Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77754.t1 | XP_003605669.2 | 98.4 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 2.40E-150 | 541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77754.t1 | Q9FKF4 | 84.2 | 278 | 37 | 2 | 35 | 312 | 37 | 307 | 8.0e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77754.t1 | G7JRE7 | 98.4 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 1.8e-150 | 541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene77754 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene77754 | 0.833754 | 4.45E-56 | -1.69E-46 |
| MS.gene050625 | MS.gene77754 | 0.831913 | 1.27E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene77754 | 0.841757 | 3.92E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene77754 | 0.815714 | 8.02E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene77754 | 0.836041 | 1.18E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene77754 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene77754 | -0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene77754 | 0.836156 | 1.10E-56 | -1.69E-46 |
| MS.gene052346 | MS.gene77754 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene77754 | 0.875793 | 2.33E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene77754 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene77754 | 0.802819 | 4.68E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene77754 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene77754 | 0.818763 | 1.65E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene77754 | 0.861534 | 9.59E-64 | -1.69E-46 |
| MS.gene053873 | MS.gene77754 | 0.809406 | 1.92E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene77754 | 0.826108 | 3.25E-54 | -1.69E-46 |
| MS.gene054548 | MS.gene77754 | 0.822637 | 2.13E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene77754 | 0.835139 | 2.00E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene77754 | 0.810981 | 8.80E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene77754 | 0.80693 | 6.48E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene77754 | 0.810493 | 1.12E-50 | -1.69E-46 |
| MS.gene055486 | MS.gene77754 | 0.816291 | 5.97E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene77754 | 0.813736 | 2.20E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene77754 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene77754 | 0.849873 | 2.45E-60 | -1.69E-46 |
| MS.gene055911 | MS.gene77754 | 0.852712 | 3.86E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene77754 | 0.823298 | 1.49E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene77754 | 0.810308 | 1.23E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene77754 | 0.847738 | 9.56E-60 | -1.69E-46 |
| MS.gene05664 | MS.gene77754 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene05666 | MS.gene77754 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene77754 | 0.802146 | 6.44E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene77754 | 0.801514 | 8.69E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene77754 | 0.806026 | 1.00E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene77754 | 0.835571 | 1.55E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene77754 | 0.825616 | 4.25E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene77754 | 0.830093 | 3.57E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene77754 | 0.820764 | 5.77E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene77754 | 0.824342 | 8.50E-54 | -1.69E-46 |
| MS.gene058376 | MS.gene77754 | 0.836235 | 1.05E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene77754 | 0.825244 | 5.21E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene77754 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene77754 | 0.835701 | 1.44E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene77754 | 0.816141 | 6.44E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene77754 | 0.856834 | 2.46E-62 | -1.69E-46 |
| MS.gene059462 | MS.gene77754 | 0.817617 | 3.01E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene77754 | 0.804733 | 1.87E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene77754 | 0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene059868 | MS.gene77754 | 0.817531 | 3.14E-52 | -1.69E-46 |
| MS.gene059870 | MS.gene77754 | 0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene059876 | MS.gene77754 | 0.847295 | 1.27E-59 | -1.69E-46 |
