AlfalfaGEDB | MS.gene77774

M. sativa cultivar XinJiangDaYe / MS.gene77774

KEGG: -
GO: GO:0006950 GO:0006952 GO:0008150 GO:0050896
PFAM: PF00407.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77774.t1	XP_003628200.1	92.3	156	12	0	1	156	1	156	7.80E-81	309.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77774.t1	Q9SSK5	37.6	149	90	3	3	149	7	154	7.0e-22	105.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77774.t1	G7L7T5	92.3	156	12	0	1	156	1	156	5.6e-81	309.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04921	MS.gene77774	0.812533	4.04E-51	-1.69E-46
MS.gene04932	MS.gene77774	0.811182	7.96E-51	-1.69E-46
MS.gene049633	MS.gene77774	-0.803587	3.25E-49	-1.69E-46
MS.gene050082	MS.gene77774	0.836221	1.06E-56	-1.69E-46
MS.gene050170	MS.gene77774	-0.849232	3.69E-60	-1.69E-46
MS.gene050323	MS.gene77774	-0.813969	1.96E-51	-1.69E-46
MS.gene050326	MS.gene77774	0.821735	3.45E-53	-1.69E-46
MS.gene050328	MS.gene77774	0.822634	2.13E-53	-1.69E-46
MS.gene050338	MS.gene77774	0.861507	9.77E-64	-1.69E-46
MS.gene050496	MS.gene77774	-0.830439	2.93E-55	-1.69E-46
MS.gene050577	MS.gene77774	-0.816904	4.35E-52	-1.69E-46
MS.gene050904	MS.gene77774	-0.811654	6.28E-51	-1.69E-46
MS.gene051364	MS.gene77774	0.817722	2.85E-52	-1.69E-46
MS.gene051366	MS.gene77774	0.808104	3.65E-50	-1.69E-46
MS.gene051367	MS.gene77774	0.805372	1.38E-49	-1.69E-46
MS.gene051422	MS.gene77774	0.852693	3.91E-61	-1.69E-46
MS.gene051651	MS.gene77774	0.838653	2.53E-57	-1.69E-46
MS.gene052129	MS.gene77774	0.80057	1.35E-48	-1.69E-46
MS.gene052383	MS.gene77774	0.800199	1.61E-48	-1.69E-46
MS.gene052494	MS.gene77774	0.803421	3.52E-49	-1.69E-46
MS.gene052606	MS.gene77774	0.824106	9.66E-54	-1.69E-46
MS.gene052710	MS.gene77774	0.809007	2.34E-50	-1.69E-46
MS.gene053097	MS.gene77774	0.826577	2.51E-54	-1.69E-46
MS.gene054614	MS.gene77774	0.801025	1.09E-48	-1.69E-46
MS.gene054706	MS.gene77774	0.809642	1.71E-50	-1.69E-46
MS.gene05470	MS.gene77774	-0.820899	5.37E-53	-1.69E-46
MS.gene054884	MS.gene77774	0.809516	1.82E-50	-1.69E-46
MS.gene055158	MS.gene77774	0.832323	1.01E-55	-1.69E-46
MS.gene055251	MS.gene77774	0.850047	2.19E-60	-1.69E-46
MS.gene055729	MS.gene77774	0.829455	5.10E-55	-1.69E-46
MS.gene055730	MS.gene77774	0.832854	7.45E-56	-1.69E-46
MS.gene055731	MS.gene77774	0.817982	2.49E-52	-1.69E-46
