Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050325.t1 | XP_003625811.1 | 99.3 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 3.00E-236 | 827.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050325.t1 | Q9ZW88 | 63.0 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 2.5e-151 | 536.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050325.t1 | G7L632 | 99.3 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 2.1e-236 | 827.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene050325 | -0.805791 | 1.13E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene050327 | 0.993144 | 9.67E-198 | -1.69E-46 |
| MS.gene050325 | MS.gene051858 | -0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene054003 | -0.827265 | 1.72E-54 | -1.69E-46 |
| MS.gene050325 | MS.gene055577 | -0.805313 | 1.42E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene057173 | 0.840849 | 6.79E-58 | -1.69E-46 |
| MS.gene050325 | MS.gene059902 | -0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene061803 | -0.806293 | 8.82E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene063073 | 0.80989 | 1.51E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene064832 | -0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene065540 | -0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene068224 | -0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene07329 | -0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene07524 | -0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene24080 | -0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene24737 | 0.988039 | 1.76E-172 | -1.69E-46 |
| MS.gene050325 | MS.gene29034 | -0.803467 | 3.44E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene30224 | 0.80169 | 8.00E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene30748 | -0.810128 | 1.34E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene33504 | -0.811672 | 6.23E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene35788 | -0.81408 | 1.85E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene36927 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene40958 | -0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene44099 | -0.812525 | 4.06E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene46900 | 0.822903 | 1.85E-53 | -1.69E-46 |
| MS.gene050325 | MS.gene46902 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene050325 | MS.gene47828 | -0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene49263 | 0.813724 | 2.21E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene49329 | -0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene49871 | -0.802205 | 6.26E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene49872 | -0.811696 | 6.15E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene49874 | -0.81543 | 9.28E-52 | -1.69E-46 |