| MS.gene059933 | MS.gene77754 | 0.812072 | 5.09E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene77754 | 0.8104 | 1.17E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene77754 | 0.835303 | 1.81E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene77754 | 0.832128 | 1.13E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene77754 | 0.800557 | 1.36E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034845 | MS.gene77754 | PPI |
| MS.gene81766 | MS.gene77754 | PPI |
| MS.gene065735 | MS.gene77754 | PPI |
| MS.gene056897 | MS.gene77754 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77754.t1 | MTR_4g035650 | 98.403 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| MS.gene77754.t1 | MTR_4g035650 | 97.444 | 313 | 4 | 3 | 1 | 312 | 1 | 310 | 0.0 | 618 |
| MS.gene77754.t1 | MTR_1g059670 | 61.409 | 298 | 101 | 4 | 18 | 312 | 19 | 305 | 1.67e-118 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77754.t1 | AT5G61670 | 84.532 | 278 | 36 | 1 | 35 | 312 | 37 | 307 | 1.32e-171 | 478 |
| MS.gene77754.t1 | AT5G61670 | 84.532 | 278 | 36 | 1 | 35 | 312 | 37 | 307 | 1.32e-171 | 478 |
| MS.gene77754.t1 | AT5G06130 | 63.309 | 278 | 97 | 2 | 40 | 312 | 38 | 315 | 4.90e-124 | 358 |
| MS.gene77754.t1 | AT5G06130 | 67.532 | 231 | 74 | 1 | 83 | 312 | 1 | 231 | 1.92e-114 | 330 |
Find 54 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATCTTGTACAGTTTC+AGG | 0.123968 | 4.4:+69241042 | None:intergenic |
| GGAATGAATGATGGGAAATT+AGG | 0.261986 | 4.4:+69239562 | None:intergenic |
| CATTCCATTCTTGCCTCCTT+TGG | 0.293420 | 4.4:-69239545 | MS.gene77754:intron |
| AAGAAATTCAAGATAATATT+CGG | 0.309405 | 4.4:-69241005 | MS.gene77754:CDS |
| TGGTGTAATCTCTGCATTAA+TGG | 0.340651 | 4.4:-69238258 | MS.gene77754:CDS |
| ATTTAGATGAATGAATCTTT+TGG | 0.346573 | 4.4:+69241289 | None:intergenic |
| TTCGCTTGCCATAGCCATTC+CGG | 0.349664 | 4.4:+69237065 | None:intergenic |
| CCTATTGTGGCATCATTCTC+TGG | 0.350969 | 4.4:-69238290 | MS.gene77754:CDS |
| TTGGAGCTTAAGCTTGGAAT+AGG | 0.400506 | 4.4:-69238614 | MS.gene77754:CDS |
| TGTTCAAATTGCTCCGGATC+TGG | 0.412046 | 4.4:-69237813 | MS.gene77754:CDS |
| CGCAGGTTCTGTATTATAGA+AGG | 0.413449 | 4.4:-69241066 | MS.gene77754:intron |
| CTTACCAAAGGAGGCAAGAA+TGG | 0.419900 | 4.4:+69239541 | None:intergenic |
| CCAGAGAATGATGCCACAAT+AGG | 0.441935 | 4.4:+69238290 | None:intergenic |
| TCATTCTCTGGTGGAGCTGT+TGG | 0.444757 | 4.4:-69238278 | MS.gene77754:CDS |
| TGCAAATACTGTCTTGGTAC+TGG | 0.456169 | 4.4:-69238194 | MS.gene77754:intron |
| AGGCTGATCTCCACCATTGA+AGG | 0.461185 | 4.4:+69237860 | None:intergenic |
| ATGTCCAACCTTGCCAGATC+CGG | 0.468622 | 4.4:+69237800 | None:intergenic |
| GGCAAGAATGGAATGAATGA+TGG | 0.471565 | 4.4:+69239553 | None:intergenic |
| TCTCAGTTGGAGCTTAAGCT+TGG | 0.471643 | 4.4:-69238620 | MS.gene77754:intron |
| GATAAACAATGTAAAACAAC+AGG | 0.476410 | 4.4:-69238228 | MS.gene77754:CDS |
| AGGAGGATACCGGTTCAATC+AGG | 0.490296 | 4.4:+69237880 | None:intergenic |
| TGCAGACTTCAGCAAACCTC+AGG | 0.503518 | 4.4:-69239428 | MS.gene77754:intron |
| GGAGCAATTTGAACATCTCT+CGG | 0.515917 | 4.4:+69237821 | None:intergenic |
| AAAAGATGCAAATACTGTCT+TGG | 0.520613 | 4.4:-69238200 | MS.gene77754:CDS |
| ATATTAAACATCTAATCAAA+AGG | 0.525443 | 4.4:+69237024 | None:intergenic |
| CAATAAGAGGTGGCGTGTCA+TGG | 0.530836 | 4.4:-69241249 | MS.gene77754:CDS |
| TCTTTGCACCGGAATGGCTA+TGG | 0.534453 | 4.4:-69237073 | MS.gene77754:CDS |
| CCACCATTGAAGGAGGATAC+CGG | 0.540857 | 4.4:+69237870 | None:intergenic |
| AGCACTTGTCCTGATTGAAC+CGG | 0.540917 | 4.4:-69237889 | MS.gene77754:CDS |
| GAACCGGTATCCTCCTTCAA+TGG | 0.546734 | 4.4:-69237873 | MS.gene77754:CDS |
| GAGAGATGTTCAAATTGCTC+CGG | 0.560664 | 4.4:-69237819 | MS.gene77754:CDS |
| AACATGTCTTTGCACCGGAA+TGG | 0.564128 | 4.4:-69237079 | MS.gene77754:CDS |
| GCAAGAATGGAATGAATGAT+GGG | 0.568641 | 4.4:+69239554 | None:intergenic |
| TGCATCTGCCTATGCAGTTG+AGG | 0.569061 | 4.4:-69238559 | MS.gene77754:intron |
| AAATTGCTCCGGATCTGGCA+AGG | 0.573161 | 4.4:-69237808 | MS.gene77754:intron |
| AAAAGAAGATGTTGTGTTTG+GGG | 0.576587 | 4.4:-69241352 | None:intergenic |
| TAGTCAGGTTGATCCTATTG+TGG | 0.580018 | 4.4:-69238303 | MS.gene77754:CDS |
| TAATCAAAAGGATCAATTCG+CGG | 0.580042 | 4.4:+69237036 | None:intergenic |
| GAGCTTAAGCTTGGAATAGG+TGG | 0.586112 | 4.4:-69238611 | MS.gene77754:CDS |
| ATTGTGGCATCATTCTCTGG+TGG | 0.587254 | 4.4:-69238287 | MS.gene77754:CDS |
