Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76883.t1 | XP_013459365.1 | 95.6 | 456 | 18 | 1 | 1 | 454 | 1 | 456 | 2.60E-262 | 914.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76883.t1 | Q9FLK4 | 68.1 | 451 | 137 | 5 | 6 | 452 | 11 | 458 | 1.1e-184 | 647.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76883.t1 | A0A072UVJ0 | 95.6 | 456 | 18 | 1 | 1 | 454 | 1 | 456 | 1.9e-262 | 914.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04921 | MS.gene76883 | 0.808269 | 3.36E-50 | -1.69E-46 |
| MS.gene049251 | MS.gene76883 | 0.813741 | 2.20E-51 | -1.69E-46 |
| MS.gene049596 | MS.gene76883 | 0.816883 | 4.39E-52 | -1.69E-46 |
| MS.gene049989 | MS.gene76883 | 0.84442 | 7.64E-59 | -1.69E-46 |
| MS.gene050297 | MS.gene76883 | 0.845497 | 3.91E-59 | -1.69E-46 |
| MS.gene050326 | MS.gene76883 | 0.811475 | 6.87E-51 | -1.69E-46 |
| MS.gene050328 | MS.gene76883 | 0.807175 | 5.75E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene76883 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene05124 | MS.gene76883 | 0.814174 | 1.76E-51 | -1.69E-46 |
| MS.gene052143 | MS.gene76883 | 0.864625 | 1.06E-64 | -1.69E-46 |
| MS.gene052225 | MS.gene76883 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene76883 | 0.814503 | 1.49E-51 | -1.69E-46 |
| MS.gene052367 | MS.gene76883 | 0.875319 | 3.38E-68 | -1.69E-46 |
| MS.gene052383 | MS.gene76883 | 0.82096 | 5.20E-53 | -1.69E-46 |
| MS.gene052494 | MS.gene76883 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene053173 | MS.gene76883 | 0.847376 | 1.20E-59 | -1.69E-46 |
| MS.gene053416 | MS.gene76883 | 0.855945 | 4.49E-62 | -1.69E-46 |
| MS.gene053417 | MS.gene76883 | 0.855197 | 7.42E-62 | -1.69E-46 |
| MS.gene053568 | MS.gene76883 | 0.803055 | 4.18E-49 | -1.69E-46 |
| MS.gene053569 | MS.gene76883 | 0.814046 | 1.88E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene76883 | 0.834461 | 2.96E-56 | -1.69E-46 |
| MS.gene054593 | MS.gene76883 | 0.806841 | 6.76E-50 | -1.69E-46 |
| MS.gene054614 | MS.gene76883 | 0.801802 | 7.58E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene76883 | 0.803371 | 3.60E-49 | -1.69E-46 |
| MS.gene054643 | MS.gene76883 | 0.833996 | 3.87E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene76883 | -0.810656 | 1.03E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene76883 | 0.886728 | 2.66E-72 | -1.69E-46 |
| MS.gene05589 | MS.gene76883 | -0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene76883 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene056266 | MS.gene76883 | -0.884582 | 1.70E-71 | -1.69E-46 |
| MS.gene056526 | MS.gene76883 | 0.848081 | 7.69E-60 | -1.69E-46 |
| MS.gene056694 | MS.gene76883 | 0.828412 | 9.12E-55 | -1.69E-46 |
| MS.gene056697 | MS.gene76883 | 0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene76883 | 0.811549 | 6.62E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene76883 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene057607 | MS.gene76883 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene058015 | MS.gene76883 | 0.823749 | 1.17E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene76883 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene058382 | MS.gene76883 | 0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene05926 | MS.gene76883 | 0.811169 | 8.01E-51 | -1.69E-46 |
| MS.gene059553 | MS.gene76883 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene060076 | MS.gene76883 | 0.827515 | 1.50E-54 | -1.69E-46 |
| MS.gene06033 | MS.gene76883 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene060473 | MS.gene76883 | 0.827435 | 1.57E-54 | -1.69E-46 |
| MS.gene060494 | MS.gene76883 | 0.803998 | 2.67E-49 | -1.69E-46 |
| MS.gene060565 | MS.gene76883 | 0.825921 | 3.60E-54 | -1.69E-46 |
| MS.gene06057 | MS.gene76883 | 0.836629 | 8.37E-57 | -1.69E-46 |
| MS.gene06093 | MS.gene76883 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene061044 | MS.gene76883 | 0.883421 | 4.55E-71 | -1.69E-46 |
| MS.gene061099 | MS.gene76883 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene061260 | MS.gene76883 | 0.839659 | 1.39E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76883 | MS.gene025792 | PPI |
| MS.gene76883 | MS.gene21150 | PPI |
| MS.gene015453 | MS.gene76883 | PPI |
| MS.gene76883 | MS.gene09953 | PPI |
| MS.gene99127 | MS.gene76883 | PPI |
| MS.gene63578 | MS.gene76883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76883.t1 | MTR_3g437580 | 95.614 | 456 | 18 | 1 | 1 | 454 | 1 | 456 | 0.0 | 910 |
| MS.gene76883.t1 | MTR_3g437580 | 94.461 | 343 | 17 | 1 | 1 | 341 | 1 | 343 | 0.0 | 679 |
| MS.gene76883.t1 | MTR_5g012130 | 48.322 | 447 | 202 | 10 | 9 | 441 | 11 | 442 | 4.07e-139 | 407 |
| MS.gene76883.t1 | MTR_8g037880 | 43.371 | 445 | 225 | 10 | 11 | 444 | 4 | 432 | 1.86e-117 | 351 |
| MS.gene76883.t1 | MTR_8g037910 | 42.227 | 431 | 228 | 8 | 11 | 435 | 4 | 419 | 2.47e-115 | 345 |
| MS.gene76883.t1 | MTR_5g012130 | 50.898 | 334 | 144 | 8 | 9 | 337 | 31 | 349 | 1.53e-105 | 317 |
| MS.gene76883.t1 | MTR_8g037910 | 43.161 | 329 | 171 | 6 | 11 | 338 | 4 | 317 | 1.01e-90 | 278 |
| MS.gene76883.t1 | MTR_5g012130 | 48.855 | 262 | 114 | 8 | 9 | 265 | 31 | 277 | 9.53e-71 | 226 |
| MS.gene76883.t1 | MTR_8g037910 | 41.197 | 284 | 151 | 6 | 11 | 293 | 4 | 272 | 1.54e-69 | 222 |
| MS.gene76883.t1 | MTR_3g109520 | 25.688 | 218 | 125 | 6 | 13 | 228 | 41 | 223 | 6.65e-16 | 79.7 |
| MS.gene76883.t1 | MTR_7g107710 | 25.214 | 234 | 137 | 5 | 11 | 241 | 6 | 204 | 1.73e-15 | 78.2 |
| MS.gene76883.t1 | MTR_7g107690 | 25.506 | 247 | 137 | 6 | 7 | 242 | 4 | 214 | 1.08e-14 | 75.9 |
| MS.gene76883.t1 | MTR_2g450510 | 25.287 | 261 | 146 | 7 | 9 | 245 | 3 | 238 | 5.41e-14 | 74.3 |
| MS.gene76883.t1 | MTR_6g086870 | 24.658 | 219 | 129 | 8 | 13 | 228 | 22 | 207 | 7.89e-13 | 70.5 |
| MS.gene76883.t1 | MTR_2g043850 | 27.317 | 205 | 106 | 7 | 11 | 198 | 14 | 192 | 8.56e-13 | 70.5 |
| MS.gene76883.t1 | MTR_1g008380 | 24.796 | 367 | 169 | 14 | 13 | 310 | 44 | 372 | 1.34e-12 | 69.7 |
| MS.gene76883.t1 | MTR_3g088925 | 21.387 | 346 | 179 | 6 | 11 | 296 | 7 | 319 | 1.64e-12 | 69.3 |
| MS.gene76883.t1 | MTR_2g450310 | 26.087 | 253 | 136 | 10 | 9 | 236 | 3 | 229 | 2.22e-12 | 69.3 |