| MS.gene050325 | MS.gene51880 | -0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene050325 | MS.gene52774 | -0.808351 | 3.23E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene57569 | -0.804642 | 1.96E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene59407 | -0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene62848 | -0.800389 | 1.47E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene68722 | 0.81468 | 1.36E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene68965 | -0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene69330 | -0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene71609 | -0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene72784 | -0.819088 | 1.40E-52 | -1.69E-46 |
| MS.gene050325 | MS.gene73493 | -0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene82146 | -0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene050325 | MS.gene82243 | -0.801887 | 7.28E-49 | -1.69E-46 |
| MS.gene050325 | MS.gene83460 | -0.817747 | 2.81E-52 | -1.69E-46 |
| MS.gene050325 | MS.gene88929 | -0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene050325 | MS.gene98166 | -0.801031 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050325.t1 | MTR_7g104490 | 99.284 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 0.0 | 845 |
| MS.gene050325.t1 | MTR_1g060040 | 71.360 | 419 | 120 | 0 | 1 | 419 | 1 | 419 | 0.0 | 589 |
| MS.gene050325.t1 | MTR_4g053260 | 63.723 | 419 | 152 | 0 | 1 | 419 | 2 | 420 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050325.t1 | AT1G67190 | 63.007 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 0.0 | 528 |
| MS.gene050325.t1 | AT1G67190 | 63.007 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 0.0 | 528 |
Find 63 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCTGACATGGCGATTTC+TGG | 0.152383 | 7.2:-8322924 | None:intergenic |
| TTCTCAATGATATTGAAATT+AGG | 0.193329 | 7.2:-8322717 | None:intergenic |
| AATCATGAATTCAGTGAATT+TGG | 0.195737 | 7.2:-8323561 | None:intergenic |
| TCTCAATGATATTGAAATTA+GGG | 0.201362 | 7.2:-8322716 | None:intergenic |
| AGAGCAAATTTCGCGATATA+GGG | 0.320402 | 7.2:-8322526 | None:intergenic |
| CATCCTTAACTTGCAAGAAA+TGG | 0.324453 | 7.2:+8322448 | MS.gene050325:CDS |
| AAAGATGGAGTGCTTCATTA+TGG | 0.324477 | 7.2:+8323359 | MS.gene050325:CDS |
| TAGAGCAAATTTCGCGATAT+AGG | 0.327459 | 7.2:-8322527 | None:intergenic |
| AGTTTGGGTAGCTGGACTTT+TGG | 0.334910 | 7.2:+8323457 | MS.gene050325:CDS |
| CTGTTACCCCTGTCATTGCT+TGG | 0.349306 | 7.2:+8322640 | MS.gene050325:CDS |
| ATGTATTGAATGAAAGAGTT+TGG | 0.353897 | 7.2:-8322494 | None:intergenic |
| ATAGACAAGGTTTCAAGTTT+CGG | 0.358073 | 7.2:-8322894 | None:intergenic |
| TCTCCATTTCTTGCAAGTTA+AGG | 0.360964 | 7.2:-8322451 | None:intergenic |
| ATCTTTCAAGTCATAACTTA+AGG | 0.368328 | 7.2:-8323342 | None:intergenic |
| GCTTAGCAGCTCTTCTTTGA+AGG | 0.394764 | 7.2:+8322962 | MS.gene050325:CDS |
