Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050326.t1 | XP_003625810.1 | 97.1 | 273 | 8 | 0 | 1 | 273 | 132 | 404 | 1.40E-97 | 366.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050326.t1 | Q9SJN0 | 54.9 | 255 | 63 | 5 | 26 | 269 | 198 | 411 | 1.5e-44 | 181.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050326.t1 | G7L631 | 97.1 | 273 | 8 | 0 | 1 | 273 | 132 | 404 | 1.0e-97 | 366.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050326 | MS.gene050328 | 0.970503 | 1.02E-131 | -1.69E-46 |
| MS.gene050326 | MS.gene054270 | 0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene054941 | 0.802143 | 6.45E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene058382 | 0.841177 | 5.56E-58 | -1.69E-46 |
| MS.gene050326 | MS.gene05926 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene06421 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene066265 | 0.812237 | 4.69E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene072434 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene073297 | 0.801494 | 8.77E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene074380 | -0.80882 | 2.57E-50 | -1.69E-46 |
| MS.gene050326 | MS.gene24738 | 0.925538 | 1.60E-90 | -1.69E-46 |
| MS.gene050326 | MS.gene25516 | 0.81214 | 4.92E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene25726 | 0.804261 | 2.35E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene35795 | 0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene050326 | MS.gene36841 | 0.809682 | 1.68E-50 | -1.69E-46 |
| MS.gene050326 | MS.gene46636 | 0.803582 | 3.25E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene49165 | 0.803146 | 4.01E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene49425 | 0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene050326 | MS.gene50073 | 0.811982 | 5.33E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene54855 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene73893 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene74352 | 0.836769 | 7.71E-57 | -1.69E-46 |
| MS.gene050326 | MS.gene74358 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene76883 | 0.811475 | 6.87E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene77768 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene77774 | 0.821735 | 3.45E-53 | -1.69E-46 |
| MS.gene050326 | MS.gene80461 | 0.838969 | 2.10E-57 | -1.69E-46 |
| MS.gene050326 | MS.gene86229 | 0.801091 | 1.06E-48 | -1.69E-46 |
| MS.gene050326 | MS.gene91236 | 0.805851 | 1.09E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene93105 | 0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene050326 | MS.gene96335 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene050326 | MS.gene96836 | 0.802141 | 6.46E-49 | -1.69E-46 |
| MS.gene050326 | MS.gene99127 | 0.810759 | 9.83E-51 | -1.69E-46 |
| MS.gene050326 | MS.gene99603 | 0.800257 | 1.57E-48 | -1.69E-46 |
| MS.gene050326 | MS.gene99703 | 0.821869 | 3.21E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050326.t1 | MTR_7g104480 | 93.548 | 31 | 2 | 0 | 275 | 305 | 401 | 431 | 8.35e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 124 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTCGGGTGGTCAATT+TGG | 0.166727 | 7.2:-8327173 | MS.gene050326:CDS |
