Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49872.t1 | XP_024638801.1 | 97.8 | 278 | 6 | 0 | 1 | 278 | 1 | 278 | 5.20E-160 | 573.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49872.t1 | Q9SRM5 | 63.3 | 256 | 94 | 0 | 1 | 256 | 1 | 256 | 1.2e-96 | 354.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49872.t1 | G7JP31 | 97.8 | 271 | 6 | 0 | 1 | 271 | 1 | 271 | 9.5e-156 | 558.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene49872 | 0.858569 | 7.53E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene49872 | 0.885393 | 8.46E-72 | -1.69E-46 |
| MS.gene049173 | MS.gene49872 | 0.800469 | 1.42E-48 | -1.69E-46 |
| MS.gene049217 | MS.gene49872 | 0.864284 | 1.36E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene49872 | 0.899999 | 1.14E-77 | -1.69E-46 |
| MS.gene049232 | MS.gene49872 | 0.838455 | 2.85E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene49872 | 0.877438 | 6.29E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene49872 | 0.871696 | 5.62E-67 | -1.69E-46 |
| MS.gene049396 | MS.gene49872 | 0.839156 | 1.88E-57 | -1.69E-46 |
| MS.gene049427 | MS.gene49872 | 0.833624 | 4.79E-56 | -1.69E-46 |
| MS.gene049488 | MS.gene49872 | 0.81444 | 1.54E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene49872 | 0.905069 | 6.33E-80 | -1.69E-46 |
| MS.gene049633 | MS.gene49872 | 0.885544 | 7.42E-72 | -1.69E-46 |
| MS.gene049794 | MS.gene49872 | 0.812237 | 4.69E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene49872 | 0.875275 | 3.50E-68 | -1.69E-46 |
| MS.gene05010 | MS.gene49872 | 0.839459 | 1.56E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene49872 | 0.835676 | 1.46E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene49872 | 0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene49872 | 0.853329 | 2.57E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene49872 | 0.841191 | 5.52E-58 | -1.69E-46 |
| MS.gene050325 | MS.gene49872 | -0.811696 | 6.15E-51 | -1.69E-46 |
| MS.gene050327 | MS.gene49872 | -0.815846 | 7.50E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene49872 | 0.80985 | 1.54E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene49872 | -0.801351 | 9.38E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene49872 | -0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene49872 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene49872 | 0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene49872 | 0.86663 | 2.48E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene49872 | 0.846987 | 1.54E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene49872 | 0.882834 | 7.47E-71 | -1.69E-46 |
| MS.gene050547 | MS.gene49872 | -0.806419 | 8.30E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene49872 | 0.875625 | 2.66E-68 | -1.69E-46 |
| MS.gene050593 | MS.gene49872 | 0.885748 | 6.22E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene49872 | 0.85629 | 3.56E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene49872 | -0.807775 | 4.29E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene49872 | 0.816378 | 5.70E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene49872 | 0.828971 | 6.68E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene49872 | 0.852344 | 4.91E-61 | -1.69E-46 |
| MS.gene050690 | MS.gene49872 | 0.829833 | 4.13E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene49872 | 0.867315 | 1.50E-65 | -1.69E-46 |
| MS.gene050747 | MS.gene49872 | 0.923021 | 4.59E-89 | -1.69E-46 |
| MS.gene050772 | MS.gene49872 | 0.899244 | 2.40E-77 | -1.69E-46 |
| MS.gene05080 | MS.gene49872 | 0.899141 | 2.66E-77 | -1.69E-46 |
| MS.gene05081 | MS.gene49872 | 0.872676 | 2.65E-67 | -1.69E-46 |
| MS.gene050868 | MS.gene49872 | 0.878167 | 3.49E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene49872 | 0.879834 | 9.01E-70 | -1.69E-46 |
| MS.gene050904 | MS.gene49872 | 0.803252 | 3.81E-49 | -1.69E-46 |
| MS.gene050937 | MS.gene49872 | -0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene49872 | 0.924509 | 6.41E-90 | -1.69E-46 |
| MS.gene050986 | MS.gene49872 | 0.844383 | 7.82E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene49872 | 0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene49872 | -0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene49872 | 0.83884 | 2.26E-57 | -1.69E-46 |
| MS.gene051167 | MS.gene49872 | -0.837495 | 5.03E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene49872 | 0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene49872 | 0.817699 | 2.88E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene49872 | 0.862512 | 4.81E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene49872 | 0.837825 | 4.14E-57 | -1.69E-46 |
| MS.gene051617 | MS.gene49872 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene49872 | 0.873441 | 1.47E-67 | -1.69E-46 |
| MS.gene051694 | MS.gene49872 | 0.849825 | 2.52E-60 | -1.69E-46 |
| MS.gene051734 | MS.gene49872 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene49872 | 0.834034 | 3.78E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene49872 | 0.90899 | 9.34E-82 | -1.69E-46 |
| MS.gene051858 | MS.gene49872 | 0.842729 | 2.16E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene49872 | 0.822255 | 2.61E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene49872 | 0.805482 | 1.31E-49 | -1.69E-46 |
| MS.gene052015 | MS.gene49872 | -0.810294 | 1.24E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene49872 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene49872 | 0.810356 | 1.20E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene49872 | 0.889082 | 3.33E-73 | -1.69E-46 |
| MS.gene052346 | MS.gene49872 | 0.843983 | 1.00E-58 | -1.69E-46 |
| MS.gene05234 | MS.gene49872 | -0.80019 | 1.62E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene49872 | 0.834893 | 2.30E-56 | -1.69E-46 |