MS.gene055748	MS.gene77774	-0.801119	1.05E-48	-1.69E-46
MS.gene055751	MS.gene77774	-0.809553	1.79E-50	-1.69E-46
MS.gene05589	MS.gene77774	-0.84857	5.64E-60	-1.69E-46
MS.gene056198	MS.gene77774	0.812805	3.52E-51	-1.69E-46
MS.gene056200	MS.gene77774	0.80475	1.86E-49	-1.69E-46
MS.gene056266	MS.gene77774	-0.815789	7.72E-52	-1.69E-46
MS.gene056354	MS.gene77774	0.814757	1.31E-51	-1.69E-46
MS.gene056387	MS.gene77774	-0.82783	1.26E-54	-1.69E-46
MS.gene056504	MS.gene77774	-0.831169	1.94E-55	-1.69E-46
MS.gene056692	MS.gene77774	-0.809322	2.00E-50	-1.69E-46
MS.gene056694	MS.gene77774	0.839182	1.85E-57	-1.69E-46
MS.gene056697	MS.gene77774	0.85413	1.51E-61	-1.69E-46
MS.gene056856	MS.gene77774	0.841502	4.57E-58	-1.69E-46
MS.gene057549	MS.gene77774	0.806256	8.98E-50	-1.69E-46
MS.gene058067	MS.gene77774	0.817788	2.75E-52	-1.69E-46
MS.gene058268	MS.gene77774	0.81724	3.65E-52	-1.69E-46
MS.gene058269	MS.gene77774	0.80716	5.79E-50	-1.69E-46
MS.gene058334	MS.gene77774	0.853905	1.75E-61	-1.69E-46
MS.gene058382	MS.gene77774	0.911447	6.02E-83	-1.69E-46
MS.gene058386	MS.gene77774	0.810951	8.93E-51	-1.69E-46
MS.gene058838	MS.gene77774	-0.823618	1.26E-53	-1.69E-46
MS.gene05926	MS.gene77774	0.862146	6.23E-64	-1.69E-46
MS.gene059685	MS.gene77774	0.807584	4.71E-50	-1.69E-46
MS.gene059703	MS.gene77774	0.802794	4.74E-49	-1.69E-46
MS.gene059865	MS.gene77774	-0.801881	7.30E-49	-1.69E-46
MS.gene06000	MS.gene77774	-0.816292	5.96E-52	-1.69E-46
MS.gene06027	MS.gene77774	-0.818892	1.55E-52	-1.69E-46
MS.gene060405	MS.gene77774	0.838381	2.98E-57	-1.69E-46
MS.gene06042	MS.gene77774	0.818937	1.51E-52	-1.69E-46
MS.gene060593	MS.gene77774	0.820462	6.77E-53	-1.69E-46
MS.gene060595	MS.gene77774	0.803205	3.90E-49	-1.69E-46
MS.gene060762	MS.gene77774	-0.802775	4.78E-49	-1.69E-46
MS.gene060823	MS.gene77774	0.833139	6.33E-56	-1.69E-46
MS.gene060982	MS.gene77774	-0.829624	4.64E-55	-1.69E-46
MS.gene061044	MS.gene77774	0.861368	1.08E-63	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene59857	MS.gene77774	PPI
MS.gene77774	MS.gene59859	PPI
MS.gene74364	MS.gene77774	PPI
MS.gene016327	MS.gene77774	PPI
MS.gene74352	MS.gene77774	PPI
MS.gene59849	MS.gene77774	PPI
MS.gene77774	MS.gene058383	PPI
MS.gene77774	MS.gene016307	PPI
MS.gene77774	MS.gene59840	PPI
MS.gene59862	MS.gene77774	PPI
