Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62848.t1 | AES90988.2 | 96.9 | 223 | 7 | 0 | 6 | 228 | 98 | 320 | 9.50E-120 | 439.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62848.t1 | Q9XJ36 | 71.9 | 221 | 62 | 0 | 8 | 228 | 59 | 279 | 1.3e-93 | 344.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62848.t1 | G7JK76 | 96.9 | 223 | 7 | 0 | 6 | 228 | 98 | 320 | 6.9e-120 | 439.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene62848 | 0.882213 | 1.26E-70 | -1.69E-46 |
MS.gene049171 | MS.gene62848 | 0.917697 | 3.87E-86 | -1.69E-46 |
MS.gene049173 | MS.gene62848 | 0.837816 | 4.16E-57 | -1.69E-46 |
MS.gene049217 | MS.gene62848 | 0.892445 | 1.58E-74 | -1.69E-46 |
MS.gene049222 | MS.gene62848 | 0.917327 | 6.08E-86 | -1.69E-46 |
MS.gene049232 | MS.gene62848 | 0.825675 | 4.12E-54 | -1.69E-46 |
MS.gene049285 | MS.gene62848 | 0.914645 | 1.50E-84 | -1.69E-46 |
MS.gene049320 | MS.gene62848 | 0.903172 | 4.57E-79 | -1.69E-46 |
MS.gene04939 | MS.gene62848 | 0.809889 | 1.51E-50 | -1.69E-46 |
MS.gene049427 | MS.gene62848 | 0.824683 | 7.07E-54 | -1.69E-46 |
MS.gene049609 | MS.gene62848 | 0.90444 | 1.22E-79 | -1.69E-46 |
MS.gene049615 | MS.gene62848 | 0.851944 | 6.38E-61 | -1.69E-46 |
MS.gene049627 | MS.gene62848 | 0.868333 | 7.06E-66 | -1.69E-46 |
MS.gene049633 | MS.gene62848 | 0.845821 | 3.20E-59 | -1.69E-46 |
MS.gene049805 | MS.gene62848 | 0.896735 | 2.77E-76 | -1.69E-46 |
MS.gene05010 | MS.gene62848 | 0.864643 | 1.05E-64 | -1.69E-46 |
MS.gene050163 | MS.gene62848 | 0.913875 | 3.70E-84 | -1.69E-46 |
MS.gene050165 | MS.gene62848 | 0.895588 | 8.31E-76 | -1.69E-46 |
MS.gene050170 | MS.gene62848 | 0.838963 | 2.10E-57 | -1.69E-46 |
MS.gene050323 | MS.gene62848 | 0.834001 | 3.86E-56 | -1.69E-46 |
MS.gene050325 | MS.gene62848 | -0.800389 | 1.47E-48 | -1.69E-46 |
MS.gene050327 | MS.gene62848 | -0.806714 | 7.19E-50 | -1.69E-46 |
MS.gene050333 | MS.gene62848 | 0.877824 | 4.61E-69 | -1.69E-46 |
MS.gene050444 | MS.gene62848 | 0.85345 | 2.37E-61 | -1.69E-46 |
MS.gene050496 | MS.gene62848 | 0.820155 | 7.96E-53 | -1.69E-46 |
MS.gene050504 | MS.gene62848 | 0.90231 | 1.11E-78 | -1.69E-46 |
MS.gene050518 | MS.gene62848 | 0.902505 | 9.05E-79 | -1.69E-46 |
MS.gene050538 | MS.gene62848 | 0.870016 | 2.01E-66 | -1.69E-46 |
MS.gene050547 | MS.gene62848 | -0.810553 | 1.09E-50 | -1.69E-46 |
MS.gene050577 | MS.gene62848 | 0.879336 | 1.35E-69 | -1.69E-46 |
MS.gene050593 | MS.gene62848 | 0.876028 | 1.93E-68 | -1.69E-46 |
MS.gene050612 | MS.gene62848 | 0.89357 | 5.56E-75 | -1.69E-46 |
MS.gene050662 | MS.gene62848 | 0.805691 | 1.18E-49 | -1.69E-46 |
MS.gene050670 | MS.gene62848 | 0.80431 | 2.30E-49 | -1.69E-46 |
MS.gene050675 | MS.gene62848 | 0.876098 | 1.83E-68 | -1.69E-46 |
MS.gene050690 | MS.gene62848 | 0.831495 | 1.62E-55 | -1.69E-46 |
MS.gene050699 | MS.gene62848 | 0.902531 | 8.82E-79 | -1.69E-46 |
MS.gene050747 | MS.gene62848 | 0.89846 | 5.19E-77 | -1.69E-46 |
MS.gene050772 | MS.gene62848 | 0.912453 | 1.92E-83 | -1.69E-46 |
MS.gene050781 | MS.gene62848 | 0.833804 | 4.32E-56 | -1.69E-46 |
MS.gene05080 | MS.gene62848 | 0.875315 | 3.40E-68 | -1.69E-46 |
MS.gene05081 | MS.gene62848 | 0.824615 | 7.33E-54 | -1.69E-46 |
MS.gene050868 | MS.gene62848 | 0.859517 | 3.92E-63 | -1.69E-46 |
MS.gene050871 | MS.gene62848 | 0.85546 | 6.22E-62 | -1.69E-46 |
MS.gene050876 | MS.gene62848 | 0.827472 | 1.54E-54 | -1.69E-46 |
MS.gene050904 | MS.gene62848 | 0.837936 | 3.87E-57 | -1.69E-46 |
MS.gene050950 | MS.gene62848 | 0.888615 | 5.04E-73 | -1.69E-46 |
MS.gene050986 | MS.gene62848 | 0.867427 | 1.38E-65 | -1.69E-46 |
MS.gene05100 | MS.gene62848 | 0.884453 | 1.89E-71 | -1.69E-46 |
MS.gene05104 | MS.gene62848 | -0.800655 | 1.30E-48 | -1.69E-46 |
MS.gene05105 | MS.gene62848 | 0.827235 | 1.75E-54 | -1.69E-46 |
MS.gene051167 | MS.gene62848 | -0.82106 | 4.94E-53 | -1.69E-46 |
MS.gene051228 | MS.gene62848 | 0.833583 | 4.91E-56 | -1.69E-46 |
MS.gene051317 | MS.gene62848 | 0.861691 | 8.59E-64 | -1.69E-46 |
MS.gene051364 | MS.gene62848 | -0.818797 | 1.63E-52 | -1.69E-46 |
MS.gene051366 | MS.gene62848 | -0.822532 | 2.25E-53 | -1.69E-46 |
MS.gene051387 | MS.gene62848 | 0.861582 | 9.27E-64 | -1.69E-46 |
MS.gene051551 | MS.gene62848 | 0.851854 | 6.77E-61 | -1.69E-46 |
MS.gene051666 | MS.gene62848 | 0.907686 | 3.87E-81 | -1.69E-46 |
MS.gene051694 | MS.gene62848 | 0.906612 | 1.23E-80 | -1.69E-46 |
MS.gene051734 | MS.gene62848 | 0.803721 | 3.04E-49 | -1.69E-46 |
MS.gene051810 | MS.gene62848 | 0.857458 | 1.61E-62 | -1.69E-46 |
MS.gene051838 | MS.gene62848 | 0.842564 | 2.39E-58 | -1.69E-46 |
MS.gene051858 | MS.gene62848 | 0.881514 | 2.25E-70 | -1.69E-46 |
MS.gene051874 | MS.gene62848 | 0.828153 | 1.05E-54 | -1.69E-46 |
MS.gene051949 | MS.gene62848 | 0.85062 | 1.51E-60 | -1.69E-46 |
MS.gene052164 | MS.gene62848 | 0.857224 | 1.89E-62 | -1.69E-46 |
MS.gene052271 | MS.gene62848 | 0.832226 | 1.07E-55 | -1.69E-46 |
MS.gene052379 | MS.gene62848 | 0.857364 | 1.72E-62 | -1.69E-46 |
MS.gene052421 | MS.gene62848 | 0.825924 | 3.59E-54 | -1.69E-46 |
MS.gene052481 | MS.gene62848 | 0.822409 | 2.41E-53 | -1.69E-46 |
MS.gene052482 | MS.gene62848 | 0.825134 | 5.53E-54 | -1.69E-46 |
MS.gene052484 | MS.gene62848 | 0.8328 | 7.69E-56 | -1.69E-46 |
MS.gene052486 | MS.gene62848 | 0.832605 | 8.59E-56 | -1.69E-46 |
MS.gene052501 | MS.gene62848 | 0.838373 | 2.99E-57 | -1.69E-46 |
MS.gene052503 | MS.gene62848 | 0.870185 | 1.77E-66 | -1.69E-46 |
MS.gene052504 | MS.gene62848 | 0.822676 | 2.09E-53 | -1.69E-46 |
MS.gene052505 | MS.gene62848 | 0.82946 | 5.09E-55 | -1.69E-46 |
MS.gene052506 | MS.gene62848 | 0.866171 | 3.47E-65 | -1.69E-46 |
MS.gene052605 | MS.gene62848 | 0.810478 | 1.13E-50 | -1.69E-46 |