| MS.gene76883.t1 | MTR_1g011630 | 21.834 | 229 | 142 | 6 | 13 | 241 | 18 | 209 | 4.49e-12 | 67.8 |
| MS.gene76883.t1 | MTR_1g046230 | 21.023 | 352 | 179 | 10 | 13 | 298 | 26 | 344 | 6.30e-12 | 67.8 |
| MS.gene76883.t1 | MTR_3g088945 | 21.098 | 346 | 180 | 6 | 11 | 296 | 7 | 319 | 9.38e-12 | 67.0 |
| MS.gene76883.t1 | MTR_2g020630 | 27.500 | 240 | 125 | 9 | 11 | 227 | 14 | 227 | 2.82e-11 | 65.9 |
| MS.gene76883.t1 | MTR_1088s0010 | 29.771 | 131 | 64 | 3 | 9 | 136 | 3 | 108 | 2.82e-11 | 62.0 |
| MS.gene76883.t1 | MTR_2g044140 | 27.805 | 205 | 105 | 7 | 11 | 198 | 14 | 192 | 6.26e-11 | 64.7 |
| MS.gene76883.t1 | MTR_7g099330 | 23.611 | 216 | 126 | 5 | 13 | 228 | 26 | 202 | 7.67e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76883.t1 | AT5G61290 | 68.293 | 451 | 136 | 5 | 6 | 452 | 11 | 458 | 0.0 | 648 |
| MS.gene76883.t1 | AT5G07800 | 67.105 | 456 | 131 | 6 | 6 | 450 | 11 | 458 | 0.0 | 641 |
| MS.gene76883.t1 | AT1G62620 | 46.205 | 448 | 220 | 9 | 6 | 443 | 8 | 444 | 4.03e-135 | 397 |
| MS.gene76883.t1 | AT1G63370 | 46.413 | 446 | 222 | 9 | 6 | 443 | 8 | 444 | 1.45e-134 | 395 |
| MS.gene76883.t1 | AT1G62560 | 45.133 | 452 | 225 | 9 | 1 | 441 | 1 | 440 | 7.89e-130 | 384 |
| MS.gene76883.t1 | AT1G65860 | 45.393 | 445 | 221 | 8 | 8 | 443 | 10 | 441 | 2.39e-128 | 380 |
| MS.gene76883.t1 | AT1G12200 | 47.098 | 448 | 218 | 10 | 4 | 441 | 7 | 445 | 1.50e-125 | 373 |
| MS.gene76883.t1 | AT1G62620 | 47.583 | 393 | 187 | 8 | 6 | 390 | 8 | 389 | 1.31e-121 | 360 |
| MS.gene76883.t1 | AT1G12140 | 45.638 | 447 | 219 | 9 | 7 | 443 | 9 | 441 | 1.48e-121 | 362 |
| MS.gene76883.t1 | AT1G12140 | 45.638 | 447 | 219 | 9 | 7 | 443 | 9 | 441 | 1.48e-121 | 362 |
| MS.gene76883.t1 | AT1G62560 | 46.324 | 408 | 198 | 8 | 1 | 399 | 1 | 396 | 2.23e-121 | 360 |
| MS.gene76883.t1 | AT1G12160 | 42.549 | 463 | 229 | 7 | 5 | 443 | 6 | 455 | 4.16e-121 | 361 |
| MS.gene76883.t1 | AT1G62600 | 45.011 | 451 | 221 | 10 | 7 | 443 | 9 | 446 | 1.97e-120 | 359 |
| MS.gene76883.t1 | AT1G12140 | 45.414 | 447 | 218 | 10 | 7 | 443 | 9 | 439 | 1.33e-118 | 355 |
| MS.gene76883.t1 | AT1G62540 | 45.393 | 445 | 221 | 8 | 8 | 443 | 10 | 441 | 6.59e-118 | 353 |
| MS.gene76883.t1 | AT1G62570 | 44.396 | 455 | 229 | 9 | 7 | 452 | 9 | 448 | 1.12e-116 | 350 |
| MS.gene76883.t1 | AT1G62540 | 43.617 | 470 | 218 | 10 | 8 | 443 | 10 | 466 | 4.40e-114 | 344 |
| MS.gene76883.t1 | AT1G62580 | 46.358 | 453 | 219 | 11 | 2 | 443 | 5 | 444 | 8.77e-114 | 342 |
| MS.gene76883.t1 | AT1G12130 | 42.765 | 463 | 223 | 9 | 8 | 443 | 10 | 457 | 2.65e-112 | 339 |
| MS.gene76883.t1 | AT1G62600 | 46.835 | 395 | 185 | 9 | 7 | 389 | 9 | 390 | 5.17e-109 | 328 |
| MS.gene76883.t1 | AT1G63340 | 44.619 | 446 | 197 | 12 | 2 | 443 | 5 | 404 | 2.70e-108 | 327 |
| MS.gene76883.t1 | AT1G62540 | 43.371 | 445 | 212 | 9 | 8 | 443 | 10 | 423 | 8.79e-106 | 321 |
| MS.gene76883.t1 | AT1G62580 | 43.416 | 486 | 218 | 14 | 2 | 443 | 5 | 477 | 3.13e-105 | 322 |
| MS.gene76883.t1 | AT1G63370 | 46.450 | 338 | 165 | 7 | 6 | 338 | 8 | 334 | 4.45e-102 | 308 |
| MS.gene76883.t1 | AT1G12200 | 50.296 | 338 | 149 | 9 | 8 | 338 | 11 | 336 | 1.69e-97 | 298 |
| MS.gene76883.t1 | AT1G62580 | 50.000 | 350 | 147 | 10 | 2 | 335 | 5 | 342 | 1.75e-88 | 274 |
| MS.gene76883.t1 | AT1G63390 | 49.375 | 160 | 70 | 5 | 7 | 161 | 9 | 162 | 1.30e-32 | 122 |
| MS.gene76883.t1 | AT5G45180 | 25.361 | 485 | 244 | 19 | 6 | 405 | 8 | 459 | 6.93e-22 | 98.2 |
| MS.gene76883.t1 | AT1G19250 | 28.926 | 242 | 125 | 8 | 8 | 227 | 10 | 226 | 5.45e-16 | 80.5 |
| MS.gene76883.t1 | AT4G13260 | 24.537 | 216 | 130 | 5 | 13 | 228 | 30 | 212 | 1.59e-12 | 68.6 |
| MS.gene76883.t1 | AT4G13260 | 24.537 | 216 | 130 | 5 | 13 | 228 | 30 | 212 | 3.40e-12 | 68.6 |
| MS.gene76883.t1 | AT2G33230 | 23.502 | 217 | 134 | 6 | 13 | 228 | 34 | 219 | 1.64e-11 | 66.2 |
| MS.gene76883.t1 | AT5G25620 | 23.846 | 260 | 152 | 8 | 13 | 261 | 34 | 258 | 4.13e-11 | 65.1 |
| MS.gene76883.t1 | AT5G25620 | 23.846 | 260 | 152 | 8 | 13 | 261 | 34 | 258 | 4.71e-11 | 65.1 |
| MS.gene76883.t1 | AT4G32540 | 25.000 | 248 | 137 | 8 | 3 | 241 | 7 | 214 | 5.20e-11 | 64.7 |
| MS.gene76883.t1 | AT4G32540 | 25.000 | 248 | 137 | 8 | 3 | 241 | 7 | 214 | 5.28e-11 | 64.7 |
Find 117 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTAATGGATGGCAATTT+TGG | 0.152109 | 3.3:+27501085 | None:intergenic |
| GAAAATCATGTCACCTTTAA+TGG | 0.155585 | 3.3:+27501072 | None:intergenic |
| TGGATAGCTCAATTGCTTTC+TGG | 0.169069 | 3.3:-27497790 | MS.gene76883:CDS |
| CCTCATGTCTCTACCTTTCT+TGG | 0.191684 | 3.3:+27501342 | None:intergenic |
| CCAAAATTGCCATCCATTAA+AGG | 0.193960 | 3.3:-27501085 | MS.gene76883:intron |
| CTACCTTTCTTGGTAGAAAA+TGG | 0.198982 | 3.3:+27501352 | None:intergenic |
| GTTAACAATGGAGTTAATTA+TGG | 0.259199 | 3.3:+27496439 | None:intergenic |
| GAAAAGAGTTTCTACCTAAA+GGG | 0.316983 | 3.3:+27501449 | None:intergenic |
| GGCATTCCTACTCATGATAT+TGG | 0.332854 | 3.3:-27497694 | MS.gene76883:CDS |
| ACCTCATTGTGGAATGGTTC+TGG | 0.335360 | 3.3:+27500676 | None:intergenic |
| GGATAGCTCAATTGCTTTCT+GGG | 0.344271 | 3.3:-27497789 | MS.gene76883:CDS |
| TTCTATAACCACCATTCCTT+TGG | 0.367024 | 3.3:+27498419 | None:intergenic |
| CTAGTTCTATTGCTATATCT+TGG | 0.369423 | 3.3:+27500294 | None:intergenic |
| TTATCTCTCTTGCTGCTACT+AGG | 0.370276 | 3.3:+27501563 | None:intergenic |
| TGCCTGCTACTTCTCTTTCA+TGG | 0.373660 | 3.3:+27497713 | None:intergenic |
| AAATGCATAGTCACATTTAC+AGG | 0.376176 | 3.3:-27500702 | MS.gene76883:CDS |
| AGAAAAGAGTTTCTACCTAA+AGG | 0.378578 | 3.3:+27501448 | None:intergenic |
| CTTGATGATTATCGTGTTTG+TGG | 0.386916 | 3.3:-27501211 | MS.gene76883:CDS |
| AATTAACTCCATTGTTAACT+TGG | 0.387019 | 3.3:-27496435 | MS.gene76883:CDS |
| TTGTGATAAGGTTGTGGAAG+AGG | 0.392803 | 3.3:-27501149 | MS.gene76883:CDS |
| ATTCCTTTGGTGTCAAGAAA+AGG | 0.410339 | 3.3:+27498432 | None:intergenic |
| AGATGATAAGGTTCAATACT+AGG | 0.413544 | 3.3:-27501252 | MS.gene76883:CDS |
| GACTCTATTGTGTATTGTAC+AGG | 0.418054 | 3.3:-27499028 | MS.gene76883:CDS |
| TTACCCTTCCATCCTCTTCA+AGG | 0.418369 | 3.3:+27499080 | None:intergenic |
