Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062294.t1 | XP_003617534.2 | 94 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 5.50E-119 | 437.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062294.t1 | Q9SEC2 | 78.6 | 201 | 41 | 2 | 67 | 265 | 59 | 259 | 6.4e-92 | 338.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062294.t1 | B7FJB1 | 94.0 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 4.0e-119 | 437.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene062294 | 0.843128 | 1.69E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene062294 | 0.839929 | 1.18E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene062294 | 0.846358 | 2.28E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene062294 | 0.831249 | 1.86E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene062294 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene062294 | 0.865231 | 6.86E-65 | -1.69E-46 |
| MS.gene049657 | MS.gene062294 | 0.811696 | 6.15E-51 | -1.69E-46 |
| MS.gene049865 | MS.gene062294 | 0.852122 | 5.68E-61 | -1.69E-46 |
| MS.gene050082 | MS.gene062294 | -0.845704 | 3.44E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene062294 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene062294 | 0.81837 | 2.03E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene062294 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene062294 | 0.89651 | 3.44E-76 | -1.69E-46 |
| MS.gene050323 | MS.gene062294 | 0.878656 | 2.35E-69 | -1.69E-46 |
| MS.gene050333 | MS.gene062294 | 0.837011 | 6.68E-57 | -1.69E-46 |
| MS.gene050338 | MS.gene062294 | -0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene062294 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene062294 | 0.881339 | 2.61E-70 | -1.69E-46 |
| MS.gene050504 | MS.gene062294 | 0.858844 | 6.23E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene062294 | 0.852321 | 4.98E-61 | -1.69E-46 |
| MS.gene050577 | MS.gene062294 | 0.873755 | 1.15E-67 | -1.69E-46 |
| MS.gene050612 | MS.gene062294 | 0.866326 | 3.09E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene062294 | 0.850404 | 1.74E-60 | -1.69E-46 |
| MS.gene050697 | MS.gene062294 | 0.844263 | 8.42E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene062294 | 0.831713 | 1.43E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene062294 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene062294 | 0.830077 | 3.60E-55 | -1.69E-46 |
| MS.gene050864 | MS.gene062294 | -0.812233 | 4.70E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene062294 | 0.846816 | 1.71E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene062294 | 0.844884 | 5.73E-59 | -1.69E-46 |
| MS.gene050876 | MS.gene062294 | 0.896226 | 4.52E-76 | -1.69E-46 |
| MS.gene050904 | MS.gene062294 | 0.92822 | 3.93E-92 | -1.69E-46 |
| MS.gene050986 | MS.gene062294 | 0.842209 | 2.97E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene062294 | 0.834776 | 2.47E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene062294 | 0.882499 | 9.90E-71 | -1.69E-46 |
| MS.gene051364 | MS.gene062294 | -0.817008 | 4.12E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene062294 | -0.810892 | 9.20E-51 | -1.69E-46 |
| MS.gene051367 | MS.gene062294 | -0.826052 | 3.35E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene062294 | -0.821563 | 3.78E-53 | -1.69E-46 |
| MS.gene052066 | MS.gene062294 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene062294 | 0.835933 | 1.26E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene062294 | 0.860341 | 2.21E-63 | -1.69E-46 |
| MS.gene052486 | MS.gene062294 | 0.874163 | 8.37E-68 | -1.69E-46 |
| MS.gene052494 | MS.gene062294 | -0.82365 | 1.24E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene062294 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene062294 | 0.815153 | 1.07E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene062294 | 0.847263 | 1.29E-59 | -1.69E-46 |
| MS.gene053083 | MS.gene062294 | -0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene062294 | 0.832083 | 1.16E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene062294 | 0.81089 | 9.20E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene062294 | 0.815082 | 1.11E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene062294 | 0.801506 | 8.72E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene062294 | 0.820065 | 8.35E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene062294 | 0.827267 | 1.72E-54 | -1.69E-46 |
| MS.gene054638 | MS.gene062294 | 0.827845 | 1.25E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene062294 | 0.859535 | 3.87E-63 | -1.69E-46 |
| MS.gene054954 | MS.gene062294 | 0.856631 | 2.82E-62 | -1.69E-46 |