MS.gene052606 | MS.gene62848 | -0.803967 | 2.71E-49 | -1.69E-46 |
MS.gene052615 | MS.gene62848 | 0.886163 | 4.34E-72 | -1.69E-46 |
MS.gene052670 | MS.gene62848 | 0.833755 | 4.44E-56 | -1.69E-46 |
MS.gene052820 | MS.gene62848 | 0.846359 | 2.28E-59 | -1.69E-46 |
MS.gene052822 | MS.gene62848 | 0.868469 | 6.38E-66 | -1.69E-46 |
MS.gene052823 | MS.gene62848 | 0.861568 | 9.36E-64 | -1.69E-46 |
MS.gene052825 | MS.gene62848 | 0.86406 | 1.59E-64 | -1.69E-46 |
MS.gene052870 | MS.gene62848 | 0.828247 | 1.00E-54 | -1.69E-46 |
MS.gene052872 | MS.gene62848 | 0.838009 | 3.71E-57 | -1.69E-46 |
MS.gene052916 | MS.gene62848 | 0.840756 | 7.18E-58 | -1.69E-46 |
MS.gene052966 | MS.gene62848 | 0.863823 | 1.89E-64 | -1.69E-46 |
MS.gene052982 | MS.gene62848 | 0.838748 | 2.39E-57 | -1.69E-46 |
MS.gene053009 | MS.gene62848 | 0.834409 | 3.05E-56 | -1.69E-46 |
MS.gene053103 | MS.gene62848 | 0.836591 | 8.55E-57 | -1.69E-46 |
MS.gene053104 | MS.gene62848 | 0.860955 | 1.44E-63 | -1.69E-46 |
MS.gene053107 | MS.gene62848 | 0.828921 | 6.87E-55 | -1.69E-46 |
MS.gene053117 | MS.gene62848 | 0.806212 | 9.18E-50 | -1.69E-46 |
MS.gene053203 | MS.gene62848 | 0.888125 | 7.79E-73 | -1.69E-46 |
MS.gene053207 | MS.gene62848 | 0.886419 | 3.48E-72 | -1.69E-46 |
MS.gene053213 | MS.gene62848 | 0.910364 | 2.03E-82 | -1.69E-46 |
MS.gene053284 | MS.gene62848 | 0.828979 | 6.65E-55 | -1.69E-46 |
MS.gene053285 | MS.gene62848 | 0.827686 | 1.36E-54 | -1.69E-46 |
MS.gene053286 | MS.gene62848 | 0.903595 | 2.95E-79 | -1.69E-46 |
MS.gene053322 | MS.gene62848 | 0.874803 | 5.08E-68 | -1.69E-46 |
MS.gene053421 | MS.gene62848 | -0.821883 | 3.19E-53 | -1.69E-46 |
MS.gene053436 | MS.gene62848 | 0.859711 | 3.42E-63 | -1.69E-46 |
MS.gene053479 | MS.gene62848 | 0.851416 | 9.00E-61 | -1.69E-46 |
MS.gene053480 | MS.gene62848 | 0.81801 | 2.45E-52 | -1.69E-46 |
MS.gene053574 | MS.gene62848 | 0.871794 | 5.21E-67 | -1.69E-46 |
MS.gene053579 | MS.gene62848 | 0.86535 | 6.29E-65 | -1.69E-46 |
MS.gene053626 | MS.gene62848 | 0.850539 | 1.59E-60 | -1.69E-46 |
MS.gene053632 | MS.gene62848 | 0.904328 | 1.38E-79 | -1.69E-46 |
MS.gene053824 | MS.gene62848 | 0.876042 | 1.91E-68 | -1.69E-46 |
MS.gene053915 | MS.gene62848 | 0.818816 | 1.61E-52 | -1.69E-46 |
MS.gene053916 | MS.gene62848 | 0.875602 | 2.71E-68 | -1.69E-46 |
MS.gene054003 | MS.gene62848 | 0.830644 | 2.62E-55 | -1.69E-46 |
MS.gene054408 | MS.gene62848 | 0.861954 | 7.14E-64 | -1.69E-46 |
MS.gene054595 | MS.gene62848 | 0.869674 | 2.59E-66 | -1.69E-46 |
MS.gene054600 | MS.gene62848 | 0.896403 | 3.81E-76 | -1.69E-46 |
MS.gene054642 | MS.gene62848 | 0.909367 | 6.16E-82 | -1.69E-46 |
MS.gene054706 | MS.gene62848 | -0.823715 | 1.19E-53 | -1.69E-46 |
MS.gene05470 | MS.gene62848 | 0.874885 | 4.76E-68 | -1.69E-46 |
MS.gene054802 | MS.gene62848 | 0.801703 | 7.95E-49 | -1.69E-46 |
MS.gene054804 | MS.gene62848 | 0.802457 | 5.56E-49 | -1.69E-46 |
MS.gene054884 | MS.gene62848 | -0.816486 | 5.39E-52 | -1.69E-46 |
MS.gene054927 | MS.gene62848 | 0.860807 | 1.60E-63 | -1.69E-46 |
MS.gene054954 | MS.gene62848 | 0.888555 | 5.32E-73 | -1.69E-46 |
MS.gene054959 | MS.gene62848 | -0.808663 | 2.77E-50 | -1.69E-46 |
MS.gene05505 | MS.gene62848 | 0.85327 | 2.67E-61 | -1.69E-46 |
MS.gene055154 | MS.gene62848 | -0.809973 | 1.45E-50 | -1.69E-46 |
MS.gene055206 | MS.gene62848 | 0.881005 | 3.44E-70 | -1.69E-46 |
MS.gene055212 | MS.gene62848 | 0.805878 | 1.08E-49 | -1.69E-46 |
MS.gene055224 | MS.gene62848 | 0.845064 | 5.13E-59 | -1.69E-46 |
MS.gene055289 | MS.gene62848 | 0.86539 | 6.11E-65 | -1.69E-46 |
MS.gene055362 | MS.gene62848 | 0.9146 | 1.59E-84 | -1.69E-46 |
MS.gene055397 | MS.gene62848 | 0.811531 | 6.68E-51 | -1.69E-46 |
MS.gene055412 | MS.gene62848 | 0.806138 | 9.51E-50 | -1.69E-46 |
MS.gene055499 | MS.gene62848 | 0.852706 | 3.87E-61 | -1.69E-46 |
MS.gene055502 | MS.gene62848 | 0.907184 | 6.66E-81 | -1.69E-46 |
MS.gene055536 | MS.gene62848 | -0.817415 | 3.34E-52 | -1.69E-46 |
MS.gene055577 | MS.gene62848 | 0.925281 | 2.27E-90 | -1.69E-46 |
MS.gene055636 | MS.gene62848 | 0.807373 | 5.22E-50 | -1.69E-46 |
MS.gene055638 | MS.gene62848 | 0.817024 | 4.09E-52 | -1.69E-46 |
MS.gene055647 | MS.gene62848 | 0.839904 | 1.20E-57 | -1.69E-46 |
MS.gene055722 | MS.gene62848 | 0.873407 | 1.51E-67 | -1.69E-46 |
MS.gene055748 | MS.gene62848 | 0.874442 | 6.73E-68 | -1.69E-46 |
MS.gene055750 | MS.gene62848 | 0.858301 | 9.05E-63 | -1.69E-46 |
MS.gene055751 | MS.gene62848 | 0.861602 | 9.14E-64 | -1.69E-46 |
MS.gene05589 | MS.gene62848 | 0.837393 | 5.34E-57 | -1.69E-46 |
MS.gene05592 | MS.gene62848 | 0.863551 | 2.30E-64 | -1.69E-46 |
MS.gene055941 | MS.gene62848 | 0.894736 | 1.86E-75 | -1.69E-46 |
MS.gene055956 | MS.gene62848 | -0.819551 | 1.09E-52 | -1.69E-46 |
MS.gene056040 | MS.gene62848 | 0.820264 | 7.52E-53 | -1.69E-46 |
MS.gene056083 | MS.gene62848 | 0.881648 | 2.01E-70 | -1.69E-46 |
MS.gene056374 | MS.gene62848 | 0.883075 | 6.10E-71 | -1.69E-46 |
MS.gene056409 | MS.gene62848 | 0.835418 | 1.70E-56 | -1.69E-46 |
MS.gene056449 | MS.gene62848 | 0.810292 | 1.24E-50 | -1.69E-46 |
MS.gene056487 | MS.gene62848 | 0.812659 | 3.79E-51 | -1.69E-46 |
MS.gene056504 | MS.gene62848 | 0.863725 | 2.03E-64 | -1.69E-46 |
MS.gene056510 | MS.gene62848 | 0.878524 | 2.62E-69 | -1.69E-46 |
MS.gene056549 | MS.gene62848 | 0.829234 | 5.77E-55 | -1.69E-46 |
MS.gene056550 | MS.gene62848 | -0.831624 | 1.50E-55 | -1.69E-46 |
MS.gene056610 | MS.gene62848 | 0.879839 | 8.98E-70 | -1.69E-46 |
MS.gene05664 | MS.gene62848 | 0.811098 | 8.30E-51 | -1.69E-46 |
MS.gene056657 | MS.gene62848 | 0.891783 | 2.90E-74 | -1.69E-46 |
MS.gene05666 | MS.gene62848 | 0.807221 | 5.62E-50 | -1.69E-46 |