| GTTGGAGAGCCTTCGGGTTC+GGG | 0.231478 | 7.2:-8327377 | MS.gene050326:CDS |
| CAGGCTGCTTCATTTGCTAT+TGG | 0.248337 | 7.2:-8327467 | MS.gene050326:CDS |
| AGTTGGAGAGCCTTCGGGTT+CGG | 0.262820 | 7.2:-8327378 | MS.gene050326:CDS |
| GATGACATTGGAGGATTTCT+TGG | 0.268533 | 7.2:-8327630 | MS.gene050326:CDS |
| TGGTTAAAGCAGGGGTAGTT+AGG | 0.281516 | 7.2:-8327610 | MS.gene050326:CDS |
| GCCATTGTAGAGTTGTTATT+AGG | 0.296465 | 7.2:+8327491 | None:intergenic |
| CCGCCGCCAGCGGTTTGTTA+TGG | 0.308148 | 7.2:-8327302 | MS.gene050326:CDS |
| TGTGGCAGTGGCACAAACTA+TGG | 0.315000 | 7.2:-8327243 | MS.gene050326:CDS |
| ACCCCTCGACAACCGACTTT+TGG | 0.322363 | 7.2:-8327656 | MS.gene050326:CDS |
| ACCTGTTAGTCCGGTTTCTT+CGG | 0.327709 | 7.2:-8327210 | MS.gene050326:CDS |
| AAAACTCGGGTGGTCAATTT+GGG | 0.341515 | 7.2:-8327172 | MS.gene050326:CDS |
| ACACTGCGGCGTAATGCTGC+TGG | 0.344613 | 7.2:+8327516 | None:intergenic |
| TTACCTCATGCAGTGTTTAG+AGG | 0.347444 | 7.2:-8326476 | MS.gene050326:intron |
| TTGCTATTGGCGGCGGCGGC+GGG | 0.353891 | 7.2:-8327454 | MS.gene050326:CDS |
| CTCTCCACCACCCTTTCAAC+AGG | 0.360473 | 7.2:+8327104 | None:intergenic |
| CACTGCGGCGTAATGCTGCT+GGG | 0.364765 | 7.2:+8327517 | None:intergenic |
| TGGAGGAGTTGGAGAGCCTT+CGG | 0.365531 | 7.2:-8327384 | MS.gene050326:CDS |
| TCCGAAGAAACCGGACTAAC+AGG | 0.372237 | 7.2:+8327209 | None:intergenic |
| ATTATAGTTTAGACCATCAT+TGG | 0.373341 | 7.2:+8326569 | None:intergenic |
| TTTGCTATTGGCGGCGGCGG+CGG | 0.374673 | 7.2:-8327455 | MS.gene050326:CDS |
| CTTCGGGTTCGGGGTATGTT+GGG | 0.383128 | 7.2:-8327367 | MS.gene050326:CDS |
| CAAACCGCTGGCGGCGGCGG+AGG | 0.394088 | 7.2:+8327308 | None:intergenic |
| ACTGCTGCTGCGGCAGGTGG+TGG | 0.397437 | 7.2:+8327554 | None:intergenic |
| AATGGAGGGGCGGGCAGTTA+TGG | 0.405922 | 7.2:-8327266 | MS.gene050326:CDS |
| AGAGAATTCTCAACTGAAAC+AGG | 0.410221 | 7.2:-8326728 | MS.gene050326:CDS |
| CCGGTTTCTTCGGATGGGAT+TGG | 0.415620 | 7.2:-8327200 | MS.gene050326:CDS |
| GGAGGAGTTGGAGAGCCTTC+GGG | 0.416356 | 7.2:-8327383 | MS.gene050326:CDS |
| CCTTCGGGTTCGGGGTATGT+TGG | 0.416821 | 7.2:-8327368 | MS.gene050326:CDS |
| CACCTCCCTGTGCCACCGTT+TGG | 0.419295 | 7.2:+8327405 | None:intergenic |
| AAGATCTAGAGCCAGAAAAC+AGG | 0.420885 | 7.2:-8327042 | MS.gene050326:intron |
| CGGCGTAATGCTGCTGGGGC+CGG | 0.426351 | 7.2:+8327522 | None:intergenic |
| GCACAGGGAGGTGGAGGAGT+TGG | 0.427569 | 7.2:-8327395 | MS.gene050326:CDS |
| GTTAGTCCGGTTTCTTCGGA+TGG | 0.429323 | 7.2:-8327206 | MS.gene050326:CDS |
| TCATTTGCTATTGGCGGCGG+CGG | 0.434400 | 7.2:-8327458 | MS.gene050326:CDS |
| CCCTGTGCCACCGTTTGGTA+TGG | 0.438711 | 7.2:+8327410 | None:intergenic |
| GGTGGTGGTGCTATGGCAAC+CGG | 0.443970 | 7.2:+8327569 | None:intergenic |
| GAGGGAGAGTGGTGAATGGA+GGG | 0.444211 | 7.2:-8327280 | MS.gene050326:CDS |
| GATGGGCGGACCTGTTAGTC+CGG | 0.445248 | 7.2:-8327219 | MS.gene050326:CDS |
| ATTGATATGAATGGTTTAAG+AGG | 0.448244 | 7.2:-8327149 | MS.gene050326:CDS |
| GGAAGAAAGAGGATGGTTGA+TGG | 0.453215 | 7.2:-8327128 | MS.gene050326:CDS |
| GAGGATTTCTTGGTTAAAGC+AGG | 0.456229 | 7.2:-8327620 | MS.gene050326:CDS |
| GATGACACTGCTGCTGCGGC+AGG | 0.456822 | 7.2:+8327548 | None:intergenic |
| TGGTGGAGAGAAGGCAGAGG+AGG | 0.457363 | 7.2:-8327091 | MS.gene050326:CDS |
| GACTAGGGATAGTATAGGTA+CGG | 0.462211 | 7.2:-8327336 | MS.gene050326:CDS |
