Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09162.t1 | XP_013455937.1 | 95.2 | 500 | 22 | 1 | 1 | 498 | 1 | 500 | 2.70E-284 | 987.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09162.t1 | Q56WF8 | 62.9 | 498 | 171 | 5 | 6 | 494 | 9 | 501 | 8.4e-186 | 651.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09162.t1 | A0A072ULM8 | 95.2 | 500 | 22 | 1 | 1 | 498 | 1 | 500 | 1.9e-284 | 987.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04921 | MS.gene09162 | 0.810406 | 1.17E-50 | -1.69E-46 |
MS.gene049281 | MS.gene09162 | 0.834934 | 2.25E-56 | -1.69E-46 |
MS.gene049790 | MS.gene09162 | 0.846251 | 2.44E-59 | -1.69E-46 |
MS.gene050082 | MS.gene09162 | 0.8403 | 9.45E-58 | -1.69E-46 |
MS.gene050496 | MS.gene09162 | -0.834636 | 2.67E-56 | -1.69E-46 |
MS.gene050521 | MS.gene09162 | 0.82663 | 2.44E-54 | -1.69E-46 |
MS.gene051044 | MS.gene09162 | 0.847094 | 1.44E-59 | -1.69E-46 |
MS.gene051127 | MS.gene09162 | 0.806529 | 7.87E-50 | -1.69E-46 |
MS.gene051138 | MS.gene09162 | 0.816052 | 6.75E-52 | -1.69E-46 |
MS.gene051364 | MS.gene09162 | 0.832264 | 1.04E-55 | -1.69E-46 |
MS.gene051366 | MS.gene09162 | 0.838849 | 2.25E-57 | -1.69E-46 |
MS.gene051367 | MS.gene09162 | 0.820543 | 6.49E-53 | -1.69E-46 |
MS.gene051422 | MS.gene09162 | 0.847059 | 1.47E-59 | -1.69E-46 |
MS.gene051651 | MS.gene09162 | 0.836851 | 7.35E-57 | -1.69E-46 |
MS.gene051718 | MS.gene09162 | 0.813629 | 2.32E-51 | -1.69E-46 |
MS.gene053420 | MS.gene09162 | 0.811134 | 8.15E-51 | -1.69E-46 |
MS.gene054056 | MS.gene09162 | 0.823091 | 1.67E-53 | -1.69E-46 |
MS.gene054959 | MS.gene09162 | 0.82388 | 1.09E-53 | -1.69E-46 |
MS.gene05589 | MS.gene09162 | -0.81806 | 2.39E-52 | -1.69E-46 |
MS.gene05590 | MS.gene09162 | 0.828782 | 7.42E-55 | -1.69E-46 |
MS.gene055942 | MS.gene09162 | 0.874532 | 6.28E-68 | -1.69E-46 |
MS.gene056354 | MS.gene09162 | 0.835812 | 1.35E-56 | -1.69E-46 |
MS.gene056504 | MS.gene09162 | -0.820136 | 8.04E-53 | -1.69E-46 |
MS.gene056856 | MS.gene09162 | 0.830529 | 2.79E-55 | -1.69E-46 |
MS.gene057548 | MS.gene09162 | 0.827751 | 1.32E-54 | -1.69E-46 |
MS.gene057549 | MS.gene09162 | 0.818419 | 1.98E-52 | -1.69E-46 |
MS.gene058015 | MS.gene09162 | 0.820014 | 8.58E-53 | -1.69E-46 |
MS.gene058068 | MS.gene09162 | 0.84201 | 3.36E-58 | -1.69E-46 |
MS.gene058099 | MS.gene09162 | 0.811583 | 6.51E-51 | -1.69E-46 |
MS.gene058111 | MS.gene09162 | 0.802134 | 6.48E-49 | -1.69E-46 |
MS.gene058171 | MS.gene09162 | 0.8059 | 1.07E-49 | -1.69E-46 |
MS.gene058175 | MS.gene09162 | 0.804018 | 2.64E-49 | -1.69E-46 |
MS.gene058268 | MS.gene09162 | 0.85163 | 7.83E-61 | -1.69E-46 |
MS.gene058269 | MS.gene09162 | 0.836217 | 1.06E-56 | -1.69E-46 |
MS.gene058334 | MS.gene09162 | 0.803528 | 3.34E-49 | -1.69E-46 |
MS.gene058628 | MS.gene09162 | 0.810186 | 1.31E-50 | -1.69E-46 |
MS.gene058630 | MS.gene09162 | 0.803291 | 3.74E-49 | -1.69E-46 |
MS.gene059865 | MS.gene09162 | -0.809234 | 2.09E-50 | -1.69E-46 |
MS.gene060076 | MS.gene09162 | 0.81388 | 2.05E-51 | -1.69E-46 |
MS.gene060595 | MS.gene09162 | 0.81163 | 6.36E-51 | -1.69E-46 |
MS.gene060823 | MS.gene09162 | 0.80575 | 1.15E-49 | -1.69E-46 |
MS.gene060929 | MS.gene09162 | 0.818118 | 2.32E-52 | -1.69E-46 |
MS.gene060982 | MS.gene09162 | -0.801368 | 9.30E-49 | -1.69E-46 |
MS.gene061044 | MS.gene09162 | 0.815236 | 1.03E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09162.t1 | MTR_4g057595 | 95.417 | 480 | 22 | 0 | 19 | 498 | 21 | 500 | 0.0 | 962 |
MS.gene09162.t1 | MTR_4g057585 | 90.909 | 495 | 42 | 2 | 1 | 493 | 1 | 494 | 0.0 | 929 |
MS.gene09162.t1 | MTR_4g057600 | 74.597 | 496 | 122 | 2 | 1 | 494 | 1 | 494 | 0.0 | 779 |
MS.gene09162.t1 | MTR_2g095750 | 65.323 | 496 | 162 | 6 | 7 | 497 | 13 | 503 | 0.0 | 677 |
MS.gene09162.t1 | MTR_2g095730 | 62.702 | 496 | 167 | 8 | 9 | 497 | 16 | 500 | 0.0 | 627 |
MS.gene09162.t1 | MTR_1g094155 | 61.677 | 501 | 169 | 6 | 3 | 496 | 7 | 491 | 0.0 | 624 |
MS.gene09162.t1 | MTR_4g057570 | 64.167 | 480 | 158 | 7 | 19 | 493 | 21 | 491 | 0.0 | 623 |
MS.gene09162.t1 | MTR_1g050545 | 60.887 | 496 | 179 | 4 | 7 | 498 | 3 | 487 | 0.0 | 604 |
MS.gene09162.t1 | MTR_2g095710 | 58.963 | 463 | 172 | 8 | 34 | 493 | 35 | 482 | 0.0 | 536 |
MS.gene09162.t1 | MTR_5g097180 | 33.005 | 406 | 255 | 7 | 91 | 489 | 37 | 432 | 3.02e-70 | 231 |
MS.gene09162.t1 | MTR_4g084710 | 32.020 | 406 | 259 | 7 | 91 | 489 | 39 | 434 | 3.36e-66 | 221 |
MS.gene09162.t1 | MTR_3g079560 | 30.913 | 427 | 237 | 14 | 95 | 493 | 92 | 488 | 2.61e-55 | 192 |
MS.gene09162.t1 | MTR_3g079590 | 29.767 | 430 | 238 | 14 | 95 | 493 | 92 | 488 | 2.55e-51 | 182 |
MS.gene09162.t1 | MTR_3g079570 | 30.193 | 414 | 256 | 12 | 95 | 493 | 93 | 488 | 3.51e-51 | 182 |
MS.gene09162.t1 | MTR_3g034290 | 28.163 | 490 | 314 | 12 | 27 | 491 | 10 | 486 | 3.85e-50 | 179 |
MS.gene09162.t1 | MTR_3g079600 | 29.929 | 421 | 252 | 12 | 95 | 493 | 90 | 489 | 4.36e-50 | 179 |
MS.gene09162.t1 | MTR_3g079630 | 31.368 | 424 | 247 | 15 | 95 | 493 | 92 | 496 | 4.44e-50 | 179 |
MS.gene09162.t1 | MTR_7g080180 | 27.922 | 462 | 260 | 12 | 95 | 491 | 42 | 495 | 7.72e-50 | 178 |
MS.gene09162.t1 | MTR_3g434850 | 30.536 | 429 | 244 | 18 | 95 | 491 | 44 | 450 | 9.34e-50 | 177 |
