Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050327.t1 | XP_003625811.1 | 99.3 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 3.00E-236 | 827.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050327.t1 | Q9ZW88 | 63.0 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 2.5e-151 | 536.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050327.t1 | G7L632 | 99.3 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 2.1e-236 | 827.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene050327 | -0.811496 | 6.80E-51 | -1.69E-46 |
| MS.gene050325 | MS.gene050327 | 0.993144 | 9.67E-198 | -1.69E-46 |
| MS.gene050327 | MS.gene051858 | -0.81228 | 4.59E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene054003 | -0.819705 | 1.01E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene055577 | -0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene057173 | 0.827595 | 1.43E-54 | -1.69E-46 |
| MS.gene050327 | MS.gene057416 | -0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene059902 | -0.812258 | 4.64E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene061803 | -0.816574 | 5.15E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene063073 | 0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene06332 | -0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene064832 | -0.813418 | 2.59E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene07524 | -0.80295 | 4.40E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene24080 | -0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene24737 | 0.991247 | 1.20E-186 | -1.69E-46 |
| MS.gene050327 | MS.gene29034 | -0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene30224 | 0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene30748 | -0.819496 | 1.13E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene31953 | -0.807147 | 5.82E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene33504 | -0.827111 | 1.87E-54 | -1.69E-46 |
| MS.gene050327 | MS.gene34450 | -0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene35788 | -0.807672 | 4.51E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene36927 | 0.807481 | 4.95E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene40958 | -0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene41718 | -0.80012 | 1.67E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene44099 | -0.806316 | 8.73E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene46900 | 0.819302 | 1.25E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene46902 | 0.814996 | 1.16E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene47828 | -0.830525 | 2.80E-55 | -1.69E-46 |
| MS.gene050327 | MS.gene49263 | 0.82366 | 1.23E-53 | -1.69E-46 |