| MS.gene05240 | MS.gene49872 | -0.815416 | 9.35E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene49872 | 0.829465 | 5.07E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene49872 | 0.841951 | 3.48E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene49872 | 0.840155 | 1.03E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene49872 | 0.838281 | 3.16E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene49872 | 0.840069 | 1.09E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene49872 | 0.844583 | 6.91E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene49872 | 0.881713 | 1.91E-70 | -1.69E-46 |
| MS.gene052503 | MS.gene49872 | 0.903643 | 2.81E-79 | -1.69E-46 |
| MS.gene052504 | MS.gene49872 | 0.80022 | 1.60E-48 | -1.69E-46 |
| MS.gene052505 | MS.gene49872 | 0.885825 | 5.82E-72 | -1.69E-46 |
| MS.gene052506 | MS.gene49872 | 0.870386 | 1.52E-66 | -1.69E-46 |
| MS.gene052615 | MS.gene49872 | 0.906061 | 2.22E-80 | -1.69E-46 |
| MS.gene052820 | MS.gene49872 | 0.824823 | 6.55E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene49872 | 0.865209 | 6.97E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene49872 | 0.895928 | 6.01E-76 | -1.69E-46 |
| MS.gene052825 | MS.gene49872 | 0.895936 | 5.96E-76 | -1.69E-46 |
| MS.gene052870 | MS.gene49872 | 0.837418 | 5.26E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene49872 | 0.849957 | 2.32E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene49872 | 0.800381 | 1.48E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene49872 | 0.854659 | 1.06E-61 | -1.69E-46 |
| MS.gene052982 | MS.gene49872 | 0.861408 | 1.05E-63 | -1.69E-46 |
| MS.gene052986 | MS.gene49872 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene052987 | MS.gene49872 | 0.80594 | 1.05E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene49872 | 0.820715 | 5.92E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene49872 | 0.853103 | 2.98E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene49872 | 0.819035 | 1.43E-52 | -1.69E-46 |
| MS.gene053117 | MS.gene49872 | 0.810285 | 1.24E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene49872 | 0.903695 | 2.66E-79 | -1.69E-46 |
| MS.gene053207 | MS.gene49872 | 0.893434 | 6.31E-75 | -1.69E-46 |
| MS.gene053213 | MS.gene49872 | 0.896708 | 2.84E-76 | -1.69E-46 |
| MS.gene053286 | MS.gene49872 | 0.893914 | 4.03E-75 | -1.69E-46 |
| MS.gene053322 | MS.gene49872 | 0.821603 | 3.70E-53 | -1.69E-46 |
| MS.gene053421 | MS.gene49872 | -0.81636 | 5.76E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene49872 | 0.880921 | 3.69E-70 | -1.69E-46 |
| MS.gene053449 | MS.gene49872 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene49872 | 0.863276 | 2.80E-64 | -1.69E-46 |
| MS.gene053480 | MS.gene49872 | 0.861967 | 7.07E-64 | -1.69E-46 |
| MS.gene053574 | MS.gene49872 | 0.916108 | 2.65E-85 | -1.69E-46 |
| MS.gene053579 | MS.gene49872 | 0.836029 | 1.19E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene49872 | 0.880873 | 3.83E-70 | -1.69E-46 |
| MS.gene053632 | MS.gene49872 | 0.880809 | 4.04E-70 | -1.69E-46 |
| MS.gene053824 | MS.gene49872 | 0.872126 | 4.04E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene49872 | 0.842308 | 2.80E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene49872 | 0.838731 | 2.42E-57 | -1.69E-46 |
| MS.gene054003 | MS.gene49872 | 0.886488 | 3.28E-72 | -1.69E-46 |
| MS.gene054408 | MS.gene49872 | 0.879694 | 1.01E-69 | -1.69E-46 |
| MS.gene054595 | MS.gene49872 | 0.8712 | 8.19E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene49872 | 0.876658 | 1.17E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene49872 | 0.883683 | 3.65E-71 | -1.69E-46 |
| MS.gene054706 | MS.gene49872 | -0.84686 | 1.67E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene49872 | -0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene49872 | 0.869127 | 3.91E-66 | -1.69E-46 |
| MS.gene054742 | MS.gene49872 | -0.829213 | 5.84E-55 | -1.69E-46 |
| MS.gene054884 | MS.gene49872 | -0.842546 | 2.42E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene49872 | 0.893726 | 4.81E-75 | -1.69E-46 |
| MS.gene05494 | MS.gene49872 | 0.830168 | 3.42E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene49872 | 0.859593 | 3.71E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene49872 | 0.860167 | 2.49E-63 | -1.69E-46 |
| MS.gene055206 | MS.gene49872 | 0.877913 | 4.29E-69 | -1.69E-46 |
| MS.gene055212 | MS.gene49872 | 0.8143 | 1.65E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene49872 | 0.840066 | 1.09E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene49872 | 0.892802 | 1.13E-74 | -1.69E-46 |
| MS.gene055362 | MS.gene49872 | 0.870836 | 1.08E-66 | -1.69E-46 |
| MS.gene055486 | MS.gene49872 | 0.845558 | 3.77E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene49872 | 0.89121 | 4.89E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene49872 | 0.894571 | 2.18E-75 | -1.69E-46 |
| MS.gene055629 | MS.gene49872 | 0.834309 | 3.23E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene49872 | 0.811203 | 7.87E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene49872 | 0.86855 | 6.01E-66 | -1.69E-46 |
| MS.gene055741 | MS.gene49872 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene49872 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene49872 | 0.837019 | 6.65E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene49872 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene49872 | 0.819894 | 9.14E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene49872 | 0.8664 | 2.93E-65 | -1.69E-46 |
| MS.gene055909 | MS.gene49872 | 0.820388 | 7.04E-53 | -1.69E-46 |
| MS.gene055911 | MS.gene49872 | 0.816033 | 6.81E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene49872 | 0.829305 | 5.54E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene49872 | 0.864512 | 1.15E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene49872 | 0.859593 | 3.72E-63 | -1.69E-46 |