MS.gene056692 | MS.gene62848 | 0.901303 | 3.07E-78 | -1.69E-46 |
MS.gene056897 | MS.gene62848 | 0.805573 | 1.25E-49 | -1.69E-46 |
MS.gene056898 | MS.gene62848 | 0.807957 | 3.92E-50 | -1.69E-46 |
MS.gene056946 | MS.gene62848 | 0.800802 | 1.21E-48 | -1.69E-46 |
MS.gene057011 | MS.gene62848 | 0.851943 | 6.38E-61 | -1.69E-46 |
MS.gene057048 | MS.gene62848 | 0.802658 | 5.05E-49 | -1.69E-46 |
MS.gene057076 | MS.gene62848 | 0.837188 | 6.02E-57 | -1.69E-46 |
MS.gene057086 | MS.gene62848 | 0.801276 | 9.72E-49 | -1.69E-46 |
MS.gene057129 | MS.gene62848 | 0.879062 | 1.69E-69 | -1.69E-46 |
MS.gene057146 | MS.gene62848 | 0.836722 | 7.92E-57 | -1.69E-46 |
MS.gene057196 | MS.gene62848 | 0.815999 | 6.93E-52 | -1.69E-46 |
MS.gene057331 | MS.gene62848 | 0.867066 | 1.80E-65 | -1.69E-46 |
MS.gene057332 | MS.gene62848 | 0.805428 | 1.34E-49 | -1.69E-46 |
MS.gene057416 | MS.gene62848 | 0.916857 | 1.08E-85 | -1.69E-46 |
MS.gene057658 | MS.gene62848 | 0.89149 | 3.79E-74 | -1.69E-46 |
MS.gene057734 | MS.gene62848 | 0.811969 | 5.37E-51 | -1.69E-46 |
MS.gene057831 | MS.gene62848 | 0.888825 | 4.19E-73 | -1.69E-46 |
MS.gene057856 | MS.gene62848 | 0.827325 | 1.67E-54 | -1.69E-46 |
MS.gene057857 | MS.gene62848 | 0.817929 | 2.56E-52 | -1.69E-46 |
MS.gene05787 | MS.gene62848 | 0.80459 | 2.01E-49 | -1.69E-46 |
MS.gene057926 | MS.gene62848 | 0.827712 | 1.34E-54 | -1.69E-46 |
MS.gene058006 | MS.gene62848 | 0.830286 | 3.20E-55 | -1.69E-46 |
MS.gene058019 | MS.gene62848 | 0.87384 | 1.08E-67 | -1.69E-46 |
MS.gene058130 | MS.gene62848 | 0.831427 | 1.68E-55 | -1.69E-46 |
MS.gene058293 | MS.gene62848 | 0.807639 | 4.58E-50 | -1.69E-46 |
MS.gene058323 | MS.gene62848 | 0.857793 | 1.28E-62 | -1.69E-46 |
MS.gene058334 | MS.gene62848 | -0.832607 | 8.58E-56 | -1.69E-46 |
MS.gene058338 | MS.gene62848 | 0.826421 | 2.74E-54 | -1.69E-46 |
MS.gene05837 | MS.gene62848 | 0.88754 | 1.30E-72 | -1.69E-46 |
MS.gene058419 | MS.gene62848 | 0.920883 | 7.27E-88 | -1.69E-46 |
MS.gene058544 | MS.gene62848 | 0.908612 | 1.41E-81 | -1.69E-46 |
MS.gene058723 | MS.gene62848 | 0.857405 | 1.67E-62 | -1.69E-46 |
MS.gene058773 | MS.gene62848 | 0.903057 | 5.14E-79 | -1.69E-46 |
MS.gene058838 | MS.gene62848 | 0.896069 | 5.25E-76 | -1.69E-46 |
MS.gene05883 | MS.gene62848 | 0.844704 | 6.41E-59 | -1.69E-46 |
MS.gene059022 | MS.gene62848 | 0.896972 | 2.21E-76 | -1.69E-46 |
MS.gene059023 | MS.gene62848 | 0.908146 | 2.35E-81 | -1.69E-46 |
MS.gene059029 | MS.gene62848 | 0.861755 | 8.21E-64 | -1.69E-46 |
MS.gene059079 | MS.gene62848 | 0.812288 | 4.57E-51 | -1.69E-46 |
MS.gene05912 | MS.gene62848 | 0.809669 | 1.69E-50 | -1.69E-46 |
MS.gene05913 | MS.gene62848 | 0.824934 | 6.17E-54 | -1.69E-46 |
MS.gene05914 | MS.gene62848 | 0.852411 | 4.70E-61 | -1.69E-46 |
MS.gene05934 | MS.gene62848 | 0.872041 | 4.31E-67 | -1.69E-46 |
MS.gene059526 | MS.gene62848 | -0.826566 | 2.53E-54 | -1.69E-46 |
MS.gene059536 | MS.gene62848 | 0.873703 | 1.20E-67 | -1.69E-46 |
MS.gene059667 | MS.gene62848 | 0.821644 | 3.62E-53 | -1.69E-46 |
MS.gene059677 | MS.gene62848 | 0.919021 | 7.57E-87 | -1.69E-46 |
MS.gene059718 | MS.gene62848 | 0.926554 | 4.00E-91 | -1.69E-46 |
MS.gene059756 | MS.gene62848 | 0.872315 | 3.49E-67 | -1.69E-46 |
MS.gene059801 | MS.gene62848 | 0.875349 | 3.30E-68 | -1.69E-46 |
MS.gene059865 | MS.gene62848 | 0.862341 | 5.43E-64 | -1.69E-46 |
MS.gene059902 | MS.gene62848 | 0.881108 | 3.16E-70 | -1.69E-46 |
MS.gene059960 | MS.gene62848 | 0.872089 | 4.16E-67 | -1.69E-46 |
MS.gene060193 | MS.gene62848 | 0.849695 | 2.74E-60 | -1.69E-46 |
MS.gene060482 | MS.gene62848 | 0.835431 | 1.68E-56 | -1.69E-46 |
MS.gene060703 | MS.gene62848 | 0.841456 | 4.70E-58 | -1.69E-46 |
MS.gene060762 | MS.gene62848 | 0.897281 | 1.64E-76 | -1.69E-46 |
MS.gene060778 | MS.gene62848 | 0.807962 | 3.91E-50 | -1.69E-46 |
MS.gene06077 | MS.gene62848 | 0.884014 | 2.75E-71 | -1.69E-46 |
MS.gene060804 | MS.gene62848 | 0.829711 | 4.42E-55 | -1.69E-46 |
MS.gene060818 | MS.gene62848 | 0.816673 | 4.90E-52 | -1.69E-46 |
MS.gene060835 | MS.gene62848 | 0.843323 | 1.50E-58 | -1.69E-46 |
MS.gene060837 | MS.gene62848 | 0.806876 | 6.65E-50 | -1.69E-46 |
MS.gene06092 | MS.gene62848 | 0.930551 | 1.39E-93 | -1.69E-46 |
MS.gene060982 | MS.gene62848 | 0.856357 | 3.40E-62 | -1.69E-46 |
MS.gene061041 | MS.gene62848 | 0.811896 | 5.56E-51 | -1.69E-46 |
MS.gene061134 | MS.gene62848 | 0.813298 | 2.75E-51 | -1.69E-46 |
MS.gene061150 | MS.gene62848 | 0.932948 | 3.95E-95 | -1.69E-46 |
MS.gene061171 | MS.gene62848 | 0.815524 | 8.84E-52 | -1.69E-46 |
MS.gene061200 | MS.gene62848 | 0.865839 | 4.41E-65 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62848.t1 | MTR_4g102000 | 96.861 | 223 | 7 | 0 | 6 | 228 | 98 | 320 | 3.64e-162 | 451 |
MS.gene62848.t1 | MTR_0002s0730 | 43.005 | 193 | 109 | 1 | 17 | 208 | 1 | 193 | 7.18e-52 | 167 |
MS.gene62848.t1 | MTR_4g034690 | 37.306 | 193 | 120 | 1 | 17 | 208 | 1 | 193 | 3.50e-48 | 157 |
MS.gene62848.t1 | MTR_7g109610 | 37.629 | 194 | 116 | 1 | 21 | 209 | 86 | 279 | 1.45e-41 | 143 |
MS.gene62848.t1 | MTR_4g075100 | 34.061 | 229 | 139 | 5 | 3 | 225 | 15 | 237 | 1.11e-40 | 139 |
MS.gene62848.t1 | MTR_1g086940 | 36.683 | 199 | 118 | 2 | 19 | 209 | 84 | 282 | 1.22e-40 | 141 |
MS.gene62848.t1 | MTR_7g082980 | 36.126 | 191 | 122 | 0 | 34 | 224 | 75 | 265 | 5.84e-39 | 136 |
MS.gene62848.t1 | MTR_5g026840 | 34.884 | 172 | 112 | 0 | 38 | 209 | 88 | 259 | 5.02e-36 | 129 |
MS.gene62848.t1 | MTR_4g069800 | 32.683 | 205 | 131 | 3 | 6 | 210 | 74 | 271 | 1.13e-32 | 119 |
MS.gene62848.t1 | MTR_4g069800 | 33.333 | 165 | 110 | 0 | 45 | 209 | 74 | 238 | 1.07e-29 | 111 |
MS.gene62848.t1 | MTR_4g099360 | 35.638 | 188 | 113 | 1 | 38 | 217 | 104 | 291 | 2.15e-27 | 106 |