| AAGATAATATTCGGAGTCGA+AGG | 0.587933 | 4.4:-69240996 | MS.gene77754:CDS |
| ATTCCGGTGCAAAGACATGT+TGG | 0.592847 | 4.4:+69237081 | None:intergenic |
| CCGGTATCCTCCTTCAATGG+TGG | 0.599228 | 4.4:-69237870 | MS.gene77754:CDS |
| TGTCCAACATGTCTTTGCAC+CGG | 0.600830 | 4.4:-69237084 | MS.gene77754:CDS |
| TAAATCTTACACTCGGAGCA+AGG | 0.601691 | 4.4:+69239349 | None:intergenic |
| CACATGAAACTTACCAAAGG+AGG | 0.605147 | 4.4:+69239532 | None:intergenic |
| GGACGCTACCTCAACTGCAT+AGG | 0.605455 | 4.4:+69238551 | None:intergenic |
| GTTTAGTTGAAGACATGTTG+TGG | 0.621480 | 4.4:+69241316 | None:intergenic |
| CTGATCTCCACCATTGAAGG+AGG | 0.622262 | 4.4:+69237863 | None:intergenic |
| AAAGAAGATGTTGTGTTTGG+GGG | 0.630615 | 4.4:-69241351 | None:intergenic |
| AAAACAGTTTCAATAAGAGG+TGG | 0.630936 | 4.4:-69241259 | MS.gene77754:CDS |
| AGGTTGCATAATACTGCCTG+AGG | 0.643276 | 4.4:+69239412 | None:intergenic |
| TGTGCTCGATGTTCAAACAC+GGG | 0.651986 | 4.4:-69237912 | MS.gene77754:CDS |
| ATGTGCTCGATGTTCAAACA+CGG | 0.661742 | 4.4:-69237913 | MS.gene77754:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATTCAAGATAATATT+CGG | - | chr4.4:69237374-69237393 | MS.gene77754:intron | 15.0% |
| !! | AATTATGGTTTACAATTTAA+TGG | - | chr4.4:69240936-69240955 | MS.gene77754:intron | 15.0% |
| !! | AGAAATGAATAAAAGAATTA+TGG | - | chr4.4:69240921-69240940 | MS.gene77754:intron | 15.0% |
| !! | AGTATTACTTATCTATATTA+TGG | + | chr4.4:69240662-69240681 | None:intergenic | 15.0% |
| !! | ATTATGGTTTACAATTTAAT+GGG | - | chr4.4:69240937-69240956 | MS.gene77754:intron | 15.0% |
| !! | TGAACTTTAAATTAAGTTAA+AGG | + | chr4.4:69240733-69240752 | None:intergenic | 15.0% |
| !! | TGATAATATTCTTATTGATA+AGG | - | chr4.4:69239555-69239574 | MS.gene77754:CDS | 15.0% |
| !! | TGTGATTATATACAATTATA+CGG | + | chr4.4:69238320-69238339 | None:intergenic | 15.0% |
| !!! | AATTCCATCATTTTTTAAAA+CGG | + | chr4.4:69237279-69237298 | None:intergenic | 15.0% |
| !!! | TAAAATTGAGATGAATTTTT+TGG | - | chr4.4:69238520-69238539 | MS.gene77754:intron | 15.0% |
| !! | AAATTTGATTCTTAAAATGC+AGG | + | chr4.4:69240237-69240256 | None:intergenic | 20.0% |
| !! | AGAAATAAAAAGAAGAATGT+CGG | - | chr4.4:69239162-69239181 | MS.gene77754:intron | 20.0% |
| !! | ATTACTTATCTATATTATGG+CGG | + | chr4.4:69240659-69240678 | None:intergenic | 20.0% |
| !! | CAACATAATTTCGTTATTAT+TGG | + | chr4.4:69240049-69240068 | None:intergenic | 20.0% |
| !! | CAATAATAACGAAATTATGT+TGG | - | chr4.4:69240047-69240066 | MS.gene77754:intron | 20.0% |
| !! | GTCATAGAAAAATGAATTTA+TGG | - | chr4.4:69237801-69237820 | MS.gene77754:intron | 20.0% |
| !! | TAATGAAGTAGAATATGAAA+TGG | + | chr4.4:69239126-69239145 | None:intergenic | 20.0% |
| !! | TGTTATAATCTATATTGTAG+CGG | - | chr4.4:69239247-69239266 | MS.gene77754:intron | 20.0% |
| !! | TTAAGAATCAAATTTCTGAA+TGG | - | chr4.4:69240242-69240261 | MS.gene77754:intron | 20.0% |
| !! | TTCATATTCTACTTCATTAA+TGG | - | chr4.4:69239127-69239146 | MS.gene77754:intron | 20.0% |
| !!! | AAATAACAATTGACTTTTCA+AGG | - | chr4.4:69239194-69239213 | MS.gene77754:intron | 20.0% |
| !!! | AATAACAATTGACTTTTCAA+GGG | - | chr4.4:69239195-69239214 | MS.gene77754:intron | 20.0% |
| !!! | ATATACTCTTGTTATTTTGT+AGG | - | chr4.4:69238717-69238736 | MS.gene77754:intron | 20.0% |
| !!! | ATTCCATCATTTTTTAAAAC+GGG | + | chr4.4:69237278-69237297 | None:intergenic | 20.0% |
| !!! | ATTTAGATGAATGAATCTTT+TGG | + | chr4.4:69237093-69237112 | None:intergenic | 20.0% |
| !!! | ATTTATGCATTTTACTCTAT+GGG | - | chr4.4:69238674-69238693 | MS.gene77754:intron | 20.0% |
| !!! | ATTTTCGTTTTGAAAGATAA+AGG | + | chr4.4:69240790-69240809 | None:intergenic | 20.0% |
| !!! | CAGTTTGATTTTATTACTTA+TGG | - | chr4.4:69238477-69238496 | MS.gene77754:intron | 20.0% |
| !!! | GAATAAGATTTTCTTACATA+TGG | - | chr4.4:69237405-69237424 | MS.gene77754:intron | 20.0% |
| !!! | GTATATTGTTGATAAGAAAA+AGG | + | chr4.4:69238703-69238722 | None:intergenic | 20.0% |
| !!! | TGACATTTCTATTATACTTT+TGG | - | chr4.4:69240426-69240445 | MS.gene77754:intron | 20.0% |
| !!! | TGCAATTACTAACATATTTT+TGG | + | chr4.4:69237675-69237694 | None:intergenic | 20.0% |
| ! | AAAGCTGAAAATTATTCTCT+AGG | - | chr4.4:69239950-69239969 | MS.gene77754:intron | 25.0% |
| ! | AAATTAAGTTAAAGGACTTC+TGG | + | chr4.4:69240725-69240744 | None:intergenic | 25.0% |
| ! | AAGATATAGACGATTAATCT+AGG | + | chr4.4:69241186-69241205 | None:intergenic | 25.0% |
| ! | AAGCTGAAAATTATTCTCTA+GGG | - | chr4.4:69239951-69239970 | MS.gene77754:intron | 25.0% |
