Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070956.t1 | XP_013469759.1 | 88.9 | 398 | 42 | 1 | 1 | 398 | 1 | 396 | 7.80E-202 | 713 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070956.t1 | A0A072VPR0 | 88.9 | 398 | 42 | 1 | 1 | 398 | 1 | 396 | 5.6e-202 | 713.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene070956 | 0.859196 | 4.89E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene070956 | 0.835033 | 2.12E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene070956 | 0.858472 | 8.05E-63 | -1.69E-46 |
| MS.gene049369 | MS.gene070956 | 0.826376 | 2.81E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene070956 | 0.818217 | 2.20E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene070956 | 0.813391 | 2.62E-51 | -1.69E-46 |
| MS.gene049488 | MS.gene070956 | 0.830484 | 2.86E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene070956 | 0.864281 | 1.36E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene070956 | 0.853701 | 2.01E-61 | -1.69E-46 |
| MS.gene050122 | MS.gene070956 | 0.811698 | 6.15E-51 | -1.69E-46 |
| MS.gene050315 | MS.gene070956 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene070956 | -0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene070956 | 0.854601 | 1.10E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene070956 | 0.85901 | 5.56E-63 | -1.69E-46 |
| MS.gene050625 | MS.gene070956 | 0.833507 | 5.12E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene070956 | 0.901352 | 2.92E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene070956 | 0.895424 | 9.72E-76 | -1.69E-46 |
| MS.gene050772 | MS.gene070956 | 0.84327 | 1.55E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene070956 | 0.834584 | 2.75E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene070956 | 0.828408 | 9.14E-55 | -1.69E-46 |
| MS.gene05081 | MS.gene070956 | 0.843143 | 1.68E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene070956 | 0.885369 | 8.63E-72 | -1.69E-46 |
| MS.gene05105 | MS.gene070956 | 0.889987 | 1.48E-73 | -1.69E-46 |
| MS.gene051360 | MS.gene070956 | 0.824127 | 9.55E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene070956 | 0.878812 | 2.07E-69 | -1.69E-46 |
| MS.gene051438 | MS.gene070956 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene070956 | 0.865572 | 5.36E-65 | -1.69E-46 |
| MS.gene051582 | MS.gene070956 | 0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene070956 | 0.837488 | 5.05E-57 | -1.69E-46 |
| MS.gene051605 | MS.gene070956 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene070956 | 0.858659 | 7.08E-63 | -1.69E-46 |
| MS.gene051734 | MS.gene070956 | 0.829018 | 6.51E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene070956 | 0.876718 | 1.12E-68 | -1.69E-46 |
| MS.gene051941 | MS.gene070956 | 0.814319 | 1.64E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene070956 | -0.823475 | 1.36E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene070956 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene070956 | 0.825207 | 5.31E-54 | -1.69E-46 |
| MS.gene052136 | MS.gene070956 | 0.820155 | 7.97E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene070956 | 0.818971 | 1.48E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene070956 | 0.849004 | 4.27E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene070956 | 0.841082 | 5.90E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene070956 | 0.8105 | 1.12E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene070956 | 0.81423 | 1.71E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene070956 | 0.872853 | 2.31E-67 | -1.69E-46 |
| MS.gene052414 | MS.gene070956 | 0.909737 | 4.09E-82 | -1.69E-46 |
| MS.gene052421 | MS.gene070956 | 0.866072 | 3.73E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene070956 | 0.872256 | 3.66E-67 | -1.69E-46 |
| MS.gene052484 | MS.gene070956 | 0.844944 | 5.52E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene070956 | 0.861079 | 1.32E-63 | -1.69E-46 |
| MS.gene052501 | MS.gene070956 | 0.886874 | 2.34E-72 | -1.69E-46 |
| MS.gene052503 | MS.gene070956 | 0.845486 | 3.94E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene070956 | 0.884965 | 1.22E-71 | -1.69E-46 |
| MS.gene052615 | MS.gene070956 | 0.848231 | 6.99E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene070956 | 0.839301 | 1.72E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene070956 | 0.842952 | 1.89E-58 | -1.69E-46 |
| MS.gene052982 | MS.gene070956 | 0.893844 | 4.30E-75 | -1.69E-46 |
| MS.gene053103 | MS.gene070956 | 0.801528 | 8.63E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene070956 | 0.841953 | 3.47E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene070956 | 0.800929 | 1.14E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene070956 | 0.837559 | 4.84E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene070956 | 0.815623 | 8.41E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene070956 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene070956 | 0.823915 | 1.07E-53 | -1.69E-46 |
| MS.gene05335 | MS.gene070956 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene070956 | 0.849752 | 2.64E-60 | -1.69E-46 |
| MS.gene053449 | MS.gene070956 | 0.820284 | 7.44E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene070956 | 0.867184 | 1.65E-65 | -1.69E-46 |
| MS.gene053579 | MS.gene070956 | 0.826313 | 2.90E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene070956 | 0.852229 | 5.29E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene070956 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene070956 | 0.822937 | 1.81E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene070956 | 0.82555 | 4.41E-54 | -1.69E-46 |