| TTAAGTTATGACTTGAAAGA+TGG | 0.408134 | 7.2:+8323344 | MS.gene050325:CDS |
| CTTGGCTAGCAATCCTATCT+CGG | 0.423380 | 7.2:+8322770 | MS.gene050325:CDS |
| TGTTAGGCGCTGCAATCCTT+TGG | 0.433874 | 7.2:-8322589 | None:intergenic |
| GTATCATATTATCCCATCTT+GGG | 0.437104 | 7.2:+8322403 | MS.gene050325:CDS |
| GTGCTTCATTATGGCTTACA+AGG | 0.443213 | 7.2:+8323368 | MS.gene050325:CDS |
| CGAAATTTGCTCTAGTCACT+TGG | 0.446849 | 7.2:+8322536 | MS.gene050325:CDS |
| ATGATACCGACCACTTCAAC+AGG | 0.448381 | 7.2:-8322387 | None:intergenic |
| AAGGAAAGGTGCGTTAATCT+AGG | 0.450642 | 7.2:-8323323 | None:intergenic |
| TACATAAGCCAAGCAATGAC+AGG | 0.467063 | 7.2:-8322648 | None:intergenic |
| TATCCCATCTTGGGTCTGCT+AGG | 0.472254 | 7.2:+8322412 | MS.gene050325:CDS |
| GGTATCATATTATCCCATCT+TGG | 0.475174 | 7.2:+8322402 | MS.gene050325:CDS |
| ATCCCATCTTGGGTCTGCTA+GGG | 0.476732 | 7.2:+8322413 | MS.gene050325:CDS |
| CATCATCCATGAAAATTGTT+AGG | 0.477751 | 7.2:-8322605 | None:intergenic |
| TCTAGGAAAACAAACAGATA+TGG | 0.480581 | 7.2:-8323306 | None:intergenic |
| TTCGGCTCAACACCCGAGAT+AGG | 0.481385 | 7.2:-8322783 | None:intergenic |
| CATCCCTAGCAGACCCAAGA+TGG | 0.487907 | 7.2:-8322416 | None:intergenic |
| AATGTGGTTGTGTTAGAACT+TGG | 0.510674 | 7.2:+8323407 | MS.gene050325:CDS |
| CAAGGAAATTTATGATACTT+CGG | 0.514673 | 7.2:-8322801 | None:intergenic |
| GTTCGAGTTTGAATATGAGT+AGG | 0.522810 | 7.2:+8323613 | MS.gene050325:CDS |
| GATCAATTCAAAAGCATCAA+AGG | 0.535278 | 7.2:-8323066 | None:intergenic |
| TTGGCTAGCAATCCTATCTC+GGG | 0.539654 | 7.2:+8322771 | MS.gene050325:CDS |
| CTCAATGATATTGAAATTAG+GGG | 0.540853 | 7.2:-8322715 | None:intergenic |
| TGTGTAACTTCATATTTATG+TGG | 0.543217 | 7.2:+8323183 | MS.gene050325:CDS |
| TCAAGTCATAACTTAAGGAA+AGG | 0.545749 | 7.2:-8323337 | None:intergenic |
| TATTATCTCCAATGTCAAGA+TGG | 0.549282 | 7.2:-8323136 | None:intergenic |
| GCAAGAAATGGAGAGAAGCT+TGG | 0.560253 | 7.2:+8322460 | MS.gene050325:CDS |
| AGTGTCATCCATCTTGACAT+TGG | 0.562714 | 7.2:+8323128 | MS.gene050325:CDS |
| TACACACATCTACGATCTCA+AGG | 0.565105 | 7.2:-8323166 | None:intergenic |
| TTTCATTCAATACATCTGAC+TGG | 0.565276 | 7.2:+8322502 | MS.gene050325:CDS |
| AATCGCCATGTCAGATTCAG+AGG | 0.567446 | 7.2:+8322929 | MS.gene050325:CDS |
| ACTGAATTCATGATTCAACT+AGG | 0.580130 | 7.2:+8323569 | MS.gene050325:CDS |
| ATCCCTAGCAGACCCAAGAT+GGG | 0.587597 | 7.2:-8322415 | None:intergenic |
| TGGTTGTGTTAGAACTTGGA+TGG | 0.588684 | 7.2:+8323411 | MS.gene050325:CDS |
| GAGCAAATTTCGCGATATAG+GGG | 0.592223 | 7.2:-8322525 | None:intergenic |
| GGAGGATCTTCCTGTTGAAG+TGG | 0.592625 | 7.2:+8322377 | MS.gene050325:CDS |
| AACGACAGCGACTTCAAGCA+AGG | 0.592920 | 7.2:-8322819 | None:intergenic |
| ATATCATTGAGAAATGCAGC+AGG | 0.597773 | 7.2:+8322727 | MS.gene050325:CDS |
| TTCTGGACAAACAATAGACA+AGG | 0.600718 | 7.2:-8322907 | None:intergenic |