| GCCATACCAAACGGTGGCAC+AGG | 0.467096 | 7.2:-8327411 | MS.gene050326:CDS |
| ACGGTGGCACAGGGAGGTGG+AGG | 0.470179 | 7.2:-8327401 | MS.gene050326:CDS |
| TAACAAACCGCTGGCGGCGG+CGG | 0.477710 | 7.2:+8327305 | None:intergenic |
| CCGCCAGCGGTTTGTTATGG+AGG | 0.477954 | 7.2:-8327299 | MS.gene050326:CDS |
| CAAACGGTGGCACAGGGAGG+TGG | 0.478151 | 7.2:-8327404 | MS.gene050326:CDS |
| GGTTGATGGTCCTGTTGAAA+GGG | 0.481262 | 7.2:-8327114 | MS.gene050326:CDS |
| CCAATCCCATCCGAAGAAAC+CGG | 0.481309 | 7.2:+8327200 | None:intergenic |
| GGTTAAAGCAGGGGTAGTTA+GGG | 0.481908 | 7.2:-8327609 | MS.gene050326:CDS |
| AGAGAGGAGAAGAAGACAAC+AGG | 0.484243 | 7.2:-8326595 | MS.gene050326:CDS |
| TTAGTCCGGTTTCTTCGGAT+GGG | 0.486374 | 7.2:-8327205 | MS.gene050326:CDS |
| GACACTGCTGCTGCGGCAGG+TGG | 0.491945 | 7.2:+8327551 | None:intergenic |
| AGGGAGAGTGGTGAATGGAG+GGG | 0.491999 | 7.2:-8327279 | MS.gene050326:CDS |
| GCTGCTTCATTTGCTATTGG+CGG | 0.495000 | 7.2:-8327464 | MS.gene050326:CDS |
| GAGAGTGGTGAATGGAGGGG+CGG | 0.497049 | 7.2:-8327276 | MS.gene050326:CDS |
| AGAGTGGTGAATGGAGGGGC+GGG | 0.502580 | 7.2:-8327275 | MS.gene050326:CDS |
| AGTGGCACAAACTATGGGGA+TGG | 0.502987 | 7.2:-8327237 | MS.gene050326:CDS |
| CAATTTGGGATTGATATGAA+TGG | 0.505237 | 7.2:-8327158 | MS.gene050326:CDS |
| TGCGGCAGGTGGTGGTGCTA+TGG | 0.506524 | 7.2:+8327562 | None:intergenic |
| GGGTGGTGGAGAGAAGGCAG+AGG | 0.506953 | 7.2:-8327094 | MS.gene050326:CDS |
| GGGCAGTTATGGTGTGGCAG+TGG | 0.507642 | 7.2:-8327255 | MS.gene050326:CDS |
| GGAGGGAGAGTGGTGAATGG+AGG | 0.509570 | 7.2:-8327281 | MS.gene050326:CDS |
| CCATAACAAACCGCTGGCGG+CGG | 0.510979 | 7.2:+8327302 | None:intergenic |
| AGACAACAGGTAACCAATGA+TGG | 0.512321 | 7.2:-8326582 | MS.gene050326:intron |
| CAACATTGTTGATGTTGTGA+TGG | 0.520957 | 7.2:+8327696 | None:intergenic |
| GTGGCAGTGGCACAAACTAT+GGG | 0.520968 | 7.2:-8327242 | MS.gene050326:CDS |
| CGCCAAAAGTCGGTTGTCGA+GGG | 0.522444 | 7.2:+8327654 | None:intergenic |
| GCTTCATTTGCTATTGGCGG+CGG | 0.528163 | 7.2:-8327461 | MS.gene050326:CDS |
| TATGGAGGGAGAGTGGTGAA+TGG | 0.528806 | 7.2:-8327284 | MS.gene050326:CDS |
| CGCCAGCGGTTTGTTATGGA+GGG | 0.528969 | 7.2:-8327298 | MS.gene050326:CDS |
| ACTAGGGATAGTATAGGTAC+GGG | 0.531284 | 7.2:-8327335 | MS.gene050326:CDS |
| AGAAACTGAGAGGCTTAAGA+AGG | 0.532363 | 7.2:-8326411 | MS.gene050326:CDS |
| TAACAACTCTACAATGGCTC+AGG | 0.534100 | 7.2:-8327486 | MS.gene050326:CDS |
| TGTTGGGAATGGTAAGACTA+GGG | 0.535160 | 7.2:-8327351 | MS.gene050326:CDS |
| TTTAAGAGGAAGAAAGAGGA+TGG | 0.548041 | 7.2:-8327135 | MS.gene050326:CDS |
| TCGCCAAAAGTCGGTTGTCG+AGG | 0.549884 | 7.2:+8327653 | None:intergenic |
| TTGAAAGGGTGGTGGAGAGA+AGG | 0.555209 | 7.2:-8327100 | MS.gene050326:CDS |
| GTGGCACAAACTATGGGGAT+GGG | 0.557884 | 7.2:-8327236 | MS.gene050326:CDS |
| GGAACAACAGTCTGGTATGC+CGG | 0.558038 | 7.2:-8327588 | MS.gene050326:CDS |
| CTCCCTCCATAACAAACCGC+TGG | 0.558325 | 7.2:+8327296 | None:intergenic |
| GTAGTTAGGGAACAACAGTC+TGG | 0.560019 | 7.2:-8327596 | MS.gene050326:CDS |
| TTCTCAACTGAAACAGGCAC+TGG | 0.564684 | 7.2:-8326722 | MS.gene050326:intron |
| TGGTTGATGGTCCTGTTGAA+AGG | 0.565970 | 7.2:-8327115 | MS.gene050326:CDS |
| GGTTCGGGGTATGTTGGGAA+TGG | 0.567692 | 7.2:-8327362 | MS.gene050326:CDS |
| CAGCAGCAGTGTCATCTCAC+CGG | 0.569711 | 7.2:-8327541 | MS.gene050326:CDS |