MS.gene09162.t1 | MTR_8g011350 | 28.446 | 457 | 260 | 11 | 95 | 492 | 45 | 493 | 1.43e-49 | 177 |
MS.gene09162.t1 | MTR_4g122960 | 28.378 | 444 | 262 | 13 | 88 | 492 | 46 | 472 | 2.62e-48 | 174 |
MS.gene09162.t1 | MTR_3g079620 | 29.930 | 431 | 258 | 15 | 88 | 493 | 85 | 496 | 7.10e-48 | 173 |
MS.gene09162.t1 | MTR_4g122950 | 28.046 | 435 | 277 | 12 | 88 | 492 | 46 | 474 | 7.40e-48 | 172 |
MS.gene09162.t1 | MTR_1g021010 | 30.184 | 434 | 267 | 12 | 76 | 493 | 71 | 484 | 7.94e-48 | 172 |
MS.gene09162.t1 | MTR_2g063000 | 29.742 | 427 | 250 | 13 | 95 | 491 | 53 | 459 | 2.79e-47 | 171 |
MS.gene09162.t1 | MTR_1g020090 | 28.982 | 452 | 270 | 13 | 67 | 493 | 70 | 495 | 2.79e-47 | 171 |
MS.gene09162.t1 | MTR_7g051430 | 28.139 | 462 | 254 | 11 | 95 | 491 | 44 | 492 | 7.08e-47 | 170 |
MS.gene09162.t1 | MTR_2g062990 | 30.310 | 419 | 256 | 13 | 95 | 491 | 54 | 458 | 7.34e-47 | 169 |
MS.gene09162.t1 | MTR_5g072570 | 29.279 | 444 | 265 | 13 | 88 | 497 | 37 | 465 | 2.48e-46 | 168 |
MS.gene09162.t1 | MTR_2g062980 | 30.024 | 413 | 265 | 12 | 95 | 491 | 54 | 458 | 5.52e-46 | 167 |
MS.gene09162.t1 | MTR_4g089155 | 28.235 | 425 | 273 | 12 | 92 | 491 | 64 | 481 | 7.70e-46 | 167 |
MS.gene09162.t1 | MTR_3g045770 | 29.953 | 424 | 257 | 12 | 97 | 493 | 43 | 453 | 1.05e-45 | 166 |
MS.gene09162.t1 | MTR_7g051430 | 36.220 | 254 | 143 | 4 | 95 | 342 | 44 | 284 | 2.70e-45 | 164 |
MS.gene09162.t1 | MTR_2g449850 | 28.959 | 442 | 252 | 18 | 86 | 491 | 43 | 458 | 3.04e-45 | 165 |
MS.gene09162.t1 | MTR_3g498755 | 29.108 | 426 | 256 | 15 | 97 | 491 | 31 | 441 | 4.82e-45 | 164 |
MS.gene09162.t1 | MTR_2g081620 | 28.770 | 431 | 257 | 13 | 95 | 496 | 55 | 464 | 1.61e-44 | 163 |
MS.gene09162.t1 | MTR_1g040370 | 30.170 | 411 | 247 | 13 | 86 | 491 | 36 | 411 | 1.74e-44 | 162 |
MS.gene09162.t1 | MTR_1g021020 | 29.040 | 427 | 256 | 13 | 88 | 493 | 85 | 485 | 2.67e-44 | 163 |
MS.gene09162.t1 | MTR_4g021530 | 27.719 | 469 | 272 | 15 | 62 | 489 | 23 | 465 | 2.78e-44 | 162 |
MS.gene09162.t1 | MTR_8g099930 | 27.725 | 422 | 266 | 12 | 95 | 489 | 47 | 456 | 2.86e-44 | 162 |
MS.gene09162.t1 | MTR_3g100420 | 27.570 | 428 | 251 | 12 | 107 | 492 | 84 | 494 | 4.06e-44 | 162 |
MS.gene09162.t1 | MTR_7g021130 | 28.704 | 432 | 257 | 17 | 92 | 491 | 41 | 453 | 1.62e-43 | 160 |
MS.gene09162.t1 | MTR_4g021510 | 27.938 | 451 | 286 | 13 | 65 | 488 | 25 | 463 | 3.64e-43 | 159 |
MS.gene09162.t1 | MTR_1g095560 | 28.538 | 424 | 256 | 13 | 95 | 490 | 47 | 451 | 3.70e-43 | 159 |
MS.gene09162.t1 | MTR_2g018600 | 26.777 | 422 | 273 | 9 | 97 | 489 | 50 | 464 | 4.64e-43 | 159 |
MS.gene09162.t1 | MTR_3g090130 | 28.640 | 419 | 269 | 12 | 95 | 491 | 42 | 452 | 4.99e-43 | 159 |
MS.gene09162.t1 | MTR_3g090150 | 29.070 | 430 | 268 | 14 | 88 | 491 | 41 | 459 | 2.49e-42 | 157 |
MS.gene09162.t1 | MTR_1g095560 | 27.716 | 451 | 257 | 15 | 95 | 490 | 47 | 483 | 3.08e-42 | 157 |
MS.gene09162.t1 | MTR_8g011350 | 27.842 | 431 | 244 | 11 | 95 | 466 | 45 | 467 | 3.63e-42 | 157 |
MS.gene09162.t1 | MTR_2g018590 | 27.252 | 433 | 260 | 11 | 96 | 489 | 48 | 464 | 4.15e-42 | 156 |
MS.gene09162.t1 | MTR_0003s0560 | 27.442 | 430 | 262 | 13 | 87 | 491 | 79 | 483 | 5.47e-42 | 156 |
MS.gene09162.t1 | MTR_7g080180 | 35.521 | 259 | 146 | 6 | 95 | 342 | 42 | 290 | 1.32e-41 | 155 |
MS.gene09162.t1 | MTR_4g021490 | 29.024 | 410 | 249 | 13 | 109 | 489 | 69 | 465 | 2.36e-41 | 154 |
MS.gene09162.t1 | MTR_2g018630 | 26.730 | 419 | 270 | 10 | 97 | 489 | 53 | 460 | 2.47e-41 | 154 |
MS.gene09162.t1 | MTR_3g034290 | 28.501 | 407 | 259 | 10 | 27 | 409 | 10 | 408 | 4.86e-41 | 152 |
MS.gene09162.t1 | MTR_4g021535 | 27.553 | 421 | 241 | 14 | 109 | 489 | 65 | 461 | 4.93e-41 | 153 |
MS.gene09162.t1 | MTR_7g013790 | 28.966 | 435 | 244 | 15 | 97 | 491 | 51 | 460 | 2.70e-40 | 151 |
MS.gene09162.t1 | MTR_4g021500 | 29.327 | 416 | 238 | 13 | 109 | 488 | 69 | 464 | 3.45e-40 | 155 |
MS.gene09162.t1 | MTR_4g021500 | 26.411 | 443 | 281 | 14 | 68 | 489 | 464 | 882 | 1.02e-39 | 154 |
MS.gene09162.t1 | MTR_4g021500 | 29.327 | 416 | 238 | 13 | 109 | 488 | 69 | 464 | 4.12e-40 | 155 |
MS.gene09162.t1 | MTR_4g021500 | 25.482 | 467 | 273 | 14 | 68 | 489 | 464 | 900 | 1.60e-37 | 147 |
MS.gene09162.t1 | MTR_4g021520 | 28.802 | 434 | 244 | 15 | 97 | 489 | 56 | 465 | 4.94e-40 | 150 |
MS.gene09162.t1 | MTR_2g012850 | 27.123 | 424 | 271 | 11 | 95 | 491 | 49 | 461 | 1.69e-39 | 149 |
MS.gene09162.t1 | MTR_1g095540 | 27.419 | 434 | 260 | 15 | 88 | 489 | 40 | 450 | 3.01e-39 | 148 |
MS.gene09162.t1 | MTR_4g075150 | 29.767 | 430 | 247 | 16 | 95 | 489 | 48 | 457 | 7.97e-39 | 147 |
MS.gene09162.t1 | MTR_4g075150 | 28.438 | 429 | 252 | 16 | 95 | 489 | 48 | 455 | 1.06e-38 | 147 |
MS.gene09162.t1 | MTR_2g012860 | 25.346 | 434 | 274 | 10 | 92 | 491 | 52 | 469 | 3.62e-38 | 145 |
MS.gene09162.t1 | MTR_0003s0560 | 34.762 | 210 | 133 | 4 | 87 | 293 | 79 | 287 | 1.16e-34 | 133 |
MS.gene09162.t1 | MTR_4g056520 | 25.917 | 436 | 271 | 11 | 91 | 487 | 29 | 451 | 1.56e-34 | 135 |
MS.gene09162.t1 | MTR_2g063000 | 26.887 | 424 | 235 | 13 | 95 | 491 | 53 | 428 | 4.05e-34 | 134 |
MS.gene09162.t1 | MTR_4g021520 | 28.967 | 397 | 218 | 14 | 97 | 453 | 56 | 428 | 3.14e-33 | 131 |
