Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76705.t1 | XP_003605293.2 | 95.2 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 5.50E-61 | 243.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76705.t1 | Q43019 | 56.3 | 126 | 49 | 4 | 1 | 124 | 1 | 122 | 1.5e-30 | 133.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76705.t1 | G7JIB4 | 95.2 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 4.0e-61 | 243.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene76705 | 0.85929 | 4.58E-63 | -1.69E-46 |
| MS.gene050298 | MS.gene76705 | 0.829243 | 5.74E-55 | -1.69E-46 |
| MS.gene050563 | MS.gene76705 | 0.860768 | 1.64E-63 | -1.69E-46 |
| MS.gene050584 | MS.gene76705 | 0.8776 | 5.52E-69 | -1.69E-46 |
| MS.gene050585 | MS.gene76705 | 0.874462 | 6.63E-68 | -1.69E-46 |
| MS.gene050586 | MS.gene76705 | 0.800235 | 1.58E-48 | -1.69E-46 |
| MS.gene050587 | MS.gene76705 | 0.878712 | 2.25E-69 | -1.69E-46 |
| MS.gene05143 | MS.gene76705 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene051626 | MS.gene76705 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene051789 | MS.gene76705 | 0.884097 | 2.56E-71 | -1.69E-46 |
| MS.gene052142 | MS.gene76705 | 0.879911 | 8.47E-70 | -1.69E-46 |
| MS.gene05236 | MS.gene76705 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene052698 | MS.gene76705 | 0.807375 | 5.21E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene76705 | 0.845113 | 4.97E-59 | -1.69E-46 |
| MS.gene053383 | MS.gene76705 | 0.872677 | 2.65E-67 | -1.69E-46 |
| MS.gene053563 | MS.gene76705 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene05456 | MS.gene76705 | 0.895165 | 1.24E-75 | -1.69E-46 |
| MS.gene054596 | MS.gene76705 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene055359 | MS.gene76705 | 0.846311 | 2.35E-59 | -1.69E-46 |
| MS.gene057022 | MS.gene76705 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene058918 | MS.gene76705 | 0.806499 | 7.99E-50 | -1.69E-46 |
| MS.gene059006 | MS.gene76705 | 0.885179 | 1.02E-71 | -1.69E-46 |
| MS.gene059768 | MS.gene76705 | 0.852131 | 5.64E-61 | -1.69E-46 |
| MS.gene060513 | MS.gene76705 | 0.807267 | 5.50E-50 | -1.69E-46 |
| MS.gene060691 | MS.gene76705 | 0.849785 | 2.59E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76705 | MS.gene82222 | PPI |
| MS.gene76705 | MS.gene53309 | PPI |
| MS.gene76713 | MS.gene76705 | PPI |
| MS.gene76705 | MS.gene76714 | PPI |
| MS.gene77025 | MS.gene76705 | PPI |
| MS.gene76705 | MS.gene48797 | PPI |
| MS.gene53312 | MS.gene76705 | PPI |
| MS.gene48828 | MS.gene76705 | PPI |