| MS.gene055158 | MS.gene062294 | -0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene055251 | MS.gene062294 | -0.839186 | 1.84E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene062294 | 0.827214 | 1.77E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene062294 | 0.840047 | 1.10E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene062294 | 0.83782 | 4.15E-57 | -1.69E-46 |
| MS.gene055634 | MS.gene062294 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene062294 | 0.873688 | 1.21E-67 | -1.69E-46 |
| MS.gene055750 | MS.gene062294 | 0.885869 | 5.60E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene062294 | 0.891714 | 3.09E-74 | -1.69E-46 |
| MS.gene055776 | MS.gene062294 | 0.846561 | 2.01E-59 | -1.69E-46 |
| MS.gene055849 | MS.gene062294 | 0.846832 | 1.69E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene062294 | 0.897566 | 1.24E-76 | -1.69E-46 |
| MS.gene056046 | MS.gene062294 | 0.815694 | 8.11E-52 | -1.69E-46 |
| MS.gene056266 | MS.gene062294 | 0.837568 | 4.81E-57 | -1.69E-46 |
| MS.gene056283 | MS.gene062294 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene062294 | 0.828699 | 7.78E-55 | -1.69E-46 |
| MS.gene056450 | MS.gene062294 | 0.84209 | 3.20E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene062294 | 0.894551 | 2.22E-75 | -1.69E-46 |
| MS.gene056510 | MS.gene062294 | 0.850656 | 1.47E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene062294 | 0.82049 | 6.67E-53 | -1.69E-46 |
| MS.gene056618 | MS.gene062294 | -0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene062294 | 0.817433 | 3.31E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene062294 | 0.861321 | 1.11E-63 | -1.69E-46 |
| MS.gene057684 | MS.gene062294 | 0.827587 | 1.44E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene062294 | 0.864579 | 1.10E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene062294 | 0.846674 | 1.87E-59 | -1.69E-46 |
| MS.gene057857 | MS.gene062294 | 0.804994 | 1.65E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene062294 | 0.867357 | 1.45E-65 | -1.69E-46 |
| MS.gene05787 | MS.gene062294 | 0.807748 | 4.34E-50 | -1.69E-46 |
| MS.gene058111 | MS.gene062294 | -0.822612 | 2.16E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene062294 | -0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene062294 | -0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene062294 | -0.813818 | 2.11E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene062294 | -0.843142 | 1.68E-58 | -1.69E-46 |
| MS.gene058335 | MS.gene062294 | 0.83371 | 4.56E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene062294 | 0.843086 | 1.74E-58 | -1.69E-46 |
| MS.gene058382 | MS.gene062294 | -0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene062294 | 0.835175 | 1.96E-56 | -1.69E-46 |
| MS.gene058719 | MS.gene062294 | 0.832108 | 1.14E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene062294 | 0.816156 | 6.39E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene062294 | 0.822157 | 2.75E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene062294 | 0.839461 | 1.56E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene062294 | 0.850388 | 1.75E-60 | -1.69E-46 |
| MS.gene059079 | MS.gene062294 | 0.838111 | 3.49E-57 | -1.69E-46 |
| MS.gene05912 | MS.gene062294 | 0.843982 | 1.00E-58 | -1.69E-46 |
| MS.gene059526 | MS.gene062294 | -0.80463 | 1.97E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene062294 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene062294 | 0.835589 | 1.54E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene062294 | 0.81452 | 1.48E-51 | -1.69E-46 |
| MS.gene059756 | MS.gene062294 | 0.818206 | 2.21E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene062294 | 0.830752 | 2.46E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene062294 | 0.874411 | 6.90E-68 | -1.69E-46 |
| MS.gene059865 | MS.gene062294 | 0.871248 | 7.90E-67 | -1.69E-46 |
| MS.gene05996 | MS.gene062294 | 0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene062294 | 0.884189 | 2.37E-71 | -1.69E-46 |
| MS.gene060187 | MS.gene062294 | -0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene06027 | MS.gene062294 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene06042 | MS.gene062294 | -0.862774 | 3.99E-64 | -1.69E-46 |
| MS.gene060526 | MS.gene062294 | 0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene062294 | -0.80451 | 2.09E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene062294 | -0.873944 | 9.93E-68 | -1.69E-46 |
| MS.gene060703 | MS.gene062294 | 0.860123 | 2.57E-63 | -1.69E-46 |
| MS.gene060762 | MS.gene062294 | 0.874311 | 7.46E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene062294 | 0.877134 | 8.02E-69 | -1.69E-46 |
| MS.gene06077 | MS.gene062294 | 0.874506 | 6.40E-68 | -1.69E-46 |
| MS.gene060823 | MS.gene062294 | -0.842827 | 2.04E-58 | -1.69E-46 |
| MS.gene060929 | MS.gene062294 | -0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene062294 | 0.904325 | 1.38E-79 | -1.69E-46 |