| MS.gene053873 | MS.gene070956 | 0.838559 | 2.68E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene070956 | 0.841095 | 5.85E-58 | -1.69E-46 |
| MS.gene054102 | MS.gene070956 | 0.811823 | 5.77E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene070956 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene070956 | 0.808983 | 2.37E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene070956 | 0.852133 | 5.64E-61 | -1.69E-46 |
| MS.gene054556 | MS.gene070956 | 0.833189 | 6.15E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene070956 | 0.808865 | 2.51E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene070956 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene070956 | 0.831179 | 1.93E-55 | -1.69E-46 |
| MS.gene054884 | MS.gene070956 | -0.803562 | 3.28E-49 | -1.69E-46 |
| MS.gene054920 | MS.gene070956 | 0.834041 | 3.77E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene070956 | 0.87114 | 8.57E-67 | -1.69E-46 |
| MS.gene05494 | MS.gene070956 | 0.82166 | 3.59E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene070956 | 0.849227 | 3.70E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene070956 | 0.855624 | 5.57E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene070956 | 0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene070956 | 0.836198 | 1.08E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene070956 | 0.831645 | 1.48E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene070956 | 0.863107 | 3.15E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene070956 | 0.81776 | 2.79E-52 | -1.69E-46 |
| MS.gene055486 | MS.gene070956 | 0.841904 | 3.58E-58 | -1.69E-46 |
| MS.gene055539 | MS.gene070956 | 0.885786 | 6.02E-72 | -1.69E-46 |
| MS.gene05553 | MS.gene070956 | 0.818339 | 2.06E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene070956 | 0.821328 | 4.28E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene070956 | 0.813783 | 2.15E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene070956 | 0.890175 | 1.25E-73 | -1.69E-46 |
| MS.gene055744 | MS.gene070956 | 0.891532 | 3.65E-74 | -1.69E-46 |
| MS.gene055909 | MS.gene070956 | 0.863253 | 2.84E-64 | -1.69E-46 |
| MS.gene055911 | MS.gene070956 | 0.869526 | 2.90E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene070956 | 0.81649 | 5.38E-52 | -1.69E-46 |
| MS.gene05594 | MS.gene070956 | 0.816687 | 4.86E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene070956 | 0.846924 | 1.60E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene070956 | 0.890154 | 1.27E-73 | -1.69E-46 |
| MS.gene056407 | MS.gene070956 | 0.834598 | 2.73E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene070956 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene070956 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene070956 | 0.877835 | 4.57E-69 | -1.69E-46 |
| MS.gene056514 | MS.gene070956 | 0.851226 | 1.02E-60 | -1.69E-46 |
| MS.gene05664 | MS.gene070956 | 0.847355 | 1.22E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene070956 | 0.838661 | 2.52E-57 | -1.69E-46 |
| MS.gene05666 | MS.gene070956 | 0.839497 | 1.53E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene070956 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene070956 | 0.841639 | 4.21E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene070956 | 0.804619 | 1.98E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene070956 | 0.838575 | 2.65E-57 | -1.69E-46 |
| MS.gene057048 | MS.gene070956 | 0.819777 | 9.72E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene070956 | 0.852566 | 4.24E-61 | -1.69E-46 |
| MS.gene057124 | MS.gene070956 | 0.877155 | 7.88E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene070956 | 0.816149 | 6.42E-52 | -1.69E-46 |
| MS.gene057289 | MS.gene070956 | 0.806831 | 6.80E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene070956 | 0.806676 | 7.33E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene070956 | 0.807411 | 5.12E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene070956 | 0.832661 | 8.32E-56 | -1.69E-46 |
| MS.gene057476 | MS.gene070956 | 0.812548 | 4.01E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene070956 | 0.826211 | 3.07E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene070956 | 0.868381 | 6.81E-66 | -1.69E-46 |
| MS.gene057749 | MS.gene070956 | 0.855302 | 6.91E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene070956 | 0.865569 | 5.37E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene070956 | 0.836398 | 9.58E-57 | -1.69E-46 |
| MS.gene057831 | MS.gene070956 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene070956 | 0.820116 | 8.13E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene070956 | 0.815091 | 1.10E-51 | -1.69E-46 |
| MS.gene057888 | MS.gene070956 | 0.810403 | 1.17E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene070956 | 0.868015 | 8.93E-66 | -1.69E-46 |
| MS.gene058019 | MS.gene070956 | 0.846222 | 2.49E-59 | -1.69E-46 |
| MS.gene058090 | MS.gene070956 | 0.851723 | 7.37E-61 | -1.69E-46 |
| MS.gene058120 | MS.gene070956 | 0.874166 | 8.35E-68 | -1.69E-46 |
| MS.gene058130 | MS.gene070956 | 0.848658 | 5.33E-60 | -1.69E-46 |
| MS.gene058338 | MS.gene070956 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene070956 | 0.883336 | 4.89E-71 | -1.69E-46 |
| MS.gene05837 | MS.gene070956 | 0.838014 | 3.70E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene070956 | 0.873671 | 1.23E-67 | -1.69E-46 |