MS.gene77774	MS.gene058386	PPI
MS.gene016336	MS.gene77774	PPI
MS.gene74344	MS.gene77774	PPI
MS.gene99548	MS.gene77774	PPI
MS.gene066940	MS.gene77774	PPI
MS.gene016326	MS.gene77774	PPI
MS.gene77769	MS.gene77774	PPI
MS.gene016337	MS.gene77774	PPI
MS.gene77774	MS.gene74341	PPI
MS.gene74353	MS.gene77774	PPI
MS.gene77771	MS.gene77774	PPI
MS.gene59869	MS.gene77774	PPI
MS.gene77774	MS.gene016315	PPI
MS.gene74354	MS.gene77774	PPI
MS.gene016314	MS.gene77774	PPI
MS.gene77774	MS.gene74358	PPI
MS.gene016330	MS.gene77774	PPI
MS.gene77758	MS.gene77774	PPI
MS.gene77774	MS.gene016317	PPI
MS.gene77774	MS.gene62988	PPI
MS.gene77774	MS.gene83129	PPI
MS.gene77774	MS.gene74346	PPI
MS.gene62988	MS.gene77774	PPI
MS.gene77774	MS.gene59140	PPI
MS.gene77761	MS.gene77774	PPI
MS.gene77774	MS.gene77781	PPI
MS.gene058382	MS.gene77774	PPI
MS.gene77774	MS.gene74367	PPI
MS.gene77780	MS.gene77774	PPI
MS.gene74365	MS.gene77774	PPI
MS.gene77774	MS.gene59847	PPI
MS.gene77768	MS.gene77774	PPI
MS.gene59863	MS.gene77774	PPI
MS.gene59841	MS.gene77774	PPI
MS.gene77770	MS.gene77774	PPI
MS.gene77774	MS.gene59860	PPI
MS.gene74342	MS.gene77774	PPI
MS.gene77774	MS.gene026605	PPI
MS.gene058384	MS.gene77774	PPI
MS.gene74355	MS.gene77774	PPI
MS.gene74343	MS.gene77774	PPI
MS.gene77763	MS.gene77774	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77774.t1	MTR_8g045490	92.308	156	12	0	1	156	1	156	1.59e-105	298
MS.gene77774.t1	MTR_8g045520	81.529	157	28	1	1	156	1	157	5.45e-93	266
MS.gene77774.t1	MTR_8g045400	78.344	157	32	2	1	156	1	156	3.09e-88	254
MS.gene77774.t1	MTR_8g045570	76.316	152	36	0	1	152	1	152	1.74e-86	250
MS.gene77774.t1	MTR_8g045695	74.510	153	38	1	1	153	1	152	1.02e-83	243
MS.gene77774.t1	MTR_8g045555	75.000	152	38	0	1	152	1	152	1.41e-83	242
MS.gene77774.t1	MTR_8g045300	69.872	156	46	1	1	155	1	156	1.18e-80	235
MS.gene77774.t1	MTR_8g045735	70.588	153	44	1	1	153	1	152	7.02e-80	233
MS.gene77774.t1	MTR_8g045665	70.588	153	44	1	1	153	1	152	4.93e-78	228
MS.gene77774.t1	MTR_8g045640	69.281	153	46	1	1	153	1	152	5.67e-76	223
MS.gene77774.t1	MTR_8g045560	67.974	153	48	1	1	153	1	152	1.12e-74	220
MS.gene77774.t1	MTR_1g030810	43.137	153	84	2	1	151	1	152	1.28e-40	134
MS.gene77774.t1	MTR_1g030820	40.523	153	88	2	1	151	1	152	2.93e-40	133
MS.gene77774.t1	MTR_1g030840	37.179	156	90	4	1	149	1	155	4.59e-29	104