| ! | AGAAAAACAGTTTCAATAAG+AGG | - | chr4.4:69237117-69237136 | MS.gene77754:intron | 25.0% |
| ! | AGAATTAAAAATGCTGAACT+TGG | - | chr4.4:69238763-69238782 | MS.gene77754:intron | 25.0% |
| ! | AGTTACAATTATCATCATCA+AGG | + | chr4.4:69241116-69241135 | None:intergenic | 25.0% |
| ! | ATATGATTATGATTCTCAGA+GGG | - | chr4.4:69238208-69238227 | MS.gene77754:CDS | 25.0% |
| ! | ATGGTGAAATTGAATCATTA+TGG | - | chr4.4:69240261-69240280 | MS.gene77754:intron | 25.0% |
| ! | ATTGTATATAATCACACATG+TGG | - | chr4.4:69238324-69238343 | MS.gene77754:intron | 25.0% |
| ! | CATAGAGTAAAATGCATAAA+TGG | + | chr4.4:69238675-69238694 | None:intergenic | 25.0% |
| ! | CATCATTATTGTTCTTTCTT+CGG | + | chr4.4:69237718-69237737 | None:intergenic | 25.0% |
| ! | CATTGCTAAGAAAATAGTTA+AGG | + | chr4.4:69239537-69239556 | None:intergenic | 25.0% |
| ! | GATAAACAATGTAAAACAAC+AGG | - | chr4.4:69240151-69240170 | MS.gene77754:intron | 25.0% |
| ! | GGGTGTATTTCATAAAAAAA+GGG | + | chr4.4:69237256-69237275 | None:intergenic | 25.0% |
| ! | GGTGTATTTCATAAAAAAAG+GGG | + | chr4.4:69237255-69237274 | None:intergenic | 25.0% |
| ! | GTAAAAGTAAATCTTACACT+CGG | + | chr4.4:69239040-69239059 | None:intergenic | 25.0% |
| ! | GTTACAATTATCATCATCAA+GGG | + | chr4.4:69241115-69241134 | None:intergenic | 25.0% |
| ! | GTTTATCATAGATTGTATGT+AGG | - | chr4.4:69237755-69237774 | MS.gene77754:intron | 25.0% |
| ! | TAAGACTTCAAAAATCACTT+CGG | - | chr4.4:69240208-69240227 | MS.gene77754:intron | 25.0% |
| ! | TATTCTTATTGATAAGGCTT+AGG | - | chr4.4:69239561-69239580 | MS.gene77754:CDS | 25.0% |
| ! | TTCATTTCTACTAGCTAAAA+TGG | + | chr4.4:69240910-69240929 | None:intergenic | 25.0% |
| !! | ATCTCTTTAGAAGAATTGAA+GGG | - | chr4.4:69238114-69238133 | MS.gene77754:intron | 25.0% |
| !! | ATGTGTGTGATATGATATTT+TGG | - | chr4.4:69238236-69238255 | MS.gene77754:CDS | 25.0% |
| !! | ATTAGTGGGATAATTCTTTT+TGG | - | chr4.4:69239001-69239020 | MS.gene77754:intron | 25.0% |
| !! | ATTGCCCTTTTATGAAATTT+TGG | - | chr4.4:69240852-69240871 | MS.gene77754:intron | 25.0% |
| !! | CATTTATGCATTTTACTCTA+TGG | - | chr4.4:69238673-69238692 | MS.gene77754:intron | 25.0% |
| !! | CTTTTTATATCCATCTTTTG+TGG | - | chr4.4:69239685-69239704 | MS.gene77754:intron | 25.0% |
| !! | TGGTAATTTGAATTTTCAAC+AGG | + | chr4.4:69238655-69238674 | None:intergenic | 25.0% |
| !! | TTATTGTAATTTTTGTCTCG+TGG | + | chr4.4:69239387-69239406 | None:intergenic | 25.0% |
| !!! | ATAACAATTGACTTTTCAAG+GGG | - | chr4.4:69239196-69239215 | MS.gene77754:intron | 25.0% |
| !!! | ATTTTTATTGTTTTGAACGC+AGG | - | chr4.4:69237296-69237315 | MS.gene77754:intron | 25.0% |
| !!! | TGATGTTTTTACATGAGTTT+TGG | - | chr4.4:69237733-69237752 | MS.gene77754:intron | 25.0% |
| !!! | TTCCATCATTTTTTAAAACG+GGG | + | chr4.4:69237277-69237296 | None:intergenic | 25.0% |
| AAAACAGTTTCAATAAGAGG+TGG | - | chr4.4:69237120-69237139 | MS.gene77754:intron | 30.0% | |
| AAAAGATGCAAATACTGTCT+TGG | - | chr4.4:69240179-69240198 | MS.gene77754:intron | 30.0% | |
| AAAGAAGTCAATAGTTGTTC+GGG | + | chr4.4:69238297-69238316 | None:intergenic | 30.0% | |
| AACAAATCGTTGTCAAATAG+AGG | - | chr4.4:69239276-69239295 | MS.gene77754:intron | 30.0% | |
| AACAGACTTTACTTATCTTC+AGG | - | chr4.4:69237585-69237604 | MS.gene77754:intron | 30.0% | |
| AAGATGCCAATTATCTAAAG+TGG | - | chr4.4:69237918-69237937 | MS.gene77754:CDS | 30.0% | |
| AGCTGAAAATTATTCTCTAG+GGG | - | chr4.4:69239952-69239971 | MS.gene77754:intron | 30.0% | |
| ATAATCACACATGTGGTTTA+TGG | - | chr4.4:69238331-69238350 | MS.gene77754:intron | 30.0% | |
| CAAGTTCCACTTTAGATAAT+TGG | + | chr4.4:69237927-69237946 | None:intergenic | 30.0% | |
| CATATGATTATGATTCTCAG+AGG | - | chr4.4:69238207-69238226 | MS.gene77754:CDS | 30.0% | |
| CTAAAGAGATCCACTATAAA+AGG | + | chr4.4:69238104-69238123 | None:intergenic | 30.0% | |
| CTCAAGTCAGTAGAATATTT+AGG | - | chr4.4:69238033-69238052 | MS.gene77754:intron | 30.0% | |
| GAAAGAAGTCAATAGTTGTT+CGG | + | chr4.4:69238298-69238317 | None:intergenic | 30.0% | |
| GAATTGTTCAATGTTTAAGC+AGG | - | chr4.4:69239429-69239448 | MS.gene77754:intron | 30.0% | |
| GGCACCAAAATTTCATAAAA+GGG | + | chr4.4:69240859-69240878 | None:intergenic | 30.0% | |
| GGGGTGTATTTCATAAAAAA+AGG | + | chr4.4:69237257-69237276 | None:intergenic | 30.0% | |
| GTAAATAGGTGACAATAATC+AGG | + | chr4.4:69239858-69239877 | None:intergenic | 30.0% | |
