AlfalfaGEDB | MS.gene80239

M. sativa cultivar XinJiangDaYe / MS.gene80239

KEGG: K02109
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009165 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015672 GO:0015985 GO:0015986 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0022857 GO:0022890 GO:0032991 GO:0033177 GO:0034220 GO:0034641 GO:0034654 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0045263 GO:0046034 GO:0046390 GO:0046483 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0098655 GO:0098660 GO:0098662 GO:0098796 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
PFAM: PF00430.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80239.t1	XP_003603370.1	98.2	164	3	0	1	164	46	209	1.30E-49	206.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80239.t1	P31853	72.1	165	44	1	1	163	58	222	2.9e-26	119.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80239.t1	G7JAI2	98.2	164	3	0	1	164	46	209	9.2e-50	206.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene80239	0.810826	9.50E-51	-1.69E-46
MS.gene049171	MS.gene80239	0.941331	5.01E-101	-1.69E-46
MS.gene049173	MS.gene80239	0.845001	5.33E-59	-1.69E-46
MS.gene049181	MS.gene80239	-0.815573	8.63E-52	-1.69E-46
MS.gene049217	MS.gene80239	0.885851	5.69E-72	-1.69E-46
MS.gene049222	MS.gene80239	0.928926	1.44E-92	-1.69E-46
MS.gene049232	MS.gene80239	0.92679	2.89E-91	-1.69E-46
MS.gene049259	MS.gene80239	-0.83897	2.09E-57	-1.69E-46
MS.gene049281	MS.gene80239	-0.841601	4.31E-58	-1.69E-46
MS.gene049285	MS.gene80239	0.952943	8.10E-111	-1.69E-46
MS.gene049312	MS.gene80239	-0.807666	4.52E-50	-1.69E-46
MS.gene049320	MS.gene80239	0.956636	1.85E-114	-1.69E-46
MS.gene049396	MS.gene80239	0.80928	2.05E-50	-1.69E-46
MS.gene04939	MS.gene80239	0.83116	1.95E-55	-1.69E-46
MS.gene049483	MS.gene80239	-0.806509	7.95E-50	-1.69E-46
MS.gene049600	MS.gene80239	0.828248	9.99E-55	-1.69E-46
MS.gene049609	MS.gene80239	0.886919	2.25E-72	-1.69E-46
MS.gene049611	MS.gene80239	-0.847752	9.48E-60	-1.69E-46
MS.gene049615	MS.gene80239	0.818935	1.51E-52	-1.69E-46
MS.gene049627	MS.gene80239	0.861247	1.17E-63	-1.69E-46
MS.gene049633	MS.gene80239	0.90473	9.05E-80	-1.69E-46
MS.gene049634	MS.gene80239	-0.825282	5.10E-54	-1.69E-46
MS.gene049656	MS.gene80239	0.805359	1.39E-49	-1.69E-46
MS.gene049657	MS.gene80239	0.827527	1.49E-54	-1.69E-46
MS.gene049805	MS.gene80239	0.848216	7.06E-60	-1.69E-46
MS.gene049865	MS.gene80239	0.855212	7.34E-62	-1.69E-46
MS.gene050082	MS.gene80239	-0.819556	1.09E-52	-1.69E-46
MS.gene05010	MS.gene80239	0.948077	1.93E-106	-1.69E-46
MS.gene050163	MS.gene80239	0.92282	5.97E-89	-1.69E-46
MS.gene050165	MS.gene80239	0.923601	2.14E-89	-1.69E-46
MS.gene050170	MS.gene80239	0.931765	2.33E-94	-1.69E-46
MS.gene050216	MS.gene80239	0.885888	5.51E-72	-1.69E-46
MS.gene050323	MS.gene80239	0.937325	4.16E-98	-1.69E-46
MS.gene050333	MS.gene80239	0.905589	3.66E-80	-1.69E-46
MS.gene050338	MS.gene80239	-0.818045	2.41E-52	-1.69E-46
MS.gene050381	MS.gene80239	-0.86874	5.22E-66	-1.69E-46
MS.gene050444	MS.gene80239	0.858683	6.96E-63	-1.69E-46
MS.gene050496	MS.gene80239	0.939172	1.99E-99	-1.69E-46
MS.gene050502	MS.gene80239	0.847617	1.03E-59	-1.69E-46
MS.gene050504	MS.gene80239	0.972305	1.50E-134	-1.69E-46
MS.gene050518	MS.gene80239	0.951369	2.36E-109	-1.69E-46
MS.gene050538	MS.gene80239	0.841501	4.57E-58	-1.69E-46
MS.gene050577	MS.gene80239	0.93685	8.97E-98	-1.69E-46