| MS.gene061044 | MS.gene062294 | -0.853586 | 2.17E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062294.t1 | MTR_5g092680 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 536 |
| MS.gene062294.t1 | MTR_5g092680 | 96.981 | 265 | 7 | 1 | 1 | 265 | 1 | 264 | 0.0 | 530 |
| MS.gene062294.t1 | MTR_5g092680 | 98.020 | 202 | 4 | 0 | 64 | 265 | 1 | 202 | 6.59e-151 | 419 |
| MS.gene062294.t1 | MTR_3g051460 | 80.198 | 202 | 40 | 0 | 64 | 265 | 1 | 202 | 8.90e-126 | 356 |
| MS.gene062294.t1 | MTR_3g051460 | 69.874 | 239 | 61 | 2 | 30 | 265 | 7 | 237 | 9.31e-124 | 352 |
| MS.gene062294.t1 | MTR_3g051460 | 81.622 | 185 | 34 | 0 | 81 | 265 | 1 | 185 | 2.49e-117 | 333 |
| MS.gene062294.t1 | MTR_3g075380 | 63.452 | 197 | 63 | 2 | 71 | 265 | 7 | 196 | 7.39e-83 | 247 |
| MS.gene062294.t1 | MTR_8g076060 | 43.262 | 141 | 75 | 2 | 99 | 238 | 51 | 187 | 2.23e-27 | 104 |
| MS.gene062294.t1 | MTR_8g076060 | 42.000 | 150 | 82 | 2 | 99 | 247 | 51 | 196 | 3.78e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062294.t1 | AT4G25130 | 63.454 | 249 | 87 | 2 | 21 | 265 | 10 | 258 | 1.59e-117 | 337 |
| MS.gene062294.t1 | AT5G61640 | 73.399 | 203 | 54 | 0 | 63 | 265 | 27 | 229 | 4.39e-117 | 335 |
| MS.gene062294.t1 | AT5G61640 | 73.267 | 202 | 54 | 0 | 64 | 265 | 1 | 202 | 2.07e-116 | 332 |
| MS.gene062294.t1 | AT5G07470 | 74.752 | 202 | 51 | 0 | 64 | 265 | 1 | 202 | 1.19e-114 | 328 |
| MS.gene062294.t1 | AT5G07460 | 72.678 | 183 | 50 | 0 | 83 | 265 | 36 | 218 | 6.62e-102 | 296 |
| MS.gene062294.t1 | AT2G18030 | 34.826 | 201 | 119 | 4 | 42 | 241 | 3 | 192 | 6.69e-27 | 103 |
| MS.gene062294.t1 | AT2G18030 | 34.500 | 200 | 119 | 4 | 42 | 240 | 3 | 191 | 3.07e-26 | 103 |
Find 88 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCAGCAGTTTGCTGCTTT+TGG | 0.133192 | 5.1:-74007513 | MS.gene062294:CDS |
| ATTCTCAAAGGCACATTGTT+TGG | 0.290349 | 5.1:+74007329 | None:intergenic |
| GAAAATAGCTAAAGAGTCTT+TGG | 0.300627 | 5.1:-74006449 | MS.gene062294:CDS |
| CACATTGTTTGGGATCATAT+TGG | 0.309800 | 5.1:+74007340 | None:intergenic |
| CTCAGCCCTGTAGAACTTCT+TGG | 0.322376 | 5.1:+74006375 | None:intergenic |
| CTTCTGAACAAACTTGGATT+TGG | 0.322720 | 5.1:-74007606 | MS.gene062294:CDS |
| AGGGCTTGGTTACAGTAAAA+TGG | 0.338171 | 5.1:+74007637 | None:intergenic |
| TGAGGGTAGGAACTTGGTTT+TGG | 0.356279 | 5.1:+74007710 | None:intergenic |
| AAGTTTGTTCAGAAGGTTCA+TGG | 0.357858 | 5.1:+74007614 | None:intergenic |
| ACTTATGAAGATGTGTGTTC+AGG | 0.363577 | 5.1:-74007393 | MS.gene062294:CDS |
| TACAACCTCATTGTGGTTTG+TGG | 0.365802 | 5.1:+74007368 | None:intergenic |
| TTCTCAAAGGCACATTGTTT+GGG | 0.365969 | 5.1:+74007330 | None:intergenic |
| TCGGTATATACCTGTCGATT+TGG | 0.374244 | 5.1:+74007267 | None:intergenic |
| GGAGCTGGACGTGGTGCTAT+AGG | 0.378569 | 5.1:+74007770 | None:intergenic |
| AGAATCTGCTTGATACGTTC+TGG | 0.387186 | 5.1:-74007311 | MS.gene062294:CDS |
| AATTAACCATAGCACCGAAT+TGG | 0.392915 | 5.1:+74006277 | None:intergenic |
| CTTTCTCAAGGTACTGTTGA+TGG | 0.393321 | 5.1:+74006347 | None:intergenic |
| TTTGGGGCTGGCTGCTTCTG+GGG | 0.398460 | 5.1:-74007495 | MS.gene062294:CDS |
| CAGAAGGTTCATGGAGGGCT+TGG | 0.402252 | 5.1:+74007623 | None:intergenic |
| GGAACAACAAGAGAAGCAAT+TGG | 0.418797 | 5.1:-74006428 | MS.gene062294:CDS |
| CAAACCACAATGAGGTTGTA+AGG | 0.423126 | 5.1:-74007365 | MS.gene062294:CDS |
| TTAGTCTTCCAGAGGGTGCC+TGG | 0.428460 | 5.1:-74007465 | MS.gene062294:CDS |
| CTTGAGAAAGGTGGTCGATT+CGG | 0.429559 | 5.1:-74006334 | MS.gene062294:CDS |
| TTCCTGCCAAGAAGTTCTAC+AGG | 0.437198 | 5.1:-74006381 | MS.gene062294:CDS |
| TACTAACTCCAGGCACCCTC+TGG | 0.440966 | 5.1:+74007457 | None:intergenic |
| ATGAACCTTCTGAACAAACT+TGG | 0.442513 | 5.1:-74007612 | MS.gene062294:CDS |
| CTTATGAAGATGTGTGTTCA+GGG | 0.443891 | 5.1:-74007392 | MS.gene062294:CDS |
| CAAATCCAAGTTTGTTCAGA+AGG | 0.446426 | 5.1:+74007607 | None:intergenic |
| GGGCTTGGTTACAGTAAAAT+GGG | 0.455190 | 5.1:+74007638 | None:intergenic |
| CGTGGTGCTATAGGCGCTGC+TGG | 0.457191 | 5.1:+74007779 | None:intergenic |
| ACCTGTCGATTTGGCGTAGT+AGG | 0.463222 | 5.1:+74007276 | None:intergenic |
| AAGATGAGAATTTGTGGAGC+AGG | 0.472195 | 5.1:-74009361 | MS.gene062294:intron |
| TAGGATTGTGCAAAAGCCCC+TGG | 0.477867 | 5.1:+74007415 | None:intergenic |
| AGAAAGTGAGGGTAGGAACT+TGG | 0.478713 | 5.1:+74007704 | None:intergenic |
| GAACAACAAGAGAAGCAATT+GGG | 0.490289 | 5.1:-74006427 | MS.gene062294:CDS |
| CATGGATTCAACCATTCCTC+AGG | 0.492517 | 5.1:-74007562 | MS.gene062294:CDS |
| GTGGGAACACAGTACAGATC+TGG | 0.492891 | 5.1:-74006499 | MS.gene062294:CDS |
| GGTGCTGGTATATCGTCATC+TGG | 0.500288 | 5.1:+74007537 | None:intergenic |
| AAGGATGCAATGATCCAATT+CGG | 0.509233 | 5.1:-74006291 | MS.gene062294:CDS |