MS.gene09162.t1 | MTR_2g009200 | 23.023 | 430 | 242 | 14 | 106 | 490 | 50 | 435 | 4.06e-29 | 119 |
MS.gene09162.t1 | MTR_2g084530 | 26.897 | 435 | 264 | 14 | 91 | 486 | 29 | 448 | 1.25e-27 | 115 |
MS.gene09162.t1 | MTR_2g018630 | 24.859 | 354 | 235 | 9 | 156 | 489 | 13 | 355 | 5.96e-25 | 106 |
MS.gene09162.t1 | MTR_1g102130 | 23.666 | 431 | 242 | 17 | 97 | 491 | 107 | 486 | 5.00e-22 | 99.4 |
MS.gene09162.t1 | MTR_4g021535 | 22.556 | 399 | 242 | 11 | 109 | 489 | 65 | 414 | 1.54e-21 | 97.1 |
MS.gene09162.t1 | MTR_0075s0010 | 40.230 | 87 | 44 | 3 | 110 | 189 | 35 | 120 | 1.92e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09162.t1 | AT3G45010 | 62.851 | 498 | 171 | 5 | 6 | 494 | 9 | 501 | 0.0 | 656 |
MS.gene09162.t1 | AT3G10410 | 62.475 | 493 | 175 | 6 | 7 | 493 | 8 | 496 | 0.0 | 648 |
MS.gene09162.t1 | AT5G22980 | 61.310 | 504 | 180 | 7 | 4 | 498 | 3 | 500 | 0.0 | 632 |
MS.gene09162.t1 | AT5G22960 | 58.065 | 186 | 58 | 3 | 70 | 254 | 8 | 174 | 1.02e-66 | 213 |
MS.gene09162.t1 | AT1G15000 | 31.941 | 407 | 257 | 9 | 91 | 491 | 31 | 423 | 3.85e-66 | 220 |
MS.gene09162.t1 | AT3G25420 | 28.942 | 463 | 248 | 11 | 95 | 491 | 44 | 491 | 1.11e-56 | 196 |
MS.gene09162.t1 | AT4G12910 | 28.976 | 459 | 253 | 11 | 95 | 492 | 49 | 495 | 2.14e-54 | 190 |
MS.gene09162.t1 | AT3G52000 | 29.594 | 419 | 264 | 9 | 88 | 490 | 71 | 474 | 4.94e-52 | 184 |
MS.gene09162.t1 | AT3G52010 | 29.302 | 430 | 255 | 12 | 88 | 490 | 72 | 479 | 4.59e-51 | 181 |
MS.gene09162.t1 | AT1G73300 | 27.700 | 426 | 271 | 12 | 81 | 491 | 35 | 438 | 6.01e-51 | 180 |
MS.gene09162.t1 | AT1G73300 | 27.700 | 426 | 271 | 12 | 81 | 491 | 35 | 438 | 6.01e-51 | 180 |
MS.gene09162.t1 | AT2G22920 | 29.054 | 444 | 273 | 16 | 66 | 492 | 15 | 433 | 6.49e-51 | 179 |
MS.gene09162.t1 | AT3G12203 | 28.675 | 415 | 252 | 14 | 96 | 491 | 24 | 413 | 1.30e-50 | 178 |
MS.gene09162.t1 | AT3G12203 | 28.606 | 416 | 253 | 14 | 96 | 492 | 45 | 435 | 2.52e-50 | 178 |
MS.gene09162.t1 | AT3G12203 | 29.177 | 401 | 240 | 14 | 110 | 491 | 1 | 376 | 9.80e-50 | 175 |
MS.gene09162.t1 | AT3G52020 | 30.024 | 423 | 260 | 16 | 88 | 490 | 87 | 493 | 1.38e-49 | 177 |
MS.gene09162.t1 | AT1G73280 | 27.253 | 455 | 279 | 14 | 59 | 492 | 16 | 439 | 1.52e-49 | 176 |
MS.gene09162.t1 | AT3G17180 | 30.698 | 430 | 258 | 16 | 93 | 491 | 51 | 471 | 2.13e-49 | 176 |
MS.gene09162.t1 | AT2G23010 | 27.273 | 440 | 287 | 11 | 65 | 491 | 15 | 434 | 2.44e-49 | 175 |
MS.gene09162.t1 | AT5G08260 | 32.184 | 435 | 238 | 18 | 95 | 489 | 53 | 470 | 4.59e-49 | 176 |
MS.gene09162.t1 | AT2G23010 | 27.045 | 440 | 288 | 11 | 65 | 491 | 15 | 434 | 8.55e-49 | 174 |
MS.gene09162.t1 | AT1G73270 | 27.139 | 409 | 265 | 9 | 97 | 491 | 49 | 438 | 1.05e-48 | 174 |
MS.gene09162.t1 | AT2G22980 | 27.891 | 441 | 265 | 15 | 68 | 489 | 19 | 425 | 1.13e-48 | 173 |
MS.gene09162.t1 | AT1G73310 | 27.059 | 425 | 275 | 11 | 81 | 491 | 35 | 438 | 1.18e-48 | 174 |
MS.gene09162.t1 | AT1G73270 | 27.073 | 410 | 266 | 9 | 96 | 491 | 48 | 438 | 1.31e-48 | 174 |
MS.gene09162.t1 | AT5G36180 | 27.913 | 412 | 260 | 12 | 96 | 491 | 48 | 438 | 3.29e-48 | 172 |
MS.gene09162.t1 | AT5G23210 | 31.435 | 439 | 243 | 17 | 95 | 489 | 65 | 489 | 2.45e-47 | 171 |
MS.gene09162.t1 | AT2G22970 | 27.438 | 441 | 275 | 16 | 68 | 491 | 18 | 430 | 3.49e-47 | 169 |
MS.gene09162.t1 | AT1G73290 | 26.895 | 409 | 268 | 8 | 96 | 492 | 47 | 436 | 5.66e-47 | 169 |
MS.gene09162.t1 | AT2G35770 | 27.594 | 424 | 269 | 8 | 88 | 489 | 45 | 452 | 1.09e-46 | 169 |
MS.gene09162.t1 | AT2G22920 | 30.548 | 383 | 231 | 13 | 66 | 432 | 15 | 378 | 1.47e-46 | 167 |
MS.gene09162.t1 | AT4G15100 | 29.186 | 442 | 261 | 16 | 95 | 498 | 58 | 485 | 1.60e-46 | 169 |
MS.gene09162.t1 | AT3G63470 | 29.274 | 427 | 242 | 17 | 95 | 490 | 95 | 492 | 3.41e-46 | 168 |
MS.gene09162.t1 | AT4G12910 | 29.114 | 395 | 213 | 9 | 95 | 429 | 49 | 436 | 5.20e-46 | 167 |
MS.gene09162.t1 | AT3G10450 | 27.488 | 422 | 267 | 14 | 86 | 491 | 36 | 434 | 6.88e-46 | 166 |
MS.gene09162.t1 | AT4G30810 | 27.488 | 422 | 272 | 10 | 93 | 492 | 50 | 459 | 2.96e-45 | 165 |
MS.gene09162.t1 | AT2G22980 | 28.117 | 409 | 243 | 13 | 68 | 458 | 19 | 394 | 8.03e-45 | 162 |
MS.gene09162.t1 | AT3G07990 | 27.725 | 422 | 274 | 12 | 88 | 489 | 41 | 451 | 8.70e-45 | 164 |
MS.gene09162.t1 | AT3G10450 | 27.139 | 409 | 261 | 13 | 99 | 491 | 4 | 391 | 1.04e-44 | 162 |
MS.gene09162.t1 | AT2G22980 | 28.467 | 411 | 239 | 14 | 68 | 458 | 19 | 394 | 1.43e-44 | 162 |
MS.gene09162.t1 | AT3G12220 | 29.087 | 416 | 254 | 17 | 96 | 493 | 42 | 434 | 1.87e-44 | 162 |
MS.gene09162.t1 | AT3G12240 | 28.261 | 414 | 258 | 15 | 96 | 492 | 43 | 434 | 2.98e-44 | 161 |
MS.gene09162.t1 | AT1G73290 | 28.448 | 348 | 225 | 5 | 96 | 432 | 47 | 381 | 3.12e-44 | 160 |
MS.gene09162.t1 | AT3G12220 | 29.529 | 403 | 243 | 17 | 109 | 493 | 25 | 404 | 1.12e-43 | 159 |
MS.gene09162.t1 | AT2G24000 | 29.009 | 424 | 262 | 14 | 97 | 492 | 46 | 458 | 2.13e-43 | 160 |
MS.gene09162.t1 | AT1G73310 | 27.671 | 365 | 236 | 8 | 81 | 432 | 35 | 384 | 3.82e-43 | 158 |
MS.gene09162.t1 | AT2G22970 | 28.871 | 381 | 233 | 13 | 68 | 432 | 18 | 376 | 5.80e-43 | 157 |