MS.gene050593	MS.gene80239	0.843231	1.59E-58	-1.69E-46
MS.gene050612	MS.gene80239	0.967391	3.26E-127	-1.69E-46
MS.gene050647	MS.gene80239	-0.823339	1.46E-53	-1.69E-46
MS.gene050662	MS.gene80239	0.869648	2.65E-66	-1.69E-46
MS.gene050675	MS.gene80239	0.937936	1.54E-98	-1.69E-46
MS.gene050686	MS.gene80239	0.815448	9.20E-52	-1.69E-46
MS.gene050697	MS.gene80239	0.833453	5.29E-56	-1.69E-46
MS.gene050699	MS.gene80239	0.945052	6.27E-104	-1.69E-46
MS.gene050747	MS.gene80239	0.882379	1.09E-70	-1.69E-46
MS.gene050772	MS.gene80239	0.920347	1.44E-87	-1.69E-46
MS.gene05079	MS.gene80239	-0.812294	4.56E-51	-1.69E-46
MS.gene05080	MS.gene80239	0.896368	3.94E-76	-1.69E-46
MS.gene05081	MS.gene80239	0.822869	1.88E-53	-1.69E-46
MS.gene050832	MS.gene80239	-0.805532	1.28E-49	-1.69E-46
MS.gene050833	MS.gene80239	-0.805983	1.03E-49	-1.69E-46
MS.gene050868	MS.gene80239	0.935357	9.63E-97	-1.69E-46
MS.gene050871	MS.gene80239	0.936017	3.40E-97	-1.69E-46
MS.gene050876	MS.gene80239	0.906793	1.02E-80	-1.69E-46
MS.gene05087	MS.gene80239	0.814109	1.82E-51	-1.69E-46
MS.gene050883	MS.gene80239	-0.86256	4.65E-64	-1.69E-46
MS.gene050904	MS.gene80239	0.904407	1.27E-79	-1.69E-46
MS.gene050950	MS.gene80239	0.881635	2.04E-70	-1.69E-46
MS.gene050986	MS.gene80239	0.954041	7.20E-112	-1.69E-46
MS.gene05100	MS.gene80239	0.879145	1.58E-69	-1.69E-46
MS.gene051044	MS.gene80239	-0.83416	3.52E-56	-1.69E-46
MS.gene05104	MS.gene80239	-0.854687	1.04E-61	-1.69E-46
MS.gene051127	MS.gene80239	-0.872855	2.31E-67	-1.69E-46
MS.gene051138	MS.gene80239	-0.857545	1.52E-62	-1.69E-46
MS.gene051167	MS.gene80239	-0.810689	1.02E-50	-1.69E-46
MS.gene05118	MS.gene80239	0.811574	6.54E-51	-1.69E-46
MS.gene051228	MS.gene80239	0.815862	7.44E-52	-1.69E-46
MS.gene051268	MS.gene80239	0.889643	2.02E-73	-1.69E-46
MS.gene051317	MS.gene80239	0.922499	9.08E-89	-1.69E-46
MS.gene051336	MS.gene80239	0.805335	1.40E-49	-1.69E-46
MS.gene051364	MS.gene80239	-0.859989	2.82E-63	-1.69E-46
MS.gene051366	MS.gene80239	-0.856418	3.26E-62	-1.69E-46
MS.gene051367	MS.gene80239	-0.827515	1.50E-54	-1.69E-46
MS.gene05141	MS.gene80239	-0.826958	2.04E-54	-1.69E-46
MS.gene051422	MS.gene80239	-0.804202	2.42E-49	-1.69E-46
MS.gene051509	MS.gene80239	0.850045	2.19E-60	-1.69E-46
MS.gene051551	MS.gene80239	0.920929	6.86E-88	-1.69E-46
MS.gene051560	MS.gene80239	0.816981	4.18E-52	-1.69E-46
MS.gene051651	MS.gene80239	-0.859632	3.62E-63	-1.69E-46
MS.gene051666	MS.gene80239	0.83774	4.35E-57	-1.69E-46
MS.gene051694	MS.gene80239	0.840818	6.91E-58	-1.69E-46
MS.gene051734	MS.gene80239	0.807203	5.67E-50	-1.69E-46
MS.gene051810	MS.gene80239	0.900926	4.49E-78	-1.69E-46
MS.gene051838	MS.gene80239	0.844059	9.56E-59	-1.69E-46
MS.gene051858	MS.gene80239	0.857865	1.22E-62	-1.69E-46
MS.gene051863	MS.gene80239	-0.823021	1.73E-53	-1.69E-46
MS.gene051874	MS.gene80239	0.853948	1.70E-61	-1.69E-46
MS.gene051941	MS.gene80239	0.832533	8.95E-56	-1.69E-46
MS.gene051946	MS.gene80239	-0.843445	1.40E-58	-1.69E-46
MS.gene051949	MS.gene80239	0.859479	4.02E-63	-1.69E-46
MS.gene052066	MS.gene80239	0.851023	1.16E-60	-1.69E-46
MS.gene052129	MS.gene80239	-0.83081	2.38E-55	-1.69E-46
MS.gene052164	MS.gene80239	0.910143	2.60E-82	-1.69E-46
MS.gene052271	MS.gene80239	0.853478	2.33E-61	-1.69E-46
MS.gene052379	MS.gene80239	0.82298	1.77E-53	-1.69E-46
MS.gene052482	MS.gene80239	0.917259	6.60E-86	-1.69E-46
MS.gene052486	MS.gene80239	0.92579	1.14E-90	-1.69E-46