| TCCTACTACGCCAAATCGAC+AGG | 0.516001 | 5.1:-74007277 | MS.gene062294:intron |
| TTCAAGCAATCTGCTGCTAA+AGG | 0.517342 | 5.1:-74006310 | MS.gene062294:CDS |
| TTGTTGAAGATGAGAATTTG+TGG | 0.519052 | 5.1:-74009367 | None:intergenic |
| TGCAAGGTCATCGGAGAGCA+TGG | 0.519772 | 5.1:-74007580 | MS.gene062294:CDS |
| ACAGTAAAATGGGGACGGGT+TGG | 0.522086 | 5.1:+74007648 | None:intergenic |
| AAAGCAGCAAACTGCTGACC+TGG | 0.522845 | 5.1:+74007516 | None:intergenic |
| AACAAACACTAGCAAGGAGC+TGG | 0.528081 | 5.1:+74007755 | None:intergenic |
| GAACACACATCTTCATAAGT+AGG | 0.536289 | 5.1:+74007396 | None:intergenic |
| AACTTGGATTTGGCAGTGCA+AGG | 0.536639 | 5.1:-74007596 | MS.gene062294:CDS |
| AATGATCCAATTCGGTGCTA+TGG | 0.541844 | 5.1:-74006283 | MS.gene062294:CDS |
| GGTTACAGTAAAATGGGGAC+GGG | 0.546721 | 5.1:+74007644 | None:intergenic |
| GACAGAAAATCTAGAAAGTG+AGG | 0.547056 | 5.1:+74007692 | None:intergenic |
| ACCTCTGTCTTACTAACTCC+AGG | 0.548827 | 5.1:+74007447 | None:intergenic |
| AACAAGAGAAGCAATTGGGC+AGG | 0.550479 | 5.1:-74006423 | MS.gene062294:CDS |
| GCAAACTGCTGACCTGGTGC+TGG | 0.552206 | 5.1:+74007522 | None:intergenic |
| GTCATCTGGTCCCTGAGGAA+TGG | 0.556094 | 5.1:+74007551 | None:intergenic |
| GCCCTGTAGAACTTCTTGGC+AGG | 0.556183 | 5.1:+74006379 | None:intergenic |
| GGAGTTAGTAAGACAGAGGT+TGG | 0.557076 | 5.1:-74007444 | MS.gene062294:CDS |
| CACTAGCAAGGAGCTGGACG+TGG | 0.557263 | 5.1:+74007761 | None:intergenic |
| ATTTGGCAGTGCAAGGTCAT+CGG | 0.557290 | 5.1:-74007589 | MS.gene062294:CDS |
| ACAGAGGTTGGTTACACCCA+GGG | 0.566736 | 5.1:-74007432 | MS.gene062294:CDS |
| CGTATCAAGCAGATTCTCAA+AGG | 0.580362 | 5.1:+74007317 | None:intergenic |
| CATCAACAGTACCTTGAGAA+AGG | 0.580843 | 5.1:-74006346 | MS.gene062294:CDS |
| TGGTTACAGTAAAATGGGGA+CGG | 0.587074 | 5.1:+74007643 | None:intergenic |
| CAAGAAGTTCTACAGGGCTG+AGG | 0.588571 | 5.1:-74006374 | MS.gene062294:CDS |
| GTGTTGAATTAGTCTTCCAG+AGG | 0.595505 | 5.1:-74007473 | MS.gene062294:CDS |
| TTGTTCAGAAGGTTCATGGA+GGG | 0.602277 | 5.1:+74007618 | None:intergenic |
| CGAATCGACCACCTTTCTCA+AGG | 0.605526 | 5.1:+74006335 | None:intergenic |
| AGGATTGTGCAAAAGCCCCT+GGG | 0.609672 | 5.1:+74007416 | None:intergenic |
| AAACCACAATGAGGTTGTAA+GGG | 0.613260 | 5.1:-74007364 | MS.gene062294:CDS |
| AGAAGAAACAAACACTAGCA+AGG | 0.615666 | 5.1:+74007749 | None:intergenic |
| ACAGAAAATCTAGAAAGTGA+GGG | 0.620493 | 5.1:+74007693 | None:intergenic |
| GACAGAGGTTGGTTACACCC+AGG | 0.622309 | 5.1:-74007433 | MS.gene062294:CDS |
| AAAATCTAGAAAGTGAGGGT+AGG | 0.627880 | 5.1:+74007697 | None:intergenic |
| GGACCCTTACAACCTCATTG+TGG | 0.628278 | 5.1:+74007361 | None:intergenic |
| TGTTGAATTAGTCTTCCAGA+GGG | 0.628480 | 5.1:-74007472 | MS.gene062294:CDS |
| TCCTGCCAAGAAGTTCTACA+GGG | 0.646626 | 5.1:-74006380 | MS.gene062294:CDS |
| ATGGATTCAACCATTCCTCA+GGG | 0.661571 | 5.1:-74007561 | MS.gene062294:CDS |
| CAACAGTACCTTGAGAAAGG+TGG | 0.667397 | 5.1:-74006343 | MS.gene062294:CDS |
| CGGGTTGGTGAAAACAAGCA+AGG | 0.672554 | 5.1:+74007663 | None:intergenic |
| CAGAGGTTGGTTACACCCAG+GGG | 0.676119 | 5.1:-74007431 | MS.gene062294:CDS |
| GATGACGATATACCAGCACC+AGG | 0.678617 | 5.1:-74007534 | MS.gene062294:CDS |
| GCCTGGAGTTAGTAAGACAG+AGG | 0.689093 | 5.1:-74007448 | MS.gene062294:CDS |
| TATGTGACAGGGGAATGATG+TGG | 0.690238 | 5.1:-74006518 | MS.gene062294:intron |
| ATGTGACAGGGGAATGATGT+GGG | 0.696486 | 5.1:-74006517 | MS.gene062294:intron |
| ATATCGTCATCTGGTCCCTG+AGG | 0.697908 | 5.1:+74007546 | None:intergenic |
| TTTGTTCAGAAGGTTCATGG+AGG | 0.703199 | 5.1:+74007617 | None:intergenic |
| GGCTTGGTTACAGTAAAATG+GGG | 0.703897 | 5.1:+74007639 | None:intergenic |
| AGGGACCACAAACCACAATG+AGG | 0.713909 | 5.1:-74007373 | MS.gene062294:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr5.1:74006595-74006614 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAAAGGAA+TGG | + | chr5.1:74006591-74006610 | None:intergenic | 10.0% |
| !! | AAATACTGTTAAAAAACATA+AGG | + | chr5.1:74007746-74007765 | None:intergenic | 15.0% |
| !! | AAATTAGTGTTTAATGATAA+TGG | - | chr5.1:74007305-74007324 | MS.gene062294:CDS | 15.0% |
| !! | AATACTGTTAAAAAACATAA+GGG | + | chr5.1:74007745-74007764 | None:intergenic | 15.0% |
| !! | TGTGAATTTAATAACAAATA+AGG | + | chr5.1:74006694-74006713 | None:intergenic | 15.0% |
| !!! | ATGATTATAATTTCTAGATA+AGG | - | chr5.1:74007804-74007823 | MS.gene062294:intron | 15.0% |
| !!! | TATATTGATAATAATAACAG+AGG | - | chr5.1:74007167-74007186 | MS.gene062294:intron | 15.0% |
| !!! | TGATTATAATTTCTAGATAA+GGG | - | chr5.1:74007805-74007824 | MS.gene062294:intron | 15.0% |
| !!! | TTTTAACAGTATTTTGAAAA+TGG | - | chr5.1:74007752-74007771 | MS.gene062294:CDS | 15.0% |
| !! | AAAAAAAAAAAAAGGAATGG+AGG | + | chr5.1:74006588-74006607 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAGGAATGGA+GGG | + | chr5.1:74006587-74006606 | None:intergenic | 20.0% |