MS.gene62848.t1 | MTR_4g069800 | 33.333 | 171 | 105 | 4 | 6 | 174 | 74 | 237 | 6.20e-25 | 98.6 |
MS.gene62848.t1 | MTR_1g106550 | 31.148 | 183 | 116 | 2 | 38 | 210 | 155 | 337 | 3.08e-21 | 90.9 |
MS.gene62848.t1 | MTR_7g112640 | 31.746 | 189 | 116 | 4 | 47 | 222 | 119 | 307 | 3.94e-21 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62848.t1 | AT1G12410 | 71.946 | 221 | 62 | 0 | 8 | 228 | 59 | 279 | 2.62e-124 | 353 |
MS.gene62848.t1 | ATCG00670 | 41.451 | 193 | 112 | 1 | 17 | 208 | 1 | 193 | 1.10e-54 | 174 |
MS.gene62848.t1 | AT5G23140 | 36.041 | 197 | 121 | 2 | 24 | 218 | 37 | 230 | 6.55e-43 | 145 |
MS.gene62848.t1 | AT1G02560 | 38.660 | 194 | 114 | 1 | 21 | 209 | 92 | 285 | 3.87e-42 | 145 |
MS.gene62848.t1 | AT5G45390 | 36.628 | 172 | 109 | 0 | 38 | 209 | 79 | 250 | 6.36e-37 | 131 |
MS.gene62848.t1 | AT1G66670 | 33.514 | 185 | 120 | 1 | 25 | 209 | 75 | 256 | 2.49e-36 | 130 |
MS.gene62848.t1 | AT4G17040 | 33.028 | 218 | 132 | 2 | 8 | 217 | 81 | 292 | 1.23e-35 | 128 |
MS.gene62848.t1 | AT1G11750 | 34.682 | 173 | 113 | 0 | 37 | 209 | 95 | 267 | 8.93e-35 | 125 |
MS.gene62848.t1 | AT1G11750 | 34.682 | 173 | 113 | 0 | 37 | 209 | 113 | 285 | 1.71e-34 | 125 |
MS.gene62848.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 38 | 209 | 121 | 303 | 2.29e-26 | 104 |
MS.gene62848.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 38 | 209 | 121 | 303 | 2.29e-26 | 104 |
MS.gene62848.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 38 | 209 | 121 | 303 | 5.55e-26 | 103 |
MS.gene62848.t1 | AT1G49970 | 34.066 | 182 | 110 | 2 | 38 | 209 | 171 | 352 | 3.47e-23 | 96.7 |
Find 60 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTATCAATGGGTTGATTTA+TGG | 0.126424 | 8.4:+22937629 | MS.gene62848:CDS |
GCACAAGAGGCCCTTGACTA+TGG | 0.268943 | 8.4:+22939612 | MS.gene62848:CDS |
ATCCGAATTTGTGCCCTTAC+TGG | 0.280153 | 8.4:-22937556 | None:intergenic |
AAGCTCTACTTGTACATTAA+TGG | 0.307990 | 8.4:+22937940 | MS.gene62848:CDS |
TCCTTCACCAGGTGTTCTAT+AGG | 0.314306 | 8.4:-22937605 | None:intergenic |
AGAATTTAGCAATCAAATAT+TGG | 0.329049 | 8.4:+22937879 | MS.gene62848:CDS |
AATGTACAAGTAGAGCTTCT+TGG | 0.334034 | 8.4:-22937935 | None:intergenic |
CCTTCACCAGGTGTTCTATA+GGG | 0.336685 | 8.4:-22937604 | None:intergenic |
CCTCGCAAGGATGCTGGCTC+AGG | 0.377210 | 8.4:+22939681 | MS.gene62848:CDS |
CCTATATGCACCCATTGTAT+AGG | 0.399844 | 8.4:+22938137 | MS.gene62848:CDS |
TCTGAGTTGGCTAACAAAAC+AGG | 0.406372 | 8.4:+22939183 | MS.gene62848:CDS |
GAGCAGCTCCTGCTGGAGAT+TGG | 0.410929 | 8.4:-22938991 | None:intergenic |
GATGCACCTCGCAAGGATGC+TGG | 0.413454 | 8.4:+22939675 | MS.gene62848:CDS |
AGCAGGAGCTGCTCGTGGTC+GGG | 0.415509 | 8.4:+22939000 | MS.gene62848:CDS |
AACCAGTAAGGGCACAAATT+CGG | 0.415853 | 8.4:+22937554 | MS.gene62848:CDS |
CATTGTATAGGCCAAGCTTA+TGG | 0.426540 | 8.4:+22938149 | MS.gene62848:CDS |
CCTATACAATGGGTGCATAT+AGG | 0.431234 | 8.4:-22938137 | None:intergenic |
AGATCACCGAAGACTTGAAA+AGG | 0.434233 | 8.4:+22939574 | MS.gene62848:intron |
CGACCACGAGCAGCTCCTGC+TGG | 0.449924 | 8.4:-22938998 | None:intergenic |
CAGCAGGAGCTGCTCGTGGT+CGG | 0.460713 | 8.4:+22938999 | MS.gene62848:CDS |
TACTTGTACATTAATGGTCC+TGG | 0.468494 | 8.4:+22937946 | MS.gene62848:CDS |
GCAGCATTTCTACTTGCAGC+TGG | 0.472807 | 8.4:+22938176 | MS.gene62848:CDS |
AGTGAACTGACCTTCTCAAC+AGG | 0.482520 | 8.4:-22939210 | None:intergenic |
AAGGATGCTGGCTCAGGCAT+TGG | 0.507073 | 8.4:+22939687 | MS.gene62848:CDS |
ATAAGCTTGGCCTATACAAT+GGG | 0.511333 | 8.4:-22938147 | None:intergenic |
CTGGTGAAGGAACTTATCAA+TGG | 0.511648 | 8.4:+22937617 | MS.gene62848:CDS |
CACAAGAGGCCCTTGACTAT+GGG | 0.513257 | 8.4:+22939613 | MS.gene62848:CDS |
GGTGTTCTATAGGGCACTCT+AGG | 0.519447 | 8.4:-22937595 | None:intergenic |
GGCTCATTGACAGAATTGTC+AGG | 0.528948 | 8.4:+22939634 | MS.gene62848:CDS |
CATAAGCTTGGCCTATACAA+TGG | 0.531992 | 8.4:-22938148 | None:intergenic |
CAAATTCGGATGATGCCCAT+TGG | 0.537610 | 8.4:+22937568 | MS.gene62848:CDS |
TGGTGAAGGAACTTATCAAT+GGG | 0.547080 | 8.4:+22937618 | MS.gene62848:CDS |
AACAGGCCAGCCTGTTGAGA+AGG | 0.549239 | 8.4:+22939200 | MS.gene62848:CDS |
ATGCTAACCAGAAACCAGTA+AGG | 0.549654 | 8.4:+22937542 | MS.gene62848:intron |
CATTGATAAGTTCCTTCACC+AGG | 0.553758 | 8.4:-22937616 | None:intergenic |
AAAAGCTGATGCACCTCGCA+AGG | 0.558743 | 8.4:+22939668 | MS.gene62848:CDS |
CGAGAACGTGTTATCTTCAT+CGG | 0.562508 | 8.4:+22937841 | MS.gene62848:CDS |
AACTGACCTTCTCAACAGGC+TGG | 0.565578 | 8.4:-22939206 | None:intergenic |
GGGCACTCTAGGAGTTCCAA+TGG | 0.565955 | 8.4:-22937584 | None:intergenic |
TCTACTTGCAGCTGGAGAGA+AGG | 0.566048 | 8.4:+22938184 | MS.gene62848:CDS |
CCCTATAGAACACCTGGTGA+AGG | 0.567690 | 8.4:+22937604 | MS.gene62848:CDS |
GATCACCGAAGACTTGAAAA+GGG | 0.568998 | 8.4:+22939575 | MS.gene62848:intron |
TGTCAATGAGCCCATAGTCA+AGG | 0.569550 | 8.4:-22939623 | None:intergenic |
ATGCTGCAAGACCATAAGCT+TGG | 0.573039 | 8.4:-22938160 | None:intergenic |
CCTGAGCCAGCATCCTTGCG+AGG | 0.577721 | 8.4:-22939681 | None:intergenic |
TCTCCAGCAGGAGCTGCTCG+TGG | 0.586081 | 8.4:+22938995 | MS.gene62848:CDS |
TGGAGAACAATTCTTGCAAG+AGG | 0.588103 | 8.4:-22938971 | None:intergenic |
GTCAATGAGCCCATAGTCAA+GGG | 0.588285 | 8.4:-22939622 | None:intergenic |
TTGACAGAATTGTCAGGCCA+CGG | 0.588957 | 8.4:+22939640 | MS.gene62848:CDS |
ATTGTTCTCCAATCTCCAGC+AGG | 0.591740 | 8.4:+22938983 | MS.gene62848:CDS |
GGCACTCTAGGAGTTCCAAT+GGG | 0.595604 | 8.4:-22937583 | None:intergenic |
TGTACATTAATGGTCCTGGT+GGG | 0.599482 | 8.4:+22937950 | MS.gene62848:CDS |
AGAGTGCCCTATAGAACACC+TGG | 0.609227 | 8.4:+22937598 | MS.gene62848:CDS |
AGGAGTCTGCAAGCTTTGCA+TGG | 0.619828 | 8.4:-22938117 | None:intergenic |