MS.gene77774.t1	MTR_8g012550	35.616	146	91	3	6	150	8	151	1.57e-28	103
MS.gene77774.t1	MTR_1g031640	38.514	148	82	5	7	152	7	147	5.21e-26	96.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77774.t1	AT5G28010	36.242	149	92	3	3	149	15	162	7.03e-27	99.4
MS.gene77774.t1	AT5G28010	36.242	149	92	3	3	149	15	162	7.03e-27	99.4
MS.gene77774.t1	AT1G70890	37.584	149	90	3	3	149	7	154	2.70e-26	97.8
MS.gene77774.t1	AT1G70830	34.899	149	94	3	3	149	22	169	5.31e-24	92.0
MS.gene77774.t1	AT1G70830	34.899	149	94	3	3	149	22	169	9.91e-24	92.4
MS.gene77774.t1	AT1G70840	32.886	149	97	3	3	149	20	167	2.25e-23	90.5
MS.gene77774.t1	AT1G70830	34.899	149	94	3	3	149	22	169	3.49e-23	92.0
MS.gene77774.t1	AT5G28000	32.886	149	97	3	3	149	13	160	9.31e-23	88.6
MS.gene77774.t1	AT1G70830	34.899	149	94	3	3	149	22	169	9.60e-23	92.4
MS.gene77774.t1	AT1G70830	33.557	149	96	3	3	149	184	331	3.49e-21	88.2
MS.gene77774.t1	AT1G70870	35.948	153	81	4	1	151	1	138	8.43e-22	85.5
MS.gene77774.t1	AT1G70830	33.557	149	96	3	3	149	137	284	1.27e-21	88.6
MS.gene77774.t1	AT1G70830	30.435	92	63	1	59	149	31	122	6.30e-11	59.3
MS.gene77774.t1	AT1G70850	32.886	149	97	3	3	149	9	156	1.61e-21	87.4
MS.gene77774.t1	AT1G23120	30.769	143	94	3	7	149	7	144	4.28e-21	84.0
MS.gene77774.t1	AT1G70850	32.886	149	97	3	3	149	9	156	4.56e-21	87.4
MS.gene77774.t1	AT1G70850	33.094	139	90	3	13	149	175	312	8.77e-20	84.0
MS.gene77774.t1	AT1G70850	32.886	149	97	3	3	149	9	156	4.56e-21	87.4
MS.gene77774.t1	AT1G70850	33.094	139	90	3	13	149	175	312	8.77e-20	84.0
MS.gene77774.t1	AT4G23670	34.641	153	97	3	1	152	1	151	7.32e-21	83.6
MS.gene77774.t1	AT1G23130	30.405	148	101	2	3	149	10	156	1.18e-20	83.2
MS.gene77774.t1	AT1G23120	30.769	143	94	3	7	149	57	194	1.26e-20	84.0
MS.gene77774.t1	AT1G70880	30.872	149	100	3	3	149	8	155	5.15e-20	81.6
MS.gene77774.t1	AT2G01520	32.026	153	101	3	1	152	1	151	7.20e-19	78.2
MS.gene77774.t1	AT4G23680	32.026	153	101	3	1	152	1	151	2.83e-18	76.6
MS.gene77774.t1	AT1G14930	32.298	161	92	5	1	153	1	152	1.12e-17	75.5
MS.gene77774.t1	AT2G01530	32.026	153	101	3	1	152	1	151	2.20e-17	74.3
MS.gene77774.t1	AT4G14060	32.680	153	100	3	1	152	1	151	2.78e-17	74.3
MS.gene77774.t1	AT1G35260	28.966	145	99	3	7	149	6	148	3.64e-17	73.9
MS.gene77774.t1	AT1G24020	32.692	156	103	2	1	155	1	155	4.95e-16	71.2