| ATGGTTTAAGAGGAAGAAAG+AGG | 0.570839 | 7.2:-8327139 | MS.gene050326:CDS |
| TTGGAGAGCCTTCGGGTTCG+GGG | 0.572733 | 7.2:-8327376 | MS.gene050326:CDS |
| TGTGCCACCGTTTGGTATGG+CGG | 0.573089 | 7.2:+8327413 | None:intergenic |
| AGGATTTCTTGGTTAAAGCA+GGG | 0.574066 | 7.2:-8327619 | MS.gene050326:CDS |
| TGATGGTCCTGTTGAAAGGG+TGG | 0.574869 | 7.2:-8327111 | MS.gene050326:CDS |
| TTCTTCAGGCTGAACTAGAG+AGG | 0.575021 | 7.2:-8326611 | MS.gene050326:intron |
| GGTAAGACTAGGGATAGTAT+AGG | 0.577774 | 7.2:-8327341 | MS.gene050326:CDS |
| ACTGCGGCGTAATGCTGCTG+GGG | 0.580500 | 7.2:+8327518 | None:intergenic |
| CCATACCAAACGGTGGCACA+GGG | 0.583912 | 7.2:-8327410 | MS.gene050326:CDS |
| TGGGATTGGAAACGAAAACT+CGG | 0.584083 | 7.2:-8327186 | MS.gene050326:CDS |
| ATGTTGGGAATGGTAAGACT+AGG | 0.593588 | 7.2:-8327352 | MS.gene050326:CDS |
| GGTTGCGCCGCCATACCAAA+CGG | 0.595175 | 7.2:-8327420 | MS.gene050326:CDS |
| GTATCCTCCGCCGCCGCCAG+CGG | 0.598153 | 7.2:-8327312 | MS.gene050326:CDS |
| CGGCGGCGGGAATCTGAATG+TGG | 0.602274 | 7.2:-8327441 | MS.gene050326:CDS |
| AATGTCATCTCGCCAAAAGT+CGG | 0.605885 | 7.2:+8327644 | None:intergenic |
| GTGAGATGACACTGCTGCTG+CGG | 0.608010 | 7.2:+8327544 | None:intergenic |
| TGGTCCTGTTGAAAGGGTGG+TGG | 0.612440 | 7.2:-8327108 | MS.gene050326:CDS |
| CGGTTGTCGAGGGGTAGACT+CGG | 0.617759 | 7.2:+8327664 | None:intergenic |
| TCCTAATAACAACTCTACAA+TGG | 0.627967 | 7.2:-8327492 | MS.gene050326:CDS |
| GCACAAACTATGGGGATGGG+CGG | 0.628434 | 7.2:-8327233 | MS.gene050326:CDS |
| GGTTTGTTATGGAGGGAGAG+TGG | 0.634679 | 7.2:-8327291 | MS.gene050326:CDS |
| CCTCCATAACAAACCGCTGG+CGG | 0.640926 | 7.2:+8327299 | None:intergenic |
| GGATTTCTTGGTTAAAGCAG+GGG | 0.646725 | 7.2:-8327618 | MS.gene050326:CDS |
| AGGGGCGGGCAGTTATGGTG+TGG | 0.648133 | 7.2:-8327261 | MS.gene050326:CDS |
| CCAACATACCCCGAACCCGA+AGG | 0.649040 | 7.2:+8327368 | None:intergenic |
| GCCAAAAGTCGGTTGTCGAG+GGG | 0.657167 | 7.2:+8327655 | None:intergenic |
| GGGATTGGAAACGAAAACTC+GGG | 0.662976 | 7.2:-8327185 | MS.gene050326:CDS |
| TACCAAACGGTGGCACAGGG+AGG | 0.683725 | 7.2:-8327407 | MS.gene050326:CDS |
| TGCGCCGCCATACCAAACGG+TGG | 0.683832 | 7.2:-8327417 | MS.gene050326:CDS |
| TGGCAGTGGCACAAACTATG+GGG | 0.694881 | 7.2:-8327241 | MS.gene050326:CDS |
| ATTGGAAACGAAAACTCGGG+TGG | 0.712637 | 7.2:-8327182 | MS.gene050326:CDS |
| TATGTGAAGAAAACATCACA+TGG | 0.715611 | 7.2:-8326374 | MS.gene050326:CDS |
| AAAGCAAAAGAGAAACTGAG+AGG | 0.716117 | 7.2:-8326421 | MS.gene050326:CDS |
| CTAGGGATAGTATAGGTACG+GGG | 0.720083 | 7.2:-8327334 | MS.gene050326:CDS |
| GTTGTTATTAGGATACACTG+CGG | 0.806201 | 7.2:+8327502 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTAAAGTATAAAATAAT+TGG | + | chr7.2:8327090-8327109 | None:intergenic | 10.0% |
| !! | AAATAATTGGTTAAAATTTC+AGG | + | chr7.2:8327077-8327096 | None:intergenic | 15.0% |
| !! | TAGATTTGATTCAAAATAAA+AGG | + | chr7.2:8327579-8327598 | None:intergenic | 15.0% |
| !! | TATATATACATAAGAATTTG+TGG | + | chr7.2:8327125-8327144 | None:intergenic | 15.0% |
| !! | TTTATATACTATTGAAGAAT+TGG | - | chr7.2:8327167-8327186 | MS.gene050326:CDS | 15.0% |
| !!! | CAAACATATTATTTCTAATT+TGG | + | chr7.2:8327225-8327244 | None:intergenic | 15.0% |
| !!! | TAATGTCTTTAAATTTTCTG+TGG | + | chr7.2:8327551-8327570 | None:intergenic | 20.0% |