AAAACGATTTGATGCACAAG+AGG | 0.623503 | 8.4:+22939599 | MS.gene62848:CDS |
TTGTACATTAATGGTCCTGG+TGG | 0.642823 | 8.4:+22937949 | MS.gene62848:CDS |
GTACATTAATGGTCCTGGTG+GGG | 0.651895 | 8.4:+22937951 | MS.gene62848:CDS |
TCATTACTTACATCCCCACC+AGG | 0.676936 | 8.4:-22937964 | None:intergenic |
TGCTAACCAGAAACCAGTAA+GGG | 0.683549 | 8.4:+22937543 | MS.gene62848:intron |
GTATCGTAGAGAGACATGCA+TGG | 0.715789 | 8.4:-22938095 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGTTCTTGAAAAATATT+TGG | + | chr8.4:22939337-22939356 | MS.gene62848:intron | 15.0% |
!! | AAATTGAATTGAAAAATTTG+TGG | - | chr8.4:22936231-22936250 | None:intergenic | 15.0% |
!! | AAGAATGAAATTAAGAAAAT+GGG | - | chr8.4:22936345-22936364 | None:intergenic | 15.0% |
!! | AATTGAATTGAAAAATTTGT+GGG | - | chr8.4:22936230-22936249 | None:intergenic | 15.0% |
!! | CTATAAATATAATACATGTT+AGG | - | chr8.4:22938580-22938599 | None:intergenic | 15.0% |
!!! | AAATCTGTTTTAATCATTTA+AGG | - | chr8.4:22936003-22936022 | None:intergenic | 15.0% |
!!! | ACTCATTTTTTTAGAAAAAA+TGG | + | chr8.4:22936775-22936794 | MS.gene62848:intron | 15.0% |
!!! | TAGAAAAAATGGATTTTTAT+GGG | + | chr8.4:22936786-22936805 | MS.gene62848:intron | 15.0% |
!!! | TATGATTGGTATTTTTTTTA+AGG | + | chr8.4:22937132-22937151 | MS.gene62848:intron | 15.0% |
!!! | TTAGAAAAAATGGATTTTTA+TGG | + | chr8.4:22936785-22936804 | MS.gene62848:intron | 15.0% |
!! | AATATTAAACTAGAAACAAG+AGG | - | chr8.4:22938020-22938039 | None:intergenic | 20.0% |
!! | AATCATAATATTTAACACCA+CGG | - | chr8.4:22937119-22937138 | None:intergenic | 20.0% |
!! | AGAATTTAGCAATCAAATAT+TGG | + | chr8.4:22937879-22937898 | MS.gene62848:CDS | 20.0% |
!! | GAAGAATGAAATTAAGAAAA+TGG | - | chr8.4:22936346-22936365 | None:intergenic | 20.0% |
!! | GTAATATTCTGTTGTATTAA+GGG | + | chr8.4:22938932-22938951 | MS.gene62848:intron | 20.0% |
!! | GTATGTTAAAATGAAAAAGT+TGG | + | chr8.4:22938654-22938673 | MS.gene62848:intron | 20.0% |
!! | TAAAAAGATTTCCTACATTA+CGG | + | chr8.4:22938303-22938322 | MS.gene62848:intron | 20.0% |
!! | TAAGTAATGATTCTAATGTT+TGG | + | chr8.4:22937977-22937996 | MS.gene62848:intron | 20.0% |
!! | TACCTAAAAACATAAAAGTT+TGG | - | chr8.4:22937523-22937542 | None:intergenic | 20.0% |
!! | TGTAATATTCTGTTGTATTA+AGG | + | chr8.4:22938931-22938950 | MS.gene62848:intron | 20.0% |
!! | TTATATATAACCACAAAAGA+AGG | + | chr8.4:22938512-22938531 | MS.gene62848:intron | 20.0% |
!!! | ATCTATTTTTTTCAACAACA+AGG | + | chr8.4:22936729-22936748 | MS.gene62848:intron | 20.0% |
!!! | TCATAATGAGTTTTATTTAC+TGG | + | chr8.4:22939525-22939544 | MS.gene62848:intron | 20.0% |
!!! | TCATTTTTAAGTGTTTGTTT+TGG | + | chr8.4:22936627-22936646 | MS.gene62848:intron | 20.0% |
!!! | TTTTTTTGTTAATTTCCTGT+TGG | + | chr8.4:22936973-22936992 | MS.gene62848:intron | 20.0% |
! | AAAAAGATTTCCTACATTAC+GGG | + | chr8.4:22938304-22938323 | MS.gene62848:intron | 25.0% |
! | AATTAACTCAAGTCAATTTG+TGG | + | chr8.4:22935898-22935917 | MS.gene62848:intron | 25.0% |
! | ACAAGGAGTAAAAAAAAATC+AGG | - | chr8.4:22935941-22935960 | None:intergenic | 25.0% |
! | ATCAGCAAGTAATTGATTAT+GGG | + | chr8.4:22936542-22936561 | MS.gene62848:intron | 25.0% |
! | ATGATCCTTAATCATATTTG+TGG | - | chr8.4:22938439-22938458 | None:intergenic | 25.0% |
! | ATTCTCAATATAATCAAGGA+TGG | + | chr8.4:22938348-22938367 | MS.gene62848:intron | 25.0% |
! | TATCAGCAAGTAATTGATTA+TGG | + | chr8.4:22936541-22936560 | MS.gene62848:intron | 25.0% |
! | TCCTAAAATGAAAAGCTATT+AGG | + | chr8.4:22936690-22936709 | MS.gene62848:intron | 25.0% |
! | TGTGACATTCATTTCTAAAT+TGG | + | chr8.4:22938818-22938837 | MS.gene62848:intron | 25.0% |
! | TTGCATTCTCAATATAATCA+AGG | + | chr8.4:22938344-22938363 | MS.gene62848:intron | 25.0% |
! | TTTCCATAATTTCAAACTAC+CGG | - | chr8.4:22938685-22938704 | None:intergenic | 25.0% |
!! | AAAGTACCTGAAATTGAAAA+CGG | - | chr8.4:22936406-22936425 | None:intergenic | 25.0% |
!! | GAATTTAACTTCATCTACAA+AGG | - | chr8.4:22939367-22939386 | None:intergenic | 25.0% |
!! | GTGGTGTTAAATATTATGAT+TGG | + | chr8.4:22937118-22937137 | MS.gene62848:intron | 25.0% |
!! | TATTTGGAATAAGATTGTGA+TGG | - | chr8.4:22938770-22938789 | None:intergenic | 25.0% |
!! | TCCTAATAGCTTTTCATTTT+AGG | - | chr8.4:22936694-22936713 | None:intergenic | 25.0% |
!! | TGAAAGTATGGATTAAAACA+TGG | + | chr8.4:22937390-22937409 | MS.gene62848:intron | 25.0% |
!! | TGCCAAACTTTTATGTTTTT+AGG | + | chr8.4:22937518-22937537 | MS.gene62848:intron | 25.0% |
!!! | AATGTAAACTCTCAGTTTTT+TGG | + | chr8.4:22936448-22936467 | MS.gene62848:intron | 25.0% |
!!! | ATTATTATTTTCGGATTAGC+AGG | + | chr8.4:22937057-22937076 | MS.gene62848:intron | 25.0% |
!!! | GTTTTAATCCATACTTTCAT+TGG | - | chr8.4:22937389-22937408 | None:intergenic | 25.0% |
!!! | GTTTTTTGGTAAAGTTAACA+AGG | + | chr8.4:22936462-22936481 | MS.gene62848:intron | 25.0% |
!!! | TATTTTTTTCAACAACAAGG+AGG | + | chr8.4:22936732-22936751 | MS.gene62848:intron | 25.0% |
!!! | TCACTTTAAAATGGAATTCA+TGG | + | chr8.4:22939228-22939247 | MS.gene62848:intron | 25.0% |
!!! | TCTTAGAGTTCATTTTTTCA+TGG | + | chr8.4:22939485-22939504 | MS.gene62848:intron | 25.0% |
!!! | TTTCGAGTTAATTCTAAACA+AGG | - | chr8.4:22935958-22935977 | None:intergenic | 25.0% |
!!! | TTTTCAATTTCAGGTACTTT+TGG | + | chr8.4:22936406-22936425 | MS.gene62848:intron | 25.0% |
AAAACATGGTTTATGTCACT+TGG | + | chr8.4:22937404-22937423 | MS.gene62848:intron | 30.0% | |
AAAAGACGAAAATAAACTCG+AGG | - | chr8.4:22937776-22937795 | None:intergenic | 30.0% | |
AACATTGTGAAAACTCTTTC+AGG | + | chr8.4:22939104-22939123 | MS.gene62848:intron | 30.0% | |
AAGCTCTACTTGTACATTAA+TGG | + | chr8.4:22937940-22937959 | MS.gene62848:CDS | 30.0% | |
AAGTTAAACTTGTCATAGCA+CGG | + | chr8.4:22938245-22938264 | MS.gene62848:intron | 30.0% | |