| MS.gene056046 | MS.gene49872 | 0.825143 | 5.51E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene49872 | 0.853486 | 2.31E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene49872 | 0.89163 | 3.33E-74 | -1.69E-46 |
| MS.gene056374 | MS.gene49872 | 0.848624 | 5.44E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene49872 | 0.821104 | 4.82E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene49872 | 0.807916 | 4.00E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene49872 | 0.811312 | 7.46E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene49872 | 0.846117 | 2.66E-59 | -1.69E-46 |
| MS.gene056448 | MS.gene49872 | 0.853809 | 1.87E-61 | -1.69E-46 |
| MS.gene056487 | MS.gene49872 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene49872 | 0.862588 | 4.56E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene49872 | 0.867703 | 1.13E-65 | -1.69E-46 |
| MS.gene056511 | MS.gene49872 | 0.863559 | 2.28E-64 | -1.69E-46 |
| MS.gene056590 | MS.gene49872 | -0.812245 | 4.67E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene49872 | -0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene49872 | 0.844145 | 9.06E-59 | -1.69E-46 |
| MS.gene05664 | MS.gene49872 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene49872 | 0.872195 | 3.83E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene49872 | 0.840634 | 7.73E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene49872 | 0.848353 | 6.47E-60 | -1.69E-46 |
| MS.gene056782 | MS.gene49872 | 0.806419 | 8.30E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene49872 | 0.829725 | 4.38E-55 | -1.69E-46 |
| MS.gene056897 | MS.gene49872 | 0.816198 | 6.26E-52 | -1.69E-46 |
| MS.gene056898 | MS.gene49872 | 0.806387 | 8.43E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene49872 | 0.836007 | 1.20E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene49872 | 0.825241 | 5.22E-54 | -1.69E-46 |
| MS.gene057048 | MS.gene49872 | 0.819349 | 1.22E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene49872 | 0.887494 | 1.36E-72 | -1.69E-46 |
| MS.gene057086 | MS.gene49872 | 0.82612 | 3.23E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene49872 | 0.833719 | 4.54E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene49872 | 0.845526 | 3.84E-59 | -1.69E-46 |
| MS.gene057196 | MS.gene49872 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene49872 | -0.813157 | 2.95E-51 | -1.69E-46 |
| MS.gene057310 | MS.gene49872 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene49872 | 0.860388 | 2.14E-63 | -1.69E-46 |
| MS.gene057332 | MS.gene49872 | 0.821051 | 4.96E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene49872 | 0.889123 | 3.21E-73 | -1.69E-46 |
| MS.gene057658 | MS.gene49872 | 0.880704 | 4.41E-70 | -1.69E-46 |
| MS.gene057734 | MS.gene49872 | 0.864265 | 1.38E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene49872 | 0.876631 | 1.20E-68 | -1.69E-46 |
| MS.gene057856 | MS.gene49872 | 0.859887 | 3.03E-63 | -1.69E-46 |
| MS.gene057857 | MS.gene49872 | 0.817791 | 2.75E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene49872 | 0.849115 | 3.98E-60 | -1.69E-46 |
| MS.gene058007 | MS.gene49872 | 0.800118 | 1.67E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene49872 | 0.82388 | 1.09E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene49872 | 0.89482 | 1.72E-75 | -1.69E-46 |
| MS.gene058157 | MS.gene49872 | 0.842744 | 2.14E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene49872 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene49872 | -0.809446 | 1.88E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene49872 | 0.858015 | 1.10E-62 | -1.69E-46 |
| MS.gene058376 | MS.gene49872 | 0.827342 | 1.65E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene49872 | 0.895735 | 7.23E-76 | -1.69E-46 |
| MS.gene058419 | MS.gene49872 | 0.885583 | 7.18E-72 | -1.69E-46 |
| MS.gene058444 | MS.gene49872 | 0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene49872 | 0.911633 | 4.87E-83 | -1.69E-46 |
| MS.gene058700 | MS.gene49872 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene49872 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene49872 | 0.867818 | 1.03E-65 | -1.69E-46 |
| MS.gene058838 | MS.gene49872 | 0.883726 | 3.51E-71 | -1.69E-46 |
| MS.gene05883 | MS.gene49872 | 0.87699 | 9.00E-69 | -1.69E-46 |
| MS.gene059022 | MS.gene49872 | 0.857381 | 1.70E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene49872 | 0.898566 | 4.68E-77 | -1.69E-46 |
| MS.gene059029 | MS.gene49872 | 0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene49872 | 0.823062 | 1.70E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene49872 | 0.852121 | 5.68E-61 | -1.69E-46 |
| MS.gene059181 | MS.gene49872 | 0.806794 | 6.92E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene49872 | -0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene49872 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene49872 | 0.866619 | 2.50E-65 | -1.69E-46 |
| MS.gene059367 | MS.gene49872 | 0.835021 | 2.14E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene49872 | 0.810311 | 1.23E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene49872 | 0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene49872 | 0.848575 | 5.62E-60 | -1.69E-46 |
| MS.gene059667 | MS.gene49872 | 0.865779 | 4.61E-65 | -1.69E-46 |
| MS.gene059677 | MS.gene49872 | 0.8649 | 8.71E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene49872 | 0.812308 | 4.53E-51 | -1.69E-46 |
| MS.gene059699 | MS.gene49872 | -0.824586 | 7.45E-54 | -1.69E-46 |
| MS.gene059703 | MS.gene49872 | -0.820377 | 7.08E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene49872 | 0.805311 | 1.42E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene49872 | 0.900978 | 4.26E-78 | -1.69E-46 |