| MS.gene058544 | MS.gene070956 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene070956 | 0.895463 | 9.36E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene070956 | 0.846926 | 1.60E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene070956 | 0.813419 | 2.58E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene070956 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene070956 | 0.89435 | 2.68E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene070956 | 0.823418 | 1.40E-53 | -1.69E-46 |
| MS.gene059082 | MS.gene070956 | 0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene059141 | MS.gene070956 | 0.842938 | 1.90E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene070956 | 0.834162 | 3.51E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene070956 | 0.827303 | 1.69E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene070956 | 0.809059 | 2.28E-50 | -1.69E-46 |
| MS.gene059368 | MS.gene070956 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene070956 | 0.871812 | 5.14E-67 | -1.69E-46 |
| MS.gene059455 | MS.gene070956 | 0.839706 | 1.35E-57 | -1.69E-46 |
| MS.gene059462 | MS.gene070956 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene070956 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene070956 | 0.847976 | 8.22E-60 | -1.69E-46 |
| MS.gene059674 | MS.gene070956 | 0.807607 | 4.66E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene070956 | 0.859673 | 3.52E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene070956 | 0.830191 | 3.37E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene070956 | 0.836424 | 9.43E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene070956 | 0.804851 | 1.77E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene070956 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene070956 | 0.810915 | 9.09E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene070956 | 0.807429 | 5.08E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene070956 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene070956 | 0.844569 | 6.97E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene070956 | 0.864871 | 8.90E-65 | -1.69E-46 |
| MS.gene060485 | MS.gene070956 | 0.819499 | 1.12E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene070956 | 0.831123 | 2.00E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene070956 | 0.867681 | 1.14E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene070956 | 0.867772 | 1.07E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene070956 | 0.85382 | 1.86E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene070956 | 0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene070956 | 0.811578 | 6.53E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene070956 | 0.853252 | 2.70E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070956.t1 | MTR_1g102880 | 88.945 | 398 | 42 | 1 | 1 | 398 | 1 | 396 | 0.0 | 728 |
| MS.gene070956.t1 | MTR_1g102880 | 89.937 | 318 | 32 | 0 | 1 | 318 | 1 | 318 | 0.0 | 600 |
| MS.gene070956.t1 | MTR_1g102880 | 88.065 | 310 | 35 | 1 | 89 | 398 | 1 | 308 | 0.0 | 561 |
| MS.gene070956.t1 | MTR_1g102880 | 89.130 | 230 | 25 | 0 | 89 | 318 | 1 | 230 | 3.00e-153 | 433 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070956.t1 | AT4G38225 | 56.098 | 287 | 124 | 1 | 105 | 391 | 74 | 358 | 3.43e-116 | 343 |
| MS.gene070956.t1 | AT4G38225 | 56.098 | 287 | 124 | 1 | 105 | 391 | 74 | 358 | 4.30e-116 | 343 |
| MS.gene070956.t1 | AT4G38225 | 61.244 | 209 | 81 | 0 | 105 | 313 | 74 | 282 | 6.18e-92 | 279 |
Find 95 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGCTTCAGATATTTC+TGG | 0.172915 | 1.4:-79563546 | MS.gene070956:CDS |
| ATTTGGGGCTTTCCTATTAC+TGG | 0.197579 | 1.4:-79565301 | MS.gene070956:CDS |
| CTTCAGATATTTCTGGTATC+TGG | 0.246622 | 1.4:-79563539 | MS.gene070956:CDS |
| CAGAGTTCACTGCAGCAAAA+AGG | 0.289325 | 1.4:-79565327 | MS.gene070956:CDS |
| TGCTTCCTTTGCATCTTGAT+TGG | 0.292870 | 1.4:+79564716 | None:intergenic |
| CTCCTCCAATTGAAAGAAAA+TGG | 0.315285 | 1.4:+79565270 | None:intergenic |
| CCATTCACCTGATATTCTTC+TGG | 0.324871 | 1.4:+79564091 | None:intergenic |
| TCCCATTCTCGGTATGCTTC+AGG | 0.340067 | 1.4:+79564005 | None:intergenic |
| AAGGAAGCAGTGAAAGAAAT+AGG | 0.350072 | 1.4:-79564702 | MS.gene070956:CDS |
| TATTACTTCCTAAGCAACTA+TGG | 0.363567 | 1.4:-79563315 | MS.gene070956:CDS |
| TCAGGTGAATGGGATGGATT+TGG | 0.376714 | 1.4:-79564080 | MS.gene070956:CDS |
| ATGGTCTGAAACCCAGTAAT+AGG | 0.399405 | 1.4:+79565289 | None:intergenic |
| AGAAATATCTGAAGCAATCA+AGG | 0.405236 | 1.4:+79563548 | None:intergenic |
| ATACTTTGACCTCCCATTCT+CGG | 0.410913 | 1.4:+79563994 | None:intergenic |
| GGGAGGTCAAAGTATTTGAT+TGG | 0.431446 | 1.4:-79563986 | MS.gene070956:CDS |
| CTTACACTTCCGGTGTCTGT+AGG | 0.436617 | 1.4:+79563486 | None:intergenic |
| GAAGAATGACATAATAGAGT+TGG | 0.438887 | 1.4:-79563763 | MS.gene070956:CDS |
| TACTCAAGAACATGATCCTC+TGG | 0.452071 | 1.4:+79563936 | None:intergenic |
| CCAGAAGAATATCAGGTGAA+TGG | 0.455183 | 1.4:-79564091 | MS.gene070956:CDS |
| TGCCTGAAGCATACCGAGAA+TGG | 0.461809 | 1.4:-79564007 | MS.gene070956:CDS |
| CAATTTGCCAGAAGAATATC+AGG | 0.465090 | 1.4:-79564098 | MS.gene070956:CDS |
| AGATATTTCTGGTATCTGGC+AGG | 0.473135 | 1.4:-79563535 | MS.gene070956:CDS |
| CAGAAGAATATCAGGTGAAT+GGG | 0.475043 | 1.4:-79564090 | MS.gene070956:CDS |
| TTTCTTTCAATTGGAGGAGG+AGG | 0.483111 | 1.4:-79565266 | MS.gene070956:intron |
| GGAGCAGACTTCAGTAATCA+AGG | 0.484812 | 1.4:-79564059 | MS.gene070956:CDS |
| ATGTGAAGAGGATGGAAGAG+TGG | 0.489017 | 1.4:+79565514 | None:intergenic |
| TTTGGGGCTTTCCTATTACT+GGG | 0.490821 | 1.4:-79565300 | MS.gene070956:CDS |
| AACGAACACCATAGTTGCTT+AGG | 0.494963 | 1.4:+79563307 | None:intergenic |