| ! | ATTATAGTTTAGACCATCAT+TGG | + | chr7.2:8327525-8327544 | None:intergenic | 25.0% |
| ! | ATTGATATGAATGGTTTAAG+AGG | - | chr7.2:8326942-8326961 | MS.gene050326:intron | 25.0% |
| ! | CTGTAATAGTTAATGTTGTT+TGG | + | chr7.2:8327400-8327419 | None:intergenic | 25.0% |
| ! | GAAAGAAAATTGTGTTACAA+AGG | + | chr7.2:8327287-8327306 | None:intergenic | 25.0% |
| TATGTGAAGAAAACATCACA+TGG | - | chr7.2:8327717-8327736 | MS.gene050326:CDS | 30.0% | |
| TCCTAATAACAACTCTACAA+TGG | - | chr7.2:8326599-8326618 | MS.gene050326:CDS | 30.0% | |
| ! | ATTTTCTTTCTTGCTTATGC+AGG | - | chr7.2:8327297-8327316 | MS.gene050326:CDS | 30.0% |
| ! | CAATTTGGGATTGATATGAA+TGG | - | chr7.2:8326933-8326952 | MS.gene050326:intron | 30.0% |
| ! | TCATGCTTCTTTTATTCTTC+AGG | - | chr7.2:8327466-8327485 | MS.gene050326:CDS | 30.0% |
| AAAGCAAAAGAGAAACTGAG+AGG | - | chr7.2:8327670-8327689 | MS.gene050326:CDS | 35.0% | |
| AGAGAATTCTCAACTGAAAC+AGG | - | chr7.2:8327363-8327382 | MS.gene050326:CDS | 35.0% | |
| AGGATTTCTTGGTTAAAGCA+GGG | - | chr7.2:8326472-8326491 | MS.gene050326:intron | 35.0% | |
| ATGGTTTAAGAGGAAGAAAG+AGG | - | chr7.2:8326952-8326971 | MS.gene050326:intron | 35.0% | |
| CAACATTGTTGATGTTGTGA+TGG | + | chr7.2:8326398-8326417 | None:intergenic | 35.0% | |
| GTGATTCAACTATACTGACA+AGG | - | chr7.2:8327442-8327461 | MS.gene050326:CDS | 35.0% | |
| TTTAAGAGGAAGAAAGAGGA+TGG | - | chr7.2:8326956-8326975 | MS.gene050326:intron | 35.0% | |
| ! | AATTTCAGGAACCTGTTTTC+TGG | + | chr7.2:8327063-8327082 | None:intergenic | 35.0% |
| ! | GCCATTGTAGAGTTGTTATT+AGG | + | chr7.2:8326603-8326622 | None:intergenic | 35.0% |
| ! | GTTGTTATTAGGATACACTG+CGG | + | chr7.2:8326592-8326611 | None:intergenic | 35.0% |
| AAAACTCGGGTGGTCAATTT+GGG | - | chr7.2:8326919-8326938 | MS.gene050326:intron | 40.0% | |
| AATGTCATCTCGCCAAAAGT+CGG | + | chr7.2:8326450-8326469 | None:intergenic | 40.0% | |
| ACTAGGGATAGTATAGGTAC+GGG | - | chr7.2:8326756-8326775 | MS.gene050326:CDS | 40.0% | |
| AGAAACTGAGAGGCTTAAGA+AGG | - | chr7.2:8327680-8327699 | MS.gene050326:CDS | 40.0% | |
| AGACAACAGGTAACCAATGA+TGG | - | chr7.2:8327509-8327528 | MS.gene050326:CDS | 40.0% | |
| ATGTTGGGAATGGTAAGACT+AGG | - | chr7.2:8326739-8326758 | MS.gene050326:CDS | 40.0% | |
| GACTAGGGATAGTATAGGTA+CGG | - | chr7.2:8326755-8326774 | MS.gene050326:CDS | 40.0% | |
| GAGGATTTCTTGGTTAAAGC+AGG | - | chr7.2:8326471-8326490 | MS.gene050326:intron | 40.0% | |
| GATGACATTGGAGGATTTCT+TGG | - | chr7.2:8326461-8326480 | MS.gene050326:CDS | 40.0% | |
| GGATTTCTTGGTTAAAGCAG+GGG | - | chr7.2:8326473-8326492 | MS.gene050326:intron | 40.0% | |
| GGTAAGACTAGGGATAGTAT+AGG | - | chr7.2:8326750-8326769 | MS.gene050326:CDS | 40.0% | |
| TAACAACTCTACAATGGCTC+AGG | - | chr7.2:8326605-8326624 | MS.gene050326:CDS | 40.0% | |
| TGGGATTGGAAACGAAAACT+CGG | - | chr7.2:8326905-8326924 | MS.gene050326:intron | 40.0% | |
| TGTTGGGAATGGTAAGACTA+GGG | - | chr7.2:8326740-8326759 | MS.gene050326:CDS | 40.0% | |
| TTACCTCATGCAGTGTTTAG+AGG | - | chr7.2:8327615-8327634 | MS.gene050326:CDS | 40.0% | |
| TTTCCTCTAAACACTGCATG+AGG | + | chr7.2:8327621-8327640 | None:intergenic | 40.0% | |
| ! | AAGATCTAGAGCCAGAAAAC+AGG | - | chr7.2:8327049-8327068 | MS.gene050326:CDS | 40.0% |