MS.gene77774.t1	AT1G24020	32.692	156	103	2	1	155	1	155	4.95e-16	71.2
MS.gene77774.t1	AT1G30990	32.000	150	98	4	1	149	1	147	2.12e-15	69.3
MS.gene77774.t1	AT1G14940	30.000	150	102	3	1	149	1	148	3.65e-14	66.2
MS.gene77774.t1	AT3G26460	32.051	156	98	5	1	152	1	152	8.17e-14	65.1
MS.gene77774.t1	AT1G14950	28.947	152	105	3	1	151	1	150	1.34e-13	64.7
MS.gene77774.t1	AT1G35310	25.362	138	100	3	13	149	12	147	1.95e-12	61.6
MS.gene77774.t1	AT1G14960	28.571	154	107	3	1	153	1	152	8.27e-12	60.1
MS.gene77774.t1	AT3G26450	27.273	154	108	4	1	152	1	152	2.88e-11	58.5

Find 27 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGCACTGCTGCTGCTAAA+TGG	0.310932	8.1:+59984033	MS.gene77774:CDS
CACCCTTATCAATGACTTCA+AGG	0.380806	8.1:-59984010	None:intergenic
TTATAGAGCTATCTTTGCTT+TGG	0.392094	8.1:-59984153	None:intergenic
AAACACTGGACTTACGTCAT+AGG	0.436108	8.1:+59983093	MS.gene77774:CDS
TTCTAAGAAATGGTGCTCTC+TGG	0.436928	8.1:+59982919	None:intergenic
CATCCTTGAAGTCATTGATA+AGG	0.445764	8.1:+59984007	MS.gene77774:CDS
AAGTATTCCATGTAGCCATT+TGG	0.448595	8.1:-59984095	None:intergenic
AACACTTATAAGCTCTTTGG+TGG	0.457999	8.1:+59983951	MS.gene77774:CDS
AACTTCATGAAGGTGAAGAT+TGG	0.478377	8.1:+59983052	MS.gene77774:CDS
GGTAAGCTCAGTACTGAAGT+TGG	0.490802	8.1:+59982940	MS.gene77774:CDS
ATCCTTGAAGTCATTGATAA+GGG	0.494628	8.1:+59984008	MS.gene77774:CDS
AGATATTGATGAGCACTATA+AGG	0.500590	8.1:+59983974	MS.gene77774:CDS
GAACAGATTGTAGAACTTGT+CGG	0.501167	8.1:-59982977	None:intergenic
TATTCCATGTAGCCATTTGG+AGG	0.517921	8.1:-59984092	None:intergenic
AGATTGGCATCACACTGATT+CGG	0.519723	8.1:+59983068	MS.gene77774:CDS
AATGGCTACATGGAATACTT+TGG	0.525683	8.1:+59984098	MS.gene77774:CDS
TGACCCTCCAAATGGCTACA+TGG	0.526835	8.1:+59984088	MS.gene77774:CDS
GAGGATATTGACCCTCCAAA+TGG	0.540200	8.1:+59984080	MS.gene77774:CDS
TATGATGAACTCTTTCACAA+AGG	0.552779	8.1:-59983026	None:intergenic
GAAGTCATTGATAAGGGTGA+TGG	0.579318	8.1:+59984014	MS.gene77774:CDS
ATCATAATTCACAGATGGCA+AGG	0.582682	8.1:+59983878	MS.gene77774:intron
CATCATACAAAACTTCATGA+AGG	0.606616	8.1:+59983042	MS.gene77774:CDS
ACACTGATTCGGTTAAACAC+TGG	0.614381	8.1:+59983079	MS.gene77774:CDS
ATTCCATGTAGCCATTTGGA+GGG	0.625101	8.1:-59984091	None:intergenic
AGATTGTAGAACTTGTCGGC+GGG	0.646397	8.1:-59982973	None:intergenic
TGAATATGAAAAGATCAATG+AGG	0.667026	8.1:+59984061	MS.gene77774:CDS