| MS.gene059756 | MS.gene49872 | 0.843009 | 1.82E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene49872 | 0.838242 | 3.23E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene49872 | 0.862064 | 6.60E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene49872 | 0.843544 | 1.31E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene49872 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene49872 | 0.831271 | 1.83E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene49872 | -0.815636 | 8.35E-52 | -1.69E-46 |
| MS.gene06027 | MS.gene49872 | 0.816605 | 5.07E-52 | -1.69E-46 |
| MS.gene060295 | MS.gene49872 | 0.8017 | 7.96E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene49872 | 0.812872 | 3.41E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene49872 | 0.857705 | 1.36E-62 | -1.69E-46 |
| MS.gene060485 | MS.gene49872 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene49872 | 0.806258 | 8.98E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene49872 | 0.875811 | 2.29E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene49872 | 0.831307 | 1.80E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene49872 | 0.865012 | 8.04E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene49872 | 0.856031 | 4.23E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene49872 | 0.824338 | 8.52E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene49872 | 0.876948 | 9.30E-69 | -1.69E-46 |
| MS.gene060837 | MS.gene49872 | 0.860761 | 1.65E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene49872 | 0.908648 | 1.36E-81 | -1.69E-46 |
| MS.gene06097 | MS.gene49872 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene49872 | 0.871675 | 5.71E-67 | -1.69E-46 |
| MS.gene061041 | MS.gene49872 | 0.81311 | 3.02E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene49872 | 0.866769 | 2.24E-65 | -1.69E-46 |
| MS.gene061200 | MS.gene49872 | 0.80946 | 1.87E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49872.t1 | MTR_4g016510 | 97.786 | 271 | 6 | 0 | 1 | 271 | 1 | 271 | 0.0 | 552 |
| MS.gene49872.t1 | MTR_7g068530 | 72.656 | 256 | 67 | 3 | 1 | 256 | 1 | 253 | 8.18e-137 | 386 |
| MS.gene49872.t1 | MTR_3g070460 | 66.406 | 256 | 86 | 0 | 1 | 256 | 1 | 256 | 6.71e-128 | 364 |
| MS.gene49872.t1 | MTR_7g068460 | 67.729 | 251 | 79 | 2 | 5 | 255 | 32 | 280 | 5.13e-127 | 362 |
| MS.gene49872.t1 | MTR_7g068550 | 64.062 | 256 | 90 | 1 | 1 | 256 | 1 | 254 | 1.01e-126 | 361 |
| MS.gene49872.t1 | MTR_7g068500 | 68.000 | 250 | 78 | 2 | 6 | 255 | 32 | 279 | 2.60e-125 | 358 |
| MS.gene49872.t1 | MTR_7g068470 | 66.932 | 251 | 80 | 3 | 5 | 255 | 1 | 248 | 1.34e-121 | 348 |
| MS.gene49872.t1 | MTR_7g068470 | 65.737 | 251 | 79 | 4 | 5 | 255 | 1 | 244 | 3.41e-117 | 336 |
| MS.gene49872.t1 | MTR_7g068450 | 57.422 | 256 | 104 | 3 | 5 | 256 | 1 | 255 | 9.85e-103 | 300 |
| MS.gene49872.t1 | MTR_4g016500 | 66.393 | 244 | 11 | 4 | 35 | 278 | 277 | 449 | 1.14e-99 | 299 |
| MS.gene49872.t1 | MTR_2g015500 | 37.712 | 236 | 135 | 4 | 6 | 233 | 4 | 235 | 1.43e-51 | 169 |
| MS.gene49872.t1 | MTR_2g015510 | 39.048 | 210 | 122 | 3 | 6 | 209 | 5 | 214 | 2.36e-49 | 164 |
| MS.gene49872.t1 | MTR_7g068520 | 39.442 | 251 | 53 | 4 | 5 | 255 | 2 | 153 | 1.66e-47 | 155 |
| MS.gene49872.t1 | MTR_4g105680 | 34.272 | 213 | 130 | 4 | 26 | 232 | 49 | 257 | 5.92e-33 | 122 |
| MS.gene49872.t1 | MTR_2g015480 | 31.220 | 205 | 114 | 5 | 15 | 209 | 66 | 253 | 1.60e-25 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49872.t1 | AT3G11210 | 63.281 | 256 | 94 | 0 | 1 | 256 | 1 | 256 | 1.93e-123 | 353 |
| MS.gene49872.t1 | AT2G38180 | 60.938 | 256 | 89 | 4 | 1 | 254 | 1 | 247 | 3.03e-109 | 319 |
| MS.gene49872.t1 | AT5G62930 | 37.768 | 233 | 136 | 2 | 5 | 232 | 1 | 229 | 6.32e-55 | 178 |
| MS.gene49872.t1 | AT5G62930 | 37.768 | 233 | 136 | 2 | 5 | 232 | 27 | 255 | 1.90e-54 | 177 |
| MS.gene49872.t1 | AT5G45920 | 40.952 | 210 | 119 | 3 | 5 | 209 | 2 | 211 | 1.20e-53 | 174 |
| MS.gene49872.t1 | AT5G45920 | 40.952 | 210 | 119 | 3 | 5 | 209 | 2 | 211 | 1.20e-53 | 174 |
| MS.gene49872.t1 | AT5G45920 | 40.323 | 186 | 106 | 3 | 5 | 185 | 2 | 187 | 1.72e-45 | 152 |
| MS.gene49872.t1 | AT5G45920 | 40.323 | 186 | 106 | 3 | 5 | 185 | 2 | 187 | 1.72e-45 | 152 |
| MS.gene49872.t1 | AT5G62930 | 33.136 | 169 | 104 | 2 | 69 | 232 | 7 | 171 | 1.61e-29 | 110 |
Find 65 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCATTCAAAATGTTTC+TGG | 0.167567 | 4.2:+81174497 | None:intergenic |
| AACACAATTTGAGGCCTTAT+TGG | 0.242625 | 4.2:+81177616 | None:intergenic |
| GAATTCAAGGCGTGCTGTTC+AGG | 0.251854 | 4.2:-81176794 | MS.gene49872:CDS |
| GACTTAAAGCAGTAATATAT+TGG | 0.251971 | 4.2:-81175090 | MS.gene49872:intron |
| CACAAATTCACGAAACATTC+AGG | 0.270335 | 4.2:-81175826 | MS.gene49872:intron |
| GAATCTTCTGCAAACTCATT+TGG | 0.330143 | 4.2:+81174580 | None:intergenic |
| TGACAGCTGATTCTTCAAAT+TGG | 0.333543 | 4.2:+81174437 | None:intergenic |
| GAAGATTATTATCCATCTTA+AGG | 0.337002 | 4.2:-81175979 | MS.gene49872:intron |
| ACTATATTCAGAAGCATGTT+TGG | 0.339649 | 4.2:-81175036 | MS.gene49872:CDS |
| GATTCATTTGTCCTCTTTAG+TGG | 0.350705 | 4.2:+81175065 | None:intergenic |
| AGGCCTCAAATTGTGTTGTT+TGG | 0.353098 | 4.2:-81177610 | MS.gene49872:CDS |
| TAGTTATAGTGATGAAGGTT+GGG | 0.383224 | 4.2:-81177569 | MS.gene49872:CDS |
| AAGGCGTGCTGTTCAGGTTC+TGG | 0.385053 | 4.2:-81176788 | MS.gene49872:CDS |
| GTGATGACCATTCGATGGTT+TGG | 0.395292 | 4.2:+81174459 | None:intergenic |
| GGAAAATGGTAGGACCAATA+AGG | 0.411315 | 4.2:-81177630 | None:intergenic |
| TCTATAGCAACTGGATCATA+TGG | 0.419003 | 4.2:+81174556 | None:intergenic |
| CAACTTAGTTATAGTGATGA+AGG | 0.419570 | 4.2:-81177574 | MS.gene49872:CDS |
| ACTTAAAGCAGTAATATATT+GGG | 0.420900 | 4.2:-81175089 | MS.gene49872:intron |
| CATCCACATCCATCTGGCCT+TGG | 0.424382 | 4.2:-81176041 | MS.gene49872:CDS |
| CACTTCAGCAAAGGGATGAT+TGG | 0.428841 | 4.2:-81174968 | MS.gene49872:CDS |
| ATTGATTTCCAGTGTAGACT+TGG | 0.433496 | 4.2:+81174604 | None:intergenic |