| TTGCAGTATTGTGACAAATA+TGG | 0.418374 | 3.3:-27496518 | MS.gene76883:intron |
| AATACTAGGGTTAATTATGT+TGG | 0.420112 | 3.3:-27501238 | MS.gene76883:CDS |
| TTGGGTTAAGAGAGATGATA+AGG | 0.423127 | 3.3:-27501264 | MS.gene76883:CDS |
| TTCTCCATTCTTGTAATGGT+GGG | 0.427729 | 3.3:+27496480 | None:intergenic |
| ATTGAGCTATCCACATTGCT+TGG | 0.438044 | 3.3:+27497800 | None:intergenic |
| AAGGACTTTGAAGGGCCTCT+TGG | 0.444012 | 3.3:+27496375 | None:intergenic |
| TGCTATATCTTGGCCACTAT+AGG | 0.444873 | 3.3:+27500304 | None:intergenic |
| ATAGAAGGTGAAGACCCTTT+AGG | 0.453442 | 3.3:-27501463 | MS.gene76883:CDS |
| TAAGAGATGGAGAAAGTAAA+GGG | 0.454093 | 3.3:+27498358 | None:intergenic |
| AGTCCTTACTTCACTCAACT+TGG | 0.454993 | 3.3:-27496359 | MS.gene76883:CDS |
| GTGAACCCCATGACTTCTCT+TGG | 0.457699 | 3.3:+27501382 | None:intergenic |
| GATGCAGTGGTTGTTGCCAC+TGG | 0.458878 | 3.3:-27501121 | MS.gene76883:CDS |
| GTAAGAGATGGAGAAAGTAA+AGG | 0.463625 | 3.3:+27498357 | None:intergenic |
| TTTCTCCATTCTTGTAATGG+TGG | 0.463654 | 3.3:+27496479 | None:intergenic |
| TTCCTTTGGTGTCAAGAAAA+GGG | 0.465946 | 3.3:+27498433 | None:intergenic |
| TTGAGCTATCCACATTGCTT+GGG | 0.470765 | 3.3:+27497801 | None:intergenic |
| ATAAGTATTTCAACATGGCC+AGG | 0.471295 | 3.3:+27501313 | None:intergenic |
| TGGAAAGTGTGCTCATACAA+AGG | 0.471300 | 3.3:+27498381 | None:intergenic |
| CTTGCTGCTACTAGGCCTGC+TGG | 0.473674 | 3.3:+27501571 | None:intergenic |
| TCGAAGAATGTGTGTGTAAT+CGG | 0.476098 | 3.3:-27501601 | MS.gene76883:CDS |
| CAAAGAGAAGGATTGTGATA+AGG | 0.477585 | 3.3:-27501161 | MS.gene76883:CDS |
| TTCATCATTTCCTCCCATGA+TGG | 0.480463 | 3.3:+27497754 | None:intergenic |
| TATATAACAGGTTGTGGTGG+TGG | 0.481545 | 3.3:-27500336 | MS.gene76883:intron |
| GAAGGATTGTGATAAGGTTG+TGG | 0.494699 | 3.3:-27501155 | MS.gene76883:CDS |
| GTAATCGGTGCTGGACCAGC+AGG | 0.501353 | 3.3:-27501586 | MS.gene76883:CDS |
| GAGTGAAGTAAGGACTTTGA+AGG | 0.503755 | 3.3:+27496366 | None:intergenic |
| GCAAGAGAGATAAGAAAAGA+AGG | 0.509739 | 3.3:-27501553 | MS.gene76883:CDS |
| GACTCCCACCATTACAAGAA+TGG | 0.510699 | 3.3:-27496484 | MS.gene76883:CDS |
| TTACACACACATTCTTCGAT+TGG | 0.520487 | 3.3:+27501605 | None:intergenic |
| ATTGCTTGGGACTCAAAGAA+AGG | 0.521937 | 3.3:+27497814 | None:intergenic |
| AGTCCAAGTTGAGTGAAGTA+AGG | 0.523677 | 3.3:+27496356 | None:intergenic |
| ACAATCTCCAAGAGAAGTCA+TGG | 0.524334 | 3.3:-27501389 | MS.gene76883:CDS |
| AATGTGTGTGTAATCGGTGC+TGG | 0.528554 | 3.3:-27501595 | MS.gene76883:CDS |
| AGAGACATGAGGAGGTTCCC+TGG | 0.530130 | 3.3:-27501331 | MS.gene76883:CDS |
| GTCAAGAAAAGGGAAGCTAT+AGG | 0.535288 | 3.3:+27498443 | None:intergenic |
| TTGCTTGGGACTCAAAGAAA+GGG | 0.544898 | 3.3:+27497815 | None:intergenic |
| TACCTGTGGATGAAGGTGTA+AGG | 0.545448 | 3.3:+27500184 | None:intergenic |
| GGTTGTTAGAAGCAAAGAGA+AGG | 0.547672 | 3.3:-27501173 | MS.gene76883:CDS |
| GATGATAAGGTTCAATACTA+GGG | 0.548336 | 3.3:-27501251 | MS.gene76883:CDS |
| CGCCCTTGAAGAGGATGGAA+GGG | 0.549203 | 3.3:-27499083 | MS.gene76883:CDS |
| GTGGTTGGAAATTCCTATAG+TGG | 0.553536 | 3.3:-27500317 | MS.gene76883:CDS |
| ATCATGTCACCTTTAATGGA+TGG | 0.556571 | 3.3:+27501076 | None:intergenic |
| TTGTGGAAATAATTTGAAGT+GGG | 0.558306 | 3.3:-27501194 | MS.gene76883:CDS |
| TTATCAATACCTGTGGATGA+AGG | 0.559071 | 3.3:+27500177 | None:intergenic |
| AGATATAGCAATAGAACTAG+TGG | 0.561789 | 3.3:-27500291 | MS.gene76883:CDS |
| TACCCTTCCATCCTCTTCAA+GGG | 0.564528 | 3.3:+27499081 | None:intergenic |
| ATCTCTTGATACTATAACTG+AGG | 0.565528 | 3.3:-27500237 | MS.gene76883:CDS |
| TGGAGACATATCGAGACTCA+TGG | 0.565705 | 3.3:-27496415 | MS.gene76883:CDS |
| ATTCTTCGATTGGTTCGTCT+CGG | 0.568258 | 3.3:+27501615 | None:intergenic |
| TAACAGGTTGTGGTGGTGGT+TGG | 0.569616 | 3.3:-27500332 | MS.gene76883:intron |
| ATTTATATAACAGGTTGTGG+TGG | 0.571818 | 3.3:-27500339 | MS.gene76883:intron |
| ATGCCTATAAAAGTAAGAGA+TGG | 0.574083 | 3.3:+27498345 | None:intergenic |
| GTTATAGAAGATGACAGAGT+GGG | 0.574813 | 3.3:-27498405 | MS.gene76883:CDS |
| GCAGATAGACGCCCTTGAAG+AGG | 0.576782 | 3.3:-27499092 | MS.gene76883:intron |
| ATAGACGCCCTTGAAGAGGA+TGG | 0.578976 | 3.3:-27499088 | MS.gene76883:CDS |
| TACCATGAAAGAGAAGTAGC+AGG | 0.579370 | 3.3:-27497715 | MS.gene76883:CDS |
| ACGCCCTTGAAGAGGATGGA+AGG | 0.580659 | 3.3:-27499084 | MS.gene76883:CDS |
| AATGCTCAGGAATGGATACA+TGG | 0.580865 | 3.3:-27500735 | MS.gene76883:intron |
| GATATAGCAATAGAACTAGT+GGG | 0.582747 | 3.3:-27500290 | MS.gene76883:CDS |
| AAATATACCTCATTGTGGAA+TGG | 0.585498 | 3.3:+27500670 | None:intergenic |
| GACCTTACACCTTCATCCAC+AGG | 0.589301 | 3.3:-27500186 | MS.gene76883:intron |
| TCTTGACACCAAAGGAATGG+TGG | 0.594626 | 3.3:-27498427 | MS.gene76883:CDS |
| CAATCTCCAAGAGAAGTCAT+GGG | 0.596018 | 3.3:-27501388 | MS.gene76883:CDS |
| GAACAGAATCATGACATTGG+AGG | 0.596567 | 3.3:-27501511 | MS.gene76883:CDS |
| CTAGAACAGAATCATGACAT+TGG | 0.599604 | 3.3:-27501514 | MS.gene76883:CDS |
| TTCATGGTAGAACTCCTCGA+TGG | 0.601727 | 3.3:+27497729 | None:intergenic |
| TTTGTGGAAATAATTTGAAG+TGG | 0.603574 | 3.3:-27501195 | MS.gene76883:CDS |
| AAATCTCCAATATCATGAGT+AGG | 0.603660 | 3.3:+27497688 | None:intergenic |
| GGAGACATATCGAGACTCAT+GGG | 0.605682 | 3.3:-27496414 | MS.gene76883:CDS |
| TAAGTATTTCAACATGGCCA+GGG | 0.607233 | 3.3:+27501314 | None:intergenic |
| AGAACTAGTGGGAATAGCAA+AGG | 0.607437 | 3.3:-27500279 | MS.gene76883:CDS |
| TCTCTTGATACTATAACTGA+GGG | 0.608259 | 3.3:-27500236 | MS.gene76883:CDS |
| AAAAGTATTGCCATCATGGG+AGG | 0.610259 | 3.3:-27497764 | MS.gene76883:CDS |
| TTGGTTCGTCTCGGAAACCA+TGG | 0.616433 | 3.3:+27501624 | None:intergenic |
| GAGATGGAGAAAGTAAAGGG+TGG | 0.617386 | 3.3:+27498361 | None:intergenic |
| AGTGAAGTAAGGACTTTGAA+GGG | 0.617403 | 3.3:+27496367 | None:intergenic |
| TGGTTGAGCGTAATGACCAG+TGG | 0.620721 | 3.3:+27501105 | None:intergenic |
| ATATGTCTCCAAGTTAACAA+TGG | 0.636025 | 3.3:+27496427 | None:intergenic |
| GACAAATATGGTGAGAATGT+AGG | 0.639510 | 3.3:-27496506 | MS.gene76883:CDS |
| CCAAGAAAGGTAGAGACATG+AGG | 0.642980 | 3.3:-27501342 | MS.gene76883:CDS |
| AGACTCATGGGATGATGATG+AGG | 0.660730 | 3.3:-27496402 | MS.gene76883:CDS |
| GATACATAAGTATTTCAACA+TGG | 0.661901 | 3.3:+27501308 | None:intergenic |