| MS.gene76705 | MS.gene82219 | PPI |
| MS.gene76705 | MS.gene76747 | PPI |
| MS.gene76705 | MS.gene82253 | PPI |
| MS.gene76705 | MS.gene76710 | PPI |
| MS.gene76705 | MS.gene77022 | PPI |
| MS.gene76705 | MS.gene82221 | PPI |
| MS.gene48831 | MS.gene76705 | PPI |
| MS.gene76705 | MS.gene82256 | PPI |
| MS.gene76705 | MS.gene48796 | PPI |
| MS.gene53311 | MS.gene76705 | PPI |
| MS.gene76705 | MS.gene48829 | PPI |
| MS.gene76705 | MS.gene76745 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76705.t1 | MTR_4g028180 | 95.238 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 8.20e-83 | 238 |
| MS.gene76705.t1 | MTR_7g073170 | 46.281 | 121 | 59 | 2 | 4 | 124 | 3 | 117 | 4.29e-33 | 112 |
| MS.gene76705.t1 | MTR_7g073150 | 45.000 | 120 | 61 | 2 | 4 | 123 | 3 | 117 | 1.22e-30 | 106 |
| MS.gene76705.t1 | MTR_4g428370 | 46.552 | 116 | 56 | 3 | 9 | 124 | 62 | 171 | 7.19e-29 | 103 |
| MS.gene76705.t1 | MTR_7g072930 | 43.089 | 123 | 64 | 3 | 4 | 125 | 3 | 120 | 8.02e-27 | 97.4 |
| MS.gene76705.t1 | MTR_4g028190 | 39.024 | 123 | 71 | 1 | 1 | 123 | 1 | 119 | 1.61e-26 | 95.9 |
| MS.gene76705.t1 | MTR_4g027800 | 41.880 | 117 | 62 | 3 | 9 | 125 | 5 | 115 | 3.00e-26 | 95.1 |
| MS.gene76705.t1 | MTR_4g027840 | 42.735 | 117 | 61 | 3 | 9 | 125 | 5 | 115 | 9.07e-26 | 94.7 |
| MS.gene76705.t1 | MTR_4g029350 | 41.803 | 122 | 64 | 3 | 4 | 125 | 2 | 116 | 2.01e-24 | 90.5 |
| MS.gene76705.t1 | MTR_2g062600 | 38.333 | 120 | 67 | 3 | 6 | 124 | 1 | 114 | 1.64e-23 | 88.2 |
| MS.gene76705.t1 | MTR_1g040335 | 44.715 | 123 | 61 | 3 | 4 | 125 | 3 | 119 | 2.09e-23 | 87.8 |
| MS.gene76705.t1 | MTR_7g072900 | 42.017 | 119 | 64 | 2 | 4 | 122 | 3 | 116 | 3.67e-23 | 87.4 |
| MS.gene76705.t1 | MTR_7g072830 | 38.211 | 123 | 70 | 3 | 4 | 125 | 3 | 120 | 6.02e-23 | 86.7 |
| MS.gene76705.t1 | MTR_4g029390 | 41.803 | 122 | 64 | 3 | 4 | 125 | 2 | 116 | 6.26e-23 | 86.7 |
| MS.gene76705.t1 | MTR_7g072993 | 43.443 | 122 | 62 | 3 | 4 | 123 | 3 | 119 | 1.47e-22 | 86.3 |
| MS.gene76705.t1 | MTR_7g073130 | 41.600 | 125 | 62 | 4 | 4 | 125 | 3 | 119 | 1.28e-21 | 83.6 |
| MS.gene76705.t1 | MTR_4g029210 | 38.938 | 113 | 63 | 3 | 9 | 121 | 5 | 111 | 1.38e-21 | 83.2 |
| MS.gene76705.t1 | MTR_7g072730 | 36.364 | 121 | 71 | 3 | 4 | 123 | 3 | 118 | 2.41e-21 | 84.0 |
| MS.gene76705.t1 | MTR_7g072960 | 39.516 | 124 | 53 | 3 | 6 | 125 | 1 | 106 | 7.21e-20 | 79.3 |
| MS.gene76705.t1 | MTR_7g073060 | 36.066 | 122 | 73 | 2 | 4 | 125 | 3 | 119 | 7.38e-20 | 79.0 |
| MS.gene76705.t1 | MTR_7g072980 | 36.667 | 120 | 70 | 3 | 4 | 122 | 3 | 117 | 2.54e-19 | 78.2 |