| TGAATTTGTGCCTCATTGAC+TGG | 0.439229 | 4.2:+81175839 | None:intergenic |
| CTACTGTCAATGTCTCCAAC+TGG | 0.451353 | 4.2:-81174525 | MS.gene49872:CDS |
| GGTTCCAGTCGGCGTCTTCG+AGG | 0.470091 | 4.2:+81174626 | None:intergenic |
| TTATGCGAGTCTTCTTTGAC+AGG | 0.476039 | 4.2:+81175879 | None:intergenic |
| CTGGTCTGCACTTCAGCAAA+GGG | 0.483151 | 4.2:-81174976 | MS.gene49872:CDS |
| GATACTGTGGTTGGAATTCA+AGG | 0.484531 | 4.2:-81176807 | MS.gene49872:CDS |
| TGCTTCTGAATATAGTCTAC+AGG | 0.490525 | 4.2:+81175043 | None:intergenic |
| AGGTCCTCGAAGACGCCGAC+TGG | 0.497251 | 4.2:-81174630 | MS.gene49872:CDS |
| TTGGTTATTGTGTACTTTGG+TGG | 0.498216 | 4.2:-81176077 | MS.gene49872:CDS |
| TTAGTTATAGTGATGAAGGT+TGG | 0.498885 | 4.2:-81177570 | MS.gene49872:CDS |
| ATGTCAAGGCCATTGACCTC+TGG | 0.499532 | 4.2:-81174995 | MS.gene49872:CDS |
| TCTATTCATCCACATCCATC+TGG | 0.500776 | 4.2:-81176047 | MS.gene49872:CDS |
| TTGATTTCCAGTGTAGACTT+GGG | 0.516004 | 4.2:+81174605 | None:intergenic |
| TGTGGAATTCAACCTTAAGA+TGG | 0.529846 | 4.2:+81175967 | None:intergenic |
| GAACCAAACAACACAATTTG+AGG | 0.531325 | 4.2:+81177607 | None:intergenic |
| AGTTATAGTGATGAAGGTTG+GGG | 0.537356 | 4.2:-81177568 | MS.gene49872:CDS |
| TCTGGTCTGCACTTCAGCAA+AGG | 0.543201 | 4.2:-81174977 | MS.gene49872:CDS |
| AATTGGTGATGACCATTCGA+TGG | 0.544305 | 4.2:+81174454 | None:intergenic |
| TGCTGTTGAGCAACCATCGT+TGG | 0.555054 | 4.2:-81176096 | MS.gene49872:CDS |
| TGGAATTCATTTGTCACATG+AGG | 0.558725 | 4.2:-81174683 | MS.gene49872:CDS |
| AAGTGCAGACCAGAGGTCAA+TGG | 0.560897 | 4.2:+81174986 | None:intergenic |
| TGCATTTCCAAACCATCGAA+TGG | 0.568329 | 4.2:-81174466 | MS.gene49872:CDS |
| TACAAACTTGTATTCTCGCA+AGG | 0.568561 | 4.2:-81177536 | MS.gene49872:intron |
| ACATGAGGACCAAGGCCAGA+TGG | 0.572819 | 4.2:+81176032 | None:intergenic |
| GGACCAAGGCCAGATGGATG+TGG | 0.575529 | 4.2:+81176038 | None:intergenic |
| AGTTGTGAAAGAGATATTGA+AGG | 0.577845 | 4.2:-81174650 | MS.gene49872:CDS |
| TGGCCTTGACATTCATCTCA+TGG | 0.580073 | 4.2:+81175006 | None:intergenic |
| ATATATTGGGACCACTAAAG+AGG | 0.585513 | 4.2:-81175076 | MS.gene49872:CDS |
| TCGTTGGTTATTGTGTACTT+TGG | 0.585768 | 4.2:-81176080 | MS.gene49872:CDS |
| GTATTGGAAGGGAAAATGGT+AGG | 0.592463 | 4.2:-81177640 | None:intergenic |
| ATGTTTCTGGAAGTTCCAGT+TGG | 0.594171 | 4.2:+81174510 | None:intergenic |
| CAGTTCTCCTCCAGTCAATG+AGG | 0.595674 | 4.2:-81175849 | MS.gene49872:CDS |
| ACTGGAACCCAAGTCTACAC+TGG | 0.596478 | 4.2:-81174612 | MS.gene49872:CDS |
| TCTGGATACAATATTTCCCA+AGG | 0.600454 | 4.2:-81176770 | MS.gene49872:intron |
| ACTATAACTAAGTTGAACAA+TGG | 0.604564 | 4.2:+81177582 | None:intergenic |
| GGAATTCATTTGTCACATGA+GGG | 0.607224 | 4.2:-81174682 | MS.gene49872:CDS |
| GTGTAGACTTGGGTTCCAGT+CGG | 0.629499 | 4.2:+81174615 | None:intergenic |
| TATTCTTCAAGGGGTACATG+AGG | 0.652455 | 4.2:+81176017 | None:intergenic |
| TTTGCTGAAGTGCAGACCAG+AGG | 0.667155 | 4.2:+81174979 | None:intergenic |
| TACTTACGTGAAGCAAACAT+CGG | 0.669235 | 4.2:+81174944 | None:intergenic |
| AAGTACACAATAACCAACGA+TGG | 0.696454 | 4.2:+81176083 | None:intergenic |
| ATTTGTGCCTCATTGACTGG+AGG | 0.707676 | 4.2:+81175842 | None:intergenic |
| GTGCCATGAGATGAATGTCA+AGG | 0.713777 | 4.2:-81175009 | MS.gene49872:CDS |
| CAAGGGGTACATGAGGACCA+AGG | 0.723393 | 4.2:+81176024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTCAATTAATAGA+AGG | - | chr4.2:81174847-81174866 | MS.gene49872:intron | 10.0% |
| !! | TAATAAAATTATAACAGAAT+AGG | - | chr4.2:81176354-81176373 | MS.gene49872:intron | 10.0% |
| !! | AAAATTGGAAATTTAATTGA+TGG | - | chr4.2:81174943-81174962 | MS.gene49872:intron | 15.0% |
| !! | AACTCTAATGAATAAATTAT+TGG | - | chr4.2:81176936-81176955 | MS.gene49872:intron | 15.0% |
| !! | AATCAAATAGCATATATAAA+AGG | + | chr4.2:81176296-81176315 | None:intergenic | 15.0% |
| !! | ATTTATATCTTTATAACCAA+CGG | + | chr4.2:81175753-81175772 | None:intergenic | 15.0% |
| !! | CAAAATGAATCTAAATATTA+TGG | + | chr4.2:81175857-81175876 | None:intergenic | 15.0% |
| !! | CATAAATTAGACAAAAAAAT+TGG | - | chr4.2:81174928-81174947 | MS.gene49872:intron | 15.0% |
| !! | TAAATATTATGGTAAAAGTA+GGG | + | chr4.2:81175846-81175865 | None:intergenic | 15.0% |
| !! | TGTAAAAAGAAAATCAAAAT+TGG | + | chr4.2:81176885-81176904 | None:intergenic | 15.0% |
| !!! | CAATTTTTTTGTCTAATTTA+TGG | + | chr4.2:81174930-81174949 | None:intergenic | 15.0% |
| !!! | TATTTTCTTTTTAATCCAAA+AGG | + | chr4.2:81174811-81174830 | None:intergenic | 15.0% |
| !!! | TTTTCATCATGATTAATTTA+TGG | - | chr4.2:81175374-81175393 | MS.gene49872:intron | 15.0% |
| !!! | TTTTCATTTATAAACAATCT+TGG | + | chr4.2:81176697-81176716 | None:intergenic | 15.0% |
| !! | AAAAATGTGGTTAAAAAATG+CGG | + | chr4.2:81177241-81177260 | None:intergenic | 20.0% |
| !! | AAAAGTTACATGAGATATAT+TGG | - | chr4.2:81176730-81176749 | MS.gene49872:intron | 20.0% |
| !! | AACAAAGATGTTATAAACTA+TGG | + | chr4.2:81176617-81176636 | None:intergenic | 20.0% |
| !! | ACAAAGATGTTATAAACTAT+GGG | + | chr4.2:81176616-81176635 | None:intergenic | 20.0% |
| !! | ACTTAAAGCAGTAATATATT+GGG | - | chr4.2:81176959-81176978 | MS.gene49872:intron | 20.0% |
| !! | CTAAATATTATGGTAAAAGT+AGG | + | chr4.2:81175847-81175866 | None:intergenic | 20.0% |
| !! | CTTAATACTATAGAAAAATG+TGG | + | chr4.2:81177254-81177273 | None:intergenic | 20.0% |
| !! | CTTATTTATATGTATGTGTA+GGG | - | chr4.2:81175688-81175707 | MS.gene49872:intron | 20.0% |
| !! | TATCTGAATCTTGATAAATA+TGG | - | chr4.2:81174977-81174996 | MS.gene49872:CDS | 20.0% |
| !! | TCATGAAAAAAAAAAACTAC+AGG | + | chr4.2:81174663-81174682 | None:intergenic | 20.0% |
| !!! | AAAAACAACTTGTTAACAAT+TGG | + | chr4.2:81174690-81174709 | None:intergenic | 20.0% |
| !!! | AAAATTTTGAATCAATACCT+TGG | + | chr4.2:81175298-81175317 | None:intergenic | 20.0% |
| !!! | AAATAAAATTTGCTCTCTTT+TGG | - | chr4.2:81174604-81174623 | MS.gene49872:CDS | 20.0% |
| !!! | AAATTTTGAATCAATACCTT+GGG | + | chr4.2:81175297-81175316 | None:intergenic | 20.0% |