| !! | AAATATAGTGAAAATTGAAC+AGG | + | chr5.1:74006393-74006412 | None:intergenic | 20.0% |
| !! | AGAATGCATTTATACATAAA+AGG | + | chr5.1:74006984-74007003 | None:intergenic | 20.0% |
| !! | ATGCATTAGAAATTTATAGA+TGG | - | chr5.1:74007075-74007094 | MS.gene062294:intron | 20.0% |
| !! | CACTAAAAAAACTAAAAACA+AGG | + | chr5.1:74006367-74006386 | None:intergenic | 20.0% |
| !! | GAATGCATTTATACATAAAA+GGG | + | chr5.1:74006983-74007002 | None:intergenic | 20.0% |
| !! | TATAAGCTAGACAATATAAA+TGG | + | chr5.1:74006525-74006544 | None:intergenic | 20.0% |
| !! | TCAAAAATGAACATTTAAGA+TGG | + | chr5.1:74007664-74007683 | None:intergenic | 20.0% |
| !! | TGAATTGTAGAAACATAAAA+GGG | + | chr5.1:74006333-74006352 | None:intergenic | 20.0% |
| !! | TTATAAACAAACGAACAATT+CGG | + | chr5.1:74008392-74008411 | None:intergenic | 20.0% |
| !!! | AACTCTTTTACTTTGATAAT+AGG | - | chr5.1:74007637-74007656 | MS.gene062294:CDS | 20.0% |
| !!! | AAGATTTAGGACTAATTTAA+GGG | + | chr5.1:74006561-74006580 | None:intergenic | 20.0% |
| !!! | AATTTACTAAAAGTACATGT+TGG | + | chr5.1:74008734-74008753 | None:intergenic | 20.0% |
| !!! | ACAATTGATAGTATTGATAA+AGG | - | chr5.1:74007027-74007046 | MS.gene062294:intron | 20.0% |
| !!! | ACATGTACTTTTAGTAAATT+TGG | - | chr5.1:74008734-74008753 | MS.gene062294:intron | 20.0% |
| !!! | AGTATAAAACCATTTTGATA+TGG | - | chr5.1:74008846-74008865 | MS.gene062294:intron | 20.0% |
| !!! | CAATTGATAGTATTGATAAA+GGG | - | chr5.1:74007028-74007047 | MS.gene062294:intron | 20.0% |
| !!! | CATGTACTTTTAGTAAATTT+GGG | - | chr5.1:74008735-74008754 | MS.gene062294:intron | 20.0% |
| !!! | TAAGATTTAGGACTAATTTA+AGG | + | chr5.1:74006562-74006581 | None:intergenic | 20.0% |
| !!! | TATTTTTCATTCAGTTTTCT+TGG | - | chr5.1:74007703-74007722 | MS.gene062294:CDS | 20.0% |
| !!! | TGTAAATGGTCTTATAATTA+GGG | - | chr5.1:74007125-74007144 | MS.gene062294:intron | 20.0% |
| !!! | TTGTAAATGGTCTTATAATT+AGG | - | chr5.1:74007124-74007143 | MS.gene062294:intron | 20.0% |
| !!! | TTTTTTTATGTTTTAGCTCT+TGG | - | chr5.1:74006609-74006628 | MS.gene062294:intron | 20.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | - | chr5.1:74006838-74006857 | MS.gene062294:intron | 25.0% |
| ! | ACAACTGCTTTAATAGTTTA+TGG | - | chr5.1:74006732-74006751 | MS.gene062294:intron | 25.0% |
| ! | ATCAAAATGATTAACATTGG+AGG | + | chr5.1:74008592-74008611 | None:intergenic | 25.0% |
| ! | ATTTCCAATATGAGAATCAA+AGG | - | chr5.1:74007369-74007388 | MS.gene062294:CDS | 25.0% |
| ! | ATTTCCTTTGATTCTCATAT+TGG | + | chr5.1:74007376-74007395 | None:intergenic | 25.0% |
| ! | CACTAAAACATCAAAAGTTA+TGG | - | chr5.1:74006797-74006816 | MS.gene062294:intron | 25.0% |
| ! | CTATACATGTATAGAAGAAA+TGG | - | chr5.1:74007233-74007252 | MS.gene062294:intron | 25.0% |
| ! | CTGAATTGTAGAAACATAAA+AGG | + | chr5.1:74006334-74006353 | None:intergenic | 25.0% |
| ! | GACCATGAATATCATTAATT+AGG | - | chr5.1:74006423-74006442 | MS.gene062294:CDS | 25.0% |
| ! | GAGTAGTTTACAAAAATTAC+AGG | - | chr5.1:74006899-74006918 | MS.gene062294:intron | 25.0% |
| ! | GCTATCAAAATGATTAACAT+TGG | + | chr5.1:74008595-74008614 | None:intergenic | 25.0% |
| ! | GTAAACTACTCTCATATTAA+GGG | + | chr5.1:74006890-74006909 | None:intergenic | 25.0% |
| ! | TACAGTATCAACAAACAAAA+GGG | + | chr5.1:74007616-74007635 | None:intergenic | 25.0% |
| ! | TAGATTACTCCATATCAAAA+TGG | + | chr5.1:74008858-74008877 | None:intergenic | 25.0% |
| ! | TATAGATGGTCTTCTATTTA+AGG | - | chr5.1:74007089-74007108 | MS.gene062294:intron | 25.0% |
| ! | TATGAGAATCAAAGGAAATA+AGG | - | chr5.1:74007377-74007396 | MS.gene062294:CDS | 25.0% |
| ! | TGTAAACTACTCTCATATTA+AGG | + | chr5.1:74006891-74006910 | None:intergenic | 25.0% |
| ! | TTACAGTATCAACAAACAAA+AGG | + | chr5.1:74007617-74007636 | None:intergenic | 25.0% |
| ! | TTGAACAGAAAAGAAACAAA+GGG | + | chr5.1:74008908-74008927 | None:intergenic | 25.0% |
| !! | ATTTTCATACCTAAACATCT+AGG | - | chr5.1:74007465-74007484 | MS.gene062294:CDS | 25.0% |
| !!! | CTCTAAAACATCAAAAGAAA+AGG | - | chr5.1:74006833-74006852 | MS.gene062294:intron | 25.0% |
| !!! | GACAAAGACTTTTTTGTAAA+TGG | - | chr5.1:74007111-74007130 | MS.gene062294:intron | 25.0% |
| ACAAGACAAAATGTTAGGTA+AGG | + | chr5.1:74008885-74008904 | None:intergenic | 30.0% | |
| ACAGAAAATCTAGAAAGTGA+GGG | + | chr5.1:74007947-74007966 | None:intergenic | 30.0% | |
| ATCAAAAGAAAAGGAATGGA+GGG | - | chr5.1:74006842-74006861 | MS.gene062294:intron | 30.0% | |
| ATTCACATGTGATAAACCAA+AGG | - | chr5.1:74006707-74006726 | MS.gene062294:intron | 30.0% | |
| ATTGTATCAATATGACAGCA+AGG | + | chr5.1:74006449-74006468 | None:intergenic | 30.0% | |
| CTTGAACAGAAAAGAAACAA+AGG | + | chr5.1:74008909-74008928 | None:intergenic | 30.0% | |
| GAAAATAGCTAAAGAGTCTT+TGG | - | chr5.1:74009188-74009207 | MS.gene062294:intron | 30.0% | |