| MS.gene76705.t1 | MTR_7g073120 | 37.600 | 125 | 70 | 4 | 1 | 123 | 1 | 119 | 2.93e-19 | 78.2 |
| MS.gene76705.t1 | MTR_7g073100 | 36.667 | 120 | 71 | 2 | 4 | 123 | 3 | 117 | 6.16e-19 | 77.4 |
| MS.gene76705.t1 | MTR_7g072810 | 39.669 | 121 | 61 | 4 | 4 | 123 | 3 | 112 | 1.76e-18 | 75.5 |
| MS.gene76705.t1 | MTR_7g072760 | 37.097 | 124 | 72 | 3 | 4 | 125 | 3 | 122 | 7.24e-17 | 71.2 |
| MS.gene76705.t1 | MTR_7g073030 | 35.833 | 120 | 72 | 2 | 4 | 123 | 3 | 117 | 3.31e-16 | 70.5 |
| MS.gene76705.t1 | MTR_7g451500 | 29.787 | 94 | 62 | 1 | 31 | 124 | 9 | 98 | 4.13e-15 | 66.2 |
| MS.gene76705.t1 | MTR_3g467100 | 32.000 | 125 | 72 | 5 | 1 | 124 | 1 | 113 | 3.13e-14 | 64.3 |
| MS.gene76705.t1 | MTR_1g040330 | 38.211 | 123 | 69 | 3 | 4 | 125 | 3 | 119 | 7.30e-14 | 63.5 |
| MS.gene76705.t1 | MTR_3g056640 | 31.624 | 117 | 74 | 2 | 10 | 125 | 11 | 122 | 3.74e-13 | 61.6 |
| MS.gene76705.t1 | MTR_3g046515 | 28.455 | 123 | 82 | 2 | 2 | 123 | 3 | 120 | 3.78e-13 | 61.6 |
| MS.gene76705.t1 | MTR_3g046530 | 28.000 | 125 | 84 | 2 | 2 | 125 | 3 | 122 | 6.89e-13 | 60.8 |
| MS.gene76705.t1 | MTR_3g046540 | 28.000 | 125 | 84 | 2 | 2 | 125 | 3 | 122 | 8.10e-13 | 60.8 |
| MS.gene76705.t1 | MTR_4g028250 | 32.773 | 119 | 73 | 4 | 9 | 125 | 5 | 118 | 6.07e-11 | 55.8 |
| MS.gene76705.t1 | MTR_3g464130 | 33.333 | 93 | 56 | 2 | 31 | 122 | 19 | 106 | 7.09e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76705.t1 | AT2G15050 | 50.833 | 120 | 53 | 3 | 9 | 125 | 6 | 122 | 8.10e-33 | 112 |
| MS.gene76705.t1 | AT2G15050 | 50.847 | 118 | 52 | 3 | 9 | 123 | 6 | 120 | 7.32e-32 | 109 |
| MS.gene76705.t1 | AT2G15050 | 51.351 | 111 | 48 | 3 | 9 | 116 | 6 | 113 | 5.75e-30 | 104 |
| MS.gene76705.t1 | AT2G38540 | 43.590 | 117 | 62 | 2 | 9 | 125 | 6 | 118 | 1.34e-29 | 103 |
| MS.gene76705.t1 | AT5G01870 | 44.348 | 115 | 58 | 4 | 11 | 125 | 8 | 116 | 1.12e-28 | 101 |
| MS.gene76705.t1 | AT3G08770 | 48.515 | 101 | 48 | 3 | 25 | 125 | 17 | 113 | 3.27e-27 | 97.4 |
| MS.gene76705.t1 | AT3G08770 | 49.495 | 99 | 46 | 3 | 25 | 123 | 17 | 111 | 1.21e-26 | 96.3 |
| MS.gene76705.t1 | AT5G59320 | 46.847 | 111 | 53 | 3 | 15 | 125 | 11 | 115 | 6.14e-26 | 94.4 |
| MS.gene76705.t1 | AT5G59310 | 46.364 | 110 | 47 | 4 | 16 | 125 | 15 | 112 | 4.62e-25 | 92.0 |
| MS.gene76705.t1 | AT2G38530 | 42.735 | 117 | 63 | 2 | 9 | 125 | 6 | 118 | 5.47e-24 | 89.4 |
| MS.gene76705.t1 | AT3G51600 | 42.735 | 117 | 63 | 2 | 9 | 125 | 6 | 118 | 6.66e-23 | 86.7 |
| MS.gene76705.t1 | AT3G51590 | 39.316 | 117 | 65 | 3 | 9 | 125 | 6 | 116 | 1.56e-22 | 85.9 |
