.0% | |
| GGCTAGGCCATGCTCTATGT+GGG | + | chr3.3:89814386-89814405 | None:intergenic | 55.0% | |
| GGGTTGGATCGTCCTCGTTT+GGG | - | chr3.3:89814690-89814709 | MS.gene40340:intron | 55.0% | |
| GTCCTACCACGAGAGATGCT+AGG | - | chr3.3:89814555-89814574 | MS.gene40340:intron | 55.0% | |
| GTTCAAGGACCGGTGATCGT+AGG | - | chr3.3:89813062-89813081 | MS.gene40340:intron | 55.0% | |
| ! | CGTTGGTTGATCGTTGCGAC+CGG | - | chr3.3:89813443-89813462 | MS.gene40340:intron | 55.0% |
| ! | TGGGTTGGATCGTCCTCGTT+TGG | - | chr3.3:89814689-89814708 | MS.gene40340:intron | 55.0% |
| GGTCCTGCTCCTACGATCAC+CGG | + | chr3.3:89813074-89813093 | None:intergenic | 60.0% | |
| ! | GCAGTGGGGGAAAAGGTACG+AGG | + | chr3.3:89814434-89814453 | None:intergenic | 60.0% |
| GGACCGGTGATCGTAGGAGC+AGG | - | chr3.3:89813068-89813087 | MS.gene40340:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89812951 | 89815916 | 89812951 | ID=MS.gene40340 |
| chr3.3 | mRNA | 89812951 | 89815916 | 89812951 | ID=MS.gene40340.t1;Parent=MS.gene40340 |
| chr3.3 | exon | 89815200 | 89815916 | 89815200 | ID=MS.gene40340.t1.exon1;Parent=MS.gene40340.t1 |
| chr3.3 | CDS | 89815200 | 89815916 | 89815200 | ID=cds.MS.gene40340.t1;Parent=MS.gene40340.t1 |
| chr3.3 | exon | 89814070 | 89814318 | 89814070 | ID=MS.gene40340.t1.exon2;Parent=MS.gene40340.t1 |
| chr3.3 | CDS | 89814070 | 89814318 | 89814070 | ID=cds.MS.gene40340.t1;Parent=MS.gene40340.t1 |
| chr3.3 | exon | 89812951 | 89813073 | 89812951 | ID=MS.gene40340.t1.exon3;Parent=MS.gene40340.t1 |
| chr3.3 | CDS | 89812951 | 89813073 | 89812951 | ID=cds.MS.gene40340.t1;Parent=MS.gene40340.t1 |
| Gene Sequence |
| Protein sequence |