| TGCTTCATTATGGCTTACAA+GGG | 0.605298 | 7.2:+8323369 | MS.gene050325:CDS |
| TGCTTGGCTTATGTATACGA+GGG | 0.608384 | 7.2:+8322656 | MS.gene050325:CDS |
| TATTGAATGAAAGAGTTTGG+AGG | 0.609653 | 7.2:-8322491 | None:intergenic |
| TGATAAACTCATATTAGTGG+CGG | 0.615767 | 7.2:+8323010 | MS.gene050325:CDS |
| ACATAAGCCAAGCAATGACA+GGG | 0.628082 | 7.2:-8322647 | None:intergenic |
| GATCTTCCTGTTGAAGTGGT+CGG | 0.634333 | 7.2:+8322381 | MS.gene050325:CDS |
| TGAAGCCTCTGAATCTGACA+TGG | 0.638655 | 7.2:-8322934 | None:intergenic |
| TTGCTTGGCTTATGTATACG+AGG | 0.648455 | 7.2:+8322655 | MS.gene050325:CDS |
| CGAGATAGGATTGCTAGCCA+AGG | 0.649589 | 7.2:-8322769 | None:intergenic |
| CATAAGCCAAGCAATGACAG+GGG | 0.741525 | 7.2:-8322646 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTCAATGATATTGAAATTA+GGG | - | chr7.2:8322719-8322738 | None:intergenic | 20.0% |
| !! | TTCTCAATGATATTGAAATT+AGG | - | chr7.2:8322720-8322739 | None:intergenic | 20.0% |
| !!! | TTTTGATAAACTCATATTAG+TGG | + | chr7.2:8323007-8323026 | MS.gene050325:CDS | 20.0% |
| ! | AATCATGAATTCAGTGAATT+TGG | - | chr7.2:8323564-8323583 | None:intergenic | 25.0% |
| ! | ATGTATTGAATGAAAGAGTT+TGG | - | chr7.2:8322497-8322516 | None:intergenic | 25.0% |
| ! | ATGTCCTAATCTTAAAAAGA+TGG | + | chr7.2:8323484-8323503 | MS.gene050325:CDS | 25.0% |
| ! | CAAGGAAATTTATGATACTT+CGG | - | chr7.2:8322804-8322823 | None:intergenic | 25.0% |
| ! | CTCAATGATATTGAAATTAG+GGG | - | chr7.2:8322718-8322737 | None:intergenic | 25.0% |
| ! | CTTAAAAAGATGGTCATTTA+TGG | + | chr7.2:8323494-8323513 | MS.gene050325:CDS | 25.0% |
| ! | TGTGTAACTTCATATTTATG+TGG | + | chr7.2:8323183-8323202 | MS.gene050325:CDS | 25.0% |
| ! | TTAAGTTATGACTTGAAAGA+TGG | + | chr7.2:8323344-8323363 | MS.gene050325:CDS | 25.0% |
| !! | ATCTTTCAAGTCATAACTTA+AGG | - | chr7.2:8323345-8323364 | None:intergenic | 25.0% |
| !! | CTTTTGAATTGATCAATAAG+GGG | + | chr7.2:8323075-8323094 | MS.gene050325:CDS | 25.0% |
| !! | GCTTTTGAATTGATCAATAA+GGG | + | chr7.2:8323074-8323093 | MS.gene050325:CDS | 25.0% |
| !! | TGCTTTTGAATTGATCAATA+AGG | + | chr7.2:8323073-8323092 | MS.gene050325:CDS | 25.0% |
| !!! | ATGACCATCTTTTTAAGATT+AGG | - | chr7.2:8323491-8323510 | None:intergenic | 25.0% |
| ACTGAATTCATGATTCAACT+AGG | + | chr7.2:8323569-8323588 | MS.gene050325:CDS | 30.0% | |
| CATCATCCATGAAAATTGTT+AGG | - | chr7.2:8322608-8322627 | None:intergenic | 30.0% | |
| CGTCAAAGTTAAAAAAGCTT+CGG | + | chr7.2:8323234-8323253 | MS.gene050325:CDS | 30.0% | |
| GTATCATATTATCCCATCTT+GGG | + | chr7.2:8322403-8322422 | MS.gene050325:CDS | 30.0% | |
| TATTATCTCCAATGTCAAGA+TGG | - | chr7.2:8323139-8323158 | None:intergenic | 30.0% | |
| TATTGAATGAAAGAGTTTGG+AGG | - | chr7.2:8322494-8322513 | None:intergenic | 30.0% | |
| TCAAGTCATAACTTAAGGAA+AGG | - | chr7.2:8323340-8323359 | None:intergenic | 30.0% | |
| TCTAGGAAAACAAACAGATA+TGG | - | chr7.2:8323309-8323328 | None:intergenic | 30.0% | |