| ATAGCAAATATACCTCATTG+TGG | 0.662065 | 3.3:+27500665 | None:intergenic |
| TCCAGAACCATTCCACAATG+AGG | 0.662680 | 3.3:-27500677 | MS.gene76883:intron |
| ACTCTATTGTGTATTGTACA+GGG | 0.671646 | 3.3:-27499027 | MS.gene76883:intron |
| TCTTTGAGTCCCAAGCAATG+TGG | 0.679786 | 3.3:-27497810 | MS.gene76883:CDS |
| GGTTATAGAAGATGACAGAG+TGG | 0.685485 | 3.3:-27498406 | MS.gene76883:CDS |
| TGATGATGAGGTGCTCCAAG+AGG | 0.686965 | 3.3:-27496390 | MS.gene76883:CDS |
| AGAAAGGTAGAGACATGAGG+AGG | 0.707282 | 3.3:-27501339 | MS.gene76883:CDS |
| ATCATGACATTGGAGGACAA+TGG | 0.715553 | 3.3:-27501504 | MS.gene76883:CDS |
| TTATAGAAGATGACAGAGTG+GGG | 0.721299 | 3.3:-27498404 | MS.gene76883:CDS |
| AATCTCCAAGAGAAGTCATG+GGG | 0.726188 | 3.3:-27501387 | MS.gene76883:CDS |
| GGAAATGATGAAATCCATCG+AGG | 0.746562 | 3.3:-27497743 | MS.gene76883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACAAAATCT+TGG | - | chr3.3:27500315-27500334 | MS.gene76883:CDS | 10.0% |
| !! | AAGAAAAATGTATAAATATA+GGG | - | chr3.3:27499271-27499290 | MS.gene76883:intron | 10.0% |
| !! | ATGATATTTGAATAATAATT+TGG | - | chr3.3:27498669-27498688 | MS.gene76883:intron | 10.0% |
| !! | ATTATTAATTAGAGTTATAA+AGG | - | chr3.3:27499330-27499349 | MS.gene76883:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAT+AGG | - | chr3.3:27499270-27499289 | MS.gene76883:intron | 10.0% |
| !! | TGATATTTGAATAATAATTT+GGG | - | chr3.3:27498670-27498689 | MS.gene76883:intron | 10.0% |
| !! | TTATTAATTAGAGTTATAAA+GGG | - | chr3.3:27499331-27499350 | MS.gene76883:intron | 10.0% |
| !!! | TAAGAAAATATATTTTTCTA+TGG | + | chr3.3:27500583-27500602 | None:intergenic | 10.0% |
| !!! | TTTTATTAAATAAAGTAGTT+GGG | - | chr3.3:27498536-27498555 | MS.gene76883:intron | 10.0% |
| !!! | TTTTTTACTATTTTGATAAA+AGG | + | chr3.3:27500654-27500673 | None:intergenic | 10.0% |
| !! | AAAATTCTTAAAATGTCATA+AGG | - | chr3.3:27500670-27500689 | MS.gene76883:intron | 15.0% |
| !! | AAATTCTTAAAATGTCATAA+GGG | - | chr3.3:27500671-27500690 | MS.gene76883:intron | 15.0% |
| !! | AATATAATATCATACGAAAA+TGG | - | chr3.3:27501125-27501144 | MS.gene76883:CDS | 15.0% |
| !! | AATTAAACAAATTTGAATTG+AGG | - | chr3.3:27498351-27498370 | MS.gene76883:CDS | 15.0% |
| !! | AATTATAGAGTATACTAATA+CGG | - | chr3.3:27497930-27497949 | MS.gene76883:intron | 15.0% |
| !! | ACACTTCTAATTAAAAATAT+GGG | - | chr3.3:27499766-27499785 | MS.gene76883:intron | 15.0% |
| !! | AGAAAAATGTATAAATATAG+GGG | - | chr3.3:27499272-27499291 | MS.gene76883:intron | 15.0% |
| !! | AGAACTATTAAAATTAAGTA+AGG | - | chr3.3:27498419-27498438 | MS.gene76883:CDS | 15.0% |
| !! | ATAATTATATATTAATGCTC+AGG | - | chr3.3:27497220-27497239 | MS.gene76883:intron | 15.0% |
| !! | CAATTGAAAAATTAGTTATA+AGG | - | chr3.3:27499675-27499694 | MS.gene76883:intron | 15.0% |
| !! | GTGCATATTATAAAATTTAA+TGG | + | chr3.3:27500375-27500394 | None:intergenic | 15.0% |
| !! | TATGATGATAAAAATATAGA+AGG | - | chr3.3:27496490-27496509 | MS.gene76883:CDS | 15.0% |
| !! | TATTAATTAGAGTTATAAAG+GGG | - | chr3.3:27499332-27499351 | MS.gene76883:intron | 15.0% |
| !! | TCATCTAAAAATACTTATTT+GGG | - | chr3.3:27500838-27500857 | MS.gene76883:intron | 15.0% |
| !! | TCTATAATACATGTAAATAA+TGG | - | chr3.3:27497537-27497556 | MS.gene76883:intron | 15.0% |
| !! | TGACAATAAAAAACTATTAA+TGG | + | chr3.3:27500700-27500719 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+GGG | + | chr3.3:27498094-27498113 | None:intergenic | 15.0% |
| !! | TTCATCTAAAAATACTTATT+TGG | - | chr3.3:27500837-27500856 | MS.gene76883:intron | 15.0% |
| !!! | ATACAAGACTTTTATTTATA+TGG | - | chr3.3:27497073-27497092 | MS.gene76883:intron | 15.0% |
| !!! | ATTTTCTCATAATAAGTAAA+GGG | - | chr3.3:27497138-27497157 | MS.gene76883:intron | 15.0% |
| !!! | CTTTTATTAAATAAAGTAGT+TGG | - | chr3.3:27498535-27498554 | MS.gene76883:intron | 15.0% |
| !!! | TAGAAGTAATTTTTTTTGTA+GGG | + | chr3.3:27498034-27498053 | None:intergenic | 15.0% |
| !!! | TTAGAAGTAATTTTTTTTGT+AGG | + | chr3.3:27498035-27498054 | None:intergenic | 15.0% |
| !!! | TTTTTAACAAAACAATATCT+TGG | - | chr3.3:27500346-27500365 | MS.gene76883:intron | 15.0% |
| !! | AAAAGTGGAATATATTGAAT+TGG | - | chr3.3:27499356-27499375 | MS.gene76883:intron | 20.0% |
| !! | AAACCTATGAAAATTAAGTA+AGG | + | chr3.3:27498005-27498024 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr3.3:27499295-27499314 | MS.gene76883:intron | 20.0% |
| !! | AATTATCTGATTGTAATATG+AGG | - | chr3.3:27501264-27501283 | MS.gene76883:CDS | 20.0% |
| !! | AGAGATATAATTGTGATATA+TGG | + | chr3.3:27497420-27497439 | None:intergenic | 20.0% |
| !! | ATACGAAAATGGTATTATTT+GGG | - | chr3.3:27501136-27501155 | MS.gene76883:CDS | 20.0% |
| !! | ATTATAATTATCAATACCTG+TGG | + | chr3.3:27497801-27497820 | None:intergenic | 20.0% |
| !! | ATTATAGAGTATACTAATAC+GGG | - | chr3.3:27497931-27497950 | MS.gene76883:intron | 20.0% |
| !! | ATTATATTAAGTGTGGTTTA+AGG | - | chr3.3:27497884-27497903 | MS.gene76883:intron | 20.0% |
| !! | ATTGAGATAAATAATGCATA+AGG | - | chr3.3:27498562-27498581 | MS.gene76883:intron | 20.0% |
| !! | CATCTAAAAATACTTATTTG+GGG | - | chr3.3:27500839-27500858 | MS.gene76883:intron | 20.0% |
| !! | GAAAAAAATATACAAAGACT+TGG | + | chr3.3:27497099-27497118 | None:intergenic | 20.0% |
| !! | GACACTTCTAATTAAAAATA+TGG | - | chr3.3:27499765-27499784 | MS.gene76883:intron | 20.0% |
| !! | GTTCAAAAATTTAAGAGTTT+AGG | + | chr3.3:27498095-27498114 | None:intergenic | 20.0% |
| !! | TATATAGTAACGTGTTATAT+TGG | - | chr3.3:27498845-27498864 | MS.gene76883:intron | 20.0% |
| !! | TCATTTATGGAAAAATGAAA+AGG | - | chr3.3:27501387-27501406 | MS.gene76883:CDS | 20.0% |
| !! | TGAATATGATATAAAGAAAC+AGG | - | chr3.3:27496967-27496986 | MS.gene76883:intron | 20.0% |
| !! | TTTATTTATATAACAGGTTG+TGG | - | chr3.3:27497626-27497645 | MS.gene76883:intron | 20.0% |
| !! | TTTGGTCACAAAAAAAAAAA+AGG | - | chr3.3:27499012-27499031 | MS.gene76883:intron | 20.0% |
| !! | TTTGTTAGATTTCAACTAAT+GGG | - | chr3.3:27500487-27500506 | MS.gene76883:intron | 20.0% |
| !!! | AATACATGTAAATAATGGAA+GGG | - | chr3.3:27497542-27497561 | MS.gene76883:intron | 20.0% |