| MS.gene050327 | MS.gene49329 | -0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene49871 | -0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene49872 | -0.815846 | 7.50E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene49874 | -0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene50596 | -0.800362 | 1.49E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene51878 | -0.803664 | 3.13E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene51880 | -0.816735 | 4.74E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene52774 | -0.822001 | 2.99E-53 | -1.69E-46 |
| MS.gene050327 | MS.gene54881 | -0.803887 | 2.81E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene57318 | -0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene57569 | -0.813978 | 1.95E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene59407 | -0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene62848 | -0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene68722 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene050327 | MS.gene68845 | -0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene68944 | -0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene68965 | -0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene69330 | -0.81062 | 1.05E-50 | -1.69E-46 |
| MS.gene050327 | MS.gene70538 | -0.805987 | 1.02E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene71609 | -0.817898 | 2.60E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene72784 | -0.819897 | 9.13E-53 | -1.69E-46 |
| MS.gene050327 | MS.gene76523 | -0.805521 | 1.28E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene82008 | -0.805028 | 1.63E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene82146 | -0.80375 | 3.00E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene82243 | -0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene83460 | -0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene050327 | MS.gene83516 | -0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene88639 | -0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene050327 | MS.gene88929 | -0.8009 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050327.t1 | MTR_7g104490 | 99.284 | 419 | 3 | 0 | 1 | 419 | 1 | 419 | 0.0 | 845 |
| MS.gene050327.t1 | MTR_1g060040 | 71.360 | 419 | 120 | 0 | 1 | 419 | 1 | 419 | 0.0 | 589 |
| MS.gene050327.t1 | MTR_4g053260 | 63.723 | 419 | 152 | 0 | 1 | 419 | 2 | 420 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050327.t1 | AT1G67190 | 63.007 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 0.0 | 528 |
| MS.gene050327.t1 | AT1G67190 | 63.007 | 419 | 155 | 0 | 1 | 419 | 1 | 419 | 0.0 | 528 |
Find 63 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCTGACATGGCGATTTC+TGG | 0.152383 | 7.2:-8333300 | None:intergenic |
| TTCTCAATGATATTGAAATT+AGG | 0.193329 | 7.2:-8333093 | None:intergenic |
| AATCATGAATTCAGTGAATT+TGG | 0.195737 | 7.2:-8333937 | None:intergenic |
| TCTCAATGATATTGAAATTA+GGG | 0.201362 | 7.2:-8333092 | None:intergenic |
| AGAGCAAATTTCGCGATATA+GGG | 0.320402 | 7.2:-8332902 | None:intergenic |
| CATCCTTAACTTGCAAGAAA+TGG | 0.324453 | 7.2:+8332824 | MS.gene050327:CDS |
| AAAGATGGAGTGCTTCATTA+TGG | 0.324477 | 7.2:+8333735 | MS.gene050327:CDS |
| TAGAGCAAATTTCGCGATAT+AGG | 0.327459 | 7.2:-8332903 | None:intergenic |