MS.gene052494	MS.gene80239	-0.81847	1.93E-52	-1.69E-46
MS.gene052501	MS.gene80239	0.808085	3.68E-50	-1.69E-46
MS.gene052503	MS.gene80239	0.896476	3.56E-76	-1.69E-46
MS.gene052504	MS.gene80239	0.873063	1.97E-67	-1.69E-46
MS.gene052506	MS.gene80239	0.893223	7.68E-75	-1.69E-46
MS.gene052566	MS.gene80239	-0.800623	1.32E-48	-1.69E-46
MS.gene052605	MS.gene80239	0.803027	4.24E-49	-1.69E-46
MS.gene052606	MS.gene80239	-0.807787	4.26E-50	-1.69E-46
MS.gene052615	MS.gene80239	0.879029	1.74E-69	-1.69E-46
MS.gene052805	MS.gene80239	-0.803321	3.69E-49	-1.69E-46
MS.gene052820	MS.gene80239	0.826137	3.20E-54	-1.69E-46
MS.gene052822	MS.gene80239	0.90462	1.01E-79	-1.69E-46
MS.gene052823	MS.gene80239	0.896416	3.77E-76	-1.69E-46
MS.gene052825	MS.gene80239	0.889445	2.41E-73	-1.69E-46
MS.gene052870	MS.gene80239	0.825984	3.48E-54	-1.69E-46
MS.gene052872	MS.gene80239	0.850743	1.39E-60	-1.69E-46
MS.gene052916	MS.gene80239	0.873446	1.46E-67	-1.69E-46
MS.gene052966	MS.gene80239	0.918271	1.91E-86	-1.69E-46
MS.gene052986	MS.gene80239	0.808906	2.46E-50	-1.69E-46
MS.gene052987	MS.gene80239	0.813729	2.21E-51	-1.69E-46
MS.gene053018	MS.gene80239	0.806666	7.36E-50	-1.69E-46
MS.gene053069	MS.gene80239	-0.804283	2.33E-49	-1.69E-46
MS.gene053083	MS.gene80239	-0.800877	1.17E-48	-1.69E-46
MS.gene053104	MS.gene80239	0.814838	1.26E-51	-1.69E-46
MS.gene053117	MS.gene80239	0.826029	3.39E-54	-1.69E-46
MS.gene053203	MS.gene80239	0.925105	2.88E-90	-1.69E-46
MS.gene053207	MS.gene80239	0.865048	7.83E-65	-1.69E-46
MS.gene053213	MS.gene80239	0.922367	1.08E-88	-1.69E-46
MS.gene053284	MS.gene80239	0.835846	1.32E-56	-1.69E-46
MS.gene053285	MS.gene80239	0.815362	9.61E-52	-1.69E-46
MS.gene053286	MS.gene80239	0.926762	3.00E-91	-1.69E-46
MS.gene053322	MS.gene80239	0.800826	1.20E-48	-1.69E-46
MS.gene053420	MS.gene80239	-0.878684	2.30E-69	-1.69E-46
MS.gene053421	MS.gene80239	-0.825485	4.57E-54	-1.69E-46
MS.gene053436	MS.gene80239	0.884515	1.79E-71	-1.69E-46
MS.gene053479	MS.gene80239	0.906579	1.28E-80	-1.69E-46
MS.gene053480	MS.gene80239	0.881866	1.68E-70	-1.69E-46
MS.gene053488	MS.gene80239	-0.81248	4.15E-51	-1.69E-46
MS.gene053549	MS.gene80239	-0.849363	3.39E-60	-1.69E-46
MS.gene053561	MS.gene80239	-0.846836	1.69E-59	-1.69E-46
MS.gene053574	MS.gene80239	0.909459	5.57E-82	-1.69E-46
MS.gene053626	MS.gene80239	0.874338	7.30E-68	-1.69E-46
MS.gene053632	MS.gene80239	0.885643	6.82E-72	-1.69E-46
MS.gene053633	MS.gene80239	0.871174	8.35E-67	-1.69E-46
MS.gene053824	MS.gene80239	0.90637	1.60E-80	-1.69E-46
MS.gene053887	MS.gene80239	-0.803316	3.70E-49	-1.69E-46
MS.gene053916	MS.gene80239	0.88078	4.14E-70	-1.69E-46
MS.gene054003	MS.gene80239	0.86337	2.61E-64	-1.69E-46
MS.gene054054	MS.gene80239	-0.817883	2.62E-52	-1.69E-46
MS.gene054056	MS.gene80239	-0.824767	6.75E-54	-1.69E-46
MS.gene054344	MS.gene80239	0.813731	2.21E-51	-1.69E-46
MS.gene054374	MS.gene80239	0.811269	7.62E-51	-1.69E-46
MS.gene054408	MS.gene80239	0.869266	3.52E-66	-1.69E-46
MS.gene054595	MS.gene80239	0.916986	9.20E-86	-1.69E-46
MS.gene054600	MS.gene80239	0.910524	1.70E-82	-1.69E-46
MS.gene054616	MS.gene80239	-0.83552	1.60E-56	-1.69E-46
MS.gene054638	MS.gene80239	0.802604	5.18E-49	-1.69E-46
MS.gene054642	MS.gene80239	0.928859	1.59E-92	-1.69E-46
MS.gene054706	MS.gene80239	-0.869145	3.86E-66	-1.69E-46
MS.gene054707	MS.gene80239	-0.813094	3.05E-51	-1.69E-46
MS.gene054708	MS.gene80239	-0.837255	5.79E-57	-1.69E-46