| !!! | ACATTTGATATACATACTTT+TGG | + | chr3.3:27500092-27500111 | None:intergenic | 20.0% |
| !!! | AGAGAATGAACAATTTTAAA+AGG | + | chr3.3:27500913-27500932 | None:intergenic | 20.0% |
| !!! | ATCTAAAAGATTTTTGTGAA+TGG | - | chr3.3:27496680-27496699 | MS.gene76883:intron | 20.0% |
| !!! | ATTTGTTAGATTTCAACTAA+TGG | - | chr3.3:27500486-27500505 | MS.gene76883:intron | 20.0% |
| !!! | ATTTTTCAATTGCTGATTTT+AGG | + | chr3.3:27499667-27499686 | None:intergenic | 20.0% |
| !!! | CATTTTCTCATAATAAGTAA+AGG | - | chr3.3:27497137-27497156 | MS.gene76883:intron | 20.0% |
| !!! | GAGAATGAACAATTTTAAAA+GGG | + | chr3.3:27500912-27500931 | None:intergenic | 20.0% |
| !!! | TAATACATGTAAATAATGGA+AGG | - | chr3.3:27497541-27497560 | MS.gene76883:intron | 20.0% |
| !!! | TGTTTTTGAAATTCATCAAT+TGG | - | chr3.3:27499486-27499505 | MS.gene76883:intron | 20.0% |
| !!! | TTAGGTTAATTACCTTTTTA+GGG | + | chr3.3:27499649-27499668 | None:intergenic | 20.0% |
| !!! | TTCATTTTTCCATAAATGAA+TGG | + | chr3.3:27501386-27501405 | None:intergenic | 20.0% |
| !!! | TTTAGGTTAATTACCTTTTT+AGG | + | chr3.3:27499650-27499669 | None:intergenic | 20.0% |
| ! | AAAAGATTCAAAACAAATCG+AGG | + | chr3.3:27500760-27500779 | None:intergenic | 25.0% |
| ! | AAACAAATTTGAATTGAGGA+GGG | - | chr3.3:27498355-27498374 | MS.gene76883:CDS | 25.0% |
| ! | AAAGATTCAAAACAAATCGA+GGG | + | chr3.3:27500759-27500778 | None:intergenic | 25.0% |
| ! | AAATATCATCTCTCTTTAAC+AGG | - | chr3.3:27498817-27498836 | MS.gene76883:intron | 25.0% |
| ! | AAATCCCACTAATTTGAAAA+GGG | + | chr3.3:27500470-27500489 | None:intergenic | 25.0% |
| ! | AAGTAAGGACTAAACTTAAA+AGG | - | chr3.3:27498434-27498453 | MS.gene76883:CDS | 25.0% |
| ! | AATAAGTGTGAAATGAATCA+AGG | + | chr3.3:27499251-27499270 | None:intergenic | 25.0% |
| ! | AATACTAGGGTTAATTATGT+TGG | - | chr3.3:27496730-27496749 | MS.gene76883:intron | 25.0% |
| ! | AATATCATCTCTCTTTAACA+GGG | - | chr3.3:27498818-27498837 | MS.gene76883:intron | 25.0% |
| ! | AATTAACTCCATTGTTAACT+TGG | - | chr3.3:27501533-27501552 | MS.gene76883:CDS | 25.0% |
| ! | AGGACTAAAGAAATAGTATT+TGG | - | chr3.3:27498994-27499013 | MS.gene76883:intron | 25.0% |
| ! | ATAAGTGTGAAATGAATCAA+GGG | + | chr3.3:27499250-27499269 | None:intergenic | 25.0% |
| ! | ATATAAAGAAACAGGAAGAA+AGG | - | chr3.3:27496975-27496994 | MS.gene76883:intron | 25.0% |
| ! | ATTTACATGTATTATAGAGC+AGG | + | chr3.3:27497535-27497554 | None:intergenic | 25.0% |
| ! | CATAACTACTTTACTCTAAA+AGG | + | chr3.3:27499195-27499214 | None:intergenic | 25.0% |
| ! | CATACGAAAATGGTATTATT+TGG | - | chr3.3:27501135-27501154 | MS.gene76883:CDS | 25.0% |
| ! | CTTCATACCGAATATATAAA+TGG | - | chr3.3:27499713-27499732 | MS.gene76883:intron | 25.0% |
| ! | GATACATAAGTATTTCAACA+TGG | + | chr3.3:27496663-27496682 | None:intergenic | 25.0% |
| ! | GCAGAAGAAAAAAAACTTAA+GGG | - | chr3.3:27498391-27498410 | MS.gene76883:CDS | 25.0% |
| ! | GTCATAGAGAAATTCTAATA+TGG | - | chr3.3:27498967-27498986 | MS.gene76883:intron | 25.0% |
| ! | GTTAACAATGGAGTTAATTA+TGG | + | chr3.3:27501532-27501551 | None:intergenic | 25.0% |
| ! | TAAAAATACTTATTTGGGGA+AGG | - | chr3.3:27500843-27500862 | MS.gene76883:intron | 25.0% |
| ! | TAAACAAATTTGAATTGAGG+AGG | - | chr3.3:27498354-27498373 | MS.gene76883:CDS | 25.0% |
| ! | TATATATTAATGCTCAGGAA+TGG | - | chr3.3:27497225-27497244 | MS.gene76883:intron | 25.0% |
| ! | TCAGAAGCCATTTATATATT+CGG | + | chr3.3:27499723-27499742 | None:intergenic | 25.0% |
| ! | TGCAGAAGAAAAAAAACTTA+AGG | - | chr3.3:27498390-27498409 | MS.gene76883:CDS | 25.0% |
| ! | TTGTTAGATTTCAACTAATG+GGG | - | chr3.3:27500488-27500507 | MS.gene76883:intron | 25.0% |
| ! | TTTATAATGTAATACTCCAG+AGG | - | chr3.3:27497001-27497020 | MS.gene76883:intron | 25.0% |
| ! | TTTGTGGAAATAATTTGAAG+TGG | - | chr3.3:27496773-27496792 | MS.gene76883:intron | 25.0% |
| !! | AAACAAACTTTGTTGTAACA+AGG | + | chr3.3:27498065-27498084 | None:intergenic | 25.0% |
| !! | AAAGATTTTTGTGAATGGTT+TGG | - | chr3.3:27496685-27496704 | MS.gene76883:intron | 25.0% |
| !! | AAGATTTTTGTGAATGGTTT+GGG | - | chr3.3:27496686-27496705 | MS.gene76883:intron | 25.0% |
| !! | AGTAGGGTTAAATATGTTTT+TGG | + | chr3.3:27498477-27498496 | None:intergenic | 25.0% |
| !! | AGTCCTTACTTAATTTTCAT+AGG | - | chr3.3:27497999-27498018 | MS.gene76883:intron | 25.0% |
| !! | TAAAAGGTCCCAATTTTATA+GGG | - | chr3.3:27498450-27498469 | MS.gene76883:CDS | 25.0% |
| !! | TTAAAAGGTCCCAATTTTAT+AGG | - | chr3.3:27498449-27498468 | MS.gene76883:CDS | 25.0% |
| !! | TTGTGGAAATAATTTGAAGT+GGG | - | chr3.3:27496774-27496793 | MS.gene76883:intron | 25.0% |
| !!! | TAAAAGTTCCCAGTTTTATA+GGG | + | chr3.3:27497974-27497993 | None:intergenic | 25.0% |
| !!! | TGCATACTTTTTAGTTTCAA+TGG | - | chr3.3:27500061-27500080 | MS.gene76883:intron | 25.0% |
| !!! | TTAAAAGTTCCCAGTTTTAT+AGG | + | chr3.3:27497975-27497994 | None:intergenic | 25.0% |
| !!! | TTTATGACAATTTTTTGCAG+AGG | - | chr3.3:27498263-27498282 | MS.gene76883:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr3.3:27498461-27498480 | None:intergenic | 25.0% |
| AAATATACCTCATTGTGGAA+TGG | + | chr3.3:27497301-27497320 | None:intergenic | 30.0% | |
| AAATCTCCAATATCATGAGT+AGG | + | chr3.3:27500283-27500302 | None:intergenic | 30.0% | |
| AAATGCATAGTCACATTTAC+AGG | - | chr3.3:27497266-27497285 | MS.gene76883:intron | 30.0% | |
| AAGATTCAAAACAAATCGAG+GGG | + | chr3.3:27500758-27500777 | None:intergenic | 30.0% | |
| AATCAAGGGCTCAATTAATT+CGG | + | chr3.3:27499236-27499255 | None:intergenic | 30.0% | |
| ACTCTATTGTGTATTGTACA+GGG | - | chr3.3:27498941-27498960 | MS.gene76883:intron | 30.0% | |
| AGAAAAGAGTTTCTACCTAA+AGG | + | chr3.3:27496523-27496542 | None:intergenic | 30.0% | |
| AGAAATTCTAATATGGTCAC+AGG | - | chr3.3:27498974-27498993 | MS.gene76883:intron | 30.0% | |
| AGATATAGCAATAGAACTAG+TGG | - | chr3.3:27497677-27497696 | MS.gene76883:intron | 30.0% | |
| AGATGATAAGGTTCAATACT+AGG | - | chr3.3:27496716-27496735 | MS.gene76883:intron | 30.0% | |
| AGTAAATGACTCAGTTAATC+CGG | - | chr3.3:27499439-27499458 | MS.gene76883:intron | 30.0% | |
| ATAGCAAATATACCTCATTG+TGG | + | chr3.3:27497306-27497325 | None:intergenic | 30.0% | |