| ! | CTCTTTTGCTTTCTGAGCTT+TGG | + | chr7.2:8327662-8327681 | None:intergenic | 40.0% |
| ACCTGTTAGTCCGGTTTCTT+CGG | - | chr7.2:8326881-8326900 | MS.gene050326:intron | 45.0% | |
| AGAGAGGAGAAGAAGACAAC+AGG | - | chr7.2:8327496-8327515 | MS.gene050326:CDS | 45.0% | |
| ATTGGAAACGAAAACTCGGG+TGG | - | chr7.2:8326909-8326928 | MS.gene050326:intron | 45.0% | |
| CTAGGGATAGTATAGGTACG+GGG | - | chr7.2:8326757-8326776 | MS.gene050326:CDS | 45.0% | |
| GAAAACTCGGGTGGTCAATT+TGG | - | chr7.2:8326918-8326937 | MS.gene050326:intron | 45.0% | |
| GGAAGAAAGAGGATGGTTGA+TGG | - | chr7.2:8326963-8326982 | MS.gene050326:intron | 45.0% | |
| GGGATTGGAAACGAAAACTC+GGG | - | chr7.2:8326906-8326925 | MS.gene050326:intron | 45.0% | |
| GGTTAAAGCAGGGGTAGTTA+GGG | - | chr7.2:8326482-8326501 | MS.gene050326:intron | 45.0% | |
| GTAGTTAGGGAACAACAGTC+TGG | - | chr7.2:8326495-8326514 | MS.gene050326:intron | 45.0% | |
| TGGTTAAAGCAGGGGTAGTT+AGG | - | chr7.2:8326481-8326500 | MS.gene050326:intron | 45.0% | |
| TTAGTCCGGTTTCTTCGGAT+GGG | - | chr7.2:8326886-8326905 | MS.gene050326:intron | 45.0% | |
| TTCTCAACTGAAACAGGCAC+TGG | - | chr7.2:8327369-8327388 | MS.gene050326:CDS | 45.0% | |
| TTCTTCAGGCTGAACTAGAG+AGG | - | chr7.2:8327480-8327499 | MS.gene050326:CDS | 45.0% | |
| ! | GACTTTTGGCGAGATGACAT+TGG | - | chr7.2:8326449-8326468 | MS.gene050326:CDS | 45.0% |
| ! | TTTTGGCGAGATGACATTGG+AGG | - | chr7.2:8326452-8326471 | MS.gene050326:CDS | 45.0% |
| !! | CAGGCTGCTTCATTTGCTAT+TGG | - | chr7.2:8326624-8326643 | MS.gene050326:intron | 45.0% |
| !! | GCTGCTTCATTTGCTATTGG+CGG | - | chr7.2:8326627-8326646 | MS.gene050326:intron | 45.0% |
| !! | GGTTGATGGTCCTGTTGAAA+GGG | - | chr7.2:8326977-8326996 | MS.gene050326:intron | 45.0% |
| !! | TGGTTGATGGTCCTGTTGAA+AGG | - | chr7.2:8326976-8326995 | MS.gene050326:intron | 45.0% |
| AGTGGCACAAACTATGGGGA+TGG | - | chr7.2:8326854-8326873 | MS.gene050326:intron | 50.0% | |
| CCAATCCCATCCGAAGAAAC+CGG | + | chr7.2:8326894-8326913 | None:intergenic | 50.0% | |
| GGAACAACAGTCTGGTATGC+CGG | - | chr7.2:8326503-8326522 | MS.gene050326:intron | 50.0% | |
| GTGGCACAAACTATGGGGAT+GGG | - | chr7.2:8326855-8326874 | MS.gene050326:intron | 50.0% | |
| GTGGCAGTGGCACAAACTAT+GGG | - | chr7.2:8326849-8326868 | MS.gene050326:intron | 50.0% | |
| GTTAGTCCGGTTTCTTCGGA+TGG | - | chr7.2:8326885-8326904 | MS.gene050326:intron | 50.0% | |
| TATGGAGGGAGAGTGGTGAA+TGG | - | chr7.2:8326807-8326826 | MS.gene050326:intron | 50.0% | |
| TCCGAAGAAACCGGACTAAC+AGG | + | chr7.2:8326885-8326904 | None:intergenic | 50.0% | |
| TGATGGTCCTGTTGAAAGGG+TGG | - | chr7.2:8326980-8326999 | MS.gene050326:intron | 50.0% | |
| TGGCAGTGGCACAAACTATG+GGG | - | chr7.2:8326850-8326869 | MS.gene050326:intron | 50.0% | |
| TGTGGCAGTGGCACAAACTA+TGG | - | chr7.2:8326848-8326867 | MS.gene050326:intron | 50.0% | |
| !! | GCTTCATTTGCTATTGGCGG+CGG | - | chr7.2:8326630-8326649 | MS.gene050326:intron | 50.0% |
| !! | GGTTTGTTATGGAGGGAGAG+TGG | - | chr7.2:8326800-8326819 | MS.gene050326:intron | 50.0% |
| !! | TTGAAAGGGTGGTGGAGAGA+AGG | - | chr7.2:8326991-8327010 | MS.gene050326:intron | 50.0% |
| AGGGAGAGTGGTGAATGGAG+GGG | - | chr7.2:8326812-8326831 | MS.gene050326:intron | 55.0% | |
| CAGCAGCAGTGTCATCTCAC+CGG | - | chr7.2:8326550-8326569 | MS.gene050326:intron | 55.0% | |