MS.gene05470	MS.gene80239	0.925096	2.91E-90	-1.69E-46
MS.gene054927	MS.gene80239	0.8266	2.48E-54	-1.69E-46
MS.gene05494	MS.gene80239	0.827159	1.82E-54	-1.69E-46
MS.gene054954	MS.gene80239	0.964901	6.48E-124	-1.69E-46
MS.gene054959	MS.gene80239	-0.831086	2.04E-55	-1.69E-46
MS.gene05505	MS.gene80239	0.826951	2.05E-54	-1.69E-46
MS.gene055124	MS.gene80239	-0.810542	1.09E-50	-1.69E-46
MS.gene055139	MS.gene80239	-0.807611	4.65E-50	-1.69E-46
MS.gene055154	MS.gene80239	-0.873545	1.35E-67	-1.69E-46
MS.gene055202	MS.gene80239	-0.825838	3.77E-54	-1.69E-46
MS.gene055206	MS.gene80239	0.861356	1.09E-63	-1.69E-46
MS.gene055212	MS.gene80239	0.82018	7.86E-53	-1.69E-46
MS.gene055224	MS.gene80239	0.873379	1.54E-67	-1.69E-46
MS.gene055251	MS.gene80239	-0.826861	2.15E-54	-1.69E-46
MS.gene055289	MS.gene80239	0.824998	5.96E-54	-1.69E-46
MS.gene055362	MS.gene80239	0.95537	3.55E-113	-1.69E-46
MS.gene055502	MS.gene80239	0.949023	2.94E-107	-1.69E-46
MS.gene055577	MS.gene80239	0.941198	6.31E-101	-1.69E-46
MS.gene055629	MS.gene80239	0.818065	2.38E-52	-1.69E-46
MS.gene055634	MS.gene80239	0.840563	8.07E-58	-1.69E-46
MS.gene055636	MS.gene80239	0.819326	1.23E-52	-1.69E-46
MS.gene055638	MS.gene80239	0.841306	5.15E-58	-1.69E-46
MS.gene055647	MS.gene80239	0.824234	9.01E-54	-1.69E-46
MS.gene055722	MS.gene80239	0.874718	5.42E-68	-1.69E-46
MS.gene055748	MS.gene80239	0.924484	6.62E-90	-1.69E-46
MS.gene055750	MS.gene80239	0.932506	7.69E-95	-1.69E-46
MS.gene055751	MS.gene80239	0.935545	7.17E-97	-1.69E-46
MS.gene055776	MS.gene80239	0.923866	1.51E-89	-1.69E-46
MS.gene055849	MS.gene80239	0.860377	2.16E-63	-1.69E-46
MS.gene05589	MS.gene80239	0.930949	7.76E-94	-1.69E-46
MS.gene05592	MS.gene80239	0.842635	2.29E-58	-1.69E-46
MS.gene055941	MS.gene80239	0.89186	2.70E-74	-1.69E-46
MS.gene055942	MS.gene80239	-0.862048	6.68E-64	-1.69E-46
MS.gene055956	MS.gene80239	-0.822812	1.94E-53	-1.69E-46
MS.gene056040	MS.gene80239	0.835962	1.24E-56	-1.69E-46
MS.gene056046	MS.gene80239	0.884582	1.70E-71	-1.69E-46
MS.gene056083	MS.gene80239	0.836347	9.87E-57	-1.69E-46
MS.gene056166	MS.gene80239	0.835204	1.92E-56	-1.69E-46
MS.gene056198	MS.gene80239	-0.815852	7.48E-52	-1.69E-46
MS.gene056200	MS.gene80239	-0.800286	1.55E-48	-1.69E-46
MS.gene056224	MS.gene80239	-0.824111	9.63E-54	-1.69E-46
MS.gene056310	MS.gene80239	-0.817439	3.30E-52	-1.69E-46
MS.gene056311	MS.gene80239	-0.840045	1.10E-57	-1.69E-46
MS.gene056313	MS.gene80239	-0.801381	9.25E-49	-1.69E-46
MS.gene056359	MS.gene80239	-0.822668	2.09E-53	-1.69E-46
MS.gene056374	MS.gene80239	0.897772	1.02E-76	-1.69E-46
MS.gene056387	MS.gene80239	0.857179	1.95E-62	-1.69E-46
MS.gene056409	MS.gene80239	0.844574	6.95E-59	-1.69E-46
MS.gene056422	MS.gene80239	0.805001	1.65E-49	-1.69E-46
MS.gene056446	MS.gene80239	0.859534	3.87E-63	-1.69E-46
MS.gene056448	MS.gene80239	0.80242	5.66E-49	-1.69E-46
MS.gene056449	MS.gene80239	0.817483	3.22E-52	-1.69E-46
MS.gene056450	MS.gene80239	0.835288	1.83E-56	-1.69E-46
MS.gene056487	MS.gene80239	0.819499	1.12E-52	-1.69E-46
MS.gene056504	MS.gene80239	0.967046	9.66E-127	-1.69E-46
MS.gene056510	MS.gene80239	0.95253	1.99E-110	-1.69E-46
MS.gene056549	MS.gene80239	0.85101	1.17E-60	-1.69E-46
MS.gene056550	MS.gene80239	-0.84602	2.82E-59	-1.69E-46
MS.gene056590	MS.gene80239	-0.810317	1.22E-50	-1.69E-46
MS.gene056591	MS.gene80239	-0.811834	5.74E-51	-1.69E-46
MS.gene056610	MS.gene80239	0.857354	1.73E-62	-1.69E-46