| GCCTGAAGCATACCGAGAAT+GGG | 0.495903 | 1.4:-79564006 | MS.gene070956:CDS |
| TGGTATGGACCGTTCAGAAA+TGG | 0.498581 | 1.4:-79563624 | MS.gene070956:CDS |
| TTCAGAAATGGTGATCAACT+TGG | 0.499904 | 1.4:-79563612 | MS.gene070956:CDS |
| AATGCATGGAGAAGGGAAAG+TGG | 0.500854 | 1.4:+79565556 | None:intergenic |
| AAAGAAATAGGCGAAATTGA+TGG | 0.502155 | 1.4:-79564690 | MS.gene070956:CDS |
| GATGGTCTGATAGGTGTAAT+GGG | 0.503950 | 1.4:-79564672 | MS.gene070956:CDS |
| TGATGGTCTGATAGGTGTAA+TGG | 0.504065 | 1.4:-79564673 | MS.gene070956:CDS |
| GTTCAGTTACTTCCCACTGT+TGG | 0.504325 | 1.4:-79563906 | MS.gene070956:CDS |
| GGTGAAACTCTAACTGAAGT+AGG | 0.504533 | 1.4:-79563268 | MS.gene070956:CDS |
| AAGAGAGGTCCTTACACTTC+CGG | 0.505168 | 1.4:+79563476 | None:intergenic |
| GCTTCAGGCACCACCGACTC+TGG | 0.507414 | 1.4:+79564020 | None:intergenic |
| ACCCGAGATTCAAAATCTTG+TGG | 0.514140 | 1.4:+79563723 | None:intergenic |
| AGGATCATGTTCTTGAGTAC+AGG | 0.519343 | 1.4:-79563932 | MS.gene070956:CDS |
| TCCTCTGGATCAGCAAGAGT+GGG | 0.521470 | 1.4:+79563951 | None:intergenic |
| GTATTTCGTGAGCAGTGGTA+TGG | 0.521766 | 1.4:-79563639 | MS.gene070956:CDS |
| GTGGCTCTTATGTTGCTGTA+TGG | 0.522927 | 1.4:-79563791 | MS.gene070956:CDS |
| TGCTGCTACGGTATACAGTT+CGG | 0.525686 | 1.4:-79563871 | MS.gene070956:CDS |
| GGCGAAATTGATGGTCTGAT+AGG | 0.528076 | 1.4:-79564681 | MS.gene070956:CDS |
| TGTGGTAGATGTGAAGAGGA+TGG | 0.531243 | 1.4:+79565506 | None:intergenic |
| CAGACTTCAGTAATCAAGGC+AGG | 0.538012 | 1.4:-79564055 | MS.gene070956:CDS |
| TTACACTTCCGGTGTCTGTA+GGG | 0.540859 | 1.4:+79563487 | None:intergenic |
| GGTTGAAGAATGCATGGAGA+AGG | 0.544763 | 1.4:+79565548 | None:intergenic |
| ATCCTCTGGATCAGCAAGAG+TGG | 0.546743 | 1.4:+79563950 | None:intergenic |
| TACAGCAACATAAGAGCCAC+TGG | 0.547352 | 1.4:+79563794 | None:intergenic |
| ATGCAGAAGTCTGTTAGAGA+TGG | 0.554984 | 1.4:-79563349 | MS.gene070956:CDS |
| GATATTTCTGGTATCTGGCA+GGG | 0.561033 | 1.4:-79563534 | MS.gene070956:CDS |
| CAACATAAGAGCCACTGGAT+TGG | 0.561674 | 1.4:+79563799 | None:intergenic |
| ATGACAAAAGTATTGAAGCT+TGG | 0.562334 | 1.4:-79564124 | MS.gene070956:CDS |
| ACTTCCCACTGTTGGATGTG+AGG | 0.571880 | 1.4:-79563898 | MS.gene070956:CDS |
| GAAACTAGAGCCTTGCAACA+TGG | 0.576817 | 1.4:-79562577 | MS.gene070956:CDS |
| TGCAGCCAATCAAGATGCAA+AGG | 0.577786 | 1.4:-79564721 | MS.gene070956:CDS |
| ACTGTATACCGTAGCAGCAT+CGG | 0.577793 | 1.4:+79563875 | None:intergenic |
| CCCCACTCTTGCTGATCCAG+AGG | 0.577837 | 1.4:-79563952 | MS.gene070956:CDS |
| GCCACTGGATTGGTAAGCAA+AGG | 0.579088 | 1.4:+79563809 | None:intergenic |
| GAACGTGGTTGAAGAATGCA+TGG | 0.579178 | 1.4:+79565542 | None:intergenic |
| ATGTGAGGCCGATGCTGCTA+CGG | 0.581645 | 1.4:-79563883 | MS.gene070956:CDS |
| CTCAAGCACTGCAAAGCCGA+AGG | 0.585448 | 1.4:-79563200 | MS.gene070956:intron |
| TGTATTAAATAATACAGAGA+TGG | 0.591790 | 1.4:-79563679 | MS.gene070956:CDS |
| AGAAATGGTGATCAACTTGG+AGG | 0.595278 | 1.4:-79563609 | MS.gene070956:CDS |
| GCCTTTGCTTACCAATCCAG+TGG | 0.595522 | 1.4:-79563810 | MS.gene070956:CDS |
| AGAATATCAGGTGAATGGGA+TGG | 0.597864 | 1.4:-79564086 | MS.gene070956:CDS |
| AGTTCGGATGAGAGAAAAGT+GGG | 0.601050 | 1.4:-79563855 | MS.gene070956:CDS |
| GTTGAAGAATGCATGGAGAA+GGG | 0.602269 | 1.4:+79565549 | None:intergenic |
| AAACTCTAACTGAAGTAGGA+TGG | 0.603041 | 1.4:-79563264 | MS.gene070956:CDS |
| CAGTTCGGATGAGAGAAAAG+TGG | 0.604404 | 1.4:-79563856 | MS.gene070956:CDS |
| TTAGAGTATTTCGTGAGCAG+TGG | 0.607973 | 1.4:-79563644 | MS.gene070956:CDS |
| TCGTTTGAACGAAACAAGGA+TGG | 0.615348 | 1.4:-79563289 | MS.gene070956:CDS |
| TACATGTGGTAGATGTGAAG+AGG | 0.617495 | 1.4:+79565502 | None:intergenic |
| AATTGAACTGCCAGAGTCGG+TGG | 0.618819 | 1.4:-79564030 | MS.gene070956:CDS |
| AGGCTATACTCCATGTTGCA+AGG | 0.623643 | 1.4:+79562567 | None:intergenic |
| TAGAAGCGAAAGCAGAATCA+CGG | 0.626937 | 1.4:+79563577 | None:intergenic |
| GGAAGAGTGGAGAAAGAACG+TGG | 0.632927 | 1.4:+79565527 | None:intergenic |
| GACGTTTGCAGAGAAGAATG+AGG | 0.633011 | 1.4:+79565580 | None:intergenic |
| TCGGCCTCACATCCAACAGT+GGG | 0.636312 | 1.4:+79563894 | None:intergenic |
| GAAATATCTGAAGCAATCAA+GGG | 0.636929 | 1.4:+79563549 | None:intergenic |
| ACTGGATTGGTAAGCAAAGG+CGG | 0.641472 | 1.4:+79563812 | None:intergenic |
| GTGTTCGTTTGAACGAAACA+AGG | 0.644440 | 1.4:-79563293 | MS.gene070956:CDS |
| GGTAATTGAACTGCCAGAGT+CGG | 0.647523 | 1.4:-79564033 | MS.gene070956:CDS |
| ATCGGCCTCACATCCAACAG+TGG | 0.651816 | 1.4:+79563893 | None:intergenic |
| AGTTGATCACCATTTCTGAA+CGG | 0.657715 | 1.4:+79563615 | None:intergenic |
| AACAGTGGGAAGTAACTGAA+CGG | 0.658899 | 1.4:+79563908 | None:intergenic |
| AAAGTGGGCGGCGAAAGCAG+TGG | 0.662083 | 1.4:-79563840 | MS.gene070956:CDS |
| AGACTTCAGTAATCAAGGCA+GGG | 0.663114 | 1.4:-79564054 | MS.gene070956:CDS |
| TGAAGCATACCGAGAATGGG+AGG | 0.666775 | 1.4:-79564003 | MS.gene070956:CDS |
| AATACAGAGATGGAGCTGCA+AGG | 0.669200 | 1.4:-79563669 | MS.gene070956:CDS |
| CCTCTGGATCAGCAAGAGTG+GGG | 0.673591 | 1.4:+79563952 | None:intergenic |
| TCGGATGAGAGAAAAGTGGG+CGG | 0.747971 | 1.4:-79563852 | MS.gene070956:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATAAAATATAAACAAT+AGG | - | chr1.4:79565087-79565106 | MS.gene070956:intron | 10.0% |
| !!! | TTAATTTAATTTCCATTTTA+TGG | - | chr1.4:79563228-79563247 | MS.gene070956:CDS | 10.0% |
| !! | AAAAAATATATCATTTGAAC+CGG | + | chr1.4:79565480-79565499 | None:intergenic | 15.0% |
| !! | AATACATATATGAAAAACAA+AGG | + | chr1.4:79564709-79564728 | None:intergenic | 15.0% |
| !! | AATATCTATATTCATGAAAT+TGG | - | chr1.4:79563623-79563642 | MS.gene070956:CDS | 15.0% |