| MS.gene76705.t1 | AT2G18370 | 35.897 | 117 | 68 | 2 | 10 | 124 | 4 | 115 | 1.87e-20 | 80.5 |
| MS.gene76705.t1 | AT4G33355 | 35.246 | 122 | 72 | 3 | 4 | 125 | 5 | 119 | 1.23e-16 | 70.5 |
| MS.gene76705.t1 | AT4G33355 | 35.294 | 119 | 70 | 3 | 4 | 122 | 5 | 116 | 1.42e-15 | 67.8 |
Find 32 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTGAGCCATAGTATTA+AGG | 0.282339 | 4.1:-71291046 | None:intergenic |
| ATTGTGTTTCTTGTAACTTT+TGG | 0.294759 | 4.1:+71290900 | MS.gene76705:CDS |
| GGCAACTAGGCTTGTTTGTT+TGG | 0.295657 | 4.1:+71290875 | MS.gene76705:CDS |
| TACCTGTTACAGTCTGTATT+AGG | 0.301828 | 4.1:-71291206 | None:intergenic |
| ACCTGTTACAGTCTGTATTA+GGG | 0.370690 | 4.1:-71291205 | None:intergenic |
| GCCCTAATACAGACTGTAAC+AGG | 0.371378 | 4.1:+71291204 | MS.gene76705:CDS |
| GAAGACCAGCAGCAAGGTTA+AGG | 0.386841 | 4.1:-71291145 | None:intergenic |
| CATCATGGGTTACTCAACTA+TGG | 0.397979 | 4.1:+71290854 | None:intergenic |
| GTAACAGCTGCTTCAGCCTT+AGG | 0.410392 | 4.1:-71290924 | None:intergenic |
| AGTAAGGAACCTTAATACTA+TGG | 0.425103 | 4.1:+71291037 | MS.gene76705:CDS |
| AACAGCTCTACGATCATTTG+TGG | 0.431202 | 4.1:-71291066 | None:intergenic |
| AGTCTGTATTAGGGCTGATC+TGG | 0.446804 | 4.1:-71291196 | None:intergenic |
| TGTGTTTCTTACATTATGAC+TGG | 0.454062 | 4.1:+71290981 | MS.gene76705:CDS |
| CACAGTGTTGTAATGGAGTA+AGG | 0.461553 | 4.1:+71291021 | MS.gene76705:CDS |
| TTAAACCTTAACCTTGCTGC+TGG | 0.479414 | 4.1:+71291140 | MS.gene76705:CDS |
| GTTAACAGCATTCTTAATGC+AGG | 0.496302 | 4.1:-71291093 | None:intergenic |
| AAGAATGCTGTTAACCAAAG+TGG | 0.504107 | 4.1:+71291101 | MS.gene76705:CDS |
| GTATTAGGGCTGATCTGGTA+AGG | 0.522276 | 4.1:-71291191 | None:intergenic |
| ATGTTAACACCACATTTCCT+TGG | 0.522311 | 4.1:-71291167 | None:intergenic |
| GTTCCTGCACAGTGTTGTAA+TGG | 0.544737 | 4.1:+71291014 | MS.gene76705:CDS |
| ACCTTGCTGCTGGTCTTCCA+AGG | 0.551966 | 4.1:+71291150 | MS.gene76705:CDS |
| TAGTGTAACTGAAACCACTT+TGG | 0.564886 | 4.1:-71291115 | None:intergenic |
| GTTACTCAACTATGGCAACT+AGG | 0.565651 | 4.1:+71290862 | MS.gene76705:CDS |
| GTTTCTTACATTATGACTGG+TGG | 0.583866 | 4.1:+71290984 | MS.gene76705:CDS |
| GCTGGTCTTCCAAGGAAATG+TGG | 0.584199 | 4.1:+71291158 | MS.gene76705:CDS |
| TTTCTTACATTATGACTGGT+GGG | 0.587974 | 4.1:+71290985 | MS.gene76705:CDS |
| ACTCCATTACAACACTGTGC+AGG | 0.590449 | 4.1:-71291017 | None:intergenic |
| GCTTGTCACAACTTGACCAC+AGG | 0.613475 | 4.1:-71290949 | None:intergenic |
| TCCTTGGAAGACCAGCAGCA+AGG | 0.622205 | 4.1:-71291151 | None:intergenic |