| ATATCATCTCTCTTTAACAG+GGG | - | chr3.3:27498819-27498838 | MS.gene76883:intron | 30.0% | |
| ATATGTCTCCAAGTTAACAA+TGG | + | chr3.3:27501544-27501563 | None:intergenic | 30.0% | |
| ATCTCTATAAATTATCCACG+TGG | - | chr3.3:27497463-27497482 | MS.gene76883:intron | 30.0% | |
| ATCTCTTGATACTATAACTG+AGG | - | chr3.3:27497731-27497750 | MS.gene76883:CDS | 30.0% | |
| ATGCCTATAAAAGTAAGAGA+TGG | + | chr3.3:27499626-27499645 | None:intergenic | 30.0% | |
| ATTTATATAACAGGTTGTGG+TGG | - | chr3.3:27497629-27497648 | MS.gene76883:intron | 30.0% | |
| CAAATCCCACTAATTTGAAA+AGG | + | chr3.3:27500471-27500490 | None:intergenic | 30.0% | |
| CTGTCTCATTATATTAAGTG+TGG | - | chr3.3:27497877-27497896 | MS.gene76883:intron | 30.0% | |
| GAAAAGAGTTTCTACCTAAA+GGG | + | chr3.3:27496522-27496541 | None:intergenic | 30.0% | |
| GAAAATCATGTCACCTTTAA+TGG | + | chr3.3:27496899-27496918 | None:intergenic | 30.0% | |
| GAAGCCATCTATGTATAAAT+AGG | + | chr3.3:27500397-27500416 | None:intergenic | 30.0% | |
| GAGTTTGTCATCATAATTAG+AGG | - | chr3.3:27498645-27498664 | MS.gene76883:intron | 30.0% | |
| GATATAGCAATAGAACTAGT+GGG | - | chr3.3:27497678-27497697 | MS.gene76883:intron | 30.0% | |
| GATGATAAGGTTCAATACTA+GGG | - | chr3.3:27496717-27496736 | MS.gene76883:intron | 30.0% | |
| GTGCATGATTGAATAAGATA+TGG | - | chr3.3:27501301-27501320 | MS.gene76883:CDS | 30.0% | |
| GTTTGTATATGAGTATGAGT+AGG | - | chr3.3:27499994-27500013 | MS.gene76883:intron | 30.0% | |
| TAAGAGATGGAGAAAGTAAA+GGG | + | chr3.3:27499613-27499632 | None:intergenic | 30.0% | |
| TACACCAATAATTCTGATGT+AGG | + | chr3.3:27501341-27501360 | None:intergenic | 30.0% | |
| TAGCAAAACCCATTAACTAT+TGG | - | chr3.3:27497035-27497054 | MS.gene76883:intron | 30.0% | |
| TAGTCCTACATCAGAATTAT+TGG | - | chr3.3:27501334-27501353 | MS.gene76883:CDS | 30.0% | |
| TCTCTTGATACTATAACTGA+GGG | - | chr3.3:27497732-27497751 | MS.gene76883:CDS | 30.0% | |
| TGCACCTATTTATACATAGA+TGG | - | chr3.3:27500390-27500409 | MS.gene76883:intron | 30.0% | |
| TGTATAAATATAGGGGAAAG+TGG | - | chr3.3:27499279-27499298 | MS.gene76883:intron | 30.0% | |
| TGTTAGATTTCAACTAATGG+GGG | - | chr3.3:27500489-27500508 | MS.gene76883:intron | 30.0% | |
| TGTTCATTCTCTTATCTCAA+CGG | - | chr3.3:27500921-27500940 | MS.gene76883:intron | 30.0% | |
| TTCTTGCACCAATAGTTAAT+GGG | + | chr3.3:27497046-27497065 | None:intergenic | 30.0% | |
| TTGAATAAGATATGGTCCAT+TGG | - | chr3.3:27501309-27501328 | MS.gene76883:CDS | 30.0% | |
| TTGCAGTATTGTGACAAATA+TGG | - | chr3.3:27501450-27501469 | MS.gene76883:CDS | 30.0% | |
| TTTCTTGCACCAATAGTTAA+TGG | + | chr3.3:27497047-27497066 | None:intergenic | 30.0% | |
| ! | ACTTTTCTCCATTCTTGTAA+TGG | + | chr3.3:27501495-27501514 | None:intergenic | 30.0% |
| ! | ATGAGTGTACTACAGATTTT+AGG | - | chr3.3:27500127-27500146 | MS.gene76883:intron | 30.0% |
| ! | ATTAAGTGTGGTTTAAGGTT+AGG | - | chr3.3:27497889-27497908 | MS.gene76883:intron | 30.0% |
| ! | TAGGTACTTGGTAGATTTTA+AGG | - | chr3.3:27500013-27500032 | MS.gene76883:intron | 30.0% |
| ! | TCATATGTGTTAGCGTTTTA+TGG | - | chr3.3:27499893-27499912 | MS.gene76883:intron | 30.0% |
| ! | TCATGATATTGGAGATTTTG+AGG | - | chr3.3:27500285-27500304 | MS.gene76883:CDS | 30.0% |
| ! | TTGTCATGTCTAACTTTTCT+AGG | - | chr3.3:27500714-27500733 | MS.gene76883:CDS | 30.0% |
| ! | TTTCCATTTTCTACCAAGAA+AGG | - | chr3.3:27496613-27496632 | MS.gene76883:intron | 30.0% |
| ! | TTTTATAGGCATCCCTAAAA+AGG | - | chr3.3:27499634-27499653 | MS.gene76883:intron | 30.0% |
| ! | TTTTTCTCAAATAGACGTGT+CGG | - | chr3.3:27499855-27499874 | MS.gene76883:intron | 30.0% |
| !! | ATACGGGCTAAATATGTTTT+TGG | - | chr3.3:27497947-27497966 | MS.gene76883:intron | 30.0% |
| !! | CTAGTTCTATTGCTATATCT+TGG | + | chr3.3:27497677-27497696 | None:intergenic | 30.0% |
| !! | GAAAAAAGTATTGCCATCAT+GGG | - | chr3.3:27500201-27500220 | MS.gene76883:CDS | 30.0% |
| !! | TCATCAATTGGTTGTTTTGT+AGG | - | chr3.3:27499498-27499517 | MS.gene76883:intron | 30.0% |
| !! | TCTCCATCTCTTACTTTTAT+AGG | - | chr3.3:27499620-27499639 | MS.gene76883:intron | 30.0% |
| !! | TTTTTGGTCCCTATAAAACT+GGG | - | chr3.3:27497963-27497982 | MS.gene76883:intron | 30.0% |
| !!! | GGTTTAAGCACTTTTTAAGT+CGG | + | chr3.3:27501015-27501034 | None:intergenic | 30.0% |
| !!! | GTTTAAGCACTTTTTAAGTC+GGG | + | chr3.3:27501014-27501033 | None:intergenic | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr3.3:27498462-27498481 | None:intergenic | 30.0% |
| AAATACTTATTTGGGGAAGG+TGG | - | chr3.3:27500846-27500865 | MS.gene76883:intron | 35.0% | |
| AGTGAAGTAAGGACTTTGAA+GGG | + | chr3.3:27501604-27501623 | None:intergenic | 35.0% | |
| AGTTAACTCACGCTGAATTA+AGG | - | chr3.3:27501086-27501105 | MS.gene76883:CDS | 35.0% | |
| ATAAGTATTTCAACATGGCC+AGG | + | chr3.3:27496658-27496677 | None:intergenic | 35.0% | |
| ATCAAGGGCTCAATTAATTC+GGG | + | chr3.3:27499235-27499254 | None:intergenic | 35.0% | |
| ATCATGTCACCTTTAATGGA+TGG | + | chr3.3:27496895-27496914 | None:intergenic | 35.0% | |
| ATGGAGCGGGTAATAATTAA+AGG | - | chr3.3:27499463-27499482 | MS.gene76883:intron | 35.0% | |
| CAAAGAGAAGGATTGTGATA+AGG | - | chr3.3:27496807-27496826 | MS.gene76883:intron | 35.0% | |
| CCAAAATTGCCATCCATTAA+AGG | - | chr3.3:27496883-27496902 | MS.gene76883:intron | 35.0% | |
| CTACCTTTCTTGGTAGAAAA+TGG | + | chr3.3:27496619-27496638 | None:intergenic | 35.0% | |
| CTAGAACAGAATCATGACAT+TGG | - | chr3.3:27496454-27496473 | MS.gene76883:CDS | 35.0% | |
| CTATGGTTGATTGTGCTTAA+TGG | + | chr3.3:27500566-27500585 | None:intergenic | 35.0% | |
| GACAAATATGGTGAGAATGT+AGG | - | chr3.3:27501462-27501481 | MS.gene76883:CDS | 35.0% | |
| GACTCTATTGTGTATTGTAC+AGG | - | chr3.3:27498940-27498959 | MS.gene76883:intron | 35.0% | |
| GAGTTATAAAGGGGAAAAAG+TGG | - | chr3.3:27499341-27499360 | MS.gene76883:intron | 35.0% | |
| GCAAGAGAGATAAGAAAAGA+AGG | - | chr3.3:27496415-27496434 | MS.gene76883:CDS | 35.0% | |
| GCATACATCTGATCTTGATT+TGG | + | chr3.3:27501199-27501218 | None:intergenic | 35.0% | |
| GTAAATGACTCAGTTAATCC+GGG | - | chr3.3:27499440-27499459 | MS.gene76883:intron | 35.0% | |
| GTAAGAGATGGAGAAAGTAA+AGG | + | chr3.3:27499614-27499633 | None:intergenic | 35.0% | |