| !! | ATACATATATGAAAAACAAA+GGG | + | chr1.4:79564708-79564727 | None:intergenic | 15.0% |
| !!! | ATTTTTATCAAACTTAATTG+TGG | - | chr1.4:79563825-79563844 | MS.gene070956:CDS | 15.0% |
| !!! | TATGTATTTTTCTGTATTAT+TGG | - | chr1.4:79564721-79564740 | MS.gene070956:CDS | 15.0% |
| !! | AAAGAATAGAAGAAAAAGAA+AGG | + | chr1.4:79562691-79562710 | None:intergenic | 20.0% |
| !! | AAATAAGGTTAAAACAGTTT+CGG | - | chr1.4:79563073-79563092 | MS.gene070956:intron | 20.0% |
| !! | AAGAATAGAAGAAAAAGAAA+GGG | + | chr1.4:79562690-79562709 | None:intergenic | 20.0% |
| !! | AATAATATTCCCATGTATTT+AGG | - | chr1.4:79562912-79562931 | MS.gene070956:intron | 20.0% |
| !! | TAGAAAATTAACAGCATATT+TGG | + | chr1.4:79563176-79563195 | None:intergenic | 20.0% |
| !! | TGAACATAATTAGTAAAAAC+TGG | + | chr1.4:79565001-79565020 | None:intergenic | 20.0% |
| !! | TGGAAAATGACAAATTAATT+GGG | + | chr1.4:79563297-79563316 | None:intergenic | 20.0% |
| !! | TGTATTAAATAATACAGAGA+TGG | - | chr1.4:79564475-79564494 | MS.gene070956:intron | 20.0% |
| !! | TTATAAGTGCTTAACTAAAT+TGG | + | chr1.4:79562952-79562971 | None:intergenic | 20.0% |
| !!! | GTATTATTGGTTTCATTATA+TGG | - | chr1.4:79564734-79564753 | MS.gene070956:CDS | 20.0% |
| ! | AAAATTCCATTCCATAAAGA+AGG | + | chr1.4:79562738-79562757 | None:intergenic | 25.0% |
| ! | AAATAGTAAACTAAACACCA+AGG | + | chr1.4:79563805-79563824 | None:intergenic | 25.0% |
| ! | AAATTCCATTCCATAAAGAA+GGG | + | chr1.4:79562737-79562756 | None:intergenic | 25.0% |
| ! | AACTATATGCAACGTTAAAT+TGG | - | chr1.4:79563654-79563673 | MS.gene070956:CDS | 25.0% |
| ! | AATAAGGTTAAAACAGTTTC+GGG | - | chr1.4:79563074-79563093 | MS.gene070956:intron | 25.0% |
| ! | ACTAAATTGGTTATCCAAAT+AGG | + | chr1.4:79562939-79562958 | None:intergenic | 25.0% |
| ! | ATAATATGGAATAGCCAAAT+AGG | + | chr1.4:79563982-79564001 | None:intergenic | 25.0% |
| ! | ATAATTGATACCCTTCTTTA+TGG | - | chr1.4:79562724-79562743 | MS.gene070956:intron | 25.0% |
| ! | ATGGAGAGTTTATGAAAATA+AGG | - | chr1.4:79563058-79563077 | MS.gene070956:intron | 25.0% |
| ! | ATTTCTTATGAGAAATAGAG+AGG | + | chr1.4:79565176-79565195 | None:intergenic | 25.0% |
| ! | CTAAATTGGTTATCCAAATA+GGG | + | chr1.4:79562938-79562957 | None:intergenic | 25.0% |
| ! | CTAATTATGTTCACATAGAT+TGG | - | chr1.4:79565008-79565027 | MS.gene070956:intron | 25.0% |
| ! | GTGGAAAATGACAAATTAAT+TGG | + | chr1.4:79563298-79563317 | None:intergenic | 25.0% |
| ! | TGAAACAGAAGAGTTTAAAA+TGG | + | chr1.4:79565508-79565527 | None:intergenic | 25.0% |
| ! | TGAAGCTATGAATAGTAAAT+TGG | - | chr1.4:79563374-79563393 | MS.gene070956:CDS | 25.0% |
| ! | TTTCTTATGAGAAATAGAGA+GGG | + | chr1.4:79565175-79565194 | None:intergenic | 25.0% |
| !! | AGTAATATCTTTTACGTGTT+TGG | + | chr1.4:79565297-79565316 | None:intergenic | 25.0% |
| !! | TCTCTATTTCTCATAAGAAA+TGG | - | chr1.4:79565175-79565194 | MS.gene070956:intron | 25.0% |
| !! | TTTAACGTTGCATATAGTTT+TGG | + | chr1.4:79563653-79563672 | None:intergenic | 25.0% |
| !!! | ATTGTTTTCATTGTTATTCG+TGG | - | chr1.4:79563199-79563218 | MS.gene070956:intron | 25.0% |
| !!! | GTATGCAATGTTTGATTTTA+AGG | - | chr1.4:79563730-79563749 | MS.gene070956:CDS | 25.0% |
| !!! | TGTTTTTATTCAAGCTTTCA+TGG | - | chr1.4:79563039-79563058 | MS.gene070956:intron | 25.0% |
| AAAGAAATAGGCGAAATTGA+TGG | - | chr1.4:79563464-79563483 | MS.gene070956:intron | 30.0% | |
| AGAAAAAGAAAGGGTTTGAA+AGG | + | chr1.4:79562681-79562700 | None:intergenic | 30.0% | |
| AGGTAGTTAGAATACCTATT+TGG | - | chr1.4:79563965-79563984 | MS.gene070956:CDS | 30.0% | |
| ATGAATTCCAAACAAGACTA+GGG | + | chr1.4:79563937-79563956 | None:intergenic | 30.0% | |
| ATTGCGAAAGTTTATGGAAA+CGG | + | chr1.4:79563112-79563131 | None:intergenic | 30.0% | |
| CCGGTATATACAAAAAATCA+CGG | + | chr1.4:79565213-79565232 | None:intergenic | 30.0% | |
| CTAAATGGAAGTGAAGAATT+AGG | + | chr1.4:79565053-79565072 | None:intergenic | 30.0% | |
| CTACATTGTATGAGTGAAAA+TGG | + | chr1.4:79563325-79563344 | None:intergenic | 30.0% | |
| GAAGAATGACATAATAGAGT+TGG | - | chr1.4:79564391-79564410 | MS.gene070956:intron | 30.0% | |
| GAGTGTTTGAATCTAAAAAC+AGG | - | chr1.4:79563396-79563415 | MS.gene070956:intron | 30.0% | |
| GTTTCTCTCTTTCTTCTAAA+TGG | + | chr1.4:79565068-79565087 | None:intergenic | 30.0% | |
| TAGATTATATCCGTTAACCA+AGG | + | chr1.4:79563892-79563911 | None:intergenic | 30.0% | |
| TATTACTTCCTAAGCAACTA+TGG | - | chr1.4:79564839-79564858 | MS.gene070956:intron | 30.0% | |
| TTGATTGCTTCAGATATTTC+TGG | - | chr1.4:79564608-79564627 | MS.gene070956:intron | 30.0% | |
| TTGGCTATTCCATATTATGA+TGG | - | chr1.4:79563984-79564003 | MS.gene070956:CDS | 30.0% | |
| ! | AGAAATATCTGAAGCAATCA+AGG | + | chr1.4:79564609-79564628 | None:intergenic | 30.0% |
| ! | ATCCACAAGATTTTGAATCT+CGG | - | chr1.4:79564429-79564448 | MS.gene070956:intron | 30.0% |
| ! | CATAATATGTAACTTGCCTT+CGG | + | chr1.4:79564973-79564992 | None:intergenic | 30.0% |
| ! | CCATTTTATGGTTGTATTGA+GGG | - | chr1.4:79563240-79563259 | MS.gene070956:CDS | 30.0% |
| ! | GAAATATCTGAAGCAATCAA+GGG | + | chr1.4:79564608-79564627 | None:intergenic | 30.0% |
| ! | GTTCTAAGTCCATCATAATA+TGG | + | chr1.4:79563996-79564015 | None:intergenic | 30.0% |
| ! | TATTTGGATTGACTTATCTG+AGG | + | chr1.4:79563160-79563179 | None:intergenic | 30.0% |
| ! | TCAGACCATTTTCTTTCAAT+TGG | - | chr1.4:79562879-79562898 | MS.gene070956:intron | 30.0% |
| ! | TCCATTTTATGGTTGTATTG+AGG | - | chr1.4:79563239-79563258 | MS.gene070956:CDS | 30.0% |
| ! | TTTGGAATTCATGCAATACT+AGG | - | chr1.4:79563945-79563964 | MS.gene070956:CDS | 30.0% |