| GAAGCAGCTGTTACATCCTG+TGG | 0.634952 | 4.1:+71290933 | MS.gene76705:CDS |
| GTCATAATGTAAGAAACACA+AGG | 0.653065 | 4.1:-71290978 | None:intergenic |
| TCATAATGTAAGAAACACAA+GGG | 0.708823 | 4.1:-71290977 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATAAAGTTTGTTACA+TGG | - | chr4.1:71291553-71291572 | None:intergenic | 15.0% |
| !!! | GTAACAAACTTTATTTTTTA+TGG | + | chr4.1:71291554-71291573 | MS.gene76705:intron | 15.0% |
| !! | AGAAAATACATATATACTTG+AGG | - | chr4.1:71291283-71291302 | None:intergenic | 20.0% |
| !! | GAAAATACATATATACTTGA+GGG | - | chr4.1:71291282-71291301 | None:intergenic | 20.0% |
| ! | TCATAATGTAAGAAACACAA+GGG | - | chr4.1:71290980-71290999 | None:intergenic | 25.0% |
| !! | ATTGTGTTTCTTGTAACTTT+TGG | + | chr4.1:71290900-71290919 | MS.gene76705:CDS | 25.0% |
| AGTAAGGAACCTTAATACTA+TGG | + | chr4.1:71291037-71291056 | MS.gene76705:CDS | 30.0% | |
| GTCATAATGTAAGAAACACA+AGG | - | chr4.1:71290981-71291000 | None:intergenic | 30.0% | |
| TAATCTTGTCACACTTAGTA+TGG | - | chr4.1:71291484-71291503 | None:intergenic | 30.0% | |
| TATCATGTATGATCGAGATT+GGG | + | chr4.1:71291393-71291412 | MS.gene76705:intron | 30.0% | |
| TGTGTTTCTTACATTATGAC+TGG | + | chr4.1:71290981-71291000 | MS.gene76705:CDS | 30.0% | |
| TTTCTTACATTATGACTGGT+GGG | + | chr4.1:71290985-71291004 | MS.gene76705:CDS | 30.0% | |
| AAGAATGCTGTTAACCAAAG+TGG | + | chr4.1:71291101-71291120 | MS.gene76705:CDS | 35.0% | |
| AAGACTCGTCAGACATATAT+AGG | - | chr4.1:71291589-71291608 | None:intergenic | 35.0% | |
| ACCTGTTACAGTCTGTATTA+GGG | - | chr4.1:71291208-71291227 | None:intergenic | 35.0% | |
| AGTGTGACAAGATTAAAGTG+TGG | + | chr4.1:71291489-71291508 | MS.gene76705:intron | 35.0% | |
| ATGTTAACACCACATTTCCT+TGG | - | chr4.1:71291170-71291189 | None:intergenic | 35.0% | |
| GTATCATGTATGATCGAGAT+TGG | + | chr4.1:71291392-71291411 | MS.gene76705:intron | 35.0% | |
| GTGTGACAAGATTAAAGTGT+GGG | + | chr4.1:71291490-71291509 | MS.gene76705:intron | 35.0% | |
| GTTAACAGCATTCTTAATGC+AGG | - | chr4.1:71291096-71291115 | None:intergenic | 35.0% | |
| GTTTCTTACATTATGACTGG+TGG | + | chr4.1:71290984-71291003 | MS.gene76705:CDS | 35.0% | |
| TACCTGTTACAGTCTGTATT+AGG | - | chr4.1:71291209-71291228 | None:intergenic | 35.0% | |
| TAGTGTAACTGAAACCACTT+TGG | - | chr4.1:71291118-71291137 | None:intergenic | 35.0% | |
| TGGTTTGAGCCATAGTATTA+AGG | - | chr4.1:71291049-71291068 | None:intergenic | 35.0% | |
| ! | TCTTGTAACTTTTGGTCCTA+AGG | + | chr4.1:71290908-71290927 | MS.gene76705:CDS | 35.0% |
| AACAGCTCTACGATCATTTG+TGG | - | chr4.1:71291069-71291088 | None:intergenic | 40.0% | |