| !!! | AATATATCTCATGTAACTTT+TGG | + | chr4.2:81176731-81176750 | None:intergenic | 20.0% |
| !!! | ATTTCTCTATAGCATTTTTA+TGG | - | chr4.2:81175161-81175180 | MS.gene49872:intron | 20.0% |
| !!! | CACATTTTTCTATAGTATTA+AGG | - | chr4.2:81177252-81177271 | MS.gene49872:intron | 20.0% |
| !!! | GGTAAAAAAATTGTACATTT+TGG | - | chr4.2:81176383-81176402 | MS.gene49872:intron | 20.0% |
| !!! | TGATTATTTCTCATACTTAA+AGG | - | chr4.2:81175893-81175912 | MS.gene49872:intron | 20.0% |
| !!! | TTGTCTTGATACATTTTATA+GGG | - | chr4.2:81177341-81177360 | MS.gene49872:intron | 20.0% |
| ! | ATTGATATCTTAACCGTTAA+CGG | + | chr4.2:81175586-81175605 | None:intergenic | 25.0% |
| ! | GAAGATTATTATCCATCTTA+AGG | - | chr4.2:81176069-81176088 | MS.gene49872:CDS | 25.0% |
| ! | GACTTAAAGCAGTAATATAT+TGG | - | chr4.2:81176958-81176977 | MS.gene49872:intron | 25.0% |
| ! | GATTAATTTATGGTTACTTG+TGG | - | chr4.2:81175384-81175403 | MS.gene49872:intron | 25.0% |
| ! | GCTTATTTATATGTATGTGT+AGG | - | chr4.2:81175687-81175706 | MS.gene49872:intron | 25.0% |
| ! | GTTTGTAAAACTGTTAGATT+TGG | + | chr4.2:81175784-81175803 | None:intergenic | 25.0% |
| ! | TTATAACAGAATAGGACATA+AGG | - | chr4.2:81176362-81176381 | MS.gene49872:intron | 25.0% |
| !! | ACTATAACTAAGTTGAACAA+TGG | + | chr4.2:81174469-81174488 | None:intergenic | 25.0% |
| !! | ATCACATGTGTCTTATTAAA+AGG | - | chr4.2:81177311-81177330 | MS.gene49872:intron | 25.0% |
| !! | ATGAAAGAGAATATGAGTTT+TGG | - | chr4.2:81176327-81176346 | MS.gene49872:intron | 25.0% |
| !! | ATTTTCTCTGTATTCTTCAA+GGG | + | chr4.2:81176044-81176063 | None:intergenic | 25.0% |
| !! | CTTGTCTTGATACATTTTAT+AGG | - | chr4.2:81177340-81177359 | MS.gene49872:intron | 25.0% |
| !! | TATTTTCTCTGTATTCTTCA+AGG | + | chr4.2:81176045-81176064 | None:intergenic | 25.0% |
| AACAAAATCTTAGCCGTTAA+CGG | - | chr4.2:81175570-81175589 | MS.gene49872:intron | 30.0% | |
| AATAAGCGATACATAAGACT+TGG | + | chr4.2:81175674-81175693 | None:intergenic | 30.0% | |
| ACTTGTGGAAGTAATTAATC+AGG | - | chr4.2:81175399-81175418 | MS.gene49872:intron | 30.0% | |
| AGTTGTGAAAGAGATATTGA+AGG | - | chr4.2:81177398-81177417 | MS.gene49872:intron | 30.0% | |
| ATAACAAAACTATAGCGTAG+TGG | + | chr4.2:81175117-81175136 | None:intergenic | 30.0% | |
| ATTCAATTAATAGAAGGCAG+TGG | - | chr4.2:81174853-81174872 | MS.gene49872:intron | 30.0% | |
| CAACTTAGTTATAGTGATGA+AGG | - | chr4.2:81174474-81174493 | MS.gene49872:CDS | 30.0% | |
| CAATGTTTGACTAATCCTAA+TGG | - | chr4.2:81176137-81176156 | MS.gene49872:intron | 30.0% | |
| CTTGTGGAAGTAATTAATCA+GGG | - | chr4.2:81175400-81175419 | MS.gene49872:intron | 30.0% | |
| GAACTTGGTATTGTGAATTA+TGG | - | chr4.2:81174719-81174738 | MS.gene49872:intron | 30.0% | |
| GCGGTAAAATAATGCTTATA+CGG | + | chr4.2:81177222-81177241 | None:intergenic | 30.0% | |
| GTCACACATTAACTATACAT+AGG | - | chr4.2:81175200-81175219 | MS.gene49872:intron | 30.0% | |
| TAGTTATAGTGATGAAGGTT+GGG | - | chr4.2:81174479-81174498 | MS.gene49872:CDS | 30.0% | |
| TGTTCACTCATACTTTATAG+TGG | - | chr4.2:81176265-81176284 | MS.gene49872:intron | 30.0% | |
| TTAGTTATAGTGATGAAGGT+TGG | - | chr4.2:81174478-81174497 | MS.gene49872:CDS | 30.0% | |
| TTATGGTCCAGTTATATTAG+AGG | + | chr4.2:81174913-81174932 | None:intergenic | 30.0% | |
| TTGACAAAGGACAACAAAAT+GGG | + | chr4.2:81176432-81176451 | None:intergenic | 30.0% | |
| TTTCCCATTCAAAATGTTTC+TGG | + | chr4.2:81177554-81177573 | None:intergenic | 30.0% | |
| TTTGACAAAGGACAACAAAA+TGG | + | chr4.2:81176433-81176452 | None:intergenic | 30.0% | |
| ! | AACTTTATGTGTCGACATAT+CGG | + | chr4.2:81176526-81176545 | None:intergenic | 30.0% |
| ! | ACTATATTCAGAAGCATGTT+TGG | - | chr4.2:81177012-81177031 | MS.gene49872:intron | 30.0% |
| ! | ACTTCCAGAAACATTTTGAA+TGG | - | chr4.2:81177547-81177566 | MS.gene49872:CDS | 30.0% |
| ! | CTTCCAGAAACATTTTGAAT+GGG | - | chr4.2:81177548-81177567 | MS.gene49872:CDS | 30.0% |
| ! | CTTGATACATTTTATAGGGA+TGG | - | chr4.2:81177345-81177364 | MS.gene49872:intron | 30.0% |
| ! | GTTTTTCTCAATAGAGAACT+TGG | - | chr4.2:81174704-81174723 | MS.gene49872:intron | 30.0% |
| ! | TAGGCAGATATAATTTTGAG+AGG | - | chr4.2:81175219-81175238 | MS.gene49872:intron | 30.0% |
| ! | TTTTCTCTGTATTCTTCAAG+GGG | + | chr4.2:81176043-81176062 | None:intergenic | 30.0% |
| !! | ATAATTTTGAGAGGATACTG+TGG | - | chr4.2:81175228-81175247 | MS.gene49872:intron | 30.0% |
| !! | GTGTTGAGAACATTTTAAGT+AGG | - | chr4.2:81174881-81174900 | MS.gene49872:intron | 30.0% |
| !! | TTGAGAACATTTTAAGTAGG+TGG | - | chr4.2:81174884-81174903 | MS.gene49872:intron | 30.0% |
| AAATTGACAAGCTGATGCTA+TGG | - | chr4.2:81175428-81175447 | MS.gene49872:intron | 35.0% | |
| AAGTACACAATAACCAACGA+TGG | + | chr4.2:81175968-81175987 | None:intergenic | 35.0% | |
| ACACAAGAACATGATATTGC+AGG | + | chr4.2:81177191-81177210 | None:intergenic | 35.0% | |
| AGTTATAGTGATGAAGGTTG+GGG | - | chr4.2:81174480-81174499 | MS.gene49872:CDS | 35.0% | |
| ATATATTGGGACCACTAAAG+AGG | - | chr4.2:81176972-81176991 | MS.gene49872:intron | 35.0% | |
| CACAAATTCACGAAACATTC+AGG | - | chr4.2:81176222-81176241 | MS.gene49872:intron | 35.0% | |
| CCTAAGATAGTGTTTGACAA+AGG | + | chr4.2:81176445-81176464 | None:intergenic | 35.0% | |
| CCTTTGTCAAACACTATCTT+AGG | - | chr4.2:81176442-81176461 | MS.gene49872:intron | 35.0% | |
| GAAATATATGAGCCGTTTGT+GGG | + | chr4.2:81176667-81176686 | None:intergenic | 35.0% | |
| GAACCAAACAACACAATTTG+AGG | + | chr4.2:81174444-81174463 | None:intergenic | 35.0% | |
| GAATCTTCTGCAAACTCATT+TGG | + | chr4.2:81177471-81177490 | None:intergenic | 35.0% | |
| GATTCATTTGTCCTCTTTAG+TGG | + | chr4.2:81176986-81177005 | None:intergenic | 35.0% | |
| GGAATTCATTTGTCACATGA+GGG | - | chr4.2:81177366-81177385 | MS.gene49872:intron | 35.0% | |
| GTGTGACAAGTTAAACTCAT+TGG | + | chr4.2:81175187-81175206 | None:intergenic | 35.0% | |