| GAATAATAAGTCTAGACTTG+TGG | - | chr5.1:74008497-74008516 | MS.gene062294:intron | 30.0% | |
| GGCCTAATTAATGATATTCA+TGG | + | chr5.1:74006428-74006447 | None:intergenic | 30.0% | |
| ! | GTATTGATAAAGGGTATAGT+TGG | - | chr5.1:74007037-74007056 | MS.gene062294:intron | 30.0% |
| ! | TCTCATATTAAGGGAGTATA+TGG | + | chr5.1:74006881-74006900 | None:intergenic | 30.0% |
| ! | TTTATGGTGTTTTCCAACAA+GGG | - | chr5.1:74006748-74006767 | MS.gene062294:intron | 30.0% |
| !! | AATGGCTCTTATGTTTTTGA+AGG | - | chr5.1:74007770-74007789 | MS.gene062294:CDS | 30.0% |
| !! | AATGGTCTTATAATTAGGGA+AGG | - | chr5.1:74007129-74007148 | MS.gene062294:intron | 30.0% |
| !! | ACAAGACAATCATTTTTCCT+GGG | + | chr5.1:74008773-74008792 | None:intergenic | 30.0% |
| !! | ATGGCTCTTATGTTTTTGAA+GGG | - | chr5.1:74007771-74007790 | MS.gene062294:CDS | 30.0% |
| AAAATCTAGAAAGTGAGGGT+AGG | + | chr5.1:74007943-74007962 | None:intergenic | 35.0% | |
| AAACCACAATGAGGTTGTAA+GGG | - | chr5.1:74008273-74008292 | MS.gene062294:intron | 35.0% | |
| AAGGATGCAATGATCCAATT+CGG | - | chr5.1:74009346-74009365 | MS.gene062294:intron | 35.0% | |
| AAGGGACAAGACAAAATGTT+AGG | + | chr5.1:74008890-74008909 | None:intergenic | 35.0% | |
| ACTAAGTAAGTACATGACAC+TGG | + | chr5.1:74007539-74007558 | None:intergenic | 35.0% | |
| ACTCATAGTTCATGTTTAGG+AGG | - | chr5.1:74007342-74007361 | MS.gene062294:CDS | 35.0% | |
| ACTTATGAAGATGTGTGTTC+AGG | - | chr5.1:74008244-74008263 | MS.gene062294:intron | 35.0% | |
| AGAAGAAACAAACACTAGCA+AGG | + | chr5.1:74007891-74007910 | None:intergenic | 35.0% | |
| AGCTTAGTAATTGTGACATC+TGG | - | chr5.1:74009089-74009108 | MS.gene062294:intron | 35.0% | |
| AGGAATGAACATGCATGATT+AGG | - | chr5.1:74007397-74007416 | MS.gene062294:CDS | 35.0% | |
| ATGAACCTTCTGAACAAACT+TGG | - | chr5.1:74008025-74008044 | MS.gene062294:intron | 35.0% | |
| ATTAAAGCAGTTGTGACCTT+TGG | + | chr5.1:74006726-74006745 | None:intergenic | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | - | chr5.1:74006841-74006860 | MS.gene062294:intron | 35.0% | |
| CTCATAGTTCATGTTTAGGA+GGG | - | chr5.1:74007343-74007362 | MS.gene062294:CDS | 35.0% | |
| CTTATGAAGATGTGTGTTCA+GGG | - | chr5.1:74008245-74008264 | MS.gene062294:intron | 35.0% | |
| CTTCTGAACAAACTTGGATT+TGG | - | chr5.1:74008031-74008050 | MS.gene062294:intron | 35.0% | |
| GAACAACAAGAGAAGCAATT+GGG | - | chr5.1:74009210-74009229 | MS.gene062294:intron | 35.0% | |
| GAACACACATCTTCATAAGT+AGG | + | chr5.1:74008244-74008263 | None:intergenic | 35.0% | |
| GAATGAACATGCATGATTAG+GGG | - | chr5.1:74007399-74007418 | MS.gene062294:CDS | 35.0% | |
| GACAGAAAATCTAGAAAGTG+AGG | + | chr5.1:74007948-74007967 | None:intergenic | 35.0% | |
| GCAACTCATAGTTCATGTTT+AGG | - | chr5.1:74007339-74007358 | MS.gene062294:CDS | 35.0% | |
| GGAATGAACATGCATGATTA+GGG | - | chr5.1:74007398-74007417 | MS.gene062294:CDS | 35.0% | |
| GTCTTATAATTAGGGAAGGA+GGG | - | chr5.1:74007133-74007152 | MS.gene062294:intron | 35.0% | |
| TACTAAGCTCTTACCATTCA+TGG | + | chr5.1:74009078-74009097 | None:intergenic | 35.0% | |
| TGATTTCCACTTTCCATGAA+TGG | - | chr5.1:74009062-74009081 | MS.gene062294:intron | 35.0% | |
| TTATTCAGATCAGCAAAGTC+AGG | + | chr5.1:74008483-74008502 | None:intergenic | 35.0% | |
| TTTCTCAAGTTTACCCTTGT+TGG | + | chr5.1:74006764-74006783 | None:intergenic | 35.0% | |
| ! | AAGTTTGTTCAGAAGGTTCA+TGG | + | chr5.1:74008026-74008045 | None:intergenic | 35.0% |
| ! | ATTCTCAAAGGCACATTGTT+TGG | + | chr5.1:74008311-74008330 | None:intergenic | 35.0% |
| ! | CAAATCCAAGTTTGTTCAGA+AGG | + | chr5.1:74008033-74008052 | None:intergenic | 35.0% |
| ! | CACATTGTTTGGGATCATAT+TGG | + | chr5.1:74008300-74008319 | None:intergenic | 35.0% |
| ! | GTTTATGGTGTTTTCCAACA+AGG | - | chr5.1:74006747-74006766 | MS.gene062294:intron | 35.0% |
| ! | TTCTCAAAGGCACATTGTTT+GGG | + | chr5.1:74008310-74008329 | None:intergenic | 35.0% |
| ! | TTCTTTTCTGTTCAAGACTG+TGG | - | chr5.1:74008913-74008932 | MS.gene062294:intron | 35.0% |
| ! | TTGTGGATTGTCAACATTGA+TGG | - | chr5.1:74008514-74008533 | MS.gene062294:intron | 35.0% |
| !! | GACAAGACAATCATTTTTCC+TGG | + | chr5.1:74008774-74008793 | None:intergenic | 35.0% |
| !! | TGTTGAATTAGTCTTCCAGA+GGG | - | chr5.1:74008165-74008184 | MS.gene062294:intron | 35.0% |
| !! | TTAGCTATTTTCTCTTGCTC+AGG | + | chr5.1:74009180-74009199 | None:intergenic | 35.0% |
| !!! | ATGAGCCTCTGTTTTTTGAA+CGG | + | chr5.1:74007195-74007214 | None:intergenic | 35.0% |
| !!! | GAGTTCTTTTTTGTCTCAAG+TGG | - | chr5.1:74008452-74008471 | MS.gene062294:intron | 35.0% |
| AAAGAAGAAACGGCAAAACC+TGG | + | chr5.1:74007582-74007601 | None:intergenic | 40.0% | |
| AGAATCTGCTTGATACGTTC+TGG | - | chr5.1:74008326-74008345 | MS.gene062294:intron | 40.0% | |
| ATGGATTCAACCATTCCTCA+GGG | - | chr5.1:74008076-74008095 | MS.gene062294:intron | 40.0% | |