| GTAACAATTTGCATTACGAA+AGG | + | chr4.4:69240297-69240316 | None:intergenic | 30.0% | |
| GTATCTTCACTTCAGAATTA+TGG | + | chr4.4:69240975-69240994 | None:intergenic | 30.0% | |
| TAATCAAAAGGATCAATTCG+CGG | + | chr4.4:69241346-69241365 | None:intergenic | 30.0% | |
| TAGACATAGACTAATTAGCT+TGG | - | chr4.4:69241157-69241176 | MS.gene77754:intron | 30.0% | |
| TAGATAATTGGCATCTTATG+CGG | + | chr4.4:69237915-69237934 | None:intergenic | 30.0% | |
| TAGTCTATGTCTAGATAACA+TGG | + | chr4.4:69241150-69241169 | None:intergenic | 30.0% | |
| TATTTACTTATTCTTCGCAG+AGG | - | chr4.4:69239871-69239890 | MS.gene77754:intron | 30.0% | |
| TCTGCGAAGAATAAGTAAAT+AGG | + | chr4.4:69239872-69239891 | None:intergenic | 30.0% | |
| TGGCACCAAAATTTCATAAA+AGG | + | chr4.4:69240860-69240879 | None:intergenic | 30.0% | |
| TTACTAAATGCCACAAAAGA+TGG | + | chr4.4:69239698-69239717 | None:intergenic | 30.0% | |
| TTATGTTGGAAATTGTAGTC+AGG | - | chr4.4:69240061-69240080 | MS.gene77754:intron | 30.0% | |
| ! | AATTTGAAATGCTTGGCAAA+TGG | - | chr4.4:69238907-69238926 | MS.gene77754:intron | 30.0% |
| ! | CATAAAAGGGCAATTTTTCA+CGG | + | chr4.4:69240846-69240865 | None:intergenic | 30.0% |
| ! | GATCTCTTTAGAAGAATTGA+AGG | - | chr4.4:69238113-69238132 | MS.gene77754:intron | 30.0% |
| ! | GATTTTCTTACATATGGAAG+AGG | - | chr4.4:69237411-69237430 | MS.gene77754:intron | 30.0% |
| ! | TACTTGTAGTACTCTTTTTG+AGG | + | chr4.4:69239650-69239669 | None:intergenic | 30.0% |
| ! | TGCTTTCAATTTGAAATGCT+TGG | - | chr4.4:69238900-69238919 | MS.gene77754:intron | 30.0% |
| ! | TGTACAAGATTTTGCTAAGA+TGG | - | chr4.4:69237345-69237364 | MS.gene77754:intron | 30.0% |
| ! | TGTTAACTCTCTAGTTCATA+GGG | + | chr4.4:69237639-69237658 | None:intergenic | 30.0% |
| !! | ACCTGTTTTTCTCTTATTAG+TGG | - | chr4.4:69238986-69239005 | MS.gene77754:intron | 30.0% |
| !! | CCTGTTTTTCTCTTATTAGT+GGG | - | chr4.4:69238987-69239006 | MS.gene77754:intron | 30.0% |
| !!! | CAGGTTTTTTGCATTAAACT+TGG | + | chr4.4:69238636-69238655 | None:intergenic | 30.0% |
| !!! | TCCATCATTTTTTAAAACGG+GGG | + | chr4.4:69237276-69237295 | None:intergenic | 30.0% |
| !!! | TGAGATGAATTTTTTGGCTA+TGG | - | chr4.4:69238526-69238545 | MS.gene77754:intron | 30.0% |
| !!! | TTGTTATTTTGTAGGTTCGT+AGG | - | chr4.4:69238725-69238744 | MS.gene77754:intron | 30.0% |
| AAGATAATATTCGGAGTCGA+AGG | - | chr4.4:69237383-69237402 | MS.gene77754:intron | 35.0% | |
| ACAACACAATAGAAGAGAGA+GGG | - | chr4.4:69239360-69239379 | MS.gene77754:CDS | 35.0% | |
| ACTGATAAAAACTCTGCTAC+TGG | - | chr4.4:69237212-69237231 | MS.gene77754:intron | 35.0% | |
| AGACGACAATTCACTTACAA+AGG | + | chr4.4:69238178-69238197 | None:intergenic | 35.0% | |
| AGATAATTGGCATCTTATGC+GGG | + | chr4.4:69237914-69237933 | None:intergenic | 35.0% | |
| AGGTGACAATAATCAGGAAA+TGG | + | chr4.4:69239852-69239871 | None:intergenic | 35.0% | |
| AGTCACATGAAACTTACCAA+AGG | + | chr4.4:69238853-69238872 | None:intergenic | 35.0% | |
| ATGTAGGAAGATGAAGATGA+AGG | - | chr4.4:69237839-69237858 | MS.gene77754:CDS | 35.0% | |
| ATTATTGCTACAAACCCAGA+AGG | + | chr4.4:69241215-69241234 | None:intergenic | 35.0% | |
| CATGAGAATCCAATCCAAAT+TGG | - | chr4.4:69238259-69238278 | MS.gene77754:CDS | 35.0% | |
| CCCACTAATAAGAGAAAAAC+AGG | + | chr4.4:69238990-69239009 | None:intergenic | 35.0% | |
| CTAAAGTGGAACTTGAATGA+TGG | - | chr4.4:69237932-69237951 | MS.gene77754:intron | 35.0% | |
| CTGATAAAAACTCTGCTACT+GGG | - | chr4.4:69237213-69237232 | MS.gene77754:intron | 35.0% | |
| CTTATCTTCAGGAAAAACTC+CGG | - | chr4.4:69237596-69237615 | MS.gene77754:intron | 35.0% | |
| GAATCTTCTCAACTACTCAA+TGG | + | chr4.4:69238145-69238164 | None:intergenic | 35.0% | |
| GATTGTATGTAGGAAGATGA+AGG | - | chr4.4:69237765-69237784 | MS.gene77754:intron | 35.0% | |
| GCAAAATCTTGTACAGTTTC+AGG | + | chr4.4:69237340-69237359 | None:intergenic | 35.0% | |
| GCAAGAATGGAATGAATGAT+GGG | + | chr4.4:69238828-69238847 | None:intergenic | 35.0% | |
| GTAGAATATTTAGGTGAGTG+AGG | - | chr4.4:69238042-69238061 | MS.gene77754:intron | 35.0% | |
| GTGTTGTCAATCATGAATAG+TGG | + | chr4.4:69239347-69239366 | None:intergenic | 35.0% | |
| GTTACTGCTTTCAACTGTTA+AGG | - | chr4.4:69240312-69240331 | MS.gene77754:intron | 35.0% | |
| GTTTAGTTGAAGACATGTTG+TGG | + | chr4.4:69237066-69237085 | None:intergenic | 35.0% | |
| TACTCGTCTAATTTCTCAGT+TGG | - | chr4.4:69239746-69239765 | MS.gene77754:intron | 35.0% | |
| TATATCTTCGCATACCTTCT+GGG | - | chr4.4:69241198-69241217 | MS.gene77754:CDS | 35.0% | |