| !! | AAGGTAGCCTATATTTTTGA+AGG | - | chr1.4:79563778-79563797 | MS.gene070956:CDS | 30.0% |
| !! | ATGACAAAAGTATTGAAGCT+TGG | - | chr1.4:79564030-79564049 | MS.gene070956:CDS | 30.0% |
| !! | ATTTTAAGGACCAAGTTAAG+TGG | - | chr1.4:79563744-79563763 | MS.gene070956:CDS | 30.0% |
| !! | TATATAGTTTGCTTGTTGTC+CGG | - | chr1.4:79565458-79565477 | MS.gene070956:intron | 30.0% |
| !!! | ATTTTTTCCACCTTGGTTAA+CGG | - | chr1.4:79563879-79563898 | MS.gene070956:CDS | 30.0% |
| !!! | CCGTGATTTTTTGTATATAC+CGG | - | chr1.4:79565210-79565229 | MS.gene070956:intron | 30.0% |
| AAAACAAAGGGTAACAAGAG+AGG | + | chr1.4:79564696-79564715 | None:intergenic | 35.0% | |
| AAACTCTAACTGAAGTAGGA+TGG | - | chr1.4:79564890-79564909 | MS.gene070956:intron | 35.0% | |
| AACCAAACATCAAGCTGAAA+AGG | + | chr1.4:79562769-79562788 | None:intergenic | 35.0% | |
| AAGGAAGCAGTGAAAGAAAT+AGG | - | chr1.4:79563452-79563471 | MS.gene070956:intron | 35.0% | |
| ACCAAACATCAAGCTGAAAA+GGG | + | chr1.4:79562768-79562787 | None:intergenic | 35.0% | |
| AGTTGATCACCATTTCTGAA+CGG | + | chr1.4:79564542-79564561 | None:intergenic | 35.0% | |
| ATGGATGTATCCAATATACC+AGG | - | chr1.4:79565262-79565281 | MS.gene070956:intron | 35.0% | |
| ATGGCTTTCTATTTAACTCC+AGG | - | chr1.4:79564753-79564772 | MS.gene070956:intron | 35.0% | |
| ATTATATCCGTTAACCAAGG+TGG | + | chr1.4:79563889-79563908 | None:intergenic | 35.0% | |
| CAAATAGGGCCTAAATACAT+GGG | + | chr1.4:79562924-79562943 | None:intergenic | 35.0% | |
| CAATTTGCCAGAAGAATATC+AGG | - | chr1.4:79564056-79564075 | MS.gene070956:CDS | 35.0% | |
| CAGAAGAATATCAGGTGAAT+GGG | - | chr1.4:79564064-79564083 | MS.gene070956:CDS | 35.0% | |
| CATCAAGTAAGTAAGACCAA+GGG | - | chr1.4:79563518-79563537 | MS.gene070956:CDS | 35.0% | |
| CATGAATTCCAAACAAGACT+AGG | + | chr1.4:79563938-79563957 | None:intergenic | 35.0% | |
| CCAAGGTCCTTCAAAAATAT+AGG | + | chr1.4:79563788-79563807 | None:intergenic | 35.0% | |
| CCCTCAATACAACCATAAAA+TGG | + | chr1.4:79563243-79563262 | None:intergenic | 35.0% | |
| CTCCTCCAATTGAAAGAAAA+TGG | + | chr1.4:79562887-79562906 | None:intergenic | 35.0% | |
| CTTGTGATTGCGAAAGTTTA+TGG | + | chr1.4:79563118-79563137 | None:intergenic | 35.0% | |
| GGACAACAAGCAAACTATAT+AGG | + | chr1.4:79565459-79565478 | None:intergenic | 35.0% | |
| GTGTGTCTATACTCACAAAA+TGG | - | chr1.4:79565243-79565262 | MS.gene070956:intron | 35.0% | |
| TCATCAAGTAAGTAAGACCA+AGG | - | chr1.4:79563517-79563536 | MS.gene070956:CDS | 35.0% | |
| TCCTTAAAGGATGAAACTAG+TGG | - | chr1.4:79563708-79563727 | MS.gene070956:CDS | 35.0% | |
| TGATACCCTTCTTTATGGAA+TGG | - | chr1.4:79562729-79562748 | MS.gene070956:intron | 35.0% | |
| TGCAGCAAAAAGGGAAATTT+GGG | - | chr1.4:79562837-79562856 | MS.gene070956:intron | 35.0% | |
| TGTATCCAATATACCAGGAA+AGG | - | chr1.4:79565267-79565286 | MS.gene070956:CDS | 35.0% | |
| TTCAAAAACAGATGACCTCA+AGG | + | chr1.4:79563594-79563613 | None:intergenic | 35.0% | |
| TTCAGAAATGGTGATCAACT+TGG | - | chr1.4:79564542-79564561 | MS.gene070956:intron | 35.0% | |
| TTGTATGAGTGAAAATGGTG+AGG | + | chr1.4:79563320-79563339 | None:intergenic | 35.0% | |
| TTTCCTGCTGACATAAAACA+AGG | + | chr1.4:79565421-79565440 | None:intergenic | 35.0% | |
| ! | AAGATTTTGAATCTCGGGTT+AGG | - | chr1.4:79564435-79564454 | MS.gene070956:intron | 35.0% |
| ! | ACCACTAGTTTCATCCTTTA+AGG | + | chr1.4:79563712-79563731 | None:intergenic | 35.0% |
| ! | CAAGTTGAAAAAATCACCCT+TGG | + | chr1.4:79563537-79563556 | None:intergenic | 35.0% |
| ! | CATCCTTTAAGGACCAATTT+GGG | + | chr1.4:79563701-79563720 | None:intergenic | 35.0% |
| ! | CATTTTCTTTCAATTGGAGG+AGG | - | chr1.4:79562885-79562904 | MS.gene070956:intron | 35.0% |
| ! | GACCATTTTCTTTCAATTGG+AGG | - | chr1.4:79562882-79562901 | MS.gene070956:intron | 35.0% |
| ! | GTGATCTTTCAAGAGCTTTT+AGG | - | chr1.4:79564775-79564794 | MS.gene070956:intron | 35.0% |
| ! | TAGGATGGCTTTTAGATCAA+GGG | - | chr1.4:79564905-79564924 | MS.gene070956:intron | 35.0% |
| ! | TATGTTCACATAGATTGGCT+TGG | - | chr1.4:79565013-79565032 | MS.gene070956:intron | 35.0% |
| ! | TCATCCTTTAAGGACCAATT+TGG | + | chr1.4:79563702-79563721 | None:intergenic | 35.0% |
| ! | TCCACAAGATTTTGAATCTC+GGG | - | chr1.4:79564430-79564449 | MS.gene070956:intron | 35.0% |
| ! | TGTCACATTTTTGCCCAAAT+TGG | - | chr1.4:79563685-79563704 | MS.gene070956:CDS | 35.0% |
| ! | TGTTTTATGTCAGCAGGAAA+TGG | - | chr1.4:79565421-79565440 | MS.gene070956:intron | 35.0% |
| !! | CCTATATTTTTGAAGGACCT+TGG | - | chr1.4:79563785-79563804 | MS.gene070956:CDS | 35.0% |
| !! | CTTCAGATATTTCTGGTATC+TGG | - | chr1.4:79564615-79564634 | MS.gene070956:intron | 35.0% |
| AAAGCTCTTGAAAGATCACC+TGG | + | chr1.4:79564774-79564793 | None:intergenic | 40.0% | |
| AACAGTGGGAAGTAACTGAA+CGG | + | chr1.4:79564249-79564268 | None:intergenic | 40.0% | |
| AACGAACACCATAGTTGCTT+AGG | + | chr1.4:79564850-79564869 | None:intergenic | 40.0% | |
| ACAAGTCACACTCACCAATA+AGG | - | chr1.4:79565143-79565162 | MS.gene070956:intron | 40.0% | |
| ACCATACTCTTCATCTTTGC+AGG | - | chr1.4:79565537-79565556 | MS.gene070956:CDS | 40.0% | |
| ACCCGAGATTCAAAATCTTG+TGG | + | chr1.4:79564434-79564453 | None:intergenic | 40.0% | |
| AGAAATGGTGATCAACTTGG+AGG | - | chr1.4:79564545-79564564 | MS.gene070956:intron | 40.0% | |
| AGAATATCAGGTGAATGGGA+TGG | - | chr1.4:79564068-79564087 | MS.gene070956:CDS | 40.0% | |
| AGACTTCAGTAATCAAGGCA+GGG | - | chr1.4:79564100-79564119 | MS.gene070956:CDS | 40.0% | |
| AGAGTTCACTGCAGCAAAAA+GGG | - | chr1.4:79562828-79562847 | MS.gene070956:intron | 40.0% | |
| AGGATCATGTTCTTGAGTAC+AGG | - | chr1.4:79564222-79564241 | MS.gene070956:intron | 40.0% | |