| CAAACCACAATGAGGTTGTA+AGG | - | chr5.1:74008272-74008291 | MS.gene062294:intron | 40.0% | |
| CAATTCCTGCCTAGATGTTT+AGG | + | chr5.1:74007477-74007496 | None:intergenic | 40.0% | |
| CATCAACAGTACCTTGAGAA+AGG | - | chr5.1:74009291-74009310 | MS.gene062294:intron | 40.0% | |
| CGTATCAAGCAGATTCTCAA+AGG | + | chr5.1:74008323-74008342 | None:intergenic | 40.0% | |
| CTCTTACCATTCATGGAAAG+TGG | + | chr5.1:74009071-74009090 | None:intergenic | 40.0% | |
| CTGGATCTTTGTATGTGACA+GGG | - | chr5.1:74009108-74009127 | MS.gene062294:intron | 40.0% | |
| GAACTCAATTCGCAAACAAG+AGG | + | chr5.1:74008438-74008457 | None:intergenic | 40.0% | |
| GAATGGAGGGAGTAAGATTT+AGG | + | chr5.1:74006574-74006593 | None:intergenic | 40.0% | |
| GCTGCACTCAAAAGAAGAAA+CGG | + | chr5.1:74007592-74007611 | None:intergenic | 40.0% | |
| GGAACAACAAGAGAAGCAAT+TGG | - | chr5.1:74009209-74009228 | MS.gene062294:intron | 40.0% | |
| TACAACCTCATTGTGGTTTG+TGG | + | chr5.1:74008272-74008291 | None:intergenic | 40.0% | |
| TCATACCTAAACATCTAGGC+AGG | - | chr5.1:74007469-74007488 | MS.gene062294:CDS | 40.0% | |
| TCTGGATCTTTGTATGTGAC+AGG | - | chr5.1:74009107-74009126 | MS.gene062294:intron | 40.0% | |
| TCTTGTCACTGAGTATGTGA+TGG | - | chr5.1:74008787-74008806 | MS.gene062294:intron | 40.0% | |
| TGGATCTTTGTATGTGACAG+GGG | - | chr5.1:74009109-74009128 | MS.gene062294:intron | 40.0% | |
| TGGTTACAGTAAAATGGGGA+CGG | + | chr5.1:74007997-74008016 | None:intergenic | 40.0% | |
| TTCAAGCAATCTGCTGCTAA+AGG | - | chr5.1:74009327-74009346 | MS.gene062294:intron | 40.0% | |
| TTGGGTCAAATCAAATTCCC+AGG | - | chr5.1:74008753-74008772 | MS.gene062294:intron | 40.0% | |
| TTGTTCAGAAGGTTCATGGA+GGG | + | chr5.1:74008022-74008041 | None:intergenic | 40.0% | |
| TTTGTTCAGAAGGTTCATGG+AGG | + | chr5.1:74008023-74008042 | None:intergenic | 40.0% | |
| ! | AGCTCTTGGCACAAGTTTTA+AGG | - | chr5.1:74006623-74006642 | MS.gene062294:intron | 40.0% |
| ! | AGGGCTTGGTTACAGTAAAA+TGG | + | chr5.1:74008003-74008022 | None:intergenic | 40.0% |
| ! | GGCTTGGTTACAGTAAAATG+GGG | + | chr5.1:74008001-74008020 | None:intergenic | 40.0% |
| ! | GGGCTTGGTTACAGTAAAAT+GGG | + | chr5.1:74008002-74008021 | None:intergenic | 40.0% |
| ! | GGTCTTATAATTAGGGAAGG+AGG | - | chr5.1:74007132-74007151 | MS.gene062294:intron | 40.0% |
| ! | TCGGTATATACCTGTCGATT+TGG | + | chr5.1:74008373-74008392 | None:intergenic | 40.0% |
| !! | AATGATCCAATTCGGTGCTA+TGG | - | chr5.1:74009354-74009373 | MS.gene062294:intron | 40.0% |
| !! | CTTTCTCAAGGTACTGTTGA+TGG | + | chr5.1:74009293-74009312 | None:intergenic | 40.0% |
| !! | GTGTTGAATTAGTCTTCCAG+AGG | - | chr5.1:74008164-74008183 | MS.gene062294:intron | 40.0% |
| AAACATAAGGGCCACCAAGT+TGG | + | chr5.1:74007733-74007752 | None:intergenic | 45.0% | |
| AACAAACACTAGCAAGGAGC+TGG | + | chr5.1:74007885-74007904 | None:intergenic | 45.0% | |
| AACAAGAGAAGCAATTGGGC+AGG | - | chr5.1:74009214-74009233 | MS.gene062294:intron | 45.0% | |
| AACATAAGGGCCACCAAGTT+GGG | + | chr5.1:74007732-74007751 | None:intergenic | 45.0% | |
| AACTTGGATTTGGCAGTGCA+AGG | - | chr5.1:74008041-74008060 | MS.gene062294:intron | 45.0% | |
| ACCTCTGTCTTACTAACTCC+AGG | + | chr5.1:74008193-74008212 | None:intergenic | 45.0% | |
| AGAAACGGCAAAACCTGGAA+AGG | + | chr5.1:74007577-74007596 | None:intergenic | 45.0% | |
| AGAAAGTGAGGGTAGGAACT+TGG | + | chr5.1:74007936-74007955 | None:intergenic | 45.0% | |
| AGGCTCCGTTCAAAAAACAG+AGG | - | chr5.1:74007187-74007206 | MS.gene062294:intron | 45.0% | |
| ATGTGACAGGGGAATGATGT+GGG | - | chr5.1:74009120-74009139 | MS.gene062294:intron | 45.0% | |
| ATTTGGCAGTGCAAGGTCAT+CGG | - | chr5.1:74008048-74008067 | MS.gene062294:intron | 45.0% | |
| CAACAGTACCTTGAGAAAGG+TGG | - | chr5.1:74009294-74009313 | MS.gene062294:intron | 45.0% | |
| CATGGATTCAACCATTCCTC+AGG | - | chr5.1:74008075-74008094 | MS.gene062294:intron | 45.0% | |
| CTTGAGAAAGGTGGTCGATT+CGG | - | chr5.1:74009303-74009322 | MS.gene062294:intron | 45.0% | |
| GAGAATTTGTGGAGCAGGTA+TGG | - | chr5.1:74006281-74006300 | MS.gene062294:CDS | 45.0% | |
| GGAGTTAGTAAGACAGAGGT+TGG | - | chr5.1:74008193-74008212 | MS.gene062294:intron | 45.0% | |
| GGTTACAGTAAAATGGGGAC+GGG | + | chr5.1:74007996-74008015 | None:intergenic | 45.0% | |
| TATGTGACAGGGGAATGATG+TGG | - | chr5.1:74009119-74009138 | MS.gene062294:intron | 45.0% | |
| TCCTGCCAAGAAGTTCTACA+GGG | - | chr5.1:74009257-74009276 | MS.gene062294:intron | 45.0% | |
| TTCCTGCCAAGAAGTTCTAC+AGG | - | chr5.1:74009256-74009275 | MS.gene062294:intron | 45.0% | |
| ! | GTTTTCTTGGCATCCCAACT+TGG | - | chr5.1:74007716-74007735 | MS.gene062294:CDS | 45.0% |
| ! | TGAGGGTAGGAACTTGGTTT+TGG | + | chr5.1:74007930-74007949 | None:intergenic | 45.0% |
| !!! | GTCAGCAGTTTGCTGCTTTT+GGG | - | chr5.1:74008125-74008144 | MS.gene062294:intron | 45.0% |