MS.gene056657	MS.gene80239	0.949426	1.30E-107	-1.69E-46
MS.gene05666	MS.gene80239	0.802229	6.19E-49	-1.69E-46
MS.gene056692	MS.gene80239	0.907055	7.66E-81	-1.69E-46
MS.gene056694	MS.gene80239	-0.827096	1.89E-54	-1.69E-46
MS.gene056761	MS.gene80239	-0.817459	3.26E-52	-1.69E-46
MS.gene056856	MS.gene80239	-0.844753	6.22E-59	-1.69E-46
MS.gene056857	MS.gene80239	-0.819284	1.26E-52	-1.69E-46
MS.gene056878	MS.gene80239	0.857879	1.21E-62	-1.69E-46
MS.gene056898	MS.gene80239	0.86803	8.84E-66	-1.69E-46
MS.gene056946	MS.gene80239	0.825171	5.42E-54	-1.69E-46
MS.gene056947	MS.gene80239	0.801984	6.96E-49	-1.69E-46
MS.gene057014	MS.gene80239	-0.856291	3.55E-62	-1.69E-46
MS.gene057076	MS.gene80239	0.863908	1.78E-64	-1.69E-46
MS.gene057086	MS.gene80239	0.864298	1.34E-64	-1.69E-46
MS.gene057129	MS.gene80239	0.821564	3.78E-53	-1.69E-46
MS.gene057331	MS.gene80239	0.866056	3.77E-65	-1.69E-46
MS.gene057332	MS.gene80239	0.810039	1.40E-50	-1.69E-46
MS.gene057416	MS.gene80239	0.883835	3.20E-71	-1.69E-46
MS.gene057473	MS.gene80239	-0.812547	4.01E-51	-1.69E-46
MS.gene057499	MS.gene80239	-0.808245	3.41E-50	-1.69E-46
MS.gene05753	MS.gene80239	0.839107	1.93E-57	-1.69E-46
MS.gene057658	MS.gene80239	0.863939	1.74E-64	-1.69E-46
MS.gene057687	MS.gene80239	0.826964	2.03E-54	-1.69E-46
MS.gene057734	MS.gene80239	0.818497	1.90E-52	-1.69E-46
MS.gene057768	MS.gene80239	-0.83517	1.96E-56	-1.69E-46
MS.gene057805	MS.gene80239	0.803806	2.92E-49	-1.69E-46
MS.gene057831	MS.gene80239	0.898733	3.97E-77	-1.69E-46
MS.gene057856	MS.gene80239	0.8246	7.39E-54	-1.69E-46
MS.gene057857	MS.gene80239	0.857801	1.27E-62	-1.69E-46
MS.gene057872	MS.gene80239	0.833652	4.71E-56	-1.69E-46
MS.gene05787	MS.gene80239	0.879568	1.12E-69	-1.69E-46
MS.gene057926	MS.gene80239	0.845231	4.62E-59	-1.69E-46
MS.gene057986	MS.gene80239	0.830433	2.94E-55	-1.69E-46
MS.gene058019	MS.gene80239	0.825233	5.24E-54	-1.69E-46
MS.gene058068	MS.gene80239	-0.836897	7.15E-57	-1.69E-46
MS.gene058099	MS.gene80239	-0.831691	1.45E-55	-1.69E-46
MS.gene058109	MS.gene80239	-0.839881	1.22E-57	-1.69E-46
MS.gene058111	MS.gene80239	-0.853216	2.77E-61	-1.69E-46
MS.gene058117	MS.gene80239	-0.845673	3.51E-59	-1.69E-46
MS.gene058130	MS.gene80239	0.847673	9.97E-60	-1.69E-46
MS.gene058157	MS.gene80239	0.858333	8.86E-63	-1.69E-46
MS.gene058171	MS.gene80239	-0.863692	2.08E-64	-1.69E-46
MS.gene058173	MS.gene80239	-0.85485	9.35E-62	-1.69E-46
MS.gene058175	MS.gene80239	-0.867068	1.80E-65	-1.69E-46
MS.gene058183	MS.gene80239	0.80034	1.51E-48	-1.69E-46
MS.gene058268	MS.gene80239	-0.844367	7.90E-59	-1.69E-46
MS.gene058269	MS.gene80239	-0.838695	2.47E-57	-1.69E-46
MS.gene058323	MS.gene80239	0.823969	1.04E-53	-1.69E-46
MS.gene058334	MS.gene80239	-0.8953	1.09E-75	-1.69E-46
MS.gene058335	MS.gene80239	0.834882	2.32E-56	-1.69E-46
MS.gene058338	MS.gene80239	0.873127	1.87E-67	-1.69E-46
MS.gene05837	MS.gene80239	0.920512	1.17E-87	-1.69E-46
MS.gene058382	MS.gene80239	-0.821025	5.03E-53	-1.69E-46
MS.gene058419	MS.gene80239	0.951008	5.04E-109	-1.69E-46
MS.gene058493	MS.gene80239	-0.802013	6.86E-49	-1.69E-46
MS.gene058544	MS.gene80239	0.914454	1.88E-84	-1.69E-46
MS.gene058603	MS.gene80239	-0.81904	1.43E-52	-1.69E-46
MS.gene058691	MS.gene80239	-0.805572	1.25E-49	-1.69E-46
MS.gene058719	MS.gene80239	0.838744	2.40E-57	-1.69E-46
MS.gene058723	MS.gene80239	0.873606	1.29E-67	-1.69E-46
MS.gene058773	MS.gene80239	0.929629	5.28E-93	-1.69E-46