| AGTTCGGATGAGAGAAAAGT+GGG | - | chr1.4:79564299-79564318 | MS.gene070956:intron | 40.0% | |
| ATACTTTGACCTCCCATTCT+CGG | + | chr1.4:79564163-79564182 | None:intergenic | 40.0% | |
| ATCACAAGTGCTCATGTTAG+TGG | - | chr1.4:79563130-79563149 | MS.gene070956:intron | 40.0% | |
| ATGCAGAAGTCTGTTAGAGA+TGG | - | chr1.4:79564805-79564824 | MS.gene070956:intron | 40.0% | |
| CAAGGCAAGACAAGATGAAA+TGG | + | chr1.4:79563576-79563595 | None:intergenic | 40.0% | |
| CCAAATAGGGCCTAAATACA+TGG | + | chr1.4:79562925-79562944 | None:intergenic | 40.0% | |
| CCAGAAGAATATCAGGTGAA+TGG | - | chr1.4:79564063-79564082 | MS.gene070956:CDS | 40.0% | |
| CCATGTATTTAGGCCCTATT+TGG | - | chr1.4:79562922-79562941 | MS.gene070956:intron | 40.0% | |
| CCATTCACCTGATATTCTTC+TGG | + | chr1.4:79564066-79564085 | None:intergenic | 40.0% | |
| CTGCAGCAAAAAGGGAAATT+TGG | - | chr1.4:79562836-79562855 | MS.gene070956:intron | 40.0% | |
| GACAAGATGAAATGGTAGGA+AGG | + | chr1.4:79563568-79563587 | None:intergenic | 40.0% | |
| GATGGTCTGATAGGTGTAAT+GGG | - | chr1.4:79563482-79563501 | MS.gene070956:intron | 40.0% | |
| GCAAGACAAGATGAAATGGT+AGG | + | chr1.4:79563572-79563591 | None:intergenic | 40.0% | |
| GCAGCAAAAAGGGAAATTTG+GGG | - | chr1.4:79562838-79562857 | MS.gene070956:intron | 40.0% | |
| GGGCAAAAATGTGACATTGA+AGG | + | chr1.4:79563681-79563700 | None:intergenic | 40.0% | |
| GGTGAAACTCTAACTGAAGT+AGG | - | chr1.4:79564886-79564905 | MS.gene070956:intron | 40.0% | |
| GTGTTCGTTTGAACGAAACA+AGG | - | chr1.4:79564861-79564880 | MS.gene070956:intron | 40.0% | |
| GTTGAAGAATGCATGGAGAA+GGG | + | chr1.4:79562608-79562627 | None:intergenic | 40.0% | |
| TACATGTGGTAGATGTGAAG+AGG | + | chr1.4:79562655-79562674 | None:intergenic | 40.0% | |
| TACTCAAGAACATGATCCTC+TGG | + | chr1.4:79564221-79564240 | None:intergenic | 40.0% | |
| TAGAAGCGAAAGCAGAATCA+CGG | + | chr1.4:79564580-79564599 | None:intergenic | 40.0% | |
| TAGACACACATTGCTAGAAC+CGG | + | chr1.4:79565232-79565251 | None:intergenic | 40.0% | |
| TATGAGTGAAAATGGTGAGG+TGG | + | chr1.4:79563317-79563336 | None:intergenic | 40.0% | |
| TCCAAACAAGACTAGGGAAA+GGG | + | chr1.4:79563931-79563950 | None:intergenic | 40.0% | |
| TCCTGCAAAGATGAAGAGTA+TGG | + | chr1.4:79565541-79565560 | None:intergenic | 40.0% | |
| TCGTTTGAACGAAACAAGGA+TGG | - | chr1.4:79564865-79564884 | MS.gene070956:intron | 40.0% | |
| TGATGGTCTGATAGGTGTAA+TGG | - | chr1.4:79563481-79563500 | MS.gene070956:intron | 40.0% | |
| TGCTTCCTTTGCATCTTGAT+TGG | + | chr1.4:79563441-79563460 | None:intergenic | 40.0% | |
| TTAAGGACCAAGTTAAGTGG+AGG | - | chr1.4:79563747-79563766 | MS.gene070956:CDS | 40.0% | |
| TTAAGTGGAGGACTGATGTA+AGG | - | chr1.4:79563759-79563778 | MS.gene070956:CDS | 40.0% | |
| TTCCAAACAAGACTAGGGAA+AGG | + | chr1.4:79563932-79563951 | None:intergenic | 40.0% | |
| TTGCCCAAATTGGTCCTTAA+AGG | - | chr1.4:79563695-79563714 | MS.gene070956:CDS | 40.0% | |
| TTTCATCTTGTCTTGCCTTG+AGG | - | chr1.4:79563576-79563595 | MS.gene070956:CDS | 40.0% | |
| TTTCTTTCAATTGGAGGAGG+AGG | - | chr1.4:79562888-79562907 | MS.gene070956:intron | 40.0% | |
| ! | ATGGTCTGAAACCCAGTAAT+AGG | + | chr1.4:79562868-79562887 | None:intergenic | 40.0% |
| ! | ATTTGGGGCTTTCCTATTAC+TGG | - | chr1.4:79562853-79562872 | MS.gene070956:intron | 40.0% |
| ! | GGGAGGTCAAAGTATTTGAT+TGG | - | chr1.4:79564168-79564187 | MS.gene070956:intron | 40.0% |
| ! | GGTTTGAAAGGAAGTACATG+TGG | + | chr1.4:79562669-79562688 | None:intergenic | 40.0% |
| ! | GTAGGATGGCTTTTAGATCA+AGG | - | chr1.4:79564904-79564923 | MS.gene070956:intron | 40.0% |
| ! | TATTGGTGAGTGTGACTTGT+CGG | + | chr1.4:79565143-79565162 | None:intergenic | 40.0% |
| ! | TCCCTTTTCAGCTTGATGTT+TGG | - | chr1.4:79562764-79562783 | MS.gene070956:intron | 40.0% |
| ! | TTAGAGTATTTCGTGAGCAG+TGG | - | chr1.4:79564510-79564529 | MS.gene070956:intron | 40.0% |
| ! | TTTGGGGCTTTCCTATTACT+GGG | - | chr1.4:79562854-79562873 | MS.gene070956:intron | 40.0% |
| !! | AGATATTTCTGGTATCTGGC+AGG | - | chr1.4:79564619-79564638 | MS.gene070956:intron | 40.0% |
| !! | GATATTTCTGGTATCTGGCA+GGG | - | chr1.4:79564620-79564639 | MS.gene070956:intron | 40.0% |
| !!! | GCTGTTGATTTTTTCCACCT+TGG | - | chr1.4:79563872-79563891 | MS.gene070956:CDS | 40.0% |
| !!! | GTTCCTTGTTTTATGTCAGC+AGG | - | chr1.4:79565415-79565434 | MS.gene070956:intron | 40.0% |
| AAGAGAGGTCCTTACACTTC+CGG | + | chr1.4:79564681-79564700 | None:intergenic | 45.0% | |
| AATACAGAGATGGAGCTGCA+AGG | - | chr1.4:79564485-79564504 | MS.gene070956:intron | 45.0% | |
| AATGCATGGAGAAGGGAAAG+TGG | + | chr1.4:79562601-79562620 | None:intergenic | 45.0% | |
| ACTGTATACCGTAGCAGCAT+CGG | + | chr1.4:79564282-79564301 | None:intergenic | 45.0% | |
| AGAGAGGGTCTCTACCTTAT+TGG | + | chr1.4:79565160-79565179 | None:intergenic | 45.0% | |
| ATGTGAAGAGGATGGAAGAG+TGG | + | chr1.4:79562643-79562662 | None:intergenic | 45.0% | |
| CAACATAAGAGCCACTGGAT+TGG | + | chr1.4:79564358-79564377 | None:intergenic | 45.0% | |
| CAGACTTCAGTAATCAAGGC+AGG | - | chr1.4:79564099-79564118 | MS.gene070956:CDS | 45.0% | |
| CAGAGTTCACTGCAGCAAAA+AGG | - | chr1.4:79562827-79562846 | MS.gene070956:intron | 45.0% | |
| CAGTTCGGATGAGAGAAAAG+TGG | - | chr1.4:79564298-79564317 | MS.gene070956:intron | 45.0% | |
| CATCAGTCCTCCACTTAACT+TGG | + | chr1.4:79563757-79563776 | None:intergenic | 45.0% | |
| GAAACTAGAGCCTTGCAACA+TGG | - | chr1.4:79565577-79565596 | MS.gene070956:CDS | 45.0% | |
| GAACGTGGTTGAAGAATGCA+TGG | + | chr1.4:79562615-79562634 | None:intergenic | 45.0% | |
| GACGTTTGCAGAGAAGAATG+AGG | + | chr1.4:79562577-79562596 | None:intergenic | 45.0% | |