CAGATTGTAGAACTTGTCGG+CGG	0.688816	8.1:-59982974	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGGAATAATAAATATTTATA+AGG	-	chr8.1:59983724-59983743	None:intergenic	10.0%
!!!	ATAGTTTATTTGTTAAAAAA+TGG	+	chr8.1:59983787-59983806	MS.gene77774:intron	10.0%
!!!	TAGTTTATTTGTTAAAAAAT+GGG	+	chr8.1:59983788-59983807	MS.gene77774:intron	10.0%
!!	AAAAAAAATCAACAATCATT+TGG	+	chr8.1:59983481-59983500	MS.gene77774:intron	15.0%
!!	AAAAAAATCAACAATCATTT+GGG	+	chr8.1:59983482-59983501	MS.gene77774:intron	15.0%
!!	AATTAAATAAGATGATGATT+TGG	-	chr8.1:59983155-59983174	None:intergenic	15.0%
!!	ACAAATAAAAATGAAAACTT+TGG	-	chr8.1:59983842-59983861	None:intergenic	15.0%
!!!	GTTGATTTTTTTTTGTCATA+AGG	-	chr8.1:59983474-59983493	None:intergenic	20.0%
!	AAAAACACTTATAAGCTCTT+TGG	+	chr8.1:59983948-59983967	MS.gene77774:CDS	25.0%
!	AACCACAGTTATTCTTTATA+TGG	-	chr8.1:59983699-59983718	None:intergenic	25.0%
!	AGATTATGAGATCTCAAAAA+TGG	+	chr8.1:59983578-59983597	MS.gene77774:intron	25.0%
!	ATAAGAAAGAAACAAGTACA+TGG	+	chr8.1:59983261-59983280	MS.gene77774:intron	25.0%
!	TGAATATGAAAAGATCAATG+AGG	+	chr8.1:59984061-59984080	MS.gene77774:CDS	25.0%
!	TTGGGAAGAAAAAAAAATCA+GGG	-	chr8.1:59983344-59983363	None:intergenic	25.0%
!	TTTGGGAAGAAAAAAAAATC+AGG	-	chr8.1:59983345-59983364	None:intergenic	25.0%
!!	CTATCTTGAAAATGGTTTTT+GGG	-	chr8.1:59983362-59983381	None:intergenic	25.0%
!!	TCTATCTTGAAAATGGTTTT+TGG	-	chr8.1:59983363-59983382	None:intergenic	25.0%
	AACATAGTCAAAAGTAGAAG+TGG	-	chr8.1:59983405-59983424	None:intergenic	30.0%
	AGATATTGATGAGCACTATA+AGG	+	chr8.1:59983974-59983993	MS.gene77774:CDS	30.0%
	AGCCATATAAAGAATAACTG+TGG	+	chr8.1:59983694-59983713	MS.gene77774:intron	30.0%
	ATCCTTGAAGTCATTGATAA+GGG	+	chr8.1:59984008-59984027	MS.gene77774:CDS	30.0%
	CATCATACAAAACTTCATGA+AGG	+	chr8.1:59983042-59983061	MS.gene77774:CDS	30.0%
	TACATTCTACAAACCAAACA+TGG	+	chr8.1:59983314-59983333	MS.gene77774:intron	30.0%
	TATGATGAACTCTTTCACAA+AGG	-	chr8.1:59983029-59983048	None:intergenic	30.0%
	TGGGAAGAAAAAAAAATCAG+GGG	-	chr8.1:59983343-59983362	None:intergenic	30.0%
	TTATAGAGCTATCTTTGCTT+TGG	-	chr8.1:59984156-59984175	None:intergenic	30.0%
!	TGAAGCATCTATCTTGAAAA+TGG	-	chr8.1:59983370-59983389	None:intergenic	30.0%
!	TTTTTGTCATAAGGTTCTCT+GGG	-	chr8.1:59983465-59983484	None:intergenic	30.0%