MS.gene09162.t1 | AT2G22970 | 28.871 | 381 | 233 | 13 | 68 | 432 | 18 | 376 | 9.84e-43 | 157 |
MS.gene09162.t1 | AT1G61130 | 28.571 | 420 | 269 | 12 | 95 | 491 | 45 | 456 | 1.55e-42 | 157 |
MS.gene09162.t1 | AT2G12480 | 28.392 | 398 | 266 | 8 | 97 | 491 | 47 | 428 | 1.85e-42 | 157 |
MS.gene09162.t1 | AT2G12480 | 28.856 | 402 | 260 | 10 | 97 | 491 | 47 | 429 | 2.00e-42 | 157 |
MS.gene09162.t1 | AT2G22990 | 26.606 | 436 | 265 | 16 | 81 | 491 | 25 | 430 | 2.34e-42 | 156 |
MS.gene09162.t1 | AT2G22920 | 32.907 | 313 | 180 | 10 | 68 | 368 | 18 | 312 | 2.41e-42 | 153 |
MS.gene09162.t1 | AT1G73290 | 36.735 | 196 | 118 | 1 | 96 | 285 | 47 | 242 | 2.89e-42 | 153 |
MS.gene09162.t1 | AT1G28110 | 27.880 | 434 | 254 | 17 | 95 | 492 | 45 | 455 | 2.91e-42 | 157 |
MS.gene09162.t1 | AT1G28110 | 27.880 | 434 | 254 | 17 | 95 | 492 | 45 | 455 | 2.91e-42 | 157 |
MS.gene09162.t1 | AT2G23000 | 26.730 | 419 | 258 | 13 | 97 | 491 | 41 | 434 | 3.75e-42 | 156 |
MS.gene09162.t1 | AT2G23000 | 26.730 | 419 | 258 | 13 | 97 | 491 | 41 | 434 | 3.75e-42 | 156 |
MS.gene09162.t1 | AT1G33540 | 27.021 | 433 | 264 | 13 | 96 | 491 | 44 | 461 | 6.94e-42 | 155 |
MS.gene09162.t1 | AT3G12230 | 28.846 | 416 | 253 | 17 | 96 | 492 | 42 | 433 | 1.49e-41 | 154 |
MS.gene09162.t1 | AT2G12480 | 28.392 | 398 | 265 | 9 | 97 | 491 | 47 | 427 | 1.55e-41 | 154 |
MS.gene09162.t1 | AT3G10450 | 28.729 | 362 | 226 | 11 | 86 | 432 | 36 | 380 | 1.64e-41 | 154 |
MS.gene09162.t1 | AT1G11080 | 28.959 | 442 | 249 | 17 | 95 | 491 | 64 | 485 | 1.84e-41 | 155 |
MS.gene09162.t1 | AT1G11080 | 28.959 | 442 | 249 | 17 | 95 | 491 | 64 | 485 | 2.04e-41 | 155 |
MS.gene09162.t1 | AT1G43780 | 29.907 | 428 | 253 | 14 | 97 | 491 | 53 | 466 | 2.12e-41 | 155 |
MS.gene09162.t1 | AT5G23210 | 40.887 | 203 | 115 | 4 | 95 | 292 | 65 | 267 | 2.20e-41 | 154 |
MS.gene09162.t1 | AT1G33540 | 26.977 | 430 | 262 | 13 | 99 | 491 | 4 | 418 | 2.40e-41 | 153 |
MS.gene09162.t1 | AT3G02110 | 27.982 | 436 | 252 | 16 | 97 | 491 | 53 | 467 | 3.12e-41 | 154 |
MS.gene09162.t1 | AT2G35780 | 27.314 | 443 | 271 | 12 | 76 | 489 | 25 | 445 | 3.49e-41 | 154 |
MS.gene09162.t1 | AT2G24010 | 28.986 | 414 | 263 | 12 | 97 | 491 | 46 | 447 | 6.36e-41 | 153 |
MS.gene09162.t1 | AT4G30610 | 29.070 | 430 | 259 | 17 | 93 | 491 | 44 | 458 | 6.67e-41 | 153 |
MS.gene09162.t1 | AT5G42240 | 29.412 | 425 | 262 | 13 | 95 | 491 | 46 | 460 | 8.50e-41 | 153 |
MS.gene09162.t1 | AT2G33530 | 27.252 | 433 | 260 | 16 | 95 | 492 | 47 | 459 | 1.84e-40 | 152 |
MS.gene09162.t1 | AT5G42230 | 28.571 | 427 | 263 | 9 | 95 | 491 | 42 | 456 | 2.15e-40 | 152 |
MS.gene09162.t1 | AT5G42230 | 28.571 | 427 | 263 | 9 | 95 | 491 | 42 | 456 | 2.15e-40 | 152 |
MS.gene09162.t1 | AT3G10450 | 28.367 | 349 | 220 | 10 | 99 | 432 | 4 | 337 | 2.69e-40 | 149 |
MS.gene09162.t1 | AT2G12480 | 27.857 | 420 | 265 | 9 | 97 | 491 | 47 | 453 | 3.98e-40 | 151 |
MS.gene09162.t1 | AT2G22970 | 38.725 | 204 | 111 | 5 | 68 | 264 | 18 | 214 | 9.12e-40 | 146 |
MS.gene09162.t1 | AT1G73280 | 30.189 | 318 | 201 | 7 | 59 | 368 | 16 | 320 | 9.23e-40 | 148 |
MS.gene09162.t1 | AT3G12220 | 36.032 | 247 | 141 | 7 | 96 | 326 | 42 | 287 | 1.50e-39 | 147 |
MS.gene09162.t1 | AT5G09640 | 25.780 | 481 | 267 | 17 | 66 | 491 | 17 | 462 | 1.86e-39 | 149 |
MS.gene09162.t1 | AT3G17180 | 31.063 | 367 | 219 | 14 | 93 | 429 | 51 | 413 | 3.43e-39 | 148 |
MS.gene09162.t1 | AT2G22980 | 30.351 | 313 | 185 | 9 | 68 | 368 | 19 | 310 | 4.20e-39 | 145 |
MS.gene09162.t1 | AT2G05850 | 26.014 | 419 | 282 | 12 | 88 | 489 | 71 | 478 | 4.53e-39 | 148 |
MS.gene09162.t1 | AT2G22990 | 26.866 | 402 | 241 | 14 | 81 | 458 | 25 | 397 | 2.01e-38 | 145 |
MS.gene09162.t1 | AT2G22990 | 26.434 | 401 | 244 | 13 | 81 | 458 | 25 | 397 | 4.44e-38 | 145 |
MS.gene09162.t1 | AT2G24010 | 27.739 | 429 | 264 | 13 | 97 | 491 | 46 | 462 | 3.13e-36 | 140 |
MS.gene09162.t1 | AT5G23210 | 30.923 | 401 | 219 | 17 | 133 | 489 | 8 | 394 | 6.95e-36 | 138 |
MS.gene09162.t1 | AT5G23210 | 30.750 | 400 | 219 | 17 | 134 | 489 | 8 | 393 | 3.05e-35 | 136 |
MS.gene09162.t1 | AT2G22990 | 25.229 | 436 | 262 | 17 | 81 | 491 | 25 | 421 | 1.22e-34 | 135 |
MS.gene09162.t1 | AT2G27920 | 27.397 | 438 | 257 | 17 | 94 | 486 | 32 | 453 | 1.48e-32 | 129 |
MS.gene09162.t1 | AT3G56540 | 40.136 | 147 | 85 | 3 | 88 | 232 | 87 | 232 | 8.96e-32 | 123 |
MS.gene09162.t1 | AT1G73280 | 26.211 | 351 | 218 | 11 | 156 | 491 | 12 | 336 | 1.26e-31 | 124 |
MS.gene09162.t1 | AT2G24010 | 26.211 | 454 | 264 | 14 | 97 | 491 | 17 | 458 | 1.87e-31 | 126 |
MS.gene09162.t1 | AT5G36180 | 26.590 | 346 | 223 | 11 | 156 | 491 | 12 | 336 | 1.89e-30 | 121 |
MS.gene09162.t1 | AT5G36180 | 26.590 | 346 | 223 | 11 | 156 | 491 | 12 | 336 | 1.89e-30 | 121 |
MS.gene09162.t1 | AT2G24010 | 33.471 | 242 | 137 | 7 | 97 | 318 | 17 | 254 | 2.10e-29 | 119 |
MS.gene09162.t1 | AT5G23210 | 41.463 | 164 | 91 | 4 | 134 | 292 | 8 | 171 | 2.40e-29 | 119 |
MS.gene09162.t1 | AT1G73280 | 24.926 | 337 | 212 | 11 | 170 | 491 | 1 | 311 | 1.02e-26 | 110 |
MS.gene09162.t1 | AT5G36180 | 26.036 | 338 | 215 | 10 | 156 | 475 | 12 | 332 | 6.86e-26 | 108 |
MS.gene09162.t1 | AT5G36180 | 27.622 | 286 | 183 | 8 | 156 | 432 | 12 | 282 | 7.04e-26 | 108 |