| GGAGCAGACTTCAGTAATCA+AGG | - | chr1.4:79564095-79564114 | MS.gene070956:CDS | 45.0% | |
| GGTAATTGAACTGCCAGAGT+CGG | - | chr1.4:79564121-79564140 | MS.gene070956:CDS | 45.0% | |
| GGTTGAAGAATGCATGGAGA+AGG | + | chr1.4:79562609-79562628 | None:intergenic | 45.0% | |
| GTATTTCGTGAGCAGTGGTA+TGG | - | chr1.4:79564515-79564534 | MS.gene070956:intron | 45.0% | |
| GTGGCTCTTATGTTGCTGTA+TGG | - | chr1.4:79564363-79564382 | MS.gene070956:intron | 45.0% | |
| GTGTGCCTTTCCTGGTATAT+TGG | + | chr1.4:79565275-79565294 | None:intergenic | 45.0% | |
| GTTCAGTTACTTCCCACTGT+TGG | - | chr1.4:79564248-79564267 | MS.gene070956:intron | 45.0% | |
| TACAGCAACATAAGAGCCAC+TGG | + | chr1.4:79564363-79564382 | None:intergenic | 45.0% | |
| TGCAGCCAATCAAGATGCAA+AGG | - | chr1.4:79563433-79563452 | MS.gene070956:intron | 45.0% | |
| TGCTGCTACGGTATACAGTT+CGG | - | chr1.4:79564283-79564302 | MS.gene070956:intron | 45.0% | |
| TGGTATGGACCGTTCAGAAA+TGG | - | chr1.4:79564530-79564549 | MS.gene070956:intron | 45.0% | |
| TGTGGTAGATGTGAAGAGGA+TGG | + | chr1.4:79562651-79562670 | None:intergenic | 45.0% | |
| TTACACTTCCGGTGTCTGTA+GGG | + | chr1.4:79564670-79564689 | None:intergenic | 45.0% | |
| ! | ACTTTTAGCCCTACAGACAC+CGG | - | chr1.4:79564659-79564678 | MS.gene070956:CDS | 45.0% |
| ! | ATGGCTTTTAGATCAAGGGC+AGG | - | chr1.4:79564909-79564928 | MS.gene070956:intron | 45.0% |
| ! | GGCGAAATTGATGGTCTGAT+AGG | - | chr1.4:79563473-79563492 | MS.gene070956:intron | 45.0% |
| ! | TCAGGTGAATGGGATGGATT+TGG | - | chr1.4:79564074-79564093 | MS.gene070956:CDS | 45.0% |
| !! | ACCCTTTCCCTAGTCTTGTT+TGG | - | chr1.4:79563927-79563946 | MS.gene070956:CDS | 45.0% |
| !! | ACTGGATTGGTAAGCAAAGG+CGG | + | chr1.4:79564345-79564364 | None:intergenic | 45.0% |
| !! | GTTCACATAGATTGGCTTGG+AGG | - | chr1.4:79565016-79565035 | MS.gene070956:intron | 45.0% |
| AATTGAACTGCCAGAGTCGG+TGG | - | chr1.4:79564124-79564143 | MS.gene070956:CDS | 50.0% | |
| ACTTCCCACTGTTGGATGTG+AGG | - | chr1.4:79564256-79564275 | MS.gene070956:intron | 50.0% | |
| ATCCTCTGGATCAGCAAGAG+TGG | + | chr1.4:79564207-79564226 | None:intergenic | 50.0% | |
| CTTACACTTCCGGTGTCTGT+AGG | + | chr1.4:79564671-79564690 | None:intergenic | 50.0% | |
| GCCTGAAGCATACCGAGAAT+GGG | - | chr1.4:79564148-79564167 | MS.gene070956:intron | 50.0% | |
| GCCTTTGCTTACCAATCCAG+TGG | - | chr1.4:79564344-79564363 | MS.gene070956:intron | 50.0% | |
| GGAAGAGTGGAGAAAGAACG+TGG | + | chr1.4:79562630-79562649 | None:intergenic | 50.0% | |
| TCCCATTCTCGGTATGCTTC+AGG | + | chr1.4:79564152-79564171 | None:intergenic | 50.0% | |
| TCCTCTGGATCAGCAAGAGT+GGG | + | chr1.4:79564206-79564225 | None:intergenic | 50.0% | |
| TCGGATGAGAGAAAAGTGGG+CGG | - | chr1.4:79564302-79564321 | MS.gene070956:intron | 50.0% | |
| TGAAGCATACCGAGAATGGG+AGG | - | chr1.4:79564151-79564170 | MS.gene070956:intron | 50.0% | |
| TGCCTGAAGCATACCGAGAA+TGG | - | chr1.4:79564147-79564166 | MS.gene070956:intron | 50.0% | |
| TGGACTTAGAACTGCGCTGA+AGG | - | chr1.4:79564004-79564023 | MS.gene070956:CDS | 50.0% | |
| ! | CTACAGACACCGGAAGTGTA+AGG | - | chr1.4:79564669-79564688 | MS.gene070956:CDS | 50.0% |
| !! | GATTGGCTTGGAGGATCACA+TGG | - | chr1.4:79565025-79565044 | MS.gene070956:intron | 50.0% |
| !! | GCCACTGGATTGGTAAGCAA+AGG | + | chr1.4:79564348-79564367 | None:intergenic | 50.0% |
| ATCGGCCTCACATCCAACAG+TGG | + | chr1.4:79564264-79564283 | None:intergenic | 55.0% | |
| ATGTGAGGCCGATGCTGCTA+CGG | - | chr1.4:79564271-79564290 | MS.gene070956:intron | 55.0% | |
| CCTCTGGATCAGCAAGAGTG+GGG | + | chr1.4:79564205-79564224 | None:intergenic | 55.0% | |
| TCGGCCTCACATCCAACAGT+GGG | + | chr1.4:79564263-79564282 | None:intergenic | 55.0% | |
| ! | CTCAAGCACTGCAAAGCCGA+AGG | - | chr1.4:79564954-79564973 | MS.gene070956:intron | 55.0% |
| !! | CGTGTTTGGTGTGCCTTTCC+TGG | + | chr1.4:79565283-79565302 | None:intergenic | 55.0% |
| AAAGTGGGCGGCGAAAGCAG+TGG | - | chr1.4:79564314-79564333 | MS.gene070956:intron | 60.0% | |
| CCCCACTCTTGCTGATCCAG+AGG | - | chr1.4:79564202-79564221 | MS.gene070956:intron | 60.0% | |
| !! | GCTTCAGGCACCACCGACTC+TGG | + | chr1.4:79564137-79564156 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 79562570 | 79565606 | 79562570 | ID=MS.gene070956 |
| chr1.4 | mRNA | 79562570 | 79565606 | 79562570 | ID=MS.gene070956.t1;Parent=MS.gene070956 |
| chr1.4 | exon | 79565505 | 79565606 | 79565505 | ID=MS.gene070956.t1.exon1;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79565505 | 79565606 | 79565505 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| chr1.4 | exon | 79565267 | 79565346 | 79565267 | ID=MS.gene070956.t1.exon2;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79565267 | 79565346 | 79565267 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| chr1.4 | exon | 79564653 | 79564758 | 79564653 | ID=MS.gene070956.t1.exon3;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79564653 | 79564758 | 79564653 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| chr1.4 | exon | 79563491 | 79564150 | 79563491 | ID=MS.gene070956.t1.exon4;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79563491 | 79564150 | 79563491 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| chr1.4 | exon | 79563201 | 79563401 | 79563201 | ID=MS.gene070956.t1.exon5;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79563201 | 79563401 | 79563201 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| chr1.4 | exon | 79562570 | 79562617 | 79562570 | ID=MS.gene070956.t1.exon6;Parent=MS.gene070956.t1 |
| chr1.4 | CDS | 79562570 | 79562617 | 79562570 | ID=cds.MS.gene070956.t1;Parent=MS.gene070956.t1 |
| Gene Sequence |
| Protein sequence |