| AGTTTGGGTAGCTGGACTTT+TGG | 0.334910 | 7.2:+8333833 | MS.gene050327:CDS |
| CTGTTACCCCTGTCATTGCT+TGG | 0.349306 | 7.2:+8333016 | MS.gene050327:CDS |
| ATGTATTGAATGAAAGAGTT+TGG | 0.353897 | 7.2:-8332870 | None:intergenic |
| ATAGACAAGGTTTCAAGTTT+CGG | 0.358073 | 7.2:-8333270 | None:intergenic |
| TCTCCATTTCTTGCAAGTTA+AGG | 0.360964 | 7.2:-8332827 | None:intergenic |
| ATCTTTCAAGTCATAACTTA+AGG | 0.368328 | 7.2:-8333718 | None:intergenic |
| GCTTAGCAGCTCTTCTTTGA+AGG | 0.394764 | 7.2:+8333338 | MS.gene050327:CDS |
| TTAAGTTATGACTTGAAAGA+TGG | 0.408134 | 7.2:+8333720 | MS.gene050327:CDS |
| CTTGGCTAGCAATCCTATCT+CGG | 0.423380 | 7.2:+8333146 | MS.gene050327:CDS |
| TGTTAGGCGCTGCAATCCTT+TGG | 0.433874 | 7.2:-8332965 | None:intergenic |
| GTATCATATTATCCCATCTT+GGG | 0.437104 | 7.2:+8332779 | MS.gene050327:CDS |
| GTGCTTCATTATGGCTTACA+AGG | 0.443213 | 7.2:+8333744 | MS.gene050327:CDS |
| CGAAATTTGCTCTAGTCACT+TGG | 0.446849 | 7.2:+8332912 | MS.gene050327:CDS |
| ATGATACCGACCACTTCAAC+AGG | 0.448381 | 7.2:-8332763 | None:intergenic |
| AAGGAAAGGTGCGTTAATCT+AGG | 0.450642 | 7.2:-8333699 | None:intergenic |
| TACATAAGCCAAGCAATGAC+AGG | 0.467063 | 7.2:-8333024 | None:intergenic |
| TATCCCATCTTGGGTCTGCT+AGG | 0.472254 | 7.2:+8332788 | MS.gene050327:CDS |
| GGTATCATATTATCCCATCT+TGG | 0.475174 | 7.2:+8332778 | MS.gene050327:CDS |
| ATCCCATCTTGGGTCTGCTA+GGG | 0.476732 | 7.2:+8332789 | MS.gene050327:CDS |
| CATCATCCATGAAAATTGTT+AGG | 0.477751 | 7.2:-8332981 | None:intergenic |
| TCTAGGAAAACAAACAGATA+TGG | 0.480581 | 7.2:-8333682 | None:intergenic |
| TTCGGCTCAACACCCGAGAT+AGG | 0.481385 | 7.2:-8333159 | None:intergenic |
| CATCCCTAGCAGACCCAAGA+TGG | 0.487907 | 7.2:-8332792 | None:intergenic |
| AATGTGGTTGTGTTAGAACT+TGG | 0.510674 | 7.2:+8333783 | MS.gene050327:CDS |
| CAAGGAAATTTATGATACTT+CGG | 0.514673 | 7.2:-8333177 | None:intergenic |
| GTTCGAGTTTGAATATGAGT+AGG | 0.522810 | 7.2:+8333989 | MS.gene050327:CDS |
| GATCAATTCAAAAGCATCAA+AGG | 0.535278 | 7.2:-8333442 | None:intergenic |
| TTGGCTAGCAATCCTATCTC+GGG | 0.539654 | 7.2:+8333147 | MS.gene050327:CDS |
| CTCAATGATATTGAAATTAG+GGG | 0.540853 | 7.2:-8333091 | None:intergenic |
| TGTGTAACTTCATATTTATG+TGG | 0.543217 | 7.2:+8333559 | MS.gene050327:CDS |
| TCAAGTCATAACTTAAGGAA+AGG | 0.545749 | 7.2:-8333713 | None:intergenic |
| TATTATCTCCAATGTCAAGA+TGG | 0.549282 | 7.2:-8333512 | None:intergenic |
| GCAAGAAATGGAGAGAAGCT+TGG | 0.560253 | 7.2:+8332836 | MS.gene050327:CDS |
| AGTGTCATCCATCTTGACAT+TGG | 0.562714 | 7.2:+8333504 | MS.gene050327:CDS |
| TACACACATCTACGATCTCA+AGG | 0.565105 | 7.2:-8333542 | None:intergenic |
| TTTCATTCAATACATCTGAC+TGG | 0.565276 | 7.2:+8332878 | MS.gene050327:CDS |
| AATCGCCATGTCAGATTCAG+AGG | 0.567446 | 7.2:+8333305 | MS.gene050327:CDS |
| ACTGAATTCATGATTCAACT+AGG | 0.580130 | 7.2:+8333945 | MS.gene050327:CDS |
| ATCCCTAGCAGACCCAAGAT+GGG | 0.587597 | 7.2:-8332791 | None:intergenic |
| TGGTTGTGTTAGAACTTGGA+TGG | 0.588684 | 7.2:+8333787 | MS.gene050327:CDS |