| TACAAACTTGTATTCTCGCA+AGG | - | chr4.2:81174512-81174531 | MS.gene49872:CDS | 35.0% | |
| TACTTACGTGAAGCAAACAT+CGG | + | chr4.2:81177107-81177126 | None:intergenic | 35.0% | |
| TCTATAGCAACTGGATCATA+TGG | + | chr4.2:81177495-81177514 | None:intergenic | 35.0% | |
| TCTGGATACAATATTTCCCA+AGG | - | chr4.2:81175278-81175297 | MS.gene49872:intron | 35.0% | |
| TGAAATATATGAGCCGTTTG+TGG | + | chr4.2:81176668-81176687 | None:intergenic | 35.0% | |
| TGCTTCTGAATATAGTCTAC+AGG | + | chr4.2:81177008-81177027 | None:intergenic | 35.0% | |
| TGGAATTCATTTGTCACATG+AGG | - | chr4.2:81177365-81177384 | MS.gene49872:intron | 35.0% | |
| TGTGGAATTCAACCTTAAGA+TGG | + | chr4.2:81176084-81176103 | None:intergenic | 35.0% | |
| TTGATTTCCAGTGTAGACTT+GGG | + | chr4.2:81177446-81177465 | None:intergenic | 35.0% | |
| TTGGTTATTGTGTACTTTGG+TGG | - | chr4.2:81175971-81175990 | MS.gene49872:intron | 35.0% | |
| ! | AACACAATTTGAGGCCTTAT+TGG | + | chr4.2:81174435-81174454 | None:intergenic | 35.0% |
| ! | AAGATTTTGTTGCCGGTAAT+AGG | + | chr4.2:81175561-81175580 | None:intergenic | 35.0% |
| ! | AGATTTTGTTGCCGGTAATA+GGG | + | chr4.2:81175560-81175579 | None:intergenic | 35.0% |
| ! | ATTGATTTCCAGTGTAGACT+TGG | + | chr4.2:81177447-81177466 | None:intergenic | 35.0% |
| ! | CGAAAAAAACAGTGATAGTG+TGG | + | chr4.2:81176102-81176121 | None:intergenic | 35.0% |
| ! | GTCTTTTCATCTATAGCAAC+TGG | + | chr4.2:81177504-81177523 | None:intergenic | 35.0% |
| ! | TCGTTGGTTATTGTGTACTT+TGG | - | chr4.2:81175968-81175987 | MS.gene49872:intron | 35.0% |
| ! | TCTCATGTAACTTTTGGTCA+TGG | + | chr4.2:81176725-81176744 | None:intergenic | 35.0% |
| ! | TGACAGCTGATTCTTCAAAT+TGG | + | chr4.2:81177614-81177633 | None:intergenic | 35.0% |
| !! | ATAGTTCTGAATCACAACTG+TGG | + | chr4.2:81177290-81177309 | None:intergenic | 35.0% |
| !! | TGAGATATATTGGTCTTCAG+AGG | - | chr4.2:81176740-81176759 | MS.gene49872:intron | 35.0% |
| AAGAACAGTACTGCATGCAA+TGG | - | chr4.2:81174778-81174797 | MS.gene49872:intron | 40.0% | |
| ATAGTCATTGTGTGGTGCAT+TGG | - | chr4.2:81175718-81175737 | MS.gene49872:intron | 40.0% | |
| ATGCACCACACAATGACTAT+AGG | + | chr4.2:81175718-81175737 | None:intergenic | 40.0% | |
| CGATTGTGTCTGCAAAATCA+AGG | - | chr4.2:81176787-81176806 | MS.gene49872:CDS | 40.0% | |
| GATACTGTGGTTGGAATTCA+AGG | - | chr4.2:81175241-81175260 | MS.gene49872:intron | 40.0% | |
| GATCACCTATAGTCATTGTG+TGG | - | chr4.2:81175710-81175729 | MS.gene49872:intron | 40.0% | |
| GTGGTGTCCTCTAATATAAC+TGG | - | chr4.2:81174903-81174922 | MS.gene49872:intron | 40.0% | |
| TATGTATGTGACTGACCAGT+TGG | - | chr4.2:81175522-81175541 | MS.gene49872:intron | 40.0% | |
| TCTATTCATCCACATCCATC+TGG | - | chr4.2:81176001-81176020 | MS.gene49872:CDS | 40.0% | |
| TGAATTTGTGCCTCATTGAC+TGG | + | chr4.2:81176212-81176231 | None:intergenic | 40.0% | |
| TGCATTTCCAAACCATCGAA+TGG | - | chr4.2:81177582-81177601 | MS.gene49872:CDS | 40.0% | |
| TGGAAGTAATTAATCAGGGC+TGG | - | chr4.2:81175404-81175423 | MS.gene49872:intron | 40.0% | |
| TTATGCGAGTCTTCTTTGAC+AGG | + | chr4.2:81176172-81176191 | None:intergenic | 40.0% | |
| ! | AAAATCAAGGTTTTCGCCTC+TGG | - | chr4.2:81176800-81176819 | MS.gene49872:CDS | 40.0% |
| ! | AAATCAAGGTTTTCGCCTCT+GGG | - | chr4.2:81176801-81176820 | MS.gene49872:CDS | 40.0% |
| ! | AACGGCTAAGATTTTGTTGC+CGG | + | chr4.2:81175568-81175587 | None:intergenic | 40.0% |
| ! | AGGCCTCAAATTGTGTTGTT+TGG | - | chr4.2:81174438-81174457 | MS.gene49872:CDS | 40.0% |
| ! | GATTTTGTTGCCGGTAATAG+GGG | + | chr4.2:81175559-81175578 | None:intergenic | 40.0% |
| ! | TATTCTTCAAGGGGTACATG+AGG | + | chr4.2:81176034-81176053 | None:intergenic | 40.0% |
| ! | TGATTTTGCAGACACAATCG+CGG | + | chr4.2:81176787-81176806 | None:intergenic | 40.0% |
| ! | TGCAATGGAACAGTTCCTTT+TGG | - | chr4.2:81174793-81174812 | MS.gene49872:intron | 40.0% |
| !! | AATTGGTGATGACCATTCGA+TGG | + | chr4.2:81177597-81177616 | None:intergenic | 40.0% |
| !! | ATGGGCATTGACACATTCAT+TGG | + | chr4.2:81176598-81176617 | None:intergenic | 40.0% |
| !! | ATGTTTCTGGAAGTTCCAGT+TGG | + | chr4.2:81177541-81177560 | None:intergenic | 40.0% |
| !! | TTTTGAGAGGATACTGTGGT+TGG | - | chr4.2:81175232-81175251 | MS.gene49872:intron | 40.0% |
| CACTTCAGCAAAGGGATGAT+TGG | - | chr4.2:81177080-81177099 | MS.gene49872:intron | 45.0% | |
| CTACTGTCAATGTCTCCAAC+TGG | - | chr4.2:81177523-81177542 | MS.gene49872:intron | 45.0% | |
| GGTAAAAGTAGGGAGCGATT+TGG | + | chr4.2:81175836-81175855 | None:intergenic | 45.0% | |
| GTGATGACCATTCGATGGTT+TGG | + | chr4.2:81177592-81177611 | None:intergenic | 45.0% | |
| GTGCCATGAGATGAATGTCA+AGG | - | chr4.2:81177039-81177058 | MS.gene49872:intron | 45.0% | |
| TATGCCAGTGTTGTCAATCG+CGG | - | chr4.2:81175062-81175081 | MS.gene49872:CDS | 45.0% | |
| TCATCCAAAGCCCCTATTAC+CGG | - | chr4.2:81175546-81175565 | MS.gene49872:intron | 45.0% | |
| ! | AATCAAGGTTTTCGCCTCTG+GGG | - | chr4.2:81176802-81176821 | MS.gene49872:CDS | 45.0% |
| ! | ATTTGTGCCTCATTGACTGG+AGG | + | chr4.2:81176209-81176228 | None:intergenic | 45.0% |
| ! | GCACCTTTGATCTGAAGTGT+CGG | + | chr4.2:81176495-81176514 | None:intergenic | 45.0% |
| ! | TGGCCTTGACATTCATCTCA+TGG | + | chr4.2:81177045-81177064 | None:intergenic | 45.0% |
| ! | TGTGTCGACATATCGGTATC+AGG | + | chr4.2:81176519-81176538 | None:intergenic | 45.0% |
| AACTGTTGCGCGATACTGCA+CGG | - | chr4.2:81175626-81175645 | MS.gene49872:intron | 50.0% | |
| AAGTGCAGACCAGAGGTCAA+TGG | + | chr4.2:81177065-81177084 | None:intergenic | 50.0% | |
| ACTGGAACCCAAGTCTACAC+TGG | - | chr4.2:81177436-81177455 | MS.gene49872:intron | 50.0% | |
| ATGTCAAGGCCATTGACCTC+TGG | - | chr4.2:81177053-81177072 | MS.gene49872:intron | 50.0% | |
| CACCATACAGAAGCCGAAGA+GGG | - | chr4.2:81175809-81175828 | MS.gene49872:intron | 50.0% | |
| CAGTTCTCCTCCAGTCAATG+AGG | - | chr4.2:81176199-81176218 | MS.gene49872:intron | 50.0% | |
| CTATCCGCGATTGACAACAC+TGG | + | chr4.2:81175069-81175088 | None:intergenic | 50.0% | |