MS.gene058838	MS.gene80239	0.895245	1.15E-75	-1.69E-46
MS.gene05883	MS.gene80239	0.821303	4.34E-53	-1.69E-46
MS.gene058978	MS.gene80239	-0.834167	3.50E-56	-1.69E-46
MS.gene059022	MS.gene80239	0.961476	9.56E-120	-1.69E-46
MS.gene059023	MS.gene80239	0.929334	8.07E-93	-1.69E-46
MS.gene059029	MS.gene80239	0.829799	4.20E-55	-1.69E-46
MS.gene059045	MS.gene80239	-0.839169	1.86E-57	-1.69E-46
MS.gene059079	MS.gene80239	0.822918	1.83E-53	-1.69E-46
MS.gene059103	MS.gene80239	-0.808654	2.78E-50	-1.69E-46
MS.gene05912	MS.gene80239	0.850044	2.19E-60	-1.69E-46
MS.gene05913	MS.gene80239	0.883888	3.06E-71	-1.69E-46
MS.gene05914	MS.gene80239	0.832188	1.09E-55	-1.69E-46
MS.gene059223	MS.gene80239	-0.819815	9.53E-53	-1.69E-46
MS.gene059305	MS.gene80239	0.829504	4.96E-55	-1.69E-46
MS.gene05934	MS.gene80239	0.846959	1.57E-59	-1.69E-46
MS.gene059367	MS.gene80239	0.882414	1.06E-70	-1.69E-46
MS.gene059368	MS.gene80239	0.810189	1.30E-50	-1.69E-46
MS.gene059479	MS.gene80239	-0.800719	1.26E-48	-1.69E-46
MS.gene059480	MS.gene80239	-0.807632	4.60E-50	-1.69E-46
MS.gene059526	MS.gene80239	-0.82025	7.57E-53	-1.69E-46
MS.gene059667	MS.gene80239	0.861987	6.97E-64	-1.69E-46
MS.gene059677	MS.gene80239	0.948314	1.21E-106	-1.69E-46
MS.gene059680	MS.gene80239	0.805499	1.30E-49	-1.69E-46
MS.gene059699	MS.gene80239	-0.842123	3.13E-58	-1.69E-46
MS.gene059701	MS.gene80239	-0.837398	5.32E-57	-1.69E-46
MS.gene059703	MS.gene80239	-0.856592	2.90E-62	-1.69E-46
MS.gene059718	MS.gene80239	0.927629	9.00E-92	-1.69E-46
MS.gene059756	MS.gene80239	0.906207	1.90E-80	-1.69E-46
MS.gene059801	MS.gene80239	0.877771	4.81E-69	-1.69E-46
MS.gene059837	MS.gene80239	0.901172	3.51E-78	-1.69E-46
MS.gene059865	MS.gene80239	0.963178	9.08E-122	-1.69E-46
MS.gene059902	MS.gene80239	0.851981	6.23E-61	-1.69E-46
MS.gene059916	MS.gene80239	-0.821158	4.69E-53	-1.69E-46
MS.gene059953	MS.gene80239	-0.821667	3.57E-53	-1.69E-46
MS.gene059955	MS.gene80239	-0.814486	1.50E-51	-1.69E-46
MS.gene06000	MS.gene80239	0.915501	5.46E-85	-1.69E-46
MS.gene060187	MS.gene80239	-0.808291	3.33E-50	-1.69E-46
MS.gene060193	MS.gene80239	0.809293	2.03E-50	-1.69E-46
MS.gene06027	MS.gene80239	0.831375	1.73E-55	-1.69E-46
MS.gene060295	MS.gene80239	0.808531	2.96E-50	-1.69E-46
MS.gene060337	MS.gene80239	-0.834317	3.21E-56	-1.69E-46
MS.gene060341	MS.gene80239	0.820842	5.54E-53	-1.69E-46
MS.gene060405	MS.gene80239	-0.800549	1.37E-48	-1.69E-46
MS.gene060482	MS.gene80239	0.880145	6.98E-70	-1.69E-46
MS.gene060526	MS.gene80239	0.823009	1.74E-53	-1.69E-46
MS.gene060593	MS.gene80239	-0.835421	1.69E-56	-1.69E-46
MS.gene060595	MS.gene80239	-0.889872	1.64E-73	-1.69E-46
MS.gene060602	MS.gene80239	-0.823037	1.72E-53	-1.69E-46
MS.gene060703	MS.gene80239	0.935332	1.00E-96	-1.69E-46
MS.gene060728	MS.gene80239	0.832272	1.04E-55	-1.69E-46
MS.gene060762	MS.gene80239	0.928658	2.11E-92	-1.69E-46
MS.gene060778	MS.gene80239	0.924786	4.42E-90	-1.69E-46
MS.gene06077	MS.gene80239	0.959136	4.13E-117	-1.69E-46
MS.gene060823	MS.gene80239	-0.849514	3.08E-60	-1.69E-46
MS.gene060835	MS.gene80239	0.845665	3.52E-59	-1.69E-46
MS.gene06084	MS.gene80239	-0.810171	1.32E-50	-1.69E-46
MS.gene060929	MS.gene80239	-0.801405	9.14E-49	-1.69E-46
MS.gene06092	MS.gene80239	0.883812	3.27E-71	-1.69E-46
MS.gene06097	MS.gene80239	0.845422	4.10E-59	-1.69E-46
MS.gene060982	MS.gene80239	0.960301	2.11E-118	-1.69E-46
MS.gene061044	MS.gene80239	-0.860925	1.47E-63	-1.69E-46