| GAGCAAATTTCGCGATATAG+GGG | 0.592223 | 7.2:-8332901 | None:intergenic |
| GGAGGATCTTCCTGTTGAAG+TGG | 0.592625 | 7.2:+8332753 | MS.gene050327:CDS |
| AACGACAGCGACTTCAAGCA+AGG | 0.592920 | 7.2:-8333195 | None:intergenic |
| ATATCATTGAGAAATGCAGC+AGG | 0.597773 | 7.2:+8333103 | MS.gene050327:CDS |
| TTCTGGACAAACAATAGACA+AGG | 0.600718 | 7.2:-8333283 | None:intergenic |
| TGCTTCATTATGGCTTACAA+GGG | 0.605298 | 7.2:+8333745 | MS.gene050327:CDS |
| TGCTTGGCTTATGTATACGA+GGG | 0.608384 | 7.2:+8333032 | MS.gene050327:CDS |
| TATTGAATGAAAGAGTTTGG+AGG | 0.609653 | 7.2:-8332867 | None:intergenic |
| TGATAAACTCATATTAGTGG+CGG | 0.615767 | 7.2:+8333386 | MS.gene050327:CDS |
| ACATAAGCCAAGCAATGACA+GGG | 0.628082 | 7.2:-8333023 | None:intergenic |
| GATCTTCCTGTTGAAGTGGT+CGG | 0.634333 | 7.2:+8332757 | MS.gene050327:CDS |
| TGAAGCCTCTGAATCTGACA+TGG | 0.638655 | 7.2:-8333310 | None:intergenic |
| TTGCTTGGCTTATGTATACG+AGG | 0.648455 | 7.2:+8333031 | MS.gene050327:CDS |
| CGAGATAGGATTGCTAGCCA+AGG | 0.649589 | 7.2:-8333145 | None:intergenic |
| CATAAGCCAAGCAATGACAG+GGG | 0.741525 | 7.2:-8333022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTCAATGATATTGAAATTA+GGG | - | chr7.2:8333095-8333114 | None:intergenic | 20.0% |
| !! | TTCTCAATGATATTGAAATT+AGG | - | chr7.2:8333096-8333115 | None:intergenic | 20.0% |
| !!! | TTTTGATAAACTCATATTAG+TGG | + | chr7.2:8333383-8333402 | MS.gene050327:CDS | 20.0% |
| ! | AATCATGAATTCAGTGAATT+TGG | - | chr7.2:8333940-8333959 | None:intergenic | 25.0% |
| ! | ATGTATTGAATGAAAGAGTT+TGG | - | chr7.2:8332873-8332892 | None:intergenic | 25.0% |
| ! | ATGTCCTAATCTTAAAAAGA+TGG | + | chr7.2:8333860-8333879 | MS.gene050327:CDS | 25.0% |
| ! | CAAGGAAATTTATGATACTT+CGG | - | chr7.2:8333180-8333199 | None:intergenic | 25.0% |
| ! | CTCAATGATATTGAAATTAG+GGG | - | chr7.2:8333094-8333113 | None:intergenic | 25.0% |
| ! | CTTAAAAAGATGGTCATTTA+TGG | + | chr7.2:8333870-8333889 | MS.gene050327:CDS | 25.0% |
| ! | TGTGTAACTTCATATTTATG+TGG | + | chr7.2:8333559-8333578 | MS.gene050327:CDS | 25.0% |
| ! | TTAAGTTATGACTTGAAAGA+TGG | + | chr7.2:8333720-8333739 | MS.gene050327:CDS | 25.0% |
| !! | ATCTTTCAAGTCATAACTTA+AGG | - | chr7.2:8333721-8333740 | None:intergenic | 25.0% |
| !! | CTTTTGAATTGATCAATAAG+GGG | + | chr7.2:8333451-8333470 | MS.gene050327:CDS | 25.0% |
| !! | GCTTTTGAATTGATCAATAA+GGG | + | chr7.2:8333450-8333469 | MS.gene050327:CDS | 25.0% |
| !! | TGCTTTTGAATTGATCAATA+AGG | + | chr7.2:8333449-8333468 | MS.gene050327:CDS | 25.0% |
| !!! | ATGACCATCTTTTTAAGATT+AGG | - | chr7.2:8333867-8333886 | None:intergenic | 25.0% |
| ACTGAATTCATGATTCAACT+AGG | + | chr7.2:8333945-8333964 | MS.gene050327:CDS | 30.0% | |
| CATCATCCATGAAAATTGTT+AGG | - | chr7.2:8332984-8333003 | None:intergenic | 30.0% | |
| CGTCAAAGTTAAAAAAGCTT+CGG | + | chr7.2:8333610-8333629 | MS.gene050327:CDS | 30.0% | |
| GTATCATATTATCCCATCTT+GGG | + | chr7.2:8332779-8332798 | MS.gene050327:CDS | 30.0% | |
| TATTATCTCCAATGTCAAGA+TGG | - | chr7.2:8333515-8333534 | None:intergenic | 30.0% | |