!!	CTACTTTTGACTATGTTGAA+CGG	+	chr8.1:59983408-59983427	MS.gene77774:intron	30.0%
!!	TACTTTTGACTATGTTGAAC+GGG	+	chr8.1:59983409-59983428	MS.gene77774:intron	30.0%
!!!	TTTTTTGTCATAAGGTTCTC+TGG	-	chr8.1:59983466-59983485	None:intergenic	30.0%
	AACACTTATAAGCTCTTTGG+TGG	+	chr8.1:59983951-59983970	MS.gene77774:CDS	35.0%
	AACTTCATGAAGGTGAAGAT+TGG	+	chr8.1:59983052-59983071	MS.gene77774:CDS	35.0%
	AAGTATTCCATGTAGCCATT+TGG	-	chr8.1:59984098-59984117	None:intergenic	35.0%
	AATGGCTACATGGAATACTT+TGG	+	chr8.1:59984098-59984117	MS.gene77774:CDS	35.0%
	ATAGTCAAAAGTAGAAGTGG+TGG	-	chr8.1:59983402-59983421	None:intergenic	35.0%
	ATCATAATTCACAGATGGCA+AGG	+	chr8.1:59983878-59983897	MS.gene77774:intron	35.0%
	ATCTGTGAATTATGATGGCA+CGG	-	chr8.1:59983874-59983893	None:intergenic	35.0%
	CATCCTTGAAGTCATTGATA+AGG	+	chr8.1:59984007-59984026	MS.gene77774:CDS	35.0%
	GAACAGATTGTAGAACTTGT+CGG	-	chr8.1:59982980-59982999	None:intergenic	35.0%
	TTGCCATCTGTGAATTATGA+TGG	-	chr8.1:59983879-59983898	None:intergenic	35.0%
!	TTTTGTCATAAGGTTCTCTG+GGG	-	chr8.1:59983464-59983483	None:intergenic	35.0%
!!	TGATGATTTGGTTATCGATC+AGG	-	chr8.1:59983143-59983162	None:intergenic	35.0%
	AAACACTGGACTTACGTCAT+AGG	+	chr8.1:59983093-59983112	MS.gene77774:CDS	40.0%
	AAATCAGGGGTAACCATGTT+TGG	-	chr8.1:59983330-59983349	None:intergenic	40.0%
	ATTCCATGTAGCCATTTGGA+GGG	-	chr8.1:59984094-59984113	None:intergenic	40.0%
	CACCCTTATCAATGACTTCA+AGG	-	chr8.1:59984013-59984032	None:intergenic	40.0%
	GAAGTCATTGATAAGGGTGA+TGG	+	chr8.1:59984014-59984033	MS.gene77774:CDS	40.0%
	GTGCCATCATAATTCACAGA+TGG	+	chr8.1:59983873-59983892	MS.gene77774:intron	40.0%
	TATTCCATGTAGCCATTTGG+AGG	-	chr8.1:59984095-59984114	None:intergenic	40.0%
	TCTGTGAATTATGATGGCAC+GGG	-	chr8.1:59983873-59983892	None:intergenic	40.0%
!	AGATTGGCATCACACTGATT+CGG	+	chr8.1:59983068-59983087	MS.gene77774:CDS	40.0%
!	ATAAGGTTCTCTGGGGAATA+TGG	-	chr8.1:59983457-59983476	None:intergenic	40.0%
!!	ACACTGATTCGGTTAAACAC+TGG	+	chr8.1:59983079-59983098	MS.gene77774:CDS	40.0%
	AGATTGTAGAACTTGTCGGC+GGG	-	chr8.1:59982976-59982995	None:intergenic	45.0%
	CAGATTGTAGAACTTGTCGG+CGG	-	chr8.1:59982977-59982996	None:intergenic	45.0%
	GAGGATATTGACCCTCCAAA+TGG	+	chr8.1:59984080-59984099	MS.gene77774:CDS	45.0%
!	GGTAAGCTCAGTACTGAAGT+TGG	+	chr8.1:59982940-59982959	MS.gene77774:CDS	45.0%