MS.gene09162.t1 | AT1G73310 | 27.835 | 291 | 176 | 10 | 156 | 432 | 12 | 282 | 1.56e-25 | 107 |
MS.gene09162.t1 | AT2G27920 | 26.446 | 363 | 216 | 13 | 164 | 486 | 30 | 381 | 1.99e-25 | 108 |
MS.gene09162.t1 | AT2G22990 | 24.198 | 343 | 213 | 13 | 168 | 491 | 2 | 316 | 4.40e-24 | 103 |
MS.gene09162.t1 | AT2G22990 | 23.907 | 343 | 214 | 13 | 168 | 491 | 2 | 316 | 1.48e-23 | 101 |
MS.gene09162.t1 | AT2G22980 | 25.490 | 306 | 183 | 10 | 168 | 458 | 2 | 277 | 5.38e-23 | 99.4 |
MS.gene09162.t1 | AT2G27920 | 25.429 | 350 | 210 | 13 | 177 | 486 | 48 | 386 | 5.09e-20 | 92.4 |
Find 90 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTAATTACCTTGCGGATT+TGG | 0.221438 | 4.3:+43484707 | None:intergenic |
CGTTGGTTTGGTGAAAATTT+TGG | 0.249695 | 4.3:+43484921 | None:intergenic |
TCTCTTGTGTGGAATGATTA+TGG | 0.249738 | 4.3:-43483818 | MS.gene09162:CDS |
TTTGGCCAGGGAATTCAAAA+TGG | 0.267534 | 4.3:-43481679 | MS.gene09162:intron |
AAGAATGACTTCTATATTAC+TGG | 0.289799 | 4.3:-43483160 | MS.gene09162:CDS |
CCACACAAGAGACAAGTTAT+TGG | 0.301922 | 4.3:+43483829 | None:intergenic |
ATGTTCCTGCTCTTGCATCT+AGG | 0.318626 | 4.3:-43483117 | MS.gene09162:CDS |
CACTTCAGATGTTGGCAAAC+TGG | 0.324425 | 4.3:-43481385 | MS.gene09162:CDS |
ATTCCATCCTCAAGAAGTTC+AGG | 0.338717 | 4.3:+43482026 | None:intergenic |
GCAGGATTGTTGAATAGTTA+TGG | 0.361275 | 4.3:-43481578 | MS.gene09162:CDS |
TTTATGGCAACCTCGCAATC+TGG | 0.365782 | 4.3:+43482635 | None:intergenic |
TCACCATGAATTATATTAAC+TGG | 0.366105 | 4.3:+43484855 | None:intergenic |
TTAGGGATGCTTTAGGTGTT+GGG | 0.366917 | 4.3:-43482130 | MS.gene09162:CDS |
ATTATATTAACTGGATCCTT+TGG | 0.371296 | 4.3:+43484864 | None:intergenic |
CCAGTCAACCATATCACAAC+TGG | 0.373577 | 4.3:+43483911 | None:intergenic |
TGATTTGTATGACTTCTTGC+AGG | 0.374846 | 4.3:-43483310 | MS.gene09162:intron |
AAGACAGTTAGGGATGCTTT+AGG | 0.377229 | 4.3:-43482137 | MS.gene09162:CDS |
TATGCTTGGTACTGAATTGC+TGG | 0.395817 | 4.3:+43482725 | None:intergenic |
AAGTCATTCTTAACAAACTT+AGG | 0.397900 | 4.3:+43483172 | None:intergenic |
TGTTCCTGCTCTTGCATCTA+GGG | 0.398381 | 4.3:-43483116 | MS.gene09162:CDS |
ATTAAAGTTCTTATATATGC+TGG | 0.402158 | 4.3:-43482005 | MS.gene09162:CDS |
AACATCTGAAGTGCAGCTTT+TGG | 0.416607 | 4.3:+43481395 | None:intergenic |
TACATTAACGTTACCGGCAA+TGG | 0.417475 | 4.3:+43482324 | None:intergenic |
GGATGCATGGGAACTTGAAT+AGG | 0.421333 | 4.3:-43481364 | MS.gene09162:CDS |
GATCCAGTTAATATAATTCA+TGG | 0.424315 | 4.3:-43484858 | MS.gene09162:CDS |
TATCTGTTCACATTGTTGTA+AGG | 0.425655 | 4.3:+43482363 | None:intergenic |
GGTGAATGGGGCAGGACATA+TGG | 0.430010 | 4.3:-43481432 | MS.gene09162:CDS |
AGTACTTACATTAACGTTAC+CGG | 0.431784 | 4.3:+43482318 | None:intergenic |
AGTCATTCTTAACAAACTTA+GGG | 0.434933 | 4.3:+43483173 | None:intergenic |
AGGGTTCACCATGGAAATAA+AGG | 0.441831 | 4.3:-43483097 | MS.gene09162:CDS |
GTTAGGGATGCTTTAGGTGT+TGG | 0.454819 | 4.3:-43482131 | MS.gene09162:CDS |
ATAATGCAATGTTGCAAGAT+TGG | 0.457321 | 4.3:-43482073 | MS.gene09162:CDS |
TTAAAGTTCTTATATATGCT+GGG | 0.458726 | 4.3:-43482004 | MS.gene09162:CDS |
AGGATGCCCCAGTTGTGATA+TGG | 0.462648 | 4.3:-43483919 | MS.gene09162:CDS |
GATATTCCACATGATGAAAC+TGG | 0.479658 | 4.3:-43483342 | MS.gene09162:CDS |
TAGCTAAAACCTGTCCCAAT+TGG | 0.482214 | 4.3:+43483381 | None:intergenic |
TTATGGCAACCTCGCAATCT+GGG | 0.484542 | 4.3:+43482636 | None:intergenic |
TGACCGAGATCTTCAATAGA+AGG | 0.490638 | 4.3:+43484759 | None:intergenic |
GGCAGGACATATGGTCCCTA+TGG | 0.494483 | 4.3:-43481423 | MS.gene09162:CDS |
TTGGCCAGGGAATTCAAAAT+GGG | 0.496576 | 4.3:-43481678 | MS.gene09162:intron |
ATGCAAACTGAGAGTATGCT+TGG | 0.507916 | 4.3:+43482711 | None:intergenic |
ATTCCTGAACTTCTTGAGGA+TGG | 0.511069 | 4.3:-43482029 | MS.gene09162:CDS |
GTGATGTGTAACAGGTGAAT+GGG | 0.514606 | 4.3:-43481445 | MS.gene09162:intron |
AAGCTTTAACTTATTGCCAA+AGG | 0.518571 | 4.3:-43484880 | MS.gene09162:CDS |
ATATGGTTGACTGGAGGTCC+AGG | 0.522115 | 4.3:-43483902 | MS.gene09162:CDS |
TTGGTACTGAATTGCTGGAT+TGG | 0.523254 | 4.3:+43482730 | None:intergenic |
ACGAGGAAGCGAATAGTATC+CGG | 0.523737 | 4.3:+43484731 | None:intergenic |
GTTCATGCAATGAAGTGGTC+AGG | 0.523840 | 4.3:-43481656 | MS.gene09162:CDS |
TTGTGTGGAATGATTATGGT+TGG | 0.526168 | 4.3:-43483814 | MS.gene09162:CDS |
TTTGAATTGGCAGAGAGTAA+AGG | 0.527254 | 4.3:-43482406 | MS.gene09162:intron |
GTTGACCAACCAATTGGGAC+AGG | 0.528579 | 4.3:-43483390 | MS.gene09162:CDS |
GCTAGTTCACTGCTGCAACC+TGG | 0.533445 | 4.3:+43483884 | None:intergenic |
GGATATTCCTGAACTTCTTG+AGG | 0.534859 | 4.3:-43482033 | MS.gene09162:CDS |
AAAAGCTGCACTTCAGATGT+TGG | 0.535873 | 4.3:-43481393 | MS.gene09162:CDS |
TAGGGATGCTTTAGGTGTTG+GGG | 0.537401 | 4.3:-43482129 | MS.gene09162:CDS |
TGTGATGTGTAACAGGTGAA+TGG | 0.544527 | 4.3:-43481446 | MS.gene09162:intron |
GAAGATCTCGGTCACCATGC+CGG | 0.547294 | 4.3:-43484750 | MS.gene09162:CDS |
CCAGTTGTGATATGGTTGAC+TGG | 0.551036 | 4.3:-43483911 | MS.gene09162:CDS |
ATTACTGGAGAATCATATGC+TGG | 0.551568 | 4.3:-43483145 | MS.gene09162:CDS |
GAATTGGCAGAGAGTAAAGG+TGG | 0.560172 | 4.3:-43482403 | MS.gene09162:intron |
TGTGTGGAATGATTATGGTT+GGG | 0.561713 | 4.3:-43483813 | MS.gene09162:CDS |