| GTTATAGAAGATGACAGAGT+GGG | - | chr3.3:27499563-27499582 | MS.gene76883:intron | 35.0% | |
| TAAGTATTTCAACATGGCCA+GGG | + | chr3.3:27496657-27496676 | None:intergenic | 35.0% | |
| TATGAGAAAATGTCGCACAT+CGG | + | chr3.3:27497129-27497148 | None:intergenic | 35.0% | |
| TATGAGTATGAGTAGGTACT+TGG | - | chr3.3:27500001-27500020 | MS.gene76883:intron | 35.0% | |
| TCCATAAATGAATGGAGCTA+CGG | + | chr3.3:27501378-27501397 | None:intergenic | 35.0% | |
| TCGAAGAATGTGTGTGTAAT+CGG | - | chr3.3:27496367-27496386 | MS.gene76883:CDS | 35.0% | |
| TTACACACACATTCTTCGAT+TGG | + | chr3.3:27496366-27496385 | None:intergenic | 35.0% | |
| TTATAGAAGATGACAGAGTG+GGG | - | chr3.3:27499564-27499583 | MS.gene76883:intron | 35.0% | |
| TTATCAATACCTGTGGATGA+AGG | + | chr3.3:27497794-27497813 | None:intergenic | 35.0% | |
| TTCTATAACCACCATTCCTT+TGG | + | chr3.3:27499552-27499571 | None:intergenic | 35.0% | |
| TTCTCCATTCTTGTAATGGT+GGG | + | chr3.3:27501491-27501510 | None:intergenic | 35.0% | |
| TTGGGTTAAGAGAGATGATA+AGG | - | chr3.3:27496704-27496723 | MS.gene76883:intron | 35.0% | |
| TTTCTCCATTCTTGTAATGG+TGG | + | chr3.3:27501492-27501511 | None:intergenic | 35.0% | |
| ! | ACACTCCCTTTTCAAATTAG+TGG | - | chr3.3:27500462-27500481 | MS.gene76883:intron | 35.0% |
| ! | CACTCCCTTTTCAAATTAGT+GGG | - | chr3.3:27500463-27500482 | MS.gene76883:intron | 35.0% |
| ! | CTTGATGATTATCGTGTTTG+TGG | - | chr3.3:27496757-27496776 | MS.gene76883:intron | 35.0% |
| ! | CTTTTGACAGCTTGATTTAC+TGG | + | chr3.3:27499044-27499063 | None:intergenic | 35.0% |
| ! | GGAAGGGTAATTTTCATAGA+TGG | - | chr3.3:27498901-27498920 | MS.gene76883:intron | 35.0% |
| ! | TTTTCTTGACACCAAAGGAA+TGG | - | chr3.3:27499538-27499557 | MS.gene76883:intron | 35.0% |
| !! | ACAAAAGCTTTGGAAGCTTT+AGG | - | chr3.3:27497568-27497587 | MS.gene76883:intron | 35.0% |
| !! | ATTCCTTTGGTGTCAAGAAA+AGG | + | chr3.3:27499539-27499558 | None:intergenic | 35.0% |
| !! | CAAAAGCTTTGGAAGCTTTA+GGG | - | chr3.3:27497569-27497588 | MS.gene76883:intron | 35.0% |
| !! | CCTTTAATGGATGGCAATTT+TGG | + | chr3.3:27496886-27496905 | None:intergenic | 35.0% |
| !! | GGAAAAAAGTATTGCCATCA+TGG | - | chr3.3:27500200-27500219 | MS.gene76883:CDS | 35.0% |
| !! | TACATCTGATCTTGATTTGG+CGG | + | chr3.3:27501196-27501215 | None:intergenic | 35.0% |
| !! | TTCCTTTGGTGTCAAGAAAA+GGG | + | chr3.3:27499538-27499557 | None:intergenic | 35.0% |
| !!! | CACACTAGCACTTTTAAGAT+TGG | + | chr3.3:27501036-27501055 | None:intergenic | 35.0% |
| !!! | GTTTTTGGTCCCTATAAAAC+TGG | - | chr3.3:27497962-27497981 | MS.gene76883:intron | 35.0% |
| !!! | TCTAATTACTTTTTGCCACG+TGG | + | chr3.3:27497481-27497500 | None:intergenic | 35.0% |
| AACGGAAGTTAACTCACGTT+CGG | - | chr3.3:27500939-27500958 | MS.gene76883:intron | 40.0% | |
| AATCTCCAAGAGAAGTCATG+GGG | - | chr3.3:27496581-27496600 | MS.gene76883:intron | 40.0% | |
| AATGCTCAGGAATGGATACA+TGG | - | chr3.3:27497233-27497252 | MS.gene76883:intron | 40.0% | |
| ACAATCTCCAAGAGAAGTCA+TGG | - | chr3.3:27496579-27496598 | MS.gene76883:intron | 40.0% | |
| AGAACTAGTGGGAATAGCAA+AGG | - | chr3.3:27497689-27497708 | MS.gene76883:CDS | 40.0% | |
| AGTCCTTACTTCACTCAACT+TGG | - | chr3.3:27501609-27501628 | MS.gene76883:CDS | 40.0% | |
| ATAGAAGGTGAAGACCCTTT+AGG | - | chr3.3:27496505-27496524 | MS.gene76883:CDS | 40.0% | |
| ATCATGACATTGGAGGACAA+TGG | - | chr3.3:27496464-27496483 | MS.gene76883:CDS | 40.0% | |
| ATTGAGCTATCCACATTGCT+TGG | + | chr3.3:27500171-27500190 | None:intergenic | 40.0% | |
| ATTGCTTGGGACTCAAAGAA+AGG | + | chr3.3:27500157-27500176 | None:intergenic | 40.0% | |
| CAATCATGCACTTGTAGATC+TGG | + | chr3.3:27501292-27501311 | None:intergenic | 40.0% | |
| CAATCTCCAAGAGAAGTCAT+GGG | - | chr3.3:27496580-27496599 | MS.gene76883:intron | 40.0% | |
| CCATAAATGAATGGAGCTAC+GGG | + | chr3.3:27501377-27501396 | None:intergenic | 40.0% | |
| GAACAGAATCATGACATTGG+AGG | - | chr3.3:27496457-27496476 | MS.gene76883:CDS | 40.0% | |
| GAAGGATTGTGATAAGGTTG+TGG | - | chr3.3:27496813-27496832 | MS.gene76883:intron | 40.0% | |
| GAGTGAAGTAAGGACTTTGA+AGG | + | chr3.3:27501605-27501624 | None:intergenic | 40.0% | |
| GGAAATGATGAAATCCATCG+AGG | - | chr3.3:27500225-27500244 | MS.gene76883:CDS | 40.0% | |
| GGATAGCTCAATTGCTTTCT+GGG | - | chr3.3:27500179-27500198 | MS.gene76883:intron | 40.0% | |
| GGCATTCCTACTCATGATAT+TGG | - | chr3.3:27500274-27500293 | MS.gene76883:CDS | 40.0% | |
| GGTTATAGAAGATGACAGAG+TGG | - | chr3.3:27499562-27499581 | MS.gene76883:intron | 40.0% | |
| GGTTGTTAGAAGCAAAGAGA+AGG | - | chr3.3:27496795-27496814 | MS.gene76883:intron | 40.0% | |
| GTATTATAGAGCAGGACTGT+CGG | + | chr3.3:27497527-27497546 | None:intergenic | 40.0% | |
| GTCAAGAAAAGGGAAGCTAT+AGG | + | chr3.3:27499528-27499547 | None:intergenic | 40.0% | |
| GTGGTTGGAAATTCCTATAG+TGG | - | chr3.3:27497651-27497670 | MS.gene76883:intron | 40.0% | |
| TACCATGAAAGAGAAGTAGC+AGG | - | chr3.3:27500253-27500272 | MS.gene76883:CDS | 40.0% | |
| TATATAACAGGTTGTGGTGG+TGG | - | chr3.3:27497632-27497651 | MS.gene76883:intron | 40.0% | |
| TGCTATATCTTGGCCACTAT+AGG | + | chr3.3:27497667-27497686 | None:intergenic | 40.0% | |
| TGGATAGCTCAATTGCTTTC+TGG | - | chr3.3:27500178-27500197 | MS.gene76883:intron | 40.0% | |
| TTATCTCTCTTGCTGCTACT+AGG | + | chr3.3:27496408-27496427 | None:intergenic | 40.0% | |
| TTCATCATTTCCTCCCATGA+TGG | + | chr3.3:27500217-27500236 | None:intergenic | 40.0% | |
| TTGAGCTATCCACATTGCTT+GGG | + | chr3.3:27500170-27500189 | None:intergenic | 40.0% | |
| TTGCTTGGGACTCAAAGAAA+GGG | + | chr3.3:27500156-27500175 | None:intergenic | 40.0% | |
| TTGTGATAAGGTTGTGGAAG+AGG | - | chr3.3:27496819-27496838 | MS.gene76883:intron | 40.0% | |
| ! | AGTCCAAGTTGAGTGAAGTA+AGG | + | chr3.3:27501615-27501634 | None:intergenic | 40.0% |
| ! | TGGAAAGTGTGCTCATACAA+AGG | + | chr3.3:27499590-27499609 | None:intergenic | 40.0% |
| ! | TTCCCTTTTCTTGACACCAA+AGG | - | chr3.3:27499533-27499552 | MS.gene76883:intron | 40.0% |
| !! | AAAAGTATTGCCATCATGGG+AGG | - | chr3.3:27500204-27500223 | MS.gene76883:CDS | 40.0% |
| !! | ATTCTTCGATTGGTTCGTCT+CGG | + | chr3.3:27496356-27496375 | None:intergenic | 40.0% |
| AATGTGTGTGTAATCGGTGC+TGG | - | chr3.3:27496373-27496392 | MS.gene76883:CDS | 45.0% | |