| TGATACTGAATTCTGATTGC+AGG | - | chr4.4:69241267-69241286 | MS.gene77754:CDS | 35.0% | |
| TGGTGTAATCTCTGCATTAA+TGG | - | chr4.4:69240121-69240140 | MS.gene77754:intron | 35.0% | |
| TGTAGGAAGATGAAGATGAA+GGG | - | chr4.4:69237840-69237859 | MS.gene77754:CDS | 35.0% | |
| TTGTCAAATAGAGGCTATAG+CGG | - | chr4.4:69239285-69239304 | MS.gene77754:intron | 35.0% | |
| TTTGGACTGAAGATCACTAA+AGG | + | chr4.4:69240822-69240841 | None:intergenic | 35.0% | |
| ! | AATCCAATCCAAATTGGTCT+TGG | - | chr4.4:69238265-69238284 | MS.gene77754:CDS | 35.0% |
| ! | AGTAGCAGAGTTTTTATCAG+TGG | + | chr4.4:69237213-69237232 | None:intergenic | 35.0% |
| ! | AGTGGGATAATTCTTTTTGG+TGG | - | chr4.4:69239004-69239023 | MS.gene77754:intron | 35.0% |
| ! | GGAATGAATGATGGGAAATT+AGG | + | chr4.4:69238820-69238839 | None:intergenic | 35.0% |
| ! | GTGTTAACTCTCTAGTTCAT+AGG | + | chr4.4:69237640-69237659 | None:intergenic | 35.0% |
| ! | GTTAACTCTCTAGTTCATAG+GGG | + | chr4.4:69237638-69237657 | None:intergenic | 35.0% |
| ! | GTTTTTATCAGTGGTATCAG+AGG | + | chr4.4:69237204-69237223 | None:intergenic | 35.0% |
| ! | TCGAACTCGTGTTATCATTT+TGG | + | chr4.4:69237543-69237562 | None:intergenic | 35.0% |
| ! | TTAAGTTCACTGTTGCTTGT+AGG | - | chr4.4:69238390-69238409 | MS.gene77754:intron | 35.0% |
| ! | TTTGAACATCTCTCGGTTTT+TGG | + | chr4.4:69240554-69240573 | None:intergenic | 35.0% |
| ! | TTTGAGGTAGCATGATCAAA+AGG | + | chr4.4:69239634-69239653 | None:intergenic | 35.0% |
| !! | TAGGAAGTACTGCAAATTGA+TGG | - | chr4.4:69239580-69239599 | MS.gene77754:CDS | 35.0% |
| !!! | ACCCCCGTTTTAAAAAATGA+TGG | - | chr4.4:69237272-69237291 | MS.gene77754:intron | 35.0% |
| !!! | ATGAAATTTTGGTGCCATGT+TGG | - | chr4.4:69240863-69240882 | MS.gene77754:intron | 35.0% |
| !!! | CTATTATACTTTTGGCTTGC+AGG | - | chr4.4:69240434-69240453 | MS.gene77754:intron | 35.0% |
| !!! | TAGTTAAGGAGAGTGCTTTT+AGG | + | chr4.4:69239523-69239542 | None:intergenic | 35.0% |
| ACACGAGTTCGATTCTTAGA+TGG | - | chr4.4:69237551-69237570 | MS.gene77754:intron | 40.0% | |
| ACTGTACCCGAGTGTTAATA+AGG | + | chr4.4:69241072-69241091 | None:intergenic | 40.0% | |
| AGAGCAGTGTTGTCAAATAG+CGG | - | chr4.4:69239219-69239238 | MS.gene77754:intron | 40.0% | |
| AGGAAAAACTCCGGATTACT+AGG | - | chr4.4:69237605-69237624 | MS.gene77754:intron | 40.0% | |
| ATGTGCTCGATGTTCAAACA+CGG | - | chr4.4:69240466-69240485 | MS.gene77754:intron | 40.0% | |
| ATTAACACTCGGGTACAGTT+TGG | - | chr4.4:69241073-69241092 | MS.gene77754:intron | 40.0% | |
| CACATGAAACTTACCAAAGG+AGG | + | chr4.4:69238850-69238869 | None:intergenic | 40.0% | |
| CCAGTAACAGCAATTGCATA+GGG | + | chr4.4:69239455-69239474 | None:intergenic | 40.0% | |
| CGCAGGTTCTGTATTATAGA+AGG | - | chr4.4:69237313-69237332 | MS.gene77754:intron | 40.0% | |
| CTATATCTTCGCATACCTTC+TGG | - | chr4.4:69241197-69241216 | MS.gene77754:CDS | 40.0% | |
| CTTCCAAAATAAGGCCAACA+TGG | + | chr4.4:69240880-69240899 | None:intergenic | 40.0% | |
| GACAACACAATAGAAGAGAG+AGG | - | chr4.4:69239359-69239378 | MS.gene77754:CDS | 40.0% | |
| GAGAGATGTTCAAATTGCTC+CGG | - | chr4.4:69240560-69240579 | MS.gene77754:intron | 40.0% | |
| GATGAAGATGAAGGGATGAT+TGG | - | chr4.4:69237848-69237867 | MS.gene77754:CDS | 40.0% | |
| GCAATGCACCCAAAAGTAAA+GGG | + | chr4.4:69239483-69239502 | None:intergenic | 40.0% | |
| GGAAAAACTCCGGATTACTA+GGG | - | chr4.4:69237606-69237625 | MS.gene77754:intron | 40.0% | |
| GGAGCAATTTGAACATCTCT+CGG | + | chr4.4:69240561-69240580 | None:intergenic | 40.0% | |
| GGCAAGAATGGAATGAATGA+TGG | + | chr4.4:69238829-69238848 | None:intergenic | 40.0% | |
| TAAATCTTACACTCGGAGCA+AGG | + | chr4.4:69239033-69239052 | None:intergenic | 40.0% | |
| TGCAAATACTGTCTTGGTAC+TGG | - | chr4.4:69240185-69240204 | MS.gene77754:intron | 40.0% | |
| TGCAATGCACCCAAAAGTAA+AGG | + | chr4.4:69239484-69239503 | None:intergenic | 40.0% | |
| TTGCACCAGTACAAAAGAGT+CGG | + | chr4.4:69239095-69239114 | None:intergenic | 40.0% | |
| TTGGAGCTTAAGCTTGGAAT+AGG | - | chr4.4:69239765-69239784 | MS.gene77754:intron | 40.0% | |
| ! | ACCTCTGCCTTATTAACACT+CGG | - | chr4.4:69241062-69241081 | MS.gene77754:CDS | 40.0% |
| ! | AGGGCAATTTTTCACGGTTT+TGG | + | chr4.4:69240840-69240859 | None:intergenic | 40.0% |
| ! | GGCATCGAACTTCCAAAATA+AGG | + | chr4.4:69240889-69240908 | None:intergenic | 40.0% |
| ! | TCTCTAGGGGCATATTCTAT+TGG | - | chr4.4:69239965-69239984 | MS.gene77754:intron | 40.0% |