| CCATACCAAACGGTGGCACA+GGG | - | chr7.2:8326681-8326700 | MS.gene050326:intron | 55.0% | |
| CCGGTTTCTTCGGATGGGAT+TGG | - | chr7.2:8326891-8326910 | MS.gene050326:intron | 55.0% | |
| CCTCCATAACAAACCGCTGG+CGG | + | chr7.2:8326795-8326814 | None:intergenic | 55.0% | |
| CGCCAAAAGTCGGTTGTCGA+GGG | + | chr7.2:8326440-8326459 | None:intergenic | 55.0% | |
| CTCCCTCCATAACAAACCGC+TGG | + | chr7.2:8326798-8326817 | None:intergenic | 55.0% | |
| CTCTCCACCACCCTTTCAAC+AGG | + | chr7.2:8326990-8327009 | None:intergenic | 55.0% | |
| GAGGGAGAGTGGTGAATGGA+GGG | - | chr7.2:8326811-8326830 | MS.gene050326:intron | 55.0% | |
| GCACAAACTATGGGGATGGG+CGG | - | chr7.2:8326858-8326877 | MS.gene050326:intron | 55.0% | |
| GCCAAAAGTCGGTTGTCGAG+GGG | + | chr7.2:8326439-8326458 | None:intergenic | 55.0% | |
| GGTTCGGGGTATGTTGGGAA+TGG | - | chr7.2:8326729-8326748 | MS.gene050326:CDS | 55.0% | |
| GTGAGATGACACTGCTGCTG+CGG | + | chr7.2:8326550-8326569 | None:intergenic | 55.0% | |
| TCGCCAAAAGTCGGTTGTCG+AGG | + | chr7.2:8326441-8326460 | None:intergenic | 55.0% | |
| TGGAGGAGTTGGAGAGCCTT+CGG | - | chr7.2:8326707-8326726 | MS.gene050326:intron | 55.0% | |
| TGGTCCTGTTGAAAGGGTGG+TGG | - | chr7.2:8326983-8327002 | MS.gene050326:intron | 55.0% | |
| TGTGCCACCGTTTGGTATGG+CGG | + | chr7.2:8326681-8326700 | None:intergenic | 55.0% | |
| ! | AGTTGGAGAGCCTTCGGGTT+CGG | - | chr7.2:8326713-8326732 | MS.gene050326:intron | 55.0% |
| ! | CTTCGGGTTCGGGGTATGTT+GGG | - | chr7.2:8326724-8326743 | MS.gene050326:CDS | 55.0% |
| !! | ACCCCTCGACAACCGACTTT+TGG | - | chr7.2:8326435-8326454 | MS.gene050326:CDS | 55.0% |
| !! | CGCCAGCGGTTTGTTATGGA+GGG | - | chr7.2:8326793-8326812 | MS.gene050326:intron | 55.0% |
| !! | TCATTTGCTATTGGCGGCGG+CGG | - | chr7.2:8326633-8326652 | MS.gene050326:intron | 55.0% |
| AATGGAGGGGCGGGCAGTTA+TGG | - | chr7.2:8326825-8326844 | MS.gene050326:intron | 60.0% | |
| ACACTGCGGCGTAATGCTGC+TGG | + | chr7.2:8326578-8326597 | None:intergenic | 60.0% | |
| ACTGCGGCGTAATGCTGCTG+GGG | + | chr7.2:8326576-8326595 | None:intergenic | 60.0% | |
| AGAGTGGTGAATGGAGGGGC+GGG | - | chr7.2:8326816-8326835 | MS.gene050326:intron | 60.0% | |
| CACTGCGGCGTAATGCTGCT+GGG | + | chr7.2:8326577-8326596 | None:intergenic | 60.0% | |
| CCAACATACCCCGAACCCGA+AGG | + | chr7.2:8326726-8326745 | None:intergenic | 60.0% | |
| CCATAACAAACCGCTGGCGG+CGG | + | chr7.2:8326792-8326811 | None:intergenic | 60.0% | |
| CCCTGTGCCACCGTTTGGTA+TGG | + | chr7.2:8326684-8326703 | None:intergenic | 60.0% | |
| CGGTTGTCGAGGGGTAGACT+CGG | + | chr7.2:8326430-8326449 | None:intergenic | 60.0% | |
| GAGAGTGGTGAATGGAGGGG+CGG | - | chr7.2:8326815-8326834 | MS.gene050326:intron | 60.0% | |
| GATGGGCGGACCTGTTAGTC+CGG | - | chr7.2:8326872-8326891 | MS.gene050326:intron | 60.0% | |
| GCCATACCAAACGGTGGCAC+AGG | - | chr7.2:8326680-8326699 | MS.gene050326:intron | 60.0% | |
| GGAGGAGTTGGAGAGCCTTC+GGG | - | chr7.2:8326708-8326727 | MS.gene050326:intron | 60.0% | |
| GGAGGGAGAGTGGTGAATGG+AGG | - | chr7.2:8326810-8326829 | MS.gene050326:intron | 60.0% | |
| GGGCAGTTATGGTGTGGCAG+TGG | - | chr7.2:8326836-8326855 | MS.gene050326:intron | 60.0% | |
| GGTTGCGCCGCCATACCAAA+CGG | - | chr7.2:8326671-8326690 | MS.gene050326:intron | 60.0% | |
| TACCAAACGGTGGCACAGGG+AGG | - | chr7.2:8326684-8326703 | MS.gene050326:intron | 60.0% | |