| TGATAAACTCATATTAGTGG+CGG | + | chr7.2:8323010-8323029 | MS.gene050325:CDS | 30.0% | |
| TTTCATTCAATACATCTGAC+TGG | + | chr7.2:8322502-8322521 | MS.gene050325:CDS | 30.0% | |
| !! | ATAGACAAGGTTTCAAGTTT+CGG | - | chr7.2:8322897-8322916 | None:intergenic | 30.0% |
| !! | GATCAATTCAAAAGCATCAA+AGG | - | chr7.2:8323069-8323088 | None:intergenic | 30.0% |
| !!! | TGTACACTTTTTCAAACCAA+AGG | + | chr7.2:8322573-8322592 | MS.gene050325:CDS | 30.0% |
| AATGTGGTTGTGTTAGAACT+TGG | + | chr7.2:8323407-8323426 | MS.gene050325:CDS | 35.0% | |
| AGAGCAAATTTCGCGATATA+GGG | - | chr7.2:8322529-8322548 | None:intergenic | 35.0% | |
| ATATCATTGAGAAATGCAGC+AGG | + | chr7.2:8322727-8322746 | MS.gene050325:CDS | 35.0% | |
| GGTATCATATTATCCCATCT+TGG | + | chr7.2:8322402-8322421 | MS.gene050325:CDS | 35.0% | |
| TAGAGCAAATTTCGCGATAT+AGG | - | chr7.2:8322530-8322549 | None:intergenic | 35.0% | |
| TCTCCATTTCTTGCAAGTTA+AGG | - | chr7.2:8322454-8322473 | None:intergenic | 35.0% | |
| TGCTTCATTATGGCTTACAA+GGG | + | chr7.2:8323369-8323388 | MS.gene050325:CDS | 35.0% | |
| TTCTGGACAAACAATAGACA+AGG | - | chr7.2:8322910-8322929 | None:intergenic | 35.0% | |
| ! | AAAGATGGAGTGCTTCATTA+TGG | + | chr7.2:8323359-8323378 | MS.gene050325:CDS | 35.0% |
| ! | CAGTGATCTTTTCTCAGTTT+GGG | + | chr7.2:8323442-8323461 | MS.gene050325:CDS | 35.0% |
| ! | GTTGTCTTTTCTGATGAATG+TGG | + | chr7.2:8323391-8323410 | MS.gene050325:CDS | 35.0% |
| ! | TCAGTGATCTTTTCTCAGTT+TGG | + | chr7.2:8323441-8323460 | MS.gene050325:CDS | 35.0% |
| !! | CATCCTTAACTTGCAAGAAA+TGG | + | chr7.2:8322448-8322467 | MS.gene050325:CDS | 35.0% |
| ACATAAGCCAAGCAATGACA+GGG | - | chr7.2:8322650-8322669 | None:intergenic | 40.0% | |
| AGTGTCATCCATCTTGACAT+TGG | + | chr7.2:8323128-8323147 | MS.gene050325:CDS | 40.0% | |
| AGTTAAAAAAGCTTCGGCTG+TGG | + | chr7.2:8323240-8323259 | MS.gene050325:CDS | 40.0% | |
| GAAATGCAGCAGGAAAAAGT+TGG | + | chr7.2:8322737-8322756 | MS.gene050325:CDS | 40.0% | |
| GAGCAAATTTCGCGATATAG+GGG | - | chr7.2:8322528-8322547 | None:intergenic | 40.0% | |
| GTGCTTCATTATGGCTTACA+AGG | + | chr7.2:8323368-8323387 | MS.gene050325:CDS | 40.0% | |
| TACACACATCTACGATCTCA+AGG | - | chr7.2:8323169-8323188 | None:intergenic | 40.0% | |
| TACATAAGCCAAGCAATGAC+AGG | - | chr7.2:8322651-8322670 | None:intergenic | 40.0% | |
| TGCTTGGCTTATGTATACGA+GGG | + | chr7.2:8322656-8322675 | MS.gene050325:CDS | 40.0% | |
| TGGTTGTGTTAGAACTTGGA+TGG | + | chr7.2:8323411-8323430 | MS.gene050325:CDS | 40.0% | |
| TTGCTTGGCTTATGTATACG+AGG | + | chr7.2:8322655-8322674 | MS.gene050325:CDS | 40.0% | |
| ! | AAGGAAAGGTGCGTTAATCT+AGG | - | chr7.2:8323326-8323345 | None:intergenic | 40.0% |
| ! | CGAAATTTGCTCTAGTCACT+TGG | + | chr7.2:8322536-8322555 | MS.gene050325:CDS | 40.0% |
| ! | TTTTGTTAGCATCTCAGCGT+TGG | + | chr7.2:8322845-8322864 | MS.gene050325:CDS | 40.0% |