GACATAAGAAAGAAATGTCA+AGG | 0.567445 | 4.3:-43482206 | MS.gene09162:CDS |
TTGGATGAGAAACTTTGAAG+TGG | 0.571105 | 4.3:-43482054 | MS.gene09162:CDS |
CCAATAACTTGTCTCTTGTG+TGG | 0.572712 | 4.3:-43483829 | MS.gene09162:CDS |
CAGTCAACCATATCACAACT+GGG | 0.574498 | 4.3:+43483912 | None:intergenic |
ATCTTCAATAGAAGGACCAT+CGG | 0.575473 | 4.3:+43484767 | None:intergenic |
ATGTTGGCAAACTGGATGCA+TGG | 0.577839 | 4.3:-43481377 | MS.gene09162:CDS |
CTAACACCAGTTTCATCATG+TGG | 0.588201 | 4.3:+43483336 | None:intergenic |
GATGCGAGAAGTTGCGTATG+AGG | 0.589321 | 4.3:+43484971 | None:intergenic |
TAAAGTTCTTATATATGCTG+GGG | 0.590091 | 4.3:-43482003 | MS.gene09162:CDS |
GTGTAACAGGTGAATGGGGC+AGG | 0.590576 | 4.3:-43481440 | MS.gene09162:intron |
TACCTTGCGGATTTGGAACG+AGG | 0.592095 | 4.3:+43484714 | None:intergenic |
TAAAACCTGTCCCAATTGGT+TGG | 0.592919 | 4.3:+43483385 | None:intergenic |
TGATAACAAAATGATTACAA+AGG | 0.594810 | 4.3:-43482687 | MS.gene09162:CDS |
GGTCCTTCTATTGAAGATCT+CGG | 0.595179 | 4.3:-43484762 | MS.gene09162:CDS |
CAAGTTGATCCCAGATTGCG+AGG | 0.597604 | 4.3:-43482645 | MS.gene09162:CDS |
AGGGATTACTATAAACCTCA+AGG | 0.608711 | 4.3:-43483068 | MS.gene09162:intron |
AATGGGTTCATGCAATGAAG+TGG | 0.617006 | 4.3:-43481661 | MS.gene09162:CDS |
TGTTGGCAAACTGGATGCAT+GGG | 0.618606 | 4.3:-43481376 | MS.gene09162:CDS |
TGAACCCTAGATGCAAGAGC+AGG | 0.635146 | 4.3:+43483112 | None:intergenic |
AACGAACAATAACAAAAGAG+AGG | 0.642414 | 4.3:+43485004 | None:intergenic |
TTCCTCGTTCCAAATCCGCA+AGG | 0.666060 | 4.3:-43484716 | MS.gene09162:intron |
CTAACCTTTAGAAAAGAGAG+AGG | 0.669936 | 4.3:+43481554 | None:intergenic |
GAAGCGAATAGTATCCGGCA+TGG | 0.671731 | 4.3:+43484736 | None:intergenic |
GAATGATTATGGTTGGGACA+AGG | 0.673972 | 4.3:-43483807 | MS.gene09162:intron |
ATGGGAACTTGAATAGGACA+AGG | 0.685574 | 4.3:-43481358 | MS.gene09162:CDS |
TGATGTGTAACAGGTGAATG+GGG | 0.699009 | 4.3:-43481444 | MS.gene09162:intron |
GTTGTGATATGGTTGACTGG+AGG | 0.703410 | 4.3:-43483908 | MS.gene09162:CDS |
CTTGCATCTAGGGTTCACCA+TGG | 0.722490 | 4.3:-43483106 | MS.gene09162:CDS |
AGTCAACCATATCACAACTG+GGG | 0.752820 | 4.3:+43483913 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAACTAATTAATTAAATA+TGG | + | chr4.3:43481992-43482011 | None:intergenic | 10.0% |
!!! | ATTTTATTTATAATAATCAC+AGG | - | chr4.3:43483160-43483179 | MS.gene09162:CDS | 10.0% |
!! | ATTCAAAATATATTATTGTG+TGG | - | chr4.3:43481867-43481886 | MS.gene09162:intron | 15.0% |
!! | TGTCAATAATAAAACATATT+TGG | + | chr4.3:43482912-43482931 | None:intergenic | 15.0% |
!!! | AAATACAAGATTTTTAATTG+TGG | + | chr4.3:43481807-43481826 | None:intergenic | 15.0% |
!!! | AATTCAAATTGTTTTAGTAT+TGG | - | chr4.3:43484435-43484454 | MS.gene09162:intron | 15.0% |
!!! | AATTTGATTTTATTTGCAAT+TGG | - | chr4.3:43484392-43484411 | MS.gene09162:intron | 15.0% |
!!! | CAAACTTATTTTATTTGAAT+TGG | - | chr4.3:43483953-43483972 | MS.gene09162:CDS | 15.0% |
!!! | CTAAATATCTCTAAAATTTA+CGG | + | chr4.3:43482788-43482807 | None:intergenic | 15.0% |
!!! | TAAAATTTGACTTAATTTTG+TGG | - | chr4.3:43482348-43482367 | MS.gene09162:CDS | 15.0% |
!!! | TCTTTTTTTTATTGAATTTC+AGG | - | chr4.3:43482393-43482412 | MS.gene09162:CDS | 15.0% |
!!! | TGTTACATAATTTTATTAGT+CGG | - | chr4.3:43482131-43482150 | MS.gene09162:CDS | 15.0% |
!! | AAAACAATTTGAATTCAAGA+GGG | + | chr4.3:43484430-43484449 | None:intergenic | 20.0% |
!! | AATCATTCAATCAAAATTGA+AGG | + | chr4.3:43481850-43481869 | None:intergenic | 20.0% |
!! | ATACAAATTTAATTACCTTG+CGG | + | chr4.3:43481674-43481693 | None:intergenic | 20.0% |
!! | ATTAAAGTTCTTATATATGC+TGG | - | chr4.3:43484367-43484386 | MS.gene09162:intron | 20.0% |
!! | ATTATTGACATTATGACTAA+AGG | - | chr4.3:43482922-43482941 | MS.gene09162:intron | 20.0% |
!! | GTATATTATTCAGAACAAAT+CGG | + | chr4.3:43482106-43482125 | None:intergenic | 20.0% |
!! | TAAAACAATTTGAATTCAAG+AGG | + | chr4.3:43484431-43484450 | None:intergenic | 20.0% |
!! | TATGCTTCAAGATATTAATT+GGG | + | chr4.3:43483107-43483126 | None:intergenic | 20.0% |
!! | TGAATCAAGAAAAAATTCTA+AGG | - | chr4.3:43482433-43482452 | MS.gene09162:intron | 20.0% |
!! | TGATAACAAAATGATTACAA+AGG | - | chr4.3:43483685-43483704 | MS.gene09162:intron | 20.0% |
!! | TTAAAGTTCTTATATATGCT+GGG | - | chr4.3:43484368-43484387 | MS.gene09162:intron | 20.0% |
!! | TTATGCTTCAAGATATTAAT+TGG | + | chr4.3:43483108-43483127 | None:intergenic | 20.0% |
!! | TTGACAATACTAGTAAAAAT+GGG | + | chr4.3:43483801-43483820 | None:intergenic | 20.0% |
!! | TTGTCTATGATAATATAGTA+CGG | - | chr4.3:43483888-43483907 | MS.gene09162:CDS | 20.0% |
!! | TTGTTAAAAAAAATGTCATG+TGG | - | chr4.3:43482007-43482026 | MS.gene09162:CDS | 20.0% |
!! | TTTCAAACCACTATTAATAT+TGG | + | chr4.3:43482319-43482338 | None:intergenic | 20.0% |
!! | TTTGACAATACTAGTAAAAA+TGG | + | chr4.3:43483802-43483821 | None:intergenic | 20.0% |
!!! | AAGTTATTGGCAATTTTAAA+AGG | + | chr4.3:43482533-43482552 | None:intergenic | 20.0% |
!!! | TTTACAATGGTTTTAAATTG+CGG | - | chr4.3:43482642-43482661 | MS.gene09162:CDS | 20.0% |
!!! | TTTGCTATTTTATTCTCATT+TGG | - | chr4.3:43484675-43484694 | MS.gene09162:intron | 20.0% |