| TGGTGGAGAGAAGGCAGAGG+AGG | - | chr7.2:8327000-8327019 | MS.gene050326:intron | 60.0% | |
| ! | CCTTCGGGTTCGGGGTATGT+TGG | - | chr7.2:8326723-8326742 | MS.gene050326:CDS | 60.0% |
| ! | GTTGGAGAGCCTTCGGGTTC+GGG | - | chr7.2:8326714-8326733 | MS.gene050326:intron | 60.0% |
| ! | TTGGAGAGCCTTCGGGTTCG+GGG | - | chr7.2:8326715-8326734 | MS.gene050326:intron | 60.0% |
| !! | CCGCCAGCGGTTTGTTATGG+AGG | - | chr7.2:8326792-8326811 | MS.gene050326:intron | 60.0% |
| !! | GGTGGTGGTGCTATGGCAAC+CGG | + | chr7.2:8326525-8326544 | None:intergenic | 60.0% |
| AGGGGCGGGCAGTTATGGTG+TGG | - | chr7.2:8326830-8326849 | MS.gene050326:intron | 65.0% | |
| CAAACGGTGGCACAGGGAGG+TGG | - | chr7.2:8326687-8326706 | MS.gene050326:intron | 65.0% | |
| CACCTCCCTGTGCCACCGTT+TGG | + | chr7.2:8326689-8326708 | None:intergenic | 65.0% | |
| CGGCGGCGGGAATCTGAATG+TGG | - | chr7.2:8326650-8326669 | MS.gene050326:intron | 65.0% | |
| GATGACACTGCTGCTGCGGC+AGG | + | chr7.2:8326546-8326565 | None:intergenic | 65.0% | |
| GCACAGGGAGGTGGAGGAGT+TGG | - | chr7.2:8326696-8326715 | MS.gene050326:intron | 65.0% | |
| TAACAAACCGCTGGCGGCGG+CGG | + | chr7.2:8326789-8326808 | None:intergenic | 65.0% | |
| TGCGCCGCCATACCAAACGG+TGG | - | chr7.2:8326674-8326693 | MS.gene050326:intron | 65.0% | |
| ! | TGCGGCAGGTGGTGGTGCTA+TGG | + | chr7.2:8326532-8326551 | None:intergenic | 65.0% |
| !! | CCGCCGCCAGCGGTTTGTTA+TGG | - | chr7.2:8326789-8326808 | MS.gene050326:intron | 65.0% |
| !! | GGGTGGTGGAGAGAAGGCAG+AGG | - | chr7.2:8326997-8327016 | MS.gene050326:intron | 65.0% |
| !! | TTTGCTATTGGCGGCGGCGG+CGG | - | chr7.2:8326636-8326655 | MS.gene050326:intron | 65.0% |
| ACGGTGGCACAGGGAGGTGG+AGG | - | chr7.2:8326690-8326709 | MS.gene050326:intron | 70.0% | |
| ACTGCTGCTGCGGCAGGTGG+TGG | + | chr7.2:8326540-8326559 | None:intergenic | 70.0% | |
| CGGCGTAATGCTGCTGGGGC+CGG | + | chr7.2:8326572-8326591 | None:intergenic | 70.0% | |
| GACACTGCTGCTGCGGCAGG+TGG | + | chr7.2:8326543-8326562 | None:intergenic | 70.0% | |
| ! | TTGCTATTGGCGGCGGCGGC+GGG | - | chr7.2:8326637-8326656 | MS.gene050326:intron | 70.0% |
| GTATCCTCCGCCGCCGCCAG+CGG | - | chr7.2:8326779-8326798 | MS.gene050326:intron | 75.0% | |
| ! | CAAACCGCTGGCGGCGGCGG+AGG | + | chr7.2:8326786-8326805 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 8326364 | 8327749 | 8326364 | ID=MS.gene050326 |
| chr7.2 | mRNA | 8326364 | 8327749 | 8326364 | ID=MS.gene050326.t1;Parent=MS.gene050326 |
| chr7.2 | exon | 8327043 | 8327749 | 8327043 | ID=MS.gene050326.t1.exon1;Parent=MS.gene050326.t1 |
| chr7.2 | CDS | 8327043 | 8327749 | 8327043 | ID=cds.MS.gene050326.t1;Parent=MS.gene050326.t1 |
| chr7.2 | exon | 8326723 | 8326794 | 8326723 | ID=MS.gene050326.t1.exon2;Parent=MS.gene050326.t1 |
| chr7.2 | CDS | 8326723 | 8326794 | 8326723 | ID=cds.MS.gene050326.t1;Parent=MS.gene050326.t1 |
| chr7.2 | exon | 8326583 | 8326625 | 8326583 | ID=MS.gene050326.t1.exon3;Parent=MS.gene050326.t1 |
| chr7.2 | CDS | 8326583 | 8326625 | 8326583 | ID=cds.MS.gene050326.t1;Parent=MS.gene050326.t1 |
| chr7.2 | exon | 8326364 | 8326485 | 8326364 | ID=MS.gene050326.t1.exon4;Parent=MS.gene050326.t1 |
| chr7.2 | CDS | 8326364 | 8326485 | 8326364 | ID=cds.MS.gene050326.t1;Parent=MS.gene050326.t1 |
| Gene Sequence |
| Protein sequence |