| !! | AAAGTTGGAGGTTTTGACCT+TGG | + | chr7.2:8322752-8322771 | MS.gene050325:CDS | 40.0% |
| AATCGCCATGTCAGATTCAG+AGG | + | chr7.2:8322929-8322948 | MS.gene050325:CDS | 45.0% | |
| ATGATACCGACCACTTCAAC+AGG | - | chr7.2:8322390-8322409 | None:intergenic | 45.0% | |
| ATGCAGCAGGAAAAAGTTGG+AGG | + | chr7.2:8322740-8322759 | MS.gene050325:CDS | 45.0% | |
| CATAAGCCAAGCAATGACAG+GGG | - | chr7.2:8322649-8322668 | None:intergenic | 45.0% | |
| CTTGGCTAGCAATCCTATCT+CGG | + | chr7.2:8322770-8322789 | MS.gene050325:CDS | 45.0% | |
| GAATCTGACATGGCGATTTC+TGG | - | chr7.2:8322927-8322946 | None:intergenic | 45.0% | |
| GATCTTCCTGTTGAAGTGGT+CGG | + | chr7.2:8322381-8322400 | MS.gene050325:CDS | 45.0% | |
| GCAAGAAATGGAGAGAAGCT+TGG | + | chr7.2:8322460-8322479 | MS.gene050325:CDS | 45.0% | |
| GCTTAGCAGCTCTTCTTTGA+AGG | + | chr7.2:8322962-8322981 | MS.gene050325:CDS | 45.0% | |
| TGAAGCCTCTGAATCTGACA+TGG | - | chr7.2:8322937-8322956 | None:intergenic | 45.0% | |
| TTGGCTAGCAATCCTATCTC+GGG | + | chr7.2:8322771-8322790 | MS.gene050325:CDS | 45.0% | |
| ! | AGTTTGGGTAGCTGGACTTT+TGG | + | chr7.2:8323457-8323476 | MS.gene050325:CDS | 45.0% |
| ! | CTTTTCTCAGTTTGGGTAGC+TGG | + | chr7.2:8323449-8323468 | MS.gene050325:CDS | 45.0% |
| ! | GCAGCGCCTAACAATTTTCA+TGG | + | chr7.2:8322599-8322618 | MS.gene050325:CDS | 45.0% |
| !! | TGTTTTTGACGACGAGGATG+AGG | + | chr7.2:8323268-8323287 | MS.gene050325:CDS | 45.0% |
| !!! | GAGTGTTGTTTTTGACGACG+AGG | + | chr7.2:8323262-8323281 | MS.gene050325:CDS | 45.0% |
| AACGACAGCGACTTCAAGCA+AGG | - | chr7.2:8322822-8322841 | None:intergenic | 50.0% | |
| ATCCCATCTTGGGTCTGCTA+GGG | + | chr7.2:8322413-8322432 | MS.gene050325:CDS | 50.0% | |
| ATCCCTAGCAGACCCAAGAT+GGG | - | chr7.2:8322418-8322437 | None:intergenic | 50.0% | |
| CGAGATAGGATTGCTAGCCA+AGG | - | chr7.2:8322772-8322791 | None:intergenic | 50.0% | |
| CTGTTACCCCTGTCATTGCT+TGG | + | chr7.2:8322640-8322659 | MS.gene050325:CDS | 50.0% | |
| GGAGGATCTTCCTGTTGAAG+TGG | + | chr7.2:8322377-8322396 | MS.gene050325:CDS | 50.0% | |
| TATCCCATCTTGGGTCTGCT+AGG | + | chr7.2:8322412-8322431 | MS.gene050325:CDS | 50.0% | |
| ! | TGGGTAGCTGGACTTTTGGA+AGG | + | chr7.2:8323461-8323480 | MS.gene050325:CDS | 50.0% |
| ! | TGTTAGGCGCTGCAATCCTT+TGG | - | chr7.2:8322592-8322611 | None:intergenic | 50.0% |
| CATCCCTAGCAGACCCAAGA+TGG | - | chr7.2:8322419-8322438 | None:intergenic | 55.0% | |
| TTCGGCTCAACACCCGAGAT+AGG | - | chr7.2:8322786-8322805 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 8322375 | 8323634 | 8322375 | ID=MS.gene050325 |
| chr7.2 | mRNA | 8322375 | 8323634 | 8322375 | ID=MS.gene050325.t1;Parent=MS.gene050325 |
| chr7.2 | exon | 8322375 | 8323634 | 8322375 | ID=MS.gene050325.t1.exon1;Parent=MS.gene050325.t1 |
| chr7.2 | CDS | 8322375 | 8323634 | 8322375 | ID=cds.MS.gene050325.t1;Parent=MS.gene050325.t1 |
| Gene Sequence |
| Protein sequence |