| AATTATTACCCGCTCCATCC+CGG | + | chr3.3:27499461-27499480 | None:intergenic | 45.0% | |
| ACCTCATTGTGGAATGGTTC+TGG | + | chr3.3:27497295-27497314 | None:intergenic | 45.0% | |
| AGAAAGGTAGAGACATGAGG+AGG | - | chr3.3:27496629-27496648 | MS.gene76883:intron | 45.0% | |
| AGGGCTCAATTAATTCGGGA+CGG | + | chr3.3:27499231-27499250 | None:intergenic | 45.0% | |
| ATGACTCAGTTAATCCGGGA+TGG | - | chr3.3:27499444-27499463 | MS.gene76883:intron | 45.0% | |
| CCAAGAAAGGTAGAGACATG+AGG | - | chr3.3:27496626-27496645 | MS.gene76883:intron | 45.0% | |
| CCCGTAGCTCCATTCATTTA+TGG | - | chr3.3:27501374-27501393 | MS.gene76883:CDS | 45.0% | |
| CCTCATGTCTCTACCTTTCT+TGG | + | chr3.3:27496629-27496648 | None:intergenic | 45.0% | |
| CTGATGTAGGACTAGACCAA+TGG | + | chr3.3:27501328-27501347 | None:intergenic | 45.0% | |
| GACTCCCACCATTACAAGAA+TGG | - | chr3.3:27501484-27501503 | MS.gene76883:CDS | 45.0% | |
| GAGATGGAGAAAGTAAAGGG+TGG | + | chr3.3:27499610-27499629 | None:intergenic | 45.0% | |
| GGAGACATATCGAGACTCAT+GGG | - | chr3.3:27501554-27501573 | MS.gene76883:CDS | 45.0% | |
| TAAATGAATGGAGCTACGGG+TGG | + | chr3.3:27501374-27501393 | None:intergenic | 45.0% | |
| TACCCTTCCATCCTCTTCAA+GGG | + | chr3.3:27498890-27498909 | None:intergenic | 45.0% | |
| TCCAGAACCATTCCACAATG+AGG | - | chr3.3:27497291-27497310 | MS.gene76883:intron | 45.0% | |
| TCTTGACACCAAAGGAATGG+TGG | - | chr3.3:27499541-27499560 | MS.gene76883:intron | 45.0% | |
| TCTTTGAGTCCCAAGCAATG+TGG | - | chr3.3:27500158-27500177 | MS.gene76883:intron | 45.0% | |
| TGGAGACATATCGAGACTCA+TGG | - | chr3.3:27501553-27501572 | MS.gene76883:CDS | 45.0% | |
| TTACCCTTCCATCCTCTTCA+AGG | + | chr3.3:27498891-27498910 | None:intergenic | 45.0% | |
| TTCATGGTAGAACTCCTCGA+TGG | + | chr3.3:27500242-27500261 | None:intergenic | 45.0% | |
| ! | AGACTCATGGGATGATGATG+AGG | - | chr3.3:27501566-27501585 | MS.gene76883:CDS | 45.0% |
| ! | GGAAGAGGTTTTTGATGCAG+TGG | - | chr3.3:27496834-27496853 | MS.gene76883:intron | 45.0% |
| ! | GGAAGGGCATACAAAAGCTT+TGG | - | chr3.3:27497558-27497577 | MS.gene76883:intron | 45.0% |
| ! | TACCTGTGGATGAAGGTGTA+AGG | + | chr3.3:27497787-27497806 | None:intergenic | 45.0% |
| ! | TGCCTGCTACTTCTCTTTCA+TGG | + | chr3.3:27500258-27500277 | None:intergenic | 45.0% |
| !! | AATATAAAATTAACAAAATT+TGG | - | chr3.3:27498225-27498244 | MS.gene76883:intron | 5.0% |
| !! | TTAATTAATAAATATTAGTA+GGG | + | chr3.3:27498493-27498512 | None:intergenic | 5.0% |
| !! | TTTAATTAATAAATATTAGT+AGG | + | chr3.3:27498494-27498513 | None:intergenic | 5.0% |
| !!! | TATTTTTTTCTTTATTTTAT+TGG | - | chr3.3:27498711-27498730 | MS.gene76883:intron | 5.0% |
| !!! | TTTTTTTTTATTTATATAAC+AGG | - | chr3.3:27497620-27497639 | MS.gene76883:intron | 5.0% |
| ATAGACGCCCTTGAAGAGGA+TGG | - | chr3.3:27498880-27498899 | MS.gene76883:intron | 50.0% | |
| GACCTTACACCTTCATCCAC+AGG | - | chr3.3:27497782-27497801 | MS.gene76883:CDS | 50.0% | |
| GTGAACCCCATGACTTCTCT+TGG | + | chr3.3:27496589-27496608 | None:intergenic | 50.0% | |
| TCAGTTAATCCGGGATGGAG+CGG | - | chr3.3:27499449-27499468 | MS.gene76883:intron | 50.0% | |
| TGGTTGAGCGTAATGACCAG+TGG | + | chr3.3:27496866-27496885 | None:intergenic | 50.0% | |
| TGTCCAGTGATTTCGCTGTG+CGG | - | chr3.3:27499135-27499154 | MS.gene76883:intron | 50.0% | |
| ! | AAGGACTTTGAAGGGCCTCT+TGG | + | chr3.3:27501596-27501615 | None:intergenic | 50.0% |
| ! | TGATGATGAGGTGCTCCAAG+AGG | - | chr3.3:27501578-27501597 | MS.gene76883:CDS | 50.0% |
| !! | TAACAGGTTGTGGTGGTGGT+TGG | - | chr3.3:27497636-27497655 | MS.gene76883:intron | 50.0% |
| ACGCCCTTGAAGAGGATGGA+AGG | - | chr3.3:27498884-27498903 | MS.gene76883:intron | 55.0% | |
| AGAGACATGAGGAGGTTCCC+TGG | - | chr3.3:27496637-27496656 | MS.gene76883:intron | 55.0% | |
| AGTCCGCACAGCGAAATCAC+TGG | + | chr3.3:27499141-27499160 | None:intergenic | 55.0% | |
| CAGTTAATCCGGGATGGAGC+GGG | - | chr3.3:27499450-27499469 | MS.gene76883:intron | 55.0% | |
| CGCCCTTGAAGAGGATGGAA+GGG | - | chr3.3:27498885-27498904 | MS.gene76883:intron | 55.0% | |
| GATGCAGTGGTTGTTGCCAC+TGG | - | chr3.3:27496847-27496866 | MS.gene76883:intron | 55.0% | |
| GCAGATAGACGCCCTTGAAG+AGG | - | chr3.3:27498876-27498895 | MS.gene76883:intron | 55.0% | |
| CTTGCTGCTACTAGGCCTGC+TGG | + | chr3.3:27496400-27496419 | None:intergenic | 60.0% | |
| TGCTAGCGACGCGTTACCTC+TGG | + | chr3.3:27497020-27497039 | None:intergenic | 60.0% | |
| !! | GTAATCGGTGCTGGACCAGC+AGG | - | chr3.3:27496382-27496401 | MS.gene76883:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 27496346 | 27501644 | 27496346 | ID=MS.gene76883 |
| chr3.3 | mRNA | 27496346 | 27501644 | 27496346 | ID=MS.gene76883.t1;Parent=MS.gene76883 |
| chr3.3 | exon | 27501086 | 27501644 | 27501086 | ID=MS.gene76883.t1.exon1;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27501086 | 27501644 | 27501086 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27500678 | 27500748 | 27500678 | ID=MS.gene76883.t1.exon2;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27500678 | 27500748 | 27500678 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27500187 | 27500348 | 27500187 | ID=MS.gene76883.t1.exon3;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27500187 | 27500348 | 27500187 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27499028 | 27499110 | 27499028 | ID=MS.gene76883.t1.exon4;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27499028 | 27499110 | 27499028 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27498335 | 27498470 | 27498335 | ID=MS.gene76883.t1.exon5;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27498335 | 27498470 | 27498335 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27497684 | 27497848 | 27497684 | ID=MS.gene76883.t1.exon6;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27497684 | 27497848 | 27497684 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| chr3.3 | exon | 27496346 | 27496534 | 27496346 | ID=MS.gene76883.t1.exon7;Parent=MS.gene76883.t1 |
| chr3.3 | CDS | 27496346 | 27496534 | 27496346 | ID=cds.MS.gene76883.t1;Parent=MS.gene76883.t1 |
| Gene Sequence |
| Protein sequence |