MS.gene061134	MS.gene80239	0.853854	1.81E-61	-1.69E-46
MS.gene061150	MS.gene80239	0.902537	8.76E-79	-1.69E-46
MS.gene061171	MS.gene80239	0.80661	7.57E-50	-1.69E-46
MS.gene061200	MS.gene80239	0.82321	1.57E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80239.t1	MTR_3g106820	98.780	164	2	0	1	164	46	209	4.24e-113	320

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80239.t1	AT4G32260	78.431	153	31	1	11	161	66	218	6.95e-70	211

Find 36 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAGAAGCTCTTGCAAATT+TGG	0.138611	3.4:-93049575	MS.gene80239:CDS
TTCCAACTCCTTCACTTCTT+CGG	0.354892	3.4:+93049729	None:intergenic
AGAAATTCAACGACTATGAT+TGG	0.371223	3.4:+93049859	None:intergenic
CACCCCTCTCGGAACCTTCA+TGG	0.382299	3.4:-93049803	MS.gene80239:CDS
GAACCTTGTTAACAATATCT+TGG	0.384952	3.4:+93049497	None:intergenic
TTGAGATATCAACGAGAAAC+AGG	0.396683	3.4:+93049472	None:intergenic
TGCAAATTTGGAAAAGCAAA+AGG	0.407369	3.4:-93049563	MS.gene80239:CDS
CGCAGCTCTCAAAACTGCAT+TGG	0.476740	3.4:+93049699	None:intergenic
GAAATTCAACGACTATGATT+GGG	0.478683	3.4:+93049860	None:intergenic
CGCGTCACGATTGTCCATGA+AGG	0.481050	3.4:+93049789	None:intergenic
CTTCACTTCTTCGGATGTGT+TGG	0.483273	3.4:+93049738	None:intergenic
GGAAGTTGCCGCTAGGGTCA+TGG	0.514941	3.4:+93049954	None:intergenic
AAACTCTACTTCACCCCTCT+CGG	0.522559	3.4:-93049814	MS.gene80239:CDS
AGAGAGGGAAGTTGCCGCTA+GGG	0.535819	3.4:+93049948	None:intergenic
AAGAGAGGGAAGTTGCCGCT+AGG	0.555867	3.4:+93049947	None:intergenic
TAGCCAAGATATTGTTAACA+AGG	0.566254	3.4:-93049500	MS.gene80239:CDS
AGCGAGGGAAGGTGGTGCGA+AGG	0.566516	3.4:+93049921	None:intergenic
ATCCGAAGAAGTGAAGGAGT+TGG	0.580997	3.4:-93049731	MS.gene80239:CDS
TGCGCGTGCTGAAATTGCGG+TGG	0.591536	3.4:-93049680	MS.gene80239:CDS
AAGCGAAGATTGCGGAAGGT+AGG	0.592242	3.4:-93049618	MS.gene80239:CDS
TGGTGCGAAGGCGAAAGAGA+GGG	0.595311	3.4:+93049933	None:intergenic
CGACTATGATTGGGAGAGTG+AGG	0.595912	3.4:+93049869	None:intergenic
CAACACATCCGAAGAAGTGA+AGG	0.596455	3.4:-93049737	MS.gene80239:CDS
AGCTGCGCGTGCTGAAATTG+CGG	0.598150	3.4:-93049683	MS.gene80239:CDS
GTTTGTCGAGAGCGAACATG+AGG	0.598866	3.4:+93049833	None:intergenic
GTGGTGCGAAGGCGAAAGAG+AGG	0.606516	3.4:+93049932	None:intergenic
GTCCATGAAGGTTCCGAGAG+GGG	0.611279	3.4:+93049801	None:intergenic
TGTCCATGAAGGTTCCGAGA+GGG	0.615991	3.4:+93049800	None:intergenic
AATCGTGACGCGGAAATCAG+AGG	0.616507	3.4:-93049778	MS.gene80239:CDS
GATTGCGGAAGGTAGGAAGA+AGG	0.621119	3.4:-93049611	MS.gene80239:CDS
GTTGAAGCGAAGATTGCGGA+AGG	0.664257	3.4:-93049622	MS.gene80239:CDS
GAGGTTGAAATCGAAGAGTG+CGG	0.686862	3.4:+93049888	None:intergenic
TGAAGTTGAAGCGAAGATTG+CGG	0.692066	3.4:-93049626	MS.gene80239:CDS
ACTCAAATCCATGACCCTAG+CGG	0.699556	3.4:-93049962	None:intergenic
CTTCATGGACAATCGTGACG+CGG	0.701097	3.4:-93049788	MS.gene80239:CDS
TTGTCCATGAAGGTTCCGAG+AGG	0.735316	3.4:+93049799	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGAAATTCAACGACTATGAT+TGG	+	chr3.4:93049576-93049595	None:intergenic	30.0%
	GAAATTCAACGACTATGATT+GGG	+	chr3.4:93049575-93049594	None:intergenic	30.0%
	GAACCTTGTTAACAATATCT+TGG	+	chr3.4:93049938-93049957	None:intergenic	30.0%
	TAGCCAAGATATTGTTAACA+AGG	-	chr3.4:93049932-93049951	MS.gene80239:CDS	30.0%
	TGCAAATTTGGAAAAGCAAA+AGG	-	chr3.4:93049869-93049888	MS.gene80239:CDS	30.0%
	GCAAGAAGCTCTTGCAAATT+TGG	-	chr3.4:93049857-93049876	MS.gene80239:CDS	40.0%
	TGAAGTTGAAGCGAAGATTG+CGG	-	chr3.4:93049806-93049825	MS.gene80239:CDS	40.0%