| TATTGAATGAAAGAGTTTGG+AGG | - | chr7.2:8332870-8332889 | None:intergenic | 30.0% | |
| TCAAGTCATAACTTAAGGAA+AGG | - | chr7.2:8333716-8333735 | None:intergenic | 30.0% | |
| TCTAGGAAAACAAACAGATA+TGG | - | chr7.2:8333685-8333704 | None:intergenic | 30.0% | |
| TGATAAACTCATATTAGTGG+CGG | + | chr7.2:8333386-8333405 | MS.gene050327:CDS | 30.0% | |
| TTTCATTCAATACATCTGAC+TGG | + | chr7.2:8332878-8332897 | MS.gene050327:CDS | 30.0% | |
| !! | ATAGACAAGGTTTCAAGTTT+CGG | - | chr7.2:8333273-8333292 | None:intergenic | 30.0% |
| !! | GATCAATTCAAAAGCATCAA+AGG | - | chr7.2:8333445-8333464 | None:intergenic | 30.0% |
| !!! | TGTACACTTTTTCAAACCAA+AGG | + | chr7.2:8332949-8332968 | MS.gene050327:CDS | 30.0% |
| AATGTGGTTGTGTTAGAACT+TGG | + | chr7.2:8333783-8333802 | MS.gene050327:CDS | 35.0% | |
| AGAGCAAATTTCGCGATATA+GGG | - | chr7.2:8332905-8332924 | None:intergenic | 35.0% | |
| ATATCATTGAGAAATGCAGC+AGG | + | chr7.2:8333103-8333122 | MS.gene050327:CDS | 35.0% | |
| GGTATCATATTATCCCATCT+TGG | + | chr7.2:8332778-8332797 | MS.gene050327:CDS | 35.0% | |
| TAGAGCAAATTTCGCGATAT+AGG | - | chr7.2:8332906-8332925 | None:intergenic | 35.0% | |
| TCTCCATTTCTTGCAAGTTA+AGG | - | chr7.2:8332830-8332849 | None:intergenic | 35.0% | |
| TGCTTCATTATGGCTTACAA+GGG | + | chr7.2:8333745-8333764 | MS.gene050327:CDS | 35.0% | |
| TTCTGGACAAACAATAGACA+AGG | - | chr7.2:8333286-8333305 | None:intergenic | 35.0% | |
| ! | AAAGATGGAGTGCTTCATTA+TGG | + | chr7.2:8333735-8333754 | MS.gene050327:CDS | 35.0% |
| ! | CAGTGATCTTTTCTCAGTTT+GGG | + | chr7.2:8333818-8333837 | MS.gene050327:CDS | 35.0% |
| ! | GTTGTCTTTTCTGATGAATG+TGG | + | chr7.2:8333767-8333786 | MS.gene050327:CDS | 35.0% |
| ! | TCAGTGATCTTTTCTCAGTT+TGG | + | chr7.2:8333817-8333836 | MS.gene050327:CDS | 35.0% |
| !! | CATCCTTAACTTGCAAGAAA+TGG | + | chr7.2:8332824-8332843 | MS.gene050327:CDS | 35.0% |
| ACATAAGCCAAGCAATGACA+GGG | - | chr7.2:8333026-8333045 | None:intergenic | 40.0% | |
| AGTGTCATCCATCTTGACAT+TGG | + | chr7.2:8333504-8333523 | MS.gene050327:CDS | 40.0% | |
| AGTTAAAAAAGCTTCGGCTG+TGG | + | chr7.2:8333616-8333635 | MS.gene050327:CDS | 40.0% | |
| GAAATGCAGCAGGAAAAAGT+TGG | + | chr7.2:8333113-8333132 | MS.gene050327:CDS | 40.0% | |
| GAGCAAATTTCGCGATATAG+GGG | - | chr7.2:8332904-8332923 | None:intergenic | 40.0% | |
| GTGCTTCATTATGGCTTACA+AGG | + | chr7.2:8333744-8333763 | MS.gene050327:CDS | 40.0% | |
| TACACACATCTACGATCTCA+AGG | - | chr7.2:8333545-8333564 | None:intergenic | 40.0% | |
| TACATAAGCCAAGCAATGAC+AGG | - | chr7.2:8333027-8333046 | None:intergenic | 40.0% | |
| TGCTTGGCTTATGTATACGA+GGG | + | chr7.2:8333032-8333051 | MS.gene050327:CDS | 40.0% | |
| TGGTTGTGTTAGAACTTGGA+TGG | + | chr7.2:8333787-8333806 | MS.gene050327:CDS | 40.0% | |
| TTGCTTGGCTTATGTATACG+AGG | + | chr7.2:8333031-8333050 | MS.gene050327:CDS | 40.0% | |
| ! | AAGGAAAGGTGCGTTAATCT+AGG | - | chr7.2:8333702-8333721 | None:intergenic | 40.0% |
| ! | CGAAATTTGCTCTAGTCACT+TGG | + | chr7.2:8332912-8332931 | MS.gene050327:CDS | 40.0% |