| ! | TGAATCCGACTCTTTTGTAC+TGG | - | chr4.4:69239087-69239106 | MS.gene77754:intron | 40.0% |
| !! | TAGTCAGGTTGATCCTATTG+TGG | - | chr4.4:69240076-69240095 | MS.gene77754:intron | 40.0% |
| !! | TGAATGATGGTTGATGACGA+CGG | - | chr4.4:69237945-69237964 | MS.gene77754:intron | 40.0% |
| !! | TGGCCAATCCCTTTACTTTT+GGG | - | chr4.4:69239472-69239491 | MS.gene77754:intron | 40.0% |
| !!! | TCGGTTTTTGGTGGTGATAA+AGG | + | chr4.4:69240542-69240561 | None:intergenic | 40.0% |
| AAAGAGTCGGATTCACATCG+AGG | + | chr4.4:69239082-69239101 | None:intergenic | 45.0% | |
| AACATGTCTTTGCACCGGAA+TGG | - | chr4.4:69241300-69241319 | MS.gene77754:CDS | 45.0% | |
| AGCACTTGTCCTGATTGAAC+CGG | - | chr4.4:69240490-69240509 | MS.gene77754:intron | 45.0% | |
| AGGTTGCATAATACTGCCTG+AGG | + | chr4.4:69238970-69238989 | None:intergenic | 45.0% | |
| ATGTTGTGTTTGGGGGTAGT+TGG | - | chr4.4:69237035-69237054 | MS.gene77754:CDS | 45.0% | |
| ATTCCGGTGCAAAGACATGT+TGG | + | chr4.4:69241301-69241320 | None:intergenic | 45.0% | |
| ATTGTGGCATCATTCTCTGG+TGG | - | chr4.4:69240092-69240111 | MS.gene77754:intron | 45.0% | |
| CACTATAAAAGGACCTCCTC+AGG | + | chr4.4:69238093-69238112 | None:intergenic | 45.0% | |
| CATTCCATTCTTGCCTCCTT+TGG | - | chr4.4:69238834-69238853 | MS.gene77754:intron | 45.0% | |
| CCAGAGAATGATGCCACAAT+AGG | + | chr4.4:69240092-69240111 | None:intergenic | 45.0% | |
| CCTATTGTGGCATCATTCTC+TGG | - | chr4.4:69240089-69240108 | MS.gene77754:intron | 45.0% | |
| CTTACCAAAGGAGGCAAGAA+TGG | + | chr4.4:69238841-69238860 | None:intergenic | 45.0% | |
| CTTATGCGGGAAACTTTCCT+CGG | + | chr4.4:69237901-69237920 | None:intergenic | 45.0% | |
| GAAGATGAAGGGATGATTGG+TGG | - | chr4.4:69237851-69237870 | MS.gene77754:CDS | 45.0% | |
| GAGCCAAGACCAATTTGGAT+TGG | + | chr4.4:69238271-69238290 | None:intergenic | 45.0% | |
| GAGCTTAAGCTTGGAATAGG+TGG | - | chr4.4:69239768-69239787 | MS.gene77754:intron | 45.0% | |
| GCACCCAAAAGTAAAGGGAT+TGG | + | chr4.4:69239478-69239497 | None:intergenic | 45.0% | |
| GCAGAGGTCTAACGACAAAA+AGG | + | chr4.4:69241050-69241069 | None:intergenic | 45.0% | |
| GCCAGTAACAGCAATTGCAT+AGG | + | chr4.4:69239456-69239475 | None:intergenic | 45.0% | |
| TCAAGGGAACAATGTTGACG+TGG | + | chr4.4:69241099-69241118 | None:intergenic | 45.0% | |
| TCTCAGTTGGAGCTTAAGCT+TGG | - | chr4.4:69239759-69239778 | MS.gene77754:intron | 45.0% | |
| TGGCGTCAGATTATCACTGT+TGG | - | chr4.4:69239985-69240004 | MS.gene77754:intron | 45.0% | |
| TGTCCAACATGTCTTTGCAC+CGG | - | chr4.4:69241295-69241314 | MS.gene77754:CDS | 45.0% | |
| TGTGCTCGATGTTCAAACAC+GGG | - | chr4.4:69240467-69240486 | MS.gene77754:intron | 45.0% | |
| TGTTCAAATTGCTCCGGATC+TGG | - | chr4.4:69240566-69240585 | MS.gene77754:intron | 45.0% | |
| TTGAGCATCAGAATGCTAGC+AGG | + | chr4.4:69238018-69238037 | None:intergenic | 45.0% | |
| ! | CCCTATGCAATTGCTGTTAC+TGG | - | chr4.4:69239452-69239471 | MS.gene77754:intron | 45.0% |
| ! | CCTCTGCCTTATTAACACTC+GGG | - | chr4.4:69241063-69241082 | MS.gene77754:CDS | 45.0% |
| ! | CTGAGGAGGTCCTTTTATAG+TGG | - | chr4.4:69238091-69238110 | MS.gene77754:intron | 45.0% |
| ! | CTGGCCAATCCCTTTACTTT+TGG | - | chr4.4:69239471-69239490 | MS.gene77754:intron | 45.0% |
| !! | GAACATCTCTCGGTTTTTGG+TGG | + | chr4.4:69240551-69240570 | None:intergenic | 45.0% |
| !! | GTGCTATAGCACTGATGAGT+AGG | - | chr4.4:69239307-69239326 | MS.gene77754:intron | 45.0% |
| !! | TTGATGACGACGGAACATAG+TGG | - | chr4.4:69237955-69237974 | MS.gene77754:intron | 45.0% |
| !!! | GTGCCATGTTGGCCTTATTT+TGG | - | chr4.4:69240874-69240893 | MS.gene77754:intron | 45.0% |
| !! | AAAAATTAAATTTAAAAAAG+TGG | - | chr4.4:69240999-69241018 | MS.gene77754:CDS | 5.0% |
| AAATTGCTCCGGATCTGGCA+AGG | - | chr4.4:69240571-69240590 | MS.gene77754:intron | 50.0% | |
| AGAGGAAACTCCTTTGACCG+AGG | - | chr4.4:69237881-69237900 | MS.gene77754:CDS | 50.0% | |
| AGGCTGATCTCCACCATTGA+AGG | + | chr4.4:69240522-69240541 | None:intergenic | 50.0% | |
| ATGACGACGGAACATAGTGG+AGG | - | chr4.4:69237958-69237977 | MS.gene77754:intron | 50.0% | |
| ATGTCCAACCTTGCCAGATC+CGG | + | chr4.4:69240582-69240601 | None:intergenic | 50.0% | |
| CAATAAGAGGTGGCGTGTCA+TGG | - | chr4.4:69237130-69237149 | MS.gene77754:intron | 50.0% | |
| CCACCATTGAAGGAGGATAC+CGG | + | chr4.4:69240512-69240531 | None:intergenic | 50.0% | |
| CCCGAGTGTTAATAAGGCAG+AGG | + | chr4.4:69241066-69241085 | None:intergenic | 50.0% | |
| CTGATCTCCACCATTGAAGG+AGG | + | chr4.4:69240519-69240538 | None:intergenic | 50.0% | |