AAGTTGTATTAACAGACAGT+GGG | - | chr8.4:22938221-22938240 | None:intergenic | 30.0% | |
AATGAAGCTTAGATATCGAA+AGG | - | chr8.4:22939426-22939445 | None:intergenic | 30.0% | |
ATCCTTAATCATATTTGTGG+TGG | - | chr8.4:22938436-22938455 | None:intergenic | 30.0% | |
ATGATCATTCATGACAGTTA+AGG | - | chr8.4:22938608-22938627 | None:intergenic | 30.0% | |
CAAGATGTAACAACTTACAA+GGG | - | chr8.4:22937659-22937678 | None:intergenic | 30.0% | |
CATACAGAGAAGAAGTTATT+TGG | - | chr8.4:22939314-22939333 | None:intergenic | 30.0% | |
GTAATGATTCTAATGTTTGG+TGG | + | chr8.4:22937980-22937999 | MS.gene62848:intron | 30.0% | |
GTATAAAGTCCATTCAACAA+AGG | - | chr8.4:22938374-22938393 | None:intergenic | 30.0% | |
GTTAAAATGAAAAAGTTGGC+AGG | + | chr8.4:22938658-22938677 | MS.gene62848:intron | 30.0% | |
TACATAGATATCTCTTCTGT+AGG | - | chr8.4:22938400-22938419 | None:intergenic | 30.0% | |
TCAAGATGTAACAACTTACA+AGG | - | chr8.4:22937660-22937679 | None:intergenic | 30.0% | |
TCCTTAATCATATTTGTGGT+GGG | - | chr8.4:22938435-22938454 | None:intergenic | 30.0% | |
TGACATCTATCTCAGAAAAA+AGG | - | chr8.4:22939034-22939053 | None:intergenic | 30.0% | |
TGTATAATACCAGTGACATA+GGG | - | chr8.4:22936920-22936939 | None:intergenic | 30.0% | |
TTAAATAGCTGATCGTCAAA+AGG | - | chr8.4:22938043-22938062 | None:intergenic | 30.0% | |
TTAACAAGGTTCTCAATTTC+AGG | + | chr8.4:22936476-22936495 | MS.gene62848:intron | 30.0% | |
TTCTTTGACCAATGAAAGTA+TGG | + | chr8.4:22937378-22937397 | MS.gene62848:intron | 30.0% | |
! | AAACATGGTTTATGTCACTT+GGG | + | chr8.4:22937405-22937424 | MS.gene62848:intron | 30.0% |
! | AAACTCATTTCCTTCTTTTG+TGG | - | chr8.4:22938525-22938544 | None:intergenic | 30.0% |
! | AAGGTCAGTTCACTTTAAAA+TGG | + | chr8.4:22939219-22939238 | MS.gene62848:intron | 30.0% |
! | AGATTATCTTTTCTCTGAGT+TGG | + | chr8.4:22939170-22939189 | MS.gene62848:CDS | 30.0% |
! | ATCACAAATGTAATTTTGCG+AGG | + | chr8.4:22937340-22937359 | MS.gene62848:intron | 30.0% |
!! | CTTATCAATGGGTTGATTTA+TGG | + | chr8.4:22937629-22937648 | MS.gene62848:CDS | 30.0% |
!! | GAACTCTAAGATACACAAAA+TGG | - | chr8.4:22939476-22939495 | None:intergenic | 30.0% |
!! | GTCAATTTGTGGATTTGTTT+TGG | + | chr8.4:22935909-22935928 | MS.gene62848:intron | 30.0% |
!!! | TTTTACCCTTTTCAAGTCTT+CGG | - | chr8.4:22939583-22939602 | None:intergenic | 30.0% |
AAAACGATTTGATGCACAAG+AGG | + | chr8.4:22939599-22939618 | MS.gene62848:CDS | 35.0% | |
AAATGACATCTTACTCCTTG+TGG | + | chr8.4:22936057-22936076 | MS.gene62848:intron | 35.0% | |
AATGTACAAGTAGAGCTTCT+TGG | - | chr8.4:22937938-22937957 | None:intergenic | 35.0% | |
AATGTCACAACAAAGCAGAA+TGG | - | chr8.4:22938807-22938826 | None:intergenic | 35.0% | |
AGTCAAAGACTCAATACTAC+AGG | - | chr8.4:22938867-22938886 | None:intergenic | 35.0% | |
AGTTAAACTTGTCATAGCAC+GGG | + | chr8.4:22938246-22938265 | MS.gene62848:intron | 35.0% | |
ATAAGCTTGGCCTATACAAT+GGG | - | chr8.4:22938150-22938169 | None:intergenic | 35.0% | |
ATCTATCTCAGAAAAAAGGC+AGG | - | chr8.4:22939030-22939049 | None:intergenic | 35.0% | |
ATGATATTTGTCGCGAGAAA+TGG | + | chr8.4:22937158-22937177 | MS.gene62848:intron | 35.0% | |
CAAGTTGTATTAACAGACAG+TGG | - | chr8.4:22938222-22938241 | None:intergenic | 35.0% | |
CCTTAATCATATTTGTGGTG+GGG | - | chr8.4:22938434-22938453 | None:intergenic | 35.0% | |
GTGTATAATACCAGTGACAT+AGG | - | chr8.4:22936921-22936940 | None:intergenic | 35.0% | |
TAACTGATTAAGATCTCTCC+TGG | - | chr8.4:22937257-22937276 | None:intergenic | 35.0% | |
TAATTAGTTGCTTCCCAAGA+GGG | + | chr8.4:22937223-22937242 | MS.gene62848:intron | 35.0% | |
TACTTGTACATTAATGGTCC+TGG | + | chr8.4:22937946-22937965 | MS.gene62848:CDS | 35.0% | |
TGAAGATTGGAGTTTCAATC+CGG | - | chr8.4:22936316-22936335 | None:intergenic | 35.0% | |
TGATATTTGTCGCGAGAAAT+GGG | + | chr8.4:22937159-22937178 | MS.gene62848:intron | 35.0% | |
TGGTGAAGGAACATAGTAAT+GGG | + | chr8.4:22937716-22937735 | MS.gene62848:intron | 35.0% | |
TGGTGAAGGAACTTATCAAT+GGG | + | chr8.4:22937618-22937637 | MS.gene62848:CDS | 35.0% | |
TTGTACGCTTATCTAAGAAC+TGG | + | chr8.4:22937696-22937715 | MS.gene62848:intron | 35.0% | |
! | AGGTTCTCAATTTCAGGTAA+TGG | + | chr8.4:22936482-22936501 | MS.gene62848:intron | 35.0% |
! | CATTCACCGTTTTCAATTTC+AGG | + | chr8.4:22936397-22936416 | MS.gene62848:intron | 35.0% |
! | GATACATTTTTCCTAGATGC+TGG | + | chr8.4:22937020-22937039 | MS.gene62848:intron | 35.0% |
! | GGTTCTCAATTTCAGGTAAT+GGG | + | chr8.4:22936483-22936502 | MS.gene62848:intron | 35.0% |
! | GTTACTTTATGACGTAGTCA+TGG | + | chr8.4:22937738-22937757 | MS.gene62848:intron | 35.0% |
! | TTGAGTCTTTGACTTCTCTA+AGG | + | chr8.4:22938873-22938892 | MS.gene62848:intron | 35.0% |
! | TTTCAATCCGGAGTAGATTT+TGG | - | chr8.4:22936304-22936323 | None:intergenic | 35.0% |
! | TTTTGGTGGAAACACTGAAA+TGG | - | chr8.4:22936287-22936306 | None:intergenic | 35.0% |
!! | AATTTCAGGTAATGGGTTGT+GGG | + | chr8.4:22936490-22936509 | MS.gene62848:intron | 35.0% |
!! | CAATTGACTCTGCTTTTACA+AGG | + | chr8.4:22939386-22939405 | MS.gene62848:intron | 35.0% |
!! | CTTTAATTTGTGAGTCCTTC+AGG | + | chr8.4:22937278-22937297 | MS.gene62848:intron | 35.0% |
!!! | TGTGTTTTGAAACTTCCACA+AGG | - | chr8.4:22936075-22936094 | None:intergenic | 35.0% |
AAGCAGAATGGAGTACAAAG+CGG | - | chr8.4:22938795-22938814 | None:intergenic | 40.0% | |
AATGAAAAAGTTGGCAGGTC+CGG | + | chr8.4:22938663-22938682 | MS.gene62848:intron | 40.0% | |
AATGATTGCTTCCAGCATCT+AGG | - | chr8.4:22937034-22937053 | None:intergenic | 40.0% | |
ACATGTTAGGTACTCACCTT+TGG | - | chr8.4:22938567-22938586 | None:intergenic | 40.0% | |
ACCTAGGAGGAGAATAAACA+CGG | - | chr8.4:22936192-22936211 | None:intergenic | 40.0% | |