| !!! | TCAGCAGTTTGCTGCTTTTG+GGG | - | chr5.1:74008126-74008145 | MS.gene062294:intron | 45.0% |
| AAAGCAGCAAACTGCTGACC+TGG | + | chr5.1:74008124-74008143 | None:intergenic | 50.0% | |
| ACAGTAAAATGGGGACGGGT+TGG | + | chr5.1:74007992-74008011 | None:intergenic | 50.0% | |
| AGGATTGTGCAAAAGCCCCT+GGG | + | chr5.1:74008224-74008243 | None:intergenic | 50.0% | |
| AGGGACCACAAACCACAATG+AGG | - | chr5.1:74008264-74008283 | MS.gene062294:intron | 50.0% | |
| ATATCGTCATCTGGTCCCTG+AGG | + | chr5.1:74008094-74008113 | None:intergenic | 50.0% | |
| CAAGAAGTTCTACAGGGCTG+AGG | - | chr5.1:74009263-74009282 | MS.gene062294:intron | 50.0% | |
| CGAATCGACCACCTTTCTCA+AGG | + | chr5.1:74009305-74009324 | None:intergenic | 50.0% | |
| CTCAGCCCTGTAGAACTTCT+TGG | + | chr5.1:74009265-74009284 | None:intergenic | 50.0% | |
| GATGACGATATACCAGCACC+AGG | - | chr5.1:74008103-74008122 | MS.gene062294:intron | 50.0% | |
| GCAAAACCTGGAAAGGACTC+GGG | + | chr5.1:74007570-74007589 | None:intergenic | 50.0% | |
| GCCTGGAGTTAGTAAGACAG+AGG | - | chr5.1:74008189-74008208 | MS.gene062294:intron | 50.0% | |
| GGACCCTTACAACCTCATTG+TGG | + | chr5.1:74008279-74008298 | None:intergenic | 50.0% | |
| GGCAAAACCTGGAAAGGACT+CGG | + | chr5.1:74007571-74007590 | None:intergenic | 50.0% | |
| GTGGGAACACAGTACAGATC+TGG | - | chr5.1:74009138-74009157 | MS.gene062294:intron | 50.0% | |
| TAGGATTGTGCAAAAGCCCC+TGG | + | chr5.1:74008225-74008244 | None:intergenic | 50.0% | |
| TCCTACTACGCCAAATCGAC+AGG | - | chr5.1:74008360-74008379 | MS.gene062294:intron | 50.0% | |
| TTCTTGGCATCCCAACTTGG+TGG | - | chr5.1:74007719-74007738 | MS.gene062294:CDS | 50.0% | |
| TTGATTCCCGAGTCCTTTCC+AGG | - | chr5.1:74007561-74007580 | MS.gene062294:CDS | 50.0% | |
| ! | ACAGAGGTTGGTTACACCCA+GGG | - | chr5.1:74008205-74008224 | MS.gene062294:intron | 50.0% |
| !! | ACCTGTCGATTTGGCGTAGT+AGG | + | chr5.1:74008364-74008383 | None:intergenic | 50.0% |
| !! | CGGGTTGGTGAAAACAAGCA+AGG | + | chr5.1:74007977-74007996 | None:intergenic | 50.0% |
| !! | GGTGCTGGTATATCGTCATC+TGG | + | chr5.1:74008103-74008122 | None:intergenic | 50.0% |
| !!! | GAACTTGGTTTTGGCAGGAG+TGG | + | chr5.1:74007921-74007940 | None:intergenic | 50.0% |
| !!! | GGTAGGAACTTGGTTTTGGC+AGG | + | chr5.1:74007926-74007945 | None:intergenic | 50.0% |
| !!! | GGTCAGCAGTTTGCTGCTTT+TGG | - | chr5.1:74008124-74008143 | MS.gene062294:intron | 50.0% |
| CAGAAGGTTCATGGAGGGCT+TGG | + | chr5.1:74008017-74008036 | None:intergenic | 55.0% | |
| GCCCTGTAGAACTTCTTGGC+AGG | + | chr5.1:74009261-74009280 | None:intergenic | 55.0% | |
| GTCATCTGGTCCCTGAGGAA+TGG | + | chr5.1:74008089-74008108 | None:intergenic | 55.0% | |
| TACTAACTCCAGGCACCCTC+TGG | + | chr5.1:74008183-74008202 | None:intergenic | 55.0% | |
| TGCAAGGTCATCGGAGAGCA+TGG | - | chr5.1:74008057-74008076 | MS.gene062294:intron | 55.0% | |
| ! | CAGAGGTTGGTTACACCCAG+GGG | - | chr5.1:74008206-74008225 | MS.gene062294:intron | 55.0% |
| ! | GACAGAGGTTGGTTACACCC+AGG | - | chr5.1:74008204-74008223 | MS.gene062294:intron | 55.0% |
| !! | GGTTTTGGCAGGAGTGGAGA+AGG | + | chr5.1:74007915-74007934 | None:intergenic | 55.0% |
| !! | TTAGTCTTCCAGAGGGTGCC+TGG | - | chr5.1:74008172-74008191 | MS.gene062294:intron | 55.0% |
| !!! | CAGTTTGCTGCTTTTGGGGC+TGG | - | chr5.1:74008130-74008149 | MS.gene062294:intron | 55.0% |
| !!! | TTTTGGGGCTGGCTGCTTCT+GGG | - | chr5.1:74008141-74008160 | MS.gene062294:intron | 55.0% |
| CACTAGCAAGGAGCTGGACG+TGG | + | chr5.1:74007879-74007898 | None:intergenic | 60.0% | |
| GCAAACTGCTGACCTGGTGC+TGG | + | chr5.1:74008118-74008137 | None:intergenic | 60.0% | |
| !! | GGAGCTGGACGTGGTGCTAT+AGG | + | chr5.1:74007870-74007889 | None:intergenic | 60.0% |
| !! | TTTGGGGCTGGCTGCTTCTG+GGG | - | chr5.1:74008142-74008161 | MS.gene062294:intron | 60.0% |
| !!! | CTTTTGGGGCTGGCTGCTTC+TGG | - | chr5.1:74008140-74008159 | MS.gene062294:intron | 60.0% |
| !! | CGTGGTGCTATAGGCGCTGC+TGG | + | chr5.1:74007861-74007880 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 74006279 | 74009380 | 74006279 | ID=MS.gene062294 |
| chr5.1 | mRNA | 74006279 | 74009380 | 74006279 | ID=MS.gene062294.t1;Parent=MS.gene062294 |
| chr5.1 | exon | 74009362 | 74009380 | 74009362 | ID=MS.gene062294.t1.exon1;Parent=MS.gene062294.t1 |
| chr5.1 | CDS | 74009362 | 74009380 | 74009362 | ID=cds.MS.gene062294.t1;Parent=MS.gene062294.t1 |
| chr5.1 | exon | 74007278 | 74007804 | 74007278 | ID=MS.gene062294.t1.exon2;Parent=MS.gene062294.t1 |
| chr5.1 | CDS | 74007278 | 74007804 | 74007278 | ID=cds.MS.gene062294.t1;Parent=MS.gene062294.t1 |
| chr5.1 | exon | 74006279 | 74006530 | 74006279 | ID=MS.gene062294.t1.exon3;Parent=MS.gene062294.t1 |
| chr5.1 | CDS | 74006279 | 74006530 | 74006279 | ID=cds.MS.gene062294.t1;Parent=MS.gene062294.t1 |
| Gene Sequence |
| Protein sequence |