| GAACCGGTATCCTCCTTCAA+TGG | - | chr4.4:69240506-69240525 | MS.gene77754:intron | 50.0% | |
| GGACTGAGCCAAGACCAATT+TGG | + | chr4.4:69238276-69238295 | None:intergenic | 50.0% | |
| GGGAAACTTTCCTCGGTCAA+AGG | + | chr4.4:69237894-69237913 | None:intergenic | 50.0% | |
| TCATTCTCTGGTGGAGCTGT+TGG | - | chr4.4:69240101-69240120 | MS.gene77754:intron | 50.0% | |
| TCTTTGCACCGGAATGGCTA+TGG | - | chr4.4:69241306-69241325 | MS.gene77754:CDS | 50.0% | |
| TGATGTGTACCTTGCTCCTG+AGG | - | chr4.4:69238074-69238093 | MS.gene77754:intron | 50.0% | |
| TGCAGACTTCAGCAAACCTC+AGG | - | chr4.4:69238951-69238970 | MS.gene77754:intron | 50.0% | |
| TGCATCTGCCTATGCAGTTG+AGG | - | chr4.4:69239820-69239839 | MS.gene77754:intron | 50.0% | |
| TGTGTTTGGGGGTAGTTGGT+GGG | - | chr4.4:69237039-69237058 | MS.gene77754:CDS | 50.0% | |
| TTCGCTTGCCATAGCCATTC+CGG | + | chr4.4:69241317-69241336 | None:intergenic | 50.0% | |
| TTGTGTTTGGGGGTAGTTGG+TGG | - | chr4.4:69237038-69237057 | MS.gene77754:CDS | 50.0% | |
| ! | ATGATTGGTGGCAAGGGAAG+AGG | - | chr4.4:69237863-69237882 | MS.gene77754:CDS | 50.0% |
| ! | GAAGGGATGATTGGTGGCAA+GGG | - | chr4.4:69237857-69237876 | MS.gene77754:CDS | 50.0% |
| ! | TGAAGGGATGATTGGTGGCA+AGG | - | chr4.4:69237856-69237875 | MS.gene77754:CDS | 50.0% |
| !! | AGGAGGATACCGGTTCAATC+AGG | + | chr4.4:69240502-69240521 | None:intergenic | 50.0% |
| !! | GGGAAGTGTCCCTAGTAATC+CGG | + | chr4.4:69237618-69237637 | None:intergenic | 50.0% |
| AAAGGACCTCCTCAGGAGCA+AGG | + | chr4.4:69238086-69238105 | None:intergenic | 55.0% | |
| CCGGTATCCTCCTTCAATGG+TGG | - | chr4.4:69240509-69240528 | MS.gene77754:intron | 55.0% | |
| GGACGCTACCTCAACTGCAT+AGG | + | chr4.4:69239831-69239850 | None:intergenic | 55.0% | |
| GGAGGGTGACGATTGATCTC+TGG | - | chr4.4:69237979-69237998 | MS.gene77754:intron | 55.0% | |
| GGGTGACGATTGATCTCTGG+CGG | - | chr4.4:69237982-69238001 | MS.gene77754:intron | 55.0% | |
| GGTGACGATTGATCTCTGGC+GGG | - | chr4.4:69237983-69238002 | MS.gene77754:intron | 55.0% | |
| GTGACGATTGATCTCTGGCG+GGG | - | chr4.4:69237984-69238003 | MS.gene77754:intron | 55.0% | |
| TGTGTACCTTGCTCCTGAGG+AGG | - | chr4.4:69238077-69238096 | MS.gene77754:intron | 55.0% | |
| ! | ACGACGGAACATAGTGGAGG+AGG | - | chr4.4:69237961-69237980 | MS.gene77754:intron | 55.0% |
| ! | CGACGGAACATAGTGGAGGA+GGG | - | chr4.4:69237962-69237981 | MS.gene77754:intron | 55.0% |
| CGATTGATCTCTGGCGGGGA+TGG | - | chr4.4:69237988-69238007 | MS.gene77754:intron | 60.0% | |
| TGCTCCGGATCTGGCAAGGT+TGG | - | chr4.4:69240575-69240594 | MS.gene77754:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 69237035 | 69241366 | 69237035 | ID=MS.gene77754 |
| chr4.4 | mRNA | 69237035 | 69241366 | 69237035 | ID=MS.gene77754.t1;Parent=MS.gene77754 |
| chr4.4 | exon | 69241167 | 69241366 | 69241167 | ID=MS.gene77754.t1.exon1;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69241167 | 69241366 | 69241167 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69240969 | 69241083 | 69240969 | ID=MS.gene77754.t1.exon2;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69240969 | 69241083 | 69240969 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69239546 | 69239662 | 69239546 | ID=MS.gene77754.t1.exon3;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69239546 | 69239662 | 69239546 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69239359 | 69239445 | 69239359 | ID=MS.gene77754.t1.exon4;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69239359 | 69239445 | 69239359 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69238560 | 69238636 | 69238560 | ID=MS.gene77754.t1.exon5;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69238560 | 69238636 | 69238560 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69238195 | 69238322 | 69238195 | ID=MS.gene77754.t1.exon6;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69238195 | 69238322 | 69238195 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69237809 | 69237945 | 69237809 | ID=MS.gene77754.t1.exon7;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69237809 | 69237945 | 69237809 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| chr4.4 | exon | 69237035 | 69237112 | 69237035 | ID=MS.gene77754.t1.exon8;Parent=MS.gene77754.t1 |
| chr4.4 | CDS | 69237035 | 69237112 | 69237035 | ID=cds.MS.gene77754.t1;Parent=MS.gene77754.t1 |
| Gene Sequence |
| Protein sequence |