| GATACGATCGAGAATGAGTT+GGG | - | chr4.1:71291377-71291396 | None:intergenic | 40.0% | |
| GTTACTCAACTATGGCAACT+AGG | + | chr4.1:71290862-71290881 | MS.gene76705:CDS | 40.0% | |
| TGATACGATCGAGAATGAGT+TGG | - | chr4.1:71291378-71291397 | None:intergenic | 40.0% | |
| TTAAACCTTAACCTTGCTGC+TGG | + | chr4.1:71291140-71291159 | MS.gene76705:CDS | 40.0% | |
| ! | CACAGTGTTGTAATGGAGTA+AGG | + | chr4.1:71291021-71291040 | MS.gene76705:CDS | 40.0% |
| ACTCCATTACAACACTGTGC+AGG | - | chr4.1:71291020-71291039 | None:intergenic | 45.0% | |
| AGTCTGTATTAGGGCTGATC+TGG | - | chr4.1:71291199-71291218 | None:intergenic | 45.0% | |
| GCCCTAATACAGACTGTAAC+AGG | + | chr4.1:71291204-71291223 | MS.gene76705:CDS | 45.0% | |
| GTATTAGGGCTGATCTGGTA+AGG | - | chr4.1:71291194-71291213 | None:intergenic | 45.0% | |
| GTTCCTGCACAGTGTTGTAA+TGG | + | chr4.1:71291014-71291033 | MS.gene76705:CDS | 45.0% | |
| TCATATGTAGCCCTGCAGAT+CGG | + | chr4.1:71291351-71291370 | MS.gene76705:intron | 45.0% | |
| ! | GGCAACTAGGCTTGTTTGTT+TGG | + | chr4.1:71290875-71290894 | MS.gene76705:CDS | 45.0% |
| GAAGACCAGCAGCAAGGTTA+AGG | - | chr4.1:71291148-71291167 | None:intergenic | 50.0% | |
| GAAGCAGCTGTTACATCCTG+TGG | + | chr4.1:71290933-71290952 | MS.gene76705:CDS | 50.0% | |
| GCTTGTCACAACTTGACCAC+AGG | - | chr4.1:71290952-71290971 | None:intergenic | 50.0% | |
| GTAACAGCTGCTTCAGCCTT+AGG | - | chr4.1:71290927-71290946 | None:intergenic | 50.0% | |
| !! | GCTGGTCTTCCAAGGAAATG+TGG | + | chr4.1:71291158-71291177 | MS.gene76705:CDS | 50.0% |
| TCCTTGGAAGACCAGCAGCA+AGG | - | chr4.1:71291154-71291173 | None:intergenic | 55.0% | |
| ! | AATGAGTTGGGCCGATCTGC+AGG | - | chr4.1:71291365-71291384 | None:intergenic | 55.0% |
| ! | ATGAGTTGGGCCGATCTGCA+GGG | - | chr4.1:71291364-71291383 | None:intergenic | 55.0% |
| !! | ACCTTGCTGCTGGTCTTCCA+AGG | + | chr4.1:71291150-71291169 | MS.gene76705:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 71290858 | 71291638 | 71290858 | ID=MS.gene76705 |
| chr4.1 | mRNA | 71290858 | 71291638 | 71290858 | ID=MS.gene76705.t1;Parent=MS.gene76705 |
| chr4.1 | exon | 71290858 | 71291225 | 71290858 | ID=MS.gene76705.t1.exon1;Parent=MS.gene76705.t1 |
| chr4.1 | CDS | 71290858 | 71291225 | 71290858 | ID=cds.MS.gene76705.t1;Parent=MS.gene76705.t1 |
| chr4.1 | exon | 71291629 | 71291638 | 71291629 | ID=MS.gene76705.t1.exon2;Parent=MS.gene76705.t1 |
| chr4.1 | CDS | 71291629 | 71291638 | 71291629 | ID=cds.MS.gene76705.t1;Parent=MS.gene76705.t1 |
| Gene Sequence |
| Protein sequence |