AGATCACCGAAGACTTGAAA+AGG | + | chr8.4:22939574-22939593 | MS.gene62848:intron | 40.0% | |
ATGCTAACCAGAAACCAGTA+AGG | + | chr8.4:22937542-22937561 | MS.gene62848:intron | 40.0% | |
ATTGTGTGAGATTACCTAGG+AGG | - | chr8.4:22936205-22936224 | None:intergenic | 40.0% | |
CATAAGCTTGGCCTATACAA+TGG | - | chr8.4:22938151-22938170 | None:intergenic | 40.0% | |
CATTGATAAGTTCCTTCACC+AGG | - | chr8.4:22937619-22937638 | None:intergenic | 40.0% | |
CATTGTATAGGCCAAGCTTA+TGG | + | chr8.4:22938149-22938168 | MS.gene62848:CDS | 40.0% | |
CCCCACCACAAATATGATTA+AGG | + | chr8.4:22938431-22938450 | MS.gene62848:intron | 40.0% | |
CCTATACAATGGGTGCATAT+AGG | - | chr8.4:22938140-22938159 | None:intergenic | 40.0% | |
CCTATATGCACCCATTGTAT+AGG | + | chr8.4:22938137-22938156 | MS.gene62848:CDS | 40.0% | |
CGAGAACGTGTTATCTTCAT+CGG | + | chr8.4:22937841-22937860 | MS.gene62848:CDS | 40.0% | |
CTAATTAGTTGCTTCCCAAG+AGG | + | chr8.4:22937222-22937241 | MS.gene62848:intron | 40.0% | |
CTGGTGAAGGAACATAGTAA+TGG | + | chr8.4:22937715-22937734 | MS.gene62848:intron | 40.0% | |
CTGGTGAAGGAACTTATCAA+TGG | + | chr8.4:22937617-22937636 | MS.gene62848:CDS | 40.0% | |
GAGATTGTGTGAGATTACCT+AGG | - | chr8.4:22936208-22936227 | None:intergenic | 40.0% | |
GATCACCGAAGACTTGAAAA+GGG | + | chr8.4:22939575-22939594 | MS.gene62848:intron | 40.0% | |
GCTTATCTAAGAACTGGTGA+AGG | + | chr8.4:22937702-22937721 | MS.gene62848:intron | 40.0% | |
GGAGTACAAAGCGGAATATT+TGG | - | chr8.4:22938786-22938805 | None:intergenic | 40.0% | |
GTTAAACTTGTCATAGCACG+GGG | + | chr8.4:22938247-22938266 | MS.gene62848:intron | 40.0% | |
GTTTCCACCAAAATCTACTC+CGG | + | chr8.4:22936294-22936313 | MS.gene62848:intron | 40.0% | |
TCTTCGGTGATCTGAAGATA+TGG | - | chr8.4:22939567-22939586 | None:intergenic | 40.0% | |
TGCTAACCAGAAACCAGTAA+GGG | + | chr8.4:22937543-22937562 | MS.gene62848:intron | 40.0% | |
TGGAGAACAATTCTTGCAAG+AGG | - | chr8.4:22938974-22938993 | None:intergenic | 40.0% | |
TGTACATTAATGGTCCTGGT+GGG | + | chr8.4:22937950-22937969 | MS.gene62848:CDS | 40.0% | |
TTGTACATTAATGGTCCTGG+TGG | + | chr8.4:22937949-22937968 | MS.gene62848:CDS | 40.0% | |
! | AACCAGTAAGGGCACAAATT+CGG | + | chr8.4:22937554-22937573 | MS.gene62848:CDS | 40.0% |
! | CAAAAGCATAAGTGGTAGCA+CGG | + | chr8.4:22937186-22937205 | MS.gene62848:intron | 40.0% |
! | CAATCGACAGTTGATATTGC+TGG | - | chr8.4:22938635-22938654 | None:intergenic | 40.0% |
! | GATTATGGGTGCGTTTGTTT+TGG | + | chr8.4:22936556-22936575 | MS.gene62848:intron | 40.0% |
! | GGTCCGGTAGTTTGAAATTA+TGG | + | chr8.4:22938679-22938698 | MS.gene62848:intron | 40.0% |
! | TCTGAGTTGGCTAACAAAAC+AGG | + | chr8.4:22939183-22939202 | MS.gene62848:CDS | 40.0% |
!! | CAATTTCAGGTAATGGGTTG+TGG | + | chr8.4:22936489-22936508 | MS.gene62848:intron | 40.0% |
AAATGGGCACACGTGAAGAT+TGG | - | chr8.4:22936329-22936348 | None:intergenic | 45.0% | |
AAGGAATGGGAGACAAACAG+CGG | - | chr8.4:22936114-22936133 | None:intergenic | 45.0% | |
AGTGAACTGACCTTCTCAAC+AGG | - | chr8.4:22939213-22939232 | None:intergenic | 45.0% | |
ATAAACACGGGGGGTTGAAA+CGG | - | chr8.4:22936179-22936198 | None:intergenic | 45.0% | |
ATCCGAATTTGTGCCCTTAC+TGG | - | chr8.4:22937559-22937578 | None:intergenic | 45.0% | |
ATGCTGCAAGACCATAAGCT+TGG | - | chr8.4:22938163-22938182 | None:intergenic | 45.0% | |
ATTGTTCTCCAATCTCCAGC+AGG | + | chr8.4:22938983-22939002 | MS.gene62848:CDS | 45.0% | |
CAAATTCGGATGATGCCCAT+TGG | + | chr8.4:22937568-22937587 | MS.gene62848:CDS | 45.0% | |
CAAGGAGGTAACACATGTAC+AGG | + | chr8.4:22936747-22936766 | MS.gene62848:intron | 45.0% | |
CAAGGATGGCCTTTGTTGAA+TGG | + | chr8.4:22938362-22938381 | MS.gene62848:intron | 45.0% | |
CCATTGTGTTTGCATCCAAC+AGG | - | chr8.4:22936991-22937010 | None:intergenic | 45.0% | |
CCTAGGAGGAGAATAAACAC+GGG | - | chr8.4:22936191-22936210 | None:intergenic | 45.0% | |
CCTGTTGGATGCAAACACAA+TGG | + | chr8.4:22936988-22937007 | MS.gene62848:intron | 45.0% | |
CCTTCACCAGGTGTTCTATA+GGG | - | chr8.4:22937607-22937626 | None:intergenic | 45.0% | |
CTAGGAGGAGAATAAACACG+GGG | - | chr8.4:22936190-22936209 | None:intergenic | 45.0% | |
GGCTCATTGACAGAATTGTC+AGG | + | chr8.4:22939634-22939653 | MS.gene62848:CDS | 45.0% | |
GTACATTAATGGTCCTGGTG+GGG | + | chr8.4:22937951-22937970 | MS.gene62848:CDS | 45.0% | |
GTATCGTAGAGAGACATGCA+TGG | - | chr8.4:22938098-22938117 | None:intergenic | 45.0% | |
GTCAATGAGCCCATAGTCAA+GGG | - | chr8.4:22939625-22939644 | None:intergenic | 45.0% | |
TAGGAGGAGAATAAACACGG+GGG | - | chr8.4:22936189-22936208 | None:intergenic | 45.0% | |
TCATTACTTACATCCCCACC+AGG | - | chr8.4:22937967-22937986 | None:intergenic | 45.0% | |
TCCTACATTACGGGACTGTA+CGG | + | chr8.4:22938313-22938332 | MS.gene62848:intron | 45.0% | |
TCCTTCACCAGGTGTTCTAT+AGG | - | chr8.4:22937608-22937627 | None:intergenic | 45.0% | |
TGAACGACGATGGAAGGAAT+GGG | - | chr8.4:22936127-22936146 | None:intergenic | 45.0% | |
TGATTAAGATCTCTCCTGGC+CGG | - | chr8.4:22937253-22937272 | None:intergenic | 45.0% | |
TGTCAATGAGCCCATAGTCA+AGG | - | chr8.4:22939626-22939645 | None:intergenic | 45.0% | |
TTCTCTACTTCTGTCGCCAA+AGG | + | chr8.4:22938548-22938567 | MS.gene62848:intron | 45.0% | |
TTGACAGAATTGTCAGGCCA+CGG | + | chr8.4:22939640-22939659 | MS.gene62848:CDS | 45.0% | |
TTGTCATAGCACGGGGTTTA+AGG | + | chr8.4:22938254-22938273 | MS.gene62848:intron | 45.0% | |
! | CAATCCGGAGTAGATTTTGG+TGG | - | chr8.4:22936301-22936320 | None:intergenic | 45.0% |
! | TGGGATCGCAAAAGCATAAG+TGG | + | chr8.4:22937178-22937197 | MS.gene62848:intron | 45.0% |
!! | TTTGTGCCCTTACTGGTTTC+TGG | - | chr8.4:22937552-22937571 | None:intergenic | 45.0% |
!!! | ATCATTATTATTATTATTTT+CGG | + | chr8.4:22937048-22937067 | MS.gene62848:intron | 5.0% |