	TTCCAACTCCTTCACTTCTT+CGG	+	chr3.4:93049706-93049725	None:intergenic	40.0%
	AAACTCTACTTCACCCCTCT+CGG	-	chr3.4:93049618-93049637	MS.gene80239:CDS	45.0%
	ATCCGAAGAAGTGAAGGAGT+TGG	-	chr3.4:93049701-93049720	MS.gene80239:CDS	45.0%
	CAACACATCCGAAGAAGTGA+AGG	-	chr3.4:93049695-93049714	MS.gene80239:CDS	45.0%
	CTTCACTTCTTCGGATGTGT+TGG	+	chr3.4:93049697-93049716	None:intergenic	45.0%
	GAGGTTGAAATCGAAGAGTG+CGG	+	chr3.4:93049547-93049566	None:intergenic	45.0%
	AAGCGAAGATTGCGGAAGGT+AGG	-	chr3.4:93049814-93049833	MS.gene80239:CDS	50.0%
	AATCGTGACGCGGAAATCAG+AGG	-	chr3.4:93049654-93049673	MS.gene80239:CDS	50.0%
	CGACTATGATTGGGAGAGTG+AGG	+	chr3.4:93049566-93049585	None:intergenic	50.0%
	CGCAGCTCTCAAAACTGCAT+TGG	+	chr3.4:93049736-93049755	None:intergenic	50.0%
	CTTCATGGACAATCGTGACG+CGG	-	chr3.4:93049644-93049663	MS.gene80239:CDS	50.0%
	GATTGCGGAAGGTAGGAAGA+AGG	-	chr3.4:93049821-93049840	MS.gene80239:CDS	50.0%
	GTTGAAGCGAAGATTGCGGA+AGG	-	chr3.4:93049810-93049829	MS.gene80239:CDS	50.0%
	GTTTGTCGAGAGCGAACATG+AGG	+	chr3.4:93049602-93049621	None:intergenic	50.0%
	TGTCCATGAAGGTTCCGAGA+GGG	+	chr3.4:93049635-93049654	None:intergenic	50.0%
	TTGTCCATGAAGGTTCCGAG+AGG	+	chr3.4:93049636-93049655	None:intergenic	50.0%
!	TTTTCGAAAGCGAGGGAAGG+TGG	+	chr3.4:93049522-93049541	None:intergenic	50.0%
!!!	GCTTTTTCGAAAGCGAGGGA+AGG	+	chr3.4:93049525-93049544	None:intergenic	50.0%
!!!	TGCGGCTTTTTCGAAAGCGA+GGG	+	chr3.4:93049529-93049548	None:intergenic	50.0%
	AAGAGAGGGAAGTTGCCGCT+AGG	+	chr3.4:93049488-93049507	None:intergenic	55.0%
	AGAGAGGGAAGTTGCCGCTA+GGG	+	chr3.4:93049487-93049506	None:intergenic	55.0%
	AGCTGCGCGTGCTGAAATTG+CGG	-	chr3.4:93049749-93049768	MS.gene80239:CDS	55.0%
	CGCGTCACGATTGTCCATGA+AGG	+	chr3.4:93049646-93049665	None:intergenic	55.0%
	GTCCATGAAGGTTCCGAGAG+GGG	+	chr3.4:93049634-93049653	None:intergenic	55.0%
	TGGTGCGAAGGCGAAAGAGA+GGG	+	chr3.4:93049502-93049521	None:intergenic	55.0%
!!!	GTGCGGCTTTTTCGAAAGCG+AGG	+	chr3.4:93049530-93049549	None:intergenic	55.0%
	CACCCCTCTCGGAACCTTCA+TGG	-	chr3.4:93049629-93049648	MS.gene80239:CDS	60.0%
	GTGGTGCGAAGGCGAAAGAG+AGG	+	chr3.4:93049503-93049522	None:intergenic	60.0%
	TGCGCGTGCTGAAATTGCGG+TGG	-	chr3.4:93049752-93049771	MS.gene80239:CDS	60.0%
	AGCGAGGGAAGGTGGTGCGA+AGG	+	chr3.4:93049514-93049533	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	93049480	93049974	93049480	ID=MS.gene80239
chr3.4	mRNA	93049480	93049974	93049480	ID=MS.gene80239.t1;Parent=MS.gene80239
chr3.4	exon	93049480	93049974	93049480	ID=MS.gene80239.t1.exon1;Parent=MS.gene80239.t1
chr3.4	CDS	93049480	93049974	93049480	ID=cds.MS.gene80239.t1;Parent=MS.gene80239.t1

Gene Sequence

>MS.gene80239

ATGACCCTAGCGGCAACTTCCCTCTCTTTCGCCTTCGCACCACCTTCCCTCGCTTTCGAAAAAGCCGCACTCTTCGATTTCAACCTCACTCTCCCAATCATAGTCGTTGAATTTCTCTTCCTCATGTTCGCTCTCGACAAACTCTACTTCACCCCTCTCGGAACCTTCATGGACAATCGTGACGCGGAAATCAGAGGCAAACTCAACAGCGTCACCAACACATCCGAAGAAGTGAAGGAGTTGGAAGAACAAGCCAATGCAGTTTTGAGAGCTGCGCGTGCTGAAATTGCGGTGGCGCTGAATCAGATGAAGAAAGAGACTCAAGCTGAAGTTGAAGCGAAGATTGCGGAAGGTAGGAAGAAGGTTGATGCTGAATTGCAAGAAGCTCTTGCAAATTTGGAAAAGCAAAAGGAAGAAACTGTTAAAGCTCTTGATTCTCAGATTGCTGCTCTTAGCCAAGATATTGTTAACAAGGTTCTTCCTGTTTCTCGTTGA

Protein sequence

>MS.gene80239.t1

MTLAATSLSFAFAPPSLAFEKAALFDFNLTLPIIVVEFLFLMFALDKLYFTPLGTFMDNRDAEIRGKLNSVTNTSEEVKELEEQANAVLRAARAEIAVALNQMKKETQAEVEAKIAEGRKKVDAELQEALANLEKQKEETVKALDSQIAALSQDIVNKVLPVSR