!!!	AATATTTTTGTATAAAAAAA+AGG	-	chr8.1:59983744-59983763	None:intergenic	5.0%
!!!	TTTTATACAAAAATATTTAT+TGG	+	chr8.1:59983747-59983766	MS.gene77774:intron	5.0%
	ATGGCACTGCTGCTGCTAAA+TGG	+	chr8.1:59984033-59984052	MS.gene77774:CDS	50.0%
	TGACCCTCCAAATGGCTACA+TGG	+	chr8.1:59984088-59984107	MS.gene77774:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	59982928	59984175	59982928	ID=MS.gene77774
chr8.1	mRNA	59982928	59984175	59982928	ID=MS.gene77774.t1;Parent=MS.gene77774
chr8.1	exon	59982928	59983114	59982928	ID=MS.gene77774.t1.exon1;Parent=MS.gene77774.t1
chr8.1	CDS	59982928	59983114	59982928	ID=cds.MS.gene77774.t1;Parent=MS.gene77774.t1
chr8.1	exon	59983892	59984175	59983892	ID=MS.gene77774.t1.exon2;Parent=MS.gene77774.t1
chr8.1	CDS	59983892	59984175	59983892	ID=cds.MS.gene77774.t1;Parent=MS.gene77774.t1

Gene Sequence

>MS.gene77774

ATGGTGCTCTCTGGTAAGCTCAGTACTGAAGTTGGAATCAAAACACCCGCCGACAAGTTCTACAATCTGTTCATAACAGAACTTCATGAAGTGCAAAACCTTTGTGAAAGAGTTCATCATACAAAACTTCATGAAGGTGAAGATTGGCATCACACTGATTCGGTTAAACACTGGACTTACGTCATAGGTAATTATGTTTCTAATTCAGTTCACCTGATCGATAACCAAATCATCATCTTATTTAATTTGAAATTTTTTTTATGTTTTATTTTTATTCTTAATGATAACTATACTTCTAATAACAAAAAAAAAAAATTGTGAATTAAAAGAAATATAAGAAAGAAACAAGTACATGGTTACTTATCAATACATGAATTACTTATCAATACATTCTACAAACCAAACATGGTTACCCCTGATTTTTTTTTCTTCCCAAAAACCATTTTCAAGATAGATGCTTCATCATTTCAACCACCACTTCTACTTTTGACTATGTTGAACGGGAAATATAATCATTCATAAGCTTCCATATTCCCCAGAGAACCTTATGACAAAAAAAAATCAACAATCATTTGGGTAACTCATCTCTTAAAGTTTTAAATACAATGTTAACAAATGTGTTCAATTTAATTTGTAAATTTTGTTAATATAGATTATGAGATCTCAAAAATGGTTAAATGAATAAAAAGTAATGAAAAGAAGTATATAAAAATCATGAATTATGTAAAAAAAAAAACAATTATGAATTATTTGAGAGATTAAAATCAGCCATATAAAGAATAACTGTGGTTTACCTTATAAATATTTATTATTCCTTTTTTTTATACAAAAATATTTATTGGTAAAATAAAACAATATAATAGTTTATTTGTTAAAAAATGGGTGATTGTATTTTTCTGTAGTTGCTATATCCAAAGTTTTCATTTTTATTTGTATTAATTTCCCGTGCCATCATAATTCACAGATGGCAAGGTACATACATGTCACGAGAGAGTTGAAGAAGTTGATGAACTGAATAAAAAAAACACTTATAAGCTCTTTGGTGGAGATATTGATGAGCACTATAAGGTCTTTAAGCTCATCCTTGAAGTCATTGATAAGGGTGATGGCACTGCTGCTGCTAAATGGACAGTTGAATATGAAAAGATCAATGAGGATATTGACCCTCCAAATGGCTACATGGAATACTTTGGCAAAATCACTAGAGATGTTGATGCTCATCTTGCCAAAGCAAAGATAGCTCTATAA

Protein sequence

>MS.gene77774.t1

MVLSGKLSTEVGIKTPADKFYNLFITELHEVQNLCERVHHTKLHEGEDWHHTDSVKHWTYVIDGKVHTCHERVEEVDELNKKNTYKLFGGDIDEHYKVFKLILEVIDKGDGTAAAKWTVEYEKINEDIDPPNGYMEYFGKITRDVDAHLAKAKIAL