| CTGGTCTGCACTTCAGCAAA+GGG | - | chr4.2:81177072-81177091 | MS.gene49872:intron | 50.0% | |
| GAGTCTTCTTTGACAGGCTC+TGG | + | chr4.2:81176166-81176185 | None:intergenic | 50.0% | |
| GTGTAGACTTGGGTTCCAGT+CGG | + | chr4.2:81177436-81177455 | None:intergenic | 50.0% | |
| TCTGGTCTGCACTTCAGCAA+AGG | - | chr4.2:81177071-81177090 | MS.gene49872:intron | 50.0% | |
| TGCAGACACAATCGCGGTTA+TGG | + | chr4.2:81176781-81176800 | None:intergenic | 50.0% | |
| TGCTGTTGAGCAACCATCGT+TGG | - | chr4.2:81175952-81175971 | MS.gene49872:intron | 50.0% | |
| TTTGCTGAAGTGCAGACCAG+AGG | + | chr4.2:81177072-81177091 | None:intergenic | 50.0% | |
| ! | GAATTCAAGGCGTGCTGTTC+AGG | - | chr4.2:81175254-81175273 | MS.gene49872:intron | 50.0% |
| ! | GCACCGACACTTCAGATCAA+AGG | - | chr4.2:81176489-81176508 | MS.gene49872:intron | 50.0% |
| !! | GAAGTGTCGGTGCTACGTAT+AGG | + | chr4.2:81176482-81176501 | None:intergenic | 50.0% |
| !! | GACAGGCTCTGGAAACCATT+AGG | + | chr4.2:81176155-81176174 | None:intergenic | 50.0% |
| !! | GCATTGGCTTGTAGTTCCGT+TGG | - | chr4.2:81175734-81175753 | MS.gene49872:intron | 50.0% |
| ACATGAGGACCAAGGCCAGA+TGG | + | chr4.2:81176019-81176038 | None:intergenic | 55.0% | |
| ACTGTTGCGCGATACTGCAC+GGG | - | chr4.2:81175627-81175646 | MS.gene49872:intron | 55.0% | |
| ATGAGCCGTTTGTGGGTGTG+TGG | + | chr4.2:81176660-81176679 | None:intergenic | 55.0% | |
| CATCCACATCCATCTGGCCT+TGG | - | chr4.2:81176007-81176026 | MS.gene49872:CDS | 55.0% | |
| GACCCTCTTCGGCTTCTGTA+TGG | + | chr4.2:81175814-81175833 | None:intergenic | 55.0% | |
| GCACCATACAGAAGCCGAAG+AGG | - | chr4.2:81175808-81175827 | MS.gene49872:intron | 55.0% | |
| GTGCAGTATCGCGCAACAGT+TGG | + | chr4.2:81175627-81175646 | None:intergenic | 55.0% | |
| GTTGCCGGTAATAGGGGCTT+TGG | + | chr4.2:81175553-81175572 | None:intergenic | 55.0% | |
| TGAGCCGTTTGTGGGTGTGT+GGG | + | chr4.2:81176659-81176678 | None:intergenic | 55.0% | |
| ! | AAGGCGTGCTGTTCAGGTTC+TGG | - | chr4.2:81175260-81175279 | MS.gene49872:intron | 55.0% |
| ! | CAAGGGGTACATGAGGACCA+AGG | + | chr4.2:81176027-81176046 | None:intergenic | 55.0% |
| ! | GGAGCGATTTGGACCCTCTT+CGG | + | chr4.2:81175825-81175844 | None:intergenic | 55.0% |
| !! | GGGGCTTTGGATGATCCAAC+TGG | + | chr4.2:81175540-81175559 | None:intergenic | 55.0% |
| !!! | TTTCGCCTCTGGGGCTTTTG+TGG | - | chr4.2:81176811-81176830 | MS.gene49872:CDS | 55.0% |
| AGCCGTTTGTGGGTGTGTGG+GGG | + | chr4.2:81176657-81176676 | None:intergenic | 60.0% | |
| GAGCCGTTTGTGGGTGTGTG+GGG | + | chr4.2:81176658-81176677 | None:intergenic | 60.0% | |
| GGACCAAGGCCAGATGGATG+TGG | + | chr4.2:81176013-81176032 | None:intergenic | 60.0% | |
| TTGCGCGATACTGCACGGGA+TGG | - | chr4.2:81175631-81175650 | MS.gene49872:intron | 60.0% | |
| AGGTCCTCGAAGACGCCGAC+TGG | - | chr4.2:81177418-81177437 | MS.gene49872:intron | 65.0% | |
| CCCCCCCACACACCCACAAA+CGG | - | chr4.2:81176652-81176671 | MS.gene49872:intron | 65.0% | |
| CCGTTTGTGGGTGTGTGGGG+GGG | + | chr4.2:81176655-81176674 | None:intergenic | 65.0% | |
| CGACGCCACAAAAGCCCCAG+AGG | + | chr4.2:81176819-81176838 | None:intergenic | 65.0% | |
| CGCGATACTGCACGGGATGG+AGG | - | chr4.2:81175634-81175653 | MS.gene49872:intron | 65.0% | |
| CGTTTGTGGGTGTGTGGGGG+GGG | + | chr4.2:81176654-81176673 | None:intergenic | 65.0% | |
| GCCGTTTGTGGGTGTGTGGG+GGG | + | chr4.2:81176656-81176675 | None:intergenic | 65.0% | |
| GGTTCCAGTCGGCGTCTTCG+AGG | + | chr4.2:81177425-81177444 | None:intergenic | 65.0% | |
| GTTTGTGGGTGTGTGGGGGG+GGG | + | chr4.2:81176653-81176672 | None:intergenic | 65.0% | |
| TTTGTGGGTGTGTGGGGGGG+GGG | + | chr4.2:81176652-81176671 | None:intergenic | 65.0% | |
| TTGTGGGTGTGTGGGGGGGG+GGG | + | chr4.2:81176651-81176670 | None:intergenic | 70.0% | |
| TGTGGGTGTGTGGGGGGGGG+GGG | + | chr4.2:81176650-81176669 | None:intergenic | 75.0% | |
| ! | GTGGGTGTGTGGGGGGGGGG+GGG | + | chr4.2:81176649-81176668 | None:intergenic | 80.0% |
| ! | TGGGTGTGTGGGGGGGGGGG+GGG | + | chr4.2:81176648-81176667 | None:intergenic | 80.0% |
| ! | GGGTGTGTGGGGGGGGGGGG+GGG | + | chr4.2:81176647-81176666 | None:intergenic | 85.0% |
| ! | GGTGTGTGGGGGGGGGGGGG+GGG | + | chr4.2:81176646-81176665 | None:intergenic | 85.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | + | chr4.2:81176645-81176664 | None:intergenic | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | + | chr4.2:81176644-81176663 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 81174423 | 81177647 | 81174423 | ID=MS.gene49872 |
| chr4.2 | mRNA | 81174423 | 81177647 | 81174423 | ID=MS.gene49872.t1;Parent=MS.gene49872 |
| chr4.2 | exon | 81177537 | 81177647 | 81177537 | ID=MS.gene49872.t1.exon1;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81177537 | 81177647 | 81177537 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| chr4.2 | exon | 81176771 | 81176848 | 81176771 | ID=MS.gene49872.t1.exon2;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81176771 | 81176848 | 81176771 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| chr4.2 | exon | 81175980 | 81176120 | 81175980 | ID=MS.gene49872.t1.exon3;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81175980 | 81176120 | 81175980 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| chr4.2 | exon | 81175827 | 81175903 | 81175827 | ID=MS.gene49872.t1.exon4;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81175827 | 81175903 | 81175827 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| chr4.2 | exon | 81174951 | 81175100 | 81174951 | ID=MS.gene49872.t1.exon5;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81174951 | 81175100 | 81174951 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| chr4.2 | exon | 81174423 | 81174708 | 81174423 | ID=MS.gene49872.t1.exon6;Parent=MS.gene49872.t1 |
| chr4.2 | CDS | 81174423 | 81174708 | 81174423 | ID=cds.MS.gene49872.t1;Parent=MS.gene49872.t1 |
| Gene Sequence |
| Protein sequence |