AAAAGCTGATGCACCTCGCA+AGG | + | chr8.4:22939668-22939687 | MS.gene62848:CDS | 50.0% | |
AACCACGATCGTGTTCGTAG+AGG | + | chr8.4:22937088-22937107 | MS.gene62848:intron | 50.0% | |
AACTGACCTTCTCAACAGGC+TGG | - | chr8.4:22939209-22939228 | None:intergenic | 50.0% | |
ACAAACGCACCCTATGTCAC+TGG | + | chr8.4:22936908-22936927 | MS.gene62848:intron | 50.0% | |
ACCGTACAGTCCCGTAATGT+AGG | - | chr8.4:22938317-22938336 | None:intergenic | 50.0% | |
AGGAGGAGAATAAACACGGG+GGG | - | chr8.4:22936188-22936207 | None:intergenic | 50.0% | |
AGGAGTCTGCAAGCTTTGCA+TGG | - | chr8.4:22938120-22938139 | None:intergenic | 50.0% | |
ATGGGAGACAAACAGCGGAT+AGG | - | chr8.4:22936109-22936128 | None:intergenic | 50.0% | |
CACAAGAGGCCCTTGACTAT+GGG | + | chr8.4:22939613-22939632 | MS.gene62848:CDS | 50.0% | |
CACGACAAACTGTCTCCTGA+AGG | - | chr8.4:22937296-22937315 | None:intergenic | 50.0% | |
CATGTTGAGGTGAACGACGA+TGG | - | chr8.4:22936137-22936156 | None:intergenic | 50.0% | |
CCCGTGTTTATTCTCCTCCT+AGG | + | chr8.4:22936188-22936207 | MS.gene62848:intron | 50.0% | |
CCCTATAGAACACCTGGTGA+AGG | + | chr8.4:22937604-22937623 | MS.gene62848:CDS | 50.0% | |
CGTCGTTCACCTCAACATGA+CGG | + | chr8.4:22936138-22936157 | MS.gene62848:intron | 50.0% | |
GCAGCATTTCTACTTGCAGC+TGG | + | chr8.4:22938176-22938195 | MS.gene62848:CDS | 50.0% | |
GTGAACGACGATGGAAGGAA+TGG | - | chr8.4:22936128-22936147 | None:intergenic | 50.0% | |
TCTACTTGCAGCTGGAGAGA+AGG | + | chr8.4:22938184-22938203 | MS.gene62848:CDS | 50.0% | |
TGGGAGACAAACAGCGGATA+GGG | - | chr8.4:22936108-22936127 | None:intergenic | 50.0% | |
TGTTCGTAGAGGACAAACCG+TGG | + | chr8.4:22937099-22937118 | MS.gene62848:intron | 50.0% | |
TTGAGGTGAACGACGATGGA+AGG | - | chr8.4:22936133-22936152 | None:intergenic | 50.0% | |
! | AGAGTGCCCTATAGAACACC+TGG | + | chr8.4:22937598-22937617 | MS.gene62848:CDS | 50.0% |
! | GGCACTCTAGGAGTTCCAAT+GGG | - | chr8.4:22937586-22937605 | None:intergenic | 50.0% |
! | GGTGTTCTATAGGGCACTCT+AGG | - | chr8.4:22937598-22937617 | None:intergenic | 50.0% |
! | TGCTTCCCAAGAGGGTTTTC+CGG | + | chr8.4:22937231-22937250 | MS.gene62848:intron | 50.0% |
AACAGGCCAGCCTGTTGAGA+AGG | + | chr8.4:22939200-22939219 | MS.gene62848:CDS | 55.0% | |
GCACAAGAGGCCCTTGACTA+TGG | + | chr8.4:22939612-22939631 | MS.gene62848:CDS | 55.0% | |
GGGGTTGAAACGGTCGTGTA+GGG | - | chr8.4:22936169-22936188 | None:intergenic | 55.0% | |
GGGTTGAAACGGTCGTGTAG+GGG | - | chr8.4:22936168-22936187 | None:intergenic | 55.0% | |
GGTTGAAACGGTCGTGTAGG+GGG | - | chr8.4:22936167-22936186 | None:intergenic | 55.0% | |
GTCCTCTACGAACACGATCG+TGG | - | chr8.4:22937093-22937112 | None:intergenic | 55.0% | |
! | GCATCAGCTTTTATGCGCCG+TGG | - | chr8.4:22939660-22939679 | None:intergenic | 55.0% |
! | GGGCACTCTAGGAGTTCCAA+TGG | - | chr8.4:22937587-22937606 | None:intergenic | 55.0% |
!! | AAGGATGCTGGCTCAGGCAT+TGG | + | chr8.4:22939687-22939706 | MS.gene62848:CDS | 55.0% |
CCTGGCCGGAAAACCCTCTT+GGG | - | chr8.4:22937239-22937258 | None:intergenic | 60.0% | |
GAGCAGCTCCTGCTGGAGAT+TGG | - | chr8.4:22938994-22939013 | None:intergenic | 60.0% | |
GATGCACCTCGCAAGGATGC+TGG | + | chr8.4:22939675-22939694 | MS.gene62848:CDS | 60.0% | |
GGGGGTTGAAACGGTCGTGT+AGG | - | chr8.4:22936170-22936189 | None:intergenic | 60.0% | |
TCCTGGCCGGAAAACCCTCT+TGG | - | chr8.4:22937240-22937259 | None:intergenic | 60.0% | |
AGCAGGAGCTGCTCGTGGTC+GGG | + | chr8.4:22939000-22939019 | MS.gene62848:CDS | 65.0% | |
AGGGGGCGACCGTCATGTTG+AGG | - | chr8.4:22936150-22936169 | None:intergenic | 65.0% | |
CAGCAGGAGCTGCTCGTGGT+CGG | + | chr8.4:22938999-22939018 | MS.gene62848:CDS | 65.0% | |
CCTGAGCCAGCATCCTTGCG+AGG | - | chr8.4:22939684-22939703 | None:intergenic | 65.0% | |
TCTCCAGCAGGAGCTGCTCG+TGG | + | chr8.4:22938995-22939014 | MS.gene62848:CDS | 65.0% | |
! | CCCAAGAGGGTTTTCCGGCC+AGG | + | chr8.4:22937236-22937255 | MS.gene62848:intron | 65.0% |
!! | CCTCGCAAGGATGCTGGCTC+AGG | + | chr8.4:22939681-22939700 | MS.gene62848:CDS | 65.0% |
CGACCACGAGCAGCTCCTGC+TGG | - | chr8.4:22939001-22939020 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 22935872 | 22939713 | 22935872 | ID=MS.gene62848 |
chr8.4 | mRNA | 22935872 | 22939713 | 22935872 | ID=MS.gene62848.t1;Parent=MS.gene62848 |
chr8.4 | exon | 22935872 | 22935892 | 22935872 | ID=MS.gene62848.t1.exon1;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22935872 | 22935892 | 22935872 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22937553 | 22937660 | 22937553 | ID=MS.gene62848.t1.exon2;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22937553 | 22937660 | 22937553 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22937838 | 22937975 | 22937838 | ID=MS.gene62848.t1.exon3;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22937838 | 22937975 | 22937838 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22938089 | 22938205 | 22938089 | ID=MS.gene62848.t1.exon4;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22938089 | 22938205 | 22938089 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22938953 | 22939021 | 22938953 | ID=MS.gene62848.t1.exon5;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22938953 | 22939021 | 22938953 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22939126 | 22939221 | 22939126 | ID=MS.gene62848.t1.exon6;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22939126 | 22939221 | 22939126 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
chr8.4 | exon | 22939576 | 22939713 | 22939576 | ID=MS.gene62848.t1.exon7;Parent=MS.gene62848.t1 |
chr8.4 | CDS | 22939576 | 22939713 | 22939576 | ID=cds.MS.gene62848.t1;Parent=MS.gene62848.t1 |
Gene Sequence |
Protein sequence |