| ! | TTTTGTTAGCATCTCAGCGT+TGG | + | chr7.2:8333221-8333240 | MS.gene050327:CDS | 40.0% |
| !! | AAAGTTGGAGGTTTTGACCT+TGG | + | chr7.2:8333128-8333147 | MS.gene050327:CDS | 40.0% |
| AATCGCCATGTCAGATTCAG+AGG | + | chr7.2:8333305-8333324 | MS.gene050327:CDS | 45.0% | |
| ATGATACCGACCACTTCAAC+AGG | - | chr7.2:8332766-8332785 | None:intergenic | 45.0% | |
| ATGCAGCAGGAAAAAGTTGG+AGG | + | chr7.2:8333116-8333135 | MS.gene050327:CDS | 45.0% | |
| CATAAGCCAAGCAATGACAG+GGG | - | chr7.2:8333025-8333044 | None:intergenic | 45.0% | |
| CTTGGCTAGCAATCCTATCT+CGG | + | chr7.2:8333146-8333165 | MS.gene050327:CDS | 45.0% | |
| GAATCTGACATGGCGATTTC+TGG | - | chr7.2:8333303-8333322 | None:intergenic | 45.0% | |
| GATCTTCCTGTTGAAGTGGT+CGG | + | chr7.2:8332757-8332776 | MS.gene050327:CDS | 45.0% | |
| GCAAGAAATGGAGAGAAGCT+TGG | + | chr7.2:8332836-8332855 | MS.gene050327:CDS | 45.0% | |
| GCTTAGCAGCTCTTCTTTGA+AGG | + | chr7.2:8333338-8333357 | MS.gene050327:CDS | 45.0% | |
| TGAAGCCTCTGAATCTGACA+TGG | - | chr7.2:8333313-8333332 | None:intergenic | 45.0% | |
| TTGGCTAGCAATCCTATCTC+GGG | + | chr7.2:8333147-8333166 | MS.gene050327:CDS | 45.0% | |
| ! | AGTTTGGGTAGCTGGACTTT+TGG | + | chr7.2:8333833-8333852 | MS.gene050327:CDS | 45.0% |
| ! | CTTTTCTCAGTTTGGGTAGC+TGG | + | chr7.2:8333825-8333844 | MS.gene050327:CDS | 45.0% |
| ! | GCAGCGCCTAACAATTTTCA+TGG | + | chr7.2:8332975-8332994 | MS.gene050327:CDS | 45.0% |
| !! | TGTTTTTGACGACGAGGATG+AGG | + | chr7.2:8333644-8333663 | MS.gene050327:CDS | 45.0% |
| !!! | GAGTGTTGTTTTTGACGACG+AGG | + | chr7.2:8333638-8333657 | MS.gene050327:CDS | 45.0% |
| AACGACAGCGACTTCAAGCA+AGG | - | chr7.2:8333198-8333217 | None:intergenic | 50.0% | |
| ATCCCATCTTGGGTCTGCTA+GGG | + | chr7.2:8332789-8332808 | MS.gene050327:CDS | 50.0% | |
| ATCCCTAGCAGACCCAAGAT+GGG | - | chr7.2:8332794-8332813 | None:intergenic | 50.0% | |
| CGAGATAGGATTGCTAGCCA+AGG | - | chr7.2:8333148-8333167 | None:intergenic | 50.0% | |
| CTGTTACCCCTGTCATTGCT+TGG | + | chr7.2:8333016-8333035 | MS.gene050327:CDS | 50.0% | |
| GGAGGATCTTCCTGTTGAAG+TGG | + | chr7.2:8332753-8332772 | MS.gene050327:CDS | 50.0% | |
| TATCCCATCTTGGGTCTGCT+AGG | + | chr7.2:8332788-8332807 | MS.gene050327:CDS | 50.0% | |
| ! | TGGGTAGCTGGACTTTTGGA+AGG | + | chr7.2:8333837-8333856 | MS.gene050327:CDS | 50.0% |
| ! | TGTTAGGCGCTGCAATCCTT+TGG | - | chr7.2:8332968-8332987 | None:intergenic | 50.0% |
| CATCCCTAGCAGACCCAAGA+TGG | - | chr7.2:8332795-8332814 | None:intergenic | 55.0% | |
| TTCGGCTCAACACCCGAGAT+AGG | - | chr7.2:8333162-8333181 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 8332751 | 8334010 | 8332751 | ID=MS.gene050327 |
| chr7.2 | mRNA | 8332751 | 8334010 | 8332751 | ID=MS.gene050327.t1;Parent=MS.gene050327 |
| chr7.2 | exon | 8332751 | 8334010 | 8332751 | ID=MS.gene050327.t1.exon1;Parent=MS.gene050327.t1 |
| chr7.2 | CDS | 8332751 | 8334010 | 8332751 | ID=cds.MS.gene050327.t1;Parent=MS.gene050327.t1 |
| Gene Sequence |
| Protein sequence |