!!! | TTTTTTATCAAGTAGTCTAA+TGG | - | chr4.3:43484518-43484537 | MS.gene09162:intron | 20.0% |
! | AAGAATGACTTCTATATTAC+TGG | - | chr4.3:43483212-43483231 | MS.gene09162:intron | 25.0% |
! | AAGTCATTCTTAACAAACTT+AGG | + | chr4.3:43483203-43483222 | None:intergenic | 25.0% |
! | AGTCATTCTTAACAAACTTA+GGG | + | chr4.3:43483202-43483221 | None:intergenic | 25.0% |
! | ATAAGCTAAATTGATCAAGT+TGG | + | chr4.3:43484477-43484496 | None:intergenic | 25.0% |
! | ATCTAATCATATCGTATATG+TGG | + | chr4.3:43483132-43483151 | None:intergenic | 25.0% |
! | ATGGAAATAAAGGCAAAAAA+GGG | - | chr4.3:43483285-43483304 | MS.gene09162:intron | 25.0% |
! | ATGTGACTATATAGATCTTA+AGG | - | chr4.3:43482168-43482187 | MS.gene09162:CDS | 25.0% |
! | ATTATATTAACTGGATCCTT+TGG | + | chr4.3:43481511-43481530 | None:intergenic | 25.0% |
! | CAACATTCCAATATTAATAG+TGG | - | chr4.3:43482309-43482328 | MS.gene09162:intron | 25.0% |
! | CACTATTAATATTGGAATGT+TGG | + | chr4.3:43482311-43482330 | None:intergenic | 25.0% |
! | CCATTGTTTATGATTATGAT+AGG | - | chr4.3:43483535-43483554 | MS.gene09162:intron | 25.0% |
! | CCTATCATAATCATAAACAA+TGG | + | chr4.3:43483538-43483557 | None:intergenic | 25.0% |
! | GATCCAGTTAATATAATTCA+TGG | - | chr4.3:43481514-43481533 | MS.gene09162:intron | 25.0% |
! | TAAAGTTCTTATATATGCTG+GGG | - | chr4.3:43484369-43484388 | MS.gene09162:intron | 25.0% |
! | TCAATCAAAATTGAAGGAAT+CGG | + | chr4.3:43481844-43481863 | None:intergenic | 25.0% |
! | TCACCATGAATTATATTAAC+TGG | + | chr4.3:43481520-43481539 | None:intergenic | 25.0% |
! | TCTAAACAAAAAGACAGTTA+GGG | - | chr4.3:43484225-43484244 | MS.gene09162:intron | 25.0% |
! | TGAATTTGTGAAATGAAGTT+AGG | - | chr4.3:43481916-43481935 | MS.gene09162:intron | 25.0% |
! | TTACTTGTAGTACAATGTTA+TGG | + | chr4.3:43482196-43482215 | None:intergenic | 25.0% |
! | TTCTAAACAAAAAGACAGTT+AGG | - | chr4.3:43484224-43484243 | MS.gene09162:intron | 25.0% |
! | TTGATTCCAATACAATTACA+GGG | - | chr4.3:43483596-43483615 | MS.gene09162:intron | 25.0% |
! | TTTGATTCCAATACAATTAC+AGG | - | chr4.3:43483595-43483614 | MS.gene09162:intron | 25.0% |
!! | AACCAAAAATTGAACTGTTT+TGG | + | chr4.3:43484762-43484781 | None:intergenic | 25.0% |
!! | AATAATATTTTGTCCATTGC+CGG | - | chr4.3:43484035-43484054 | MS.gene09162:intron | 25.0% |
!! | ATCCAAAACAGTTCAATTTT+TGG | - | chr4.3:43484757-43484776 | MS.gene09162:CDS | 25.0% |
!!! | ACAGTTCAATTTTTGGTTAA+TGG | - | chr4.3:43484764-43484783 | MS.gene09162:CDS | 25.0% |
!!! | AGGTGTTTTTTTCATTTTGT+AGG | - | chr4.3:43482942-43482961 | MS.gene09162:intron | 25.0% |
!!! | ATATCTCTAAAATTTACGGT+CGG | + | chr4.3:43482784-43482803 | None:intergenic | 25.0% |
AACATTTGATGTCTCTATTG+CGG | - | chr4.3:43483438-43483457 | MS.gene09162:intron | 30.0% | |
AACCCACTTATTAACCTTAA+AGG | + | chr4.3:43484554-43484573 | None:intergenic | 30.0% | |
AACGAACAATAACAAAAGAG+AGG | + | chr4.3:43481371-43481390 | None:intergenic | 30.0% | |
AGTACTTACATTAACGTTAC+CGG | + | chr4.3:43484057-43484076 | None:intergenic | 30.0% | |
ATAATGCAATGTTGCAAGAT+TGG | - | chr4.3:43484299-43484318 | MS.gene09162:intron | 30.0% | |
ATAGTACAATTGCACAATTG+CGG | - | chr4.3:43481737-43481756 | MS.gene09162:intron | 30.0% | |
ATATTATTGTGTGGAGTCAA+AGG | - | chr4.3:43481876-43481895 | MS.gene09162:intron | 30.0% | |
ATGTTATGTATCGTCAATCA+CGG | + | chr4.3:43483423-43483442 | None:intergenic | 30.0% | |
ATTTAATTACCTTGCGGATT+TGG | + | chr4.3:43481668-43481687 | None:intergenic | 30.0% | |
CATGGAAATAAAGGCAAAAA+AGG | - | chr4.3:43483284-43483303 | MS.gene09162:intron | 30.0% | |
GACATAAGAAAGAAATGTCA+AGG | - | chr4.3:43484166-43484185 | MS.gene09162:intron | 30.0% | |
GACTTTATCAATACTGCATT+TGG | - | chr4.3:43483460-43483479 | MS.gene09162:intron | 30.0% | |
GTTTGCTCTATTTATCAACT+TGG | + | chr4.3:43482851-43482870 | None:intergenic | 30.0% | |
TATCTGTTCACATTGTTGTA+AGG | + | chr4.3:43484012-43484031 | None:intergenic | 30.0% | |
TCACAAATCGCAAAAAATAG+CGG | + | chr4.3:43483929-43483948 | None:intergenic | 30.0% | |
TCATTGTCAATCAATGTCTT+TGG | + | chr4.3:43482873-43482892 | None:intergenic | 30.0% | |
TGATTTATGTGATGTGTAAC+AGG | - | chr4.3:43484919-43484938 | MS.gene09162:CDS | 30.0% | |
TGTGTCATATGAGTTTACAA+TGG | - | chr4.3:43482629-43482648 | MS.gene09162:CDS | 30.0% | |
TTGGTTAATGGTAAAAAAGC+AGG | - | chr4.3:43484776-43484795 | MS.gene09162:CDS | 30.0% | |
TTGTTCTGCAATACACTATT+TGG | - | chr4.3:43483856-43483875 | MS.gene09162:CDS | 30.0% | |
! | AAGCTTTAACTTATTGCCAA+AGG | - | chr4.3:43481492-43481511 | MS.gene09162:intron | 30.0% |
! | ATTTTATTCTCATTTGGCCA+GGG | - | chr4.3:43484681-43484700 | MS.gene09162:intron | 30.0% |
! | GACACTGTTGATTAAACTTT+AGG | - | chr4.3:43484890-43484909 | MS.gene09162:CDS | 30.0% |
! | TATTTTATTCTCATTTGGCC+AGG | - | chr4.3:43484680-43484699 | MS.gene09162:intron | 30.0% |
! | TTTTTGTTGACCAACCAATT+GGG | - | chr4.3:43482977-43482996 | MS.gene09162:intron | 30.0% |
!! | CACCTTTAAGGTTAATAAGT+GGG | - | chr4.3:43484549-43484568 | MS.gene09162:intron | 30.0% |
!! | GATTTTATTTGCAATTGGCT+TGG | - | chr4.3:43484397-43484416 | MS.gene09162:intron | 30.0% |
!! | TCACCTTTAAGGTTAATAAG+TGG | - | chr4.3:43484548-43484567 | MS.gene09162:intron | 30.0% |
!!! | CTAGCTTTGTTTTATGAGAA+TGG | - | chr4.3:43482506-43482525 | MS.gene09162:intron | 30.0% |
!!! | CTTTTTTGCCTTTATTTCCA+TGG | + | chr4.3:43483286-43483305 | None:intergenic | 30.0% |
AACAATGCATTGTTACATGC+AGG | + | chr4.3:43484598-43484617 | None:intergenic | 35.0% | |
ACAATGCATTGTTACATGCA+GGG | + | chr4.3:43484597-43484616 | None:intergenic | 35.0% | |
ACTAGTATTGTCAAATAGCG+CGG | - | chr4.3:43483807-43483826 | MS.gene09162:intron | 35.0% | |
AGGGATTACTATAAACCTCA+AGG | - | chr4.3:43483304-43483323 | MS.gene09162:intron | 35.0% | |
ATCTTCAATAGAAGGACCAT+CGG | + | chr4.3:43481608-43481627 | None:intergenic | 35.0% | |
ATGGCTAGAATTCACCTTTA+AGG | - | chr4.3:43484537-43484556 | MS.gene09162:intron | 35.0% | |
ATTACTGGAGAATCATATGC+TGG | - | chr4.3:43483227-43483246 | MS.gene09162:intron | 35.0% | |
CAACATCACAACTGAAATTG+TGG | + | chr4.3:43482737-43482756 | None:intergenic | 35.0% | |
GATATTCCACATGATGAAAC+TGG | - | chr4.3:43483030-43483049 | MS.gene09162:intron | 35.0% | |
GCAAAACCCTGTAATTGTAT+TGG | + | chr4.3:43483605-43483624 | None:intergenic | 35.0% | |
GCAGGATTGTTGAATAGTTA+TGG | - | chr4.3:43484794-43484813 | MS.gene09162:CDS | 35.0% | |
TAGGACATTGTATAACCTTG+AGG | + | chr4.3:43483322-43483341 | None:intergenic | 35.0% | |
TCTCTTGTGTGGAATGATTA+TGG | - | chr4.3:43482554-43482573 | MS.gene09162:intron | 35.0% | |
TGTGTGGAATGATTATGGTT+GGG | - | chr4.3:43482559-43482578 | MS.gene09162:intron | 35.0% | |
TTGTGTGGAATGATTATGGT+TGG | - | chr4.3:43482558-43482577 | MS.gene09162:intron | 35.0% | |
TTTGAATTGGCAGAGAGTAA+AGG | - | chr4.3:43483966-43483985 | MS.gene09162:intron | 35.0% | |
! | CTAACCTTTAGAAAAGAGAG+AGG | + | chr4.3:43484821-43484840 | None:intergenic | 35.0% |
! | CTTTTTGTTGACCAACCAAT+TGG | - | chr4.3:43482976-43482995 | MS.gene09162:intron | 35.0% |
! | GGTGTGATAAGAGTGTATAA+TGG | + | chr4.3:43483780-43483799 | None:intergenic | 35.0% |
! | TCGAACATAAGCATTGCTTT+CGG | + | chr4.3:43482056-43482075 | None:intergenic | 35.0% |
! | TCTATTGATCATTTTGTCCC+TGG | - | chr4.3:43481544-43481563 | MS.gene09162:intron | 35.0% |
! | TCTTGTACCGCAAGTTTTTA+TGG | + | chr4.3:43483756-43483775 | None:intergenic | 35.0% |
! | TGATTTGTATGACTTCTTGC+AGG | - | chr4.3:43483062-43483081 | MS.gene09162:intron | 35.0% |
! | TTATAAGCTTTTCAGCTCGT+TGG | + | chr4.3:43481471-43481490 | None:intergenic | 35.0% |
! | TTGGATGAGAAACTTTGAAG+TGG | - | chr4.3:43484318-43484337 | MS.gene09162:intron | 35.0% |
!! | CAATTACAGGGTTTTGCTAT+TGG | - | chr4.3:43483608-43483627 | MS.gene09162:intron | 35.0% |
!!! | AGGGTTTTGCTATTGGTAAT+GGG | - | chr4.3:43483615-43483634 | MS.gene09162:intron | 35.0% |
!!! | CGTTGGTTTGGTGAAAATTT+TGG | + | chr4.3:43481454-43481473 | None:intergenic | 35.0% |
!!! | GGTGAAAATTTTGGTGTTGA+TGG | + | chr4.3:43481445-43481464 | None:intergenic | 35.0% |
AAAAGCTGCACTTCAGATGT+TGG | - | chr4.3:43484979-43484998 | MS.gene09162:CDS | 40.0% | |
AAGACAGTTAGGGATGCTTT+AGG | - | chr4.3:43484235-43484254 | MS.gene09162:intron | 40.0% | |
AGGGTTCACCATGGAAATAA+AGG | - | chr4.3:43483275-43483294 | MS.gene09162:intron | 40.0% | |
AGTCAACCATATCACAACTG+GGG | + | chr4.3:43482462-43482481 | None:intergenic | 40.0% | |
ATGGGAACTTGAATAGGACA+AGG | - | chr4.3:43485014-43485033 | MS.gene09162:CDS | 40.0% | |
ATTCCATCCTCAAGAAGTTC+AGG | + | chr4.3:43484349-43484368 | None:intergenic | 40.0% | |
ATTCCTGAACTTCTTGAGGA+TGG | - | chr4.3:43484343-43484362 | MS.gene09162:intron | 40.0% | |
CAATGCATTGTTACATGCAG+GGG | + | chr4.3:43484596-43484615 | None:intergenic | 40.0% | |
CAGTCAACCATATCACAACT+GGG | + | chr4.3:43482463-43482482 | None:intergenic | 40.0% | |
CCACACAAGAGACAAGTTAT+TGG | + | chr4.3:43482546-43482565 | None:intergenic | 40.0% | |
CTAACACCAGTTTCATCATG+TGG | + | chr4.3:43483039-43483058 | None:intergenic | 40.0% | |
GAATGATTATGGTTGGGACA+AGG | - | chr4.3:43482565-43482584 | MS.gene09162:intron | 40.0% | |
GAGGTTGCCATAAAAACTTG+CGG | - | chr4.3:43483746-43483765 | MS.gene09162:intron | 40.0% | |
GGATATTCCTGAACTTCTTG+AGG | - | chr4.3:43484339-43484358 | MS.gene09162:intron | 40.0% | |
GGTCCTTCTATTGAAGATCT+CGG | - | chr4.3:43481610-43481629 | MS.gene09162:CDS | 40.0% | |
GTGATGTGTAACAGGTGAAT+GGG | - | chr4.3:43484927-43484946 | MS.gene09162:CDS | 40.0% | |
TAAAACCTGTCCCAATTGGT+TGG | + | chr4.3:43482990-43483009 | None:intergenic | 40.0% | |
TACATTAACGTTACCGGCAA+TGG | + | chr4.3:43484051-43484070 | None:intergenic | 40.0% | |
TAGCTAAAACCTGTCCCAAT+TGG | + | chr4.3:43482994-43483013 | None:intergenic | 40.0% | |
TGACCGAGATCTTCAATAGA+AGG | + | chr4.3:43481616-43481635 | None:intergenic | 40.0% | |
TGATGTGTAACAGGTGAATG+GGG | - | chr4.3:43484928-43484947 | MS.gene09162:CDS | 40.0% | |
TGTGATGTGTAACAGGTGAA+TGG | - | chr4.3:43484926-43484945 | MS.gene09162:CDS | 40.0% | |
TTCTTCGAGCATAGTTCAGT+TGG | + | chr4.3:43484625-43484644 | None:intergenic | 40.0% | |
TTGGCCAGGGAATTCAAAAT+GGG | - | chr4.3:43484694-43484713 | MS.gene09162:intron | 40.0% | |
TTTGGCCAGGGAATTCAAAA+TGG | - | chr4.3:43484693-43484712 | MS.gene09162:intron | 40.0% | |
! | AATGGGTTCATGCAATGAAG+TGG | - | chr4.3:43484711-43484730 | MS.gene09162:intron | 40.0% |
! | ATGCAAACTGAGAGTATGCT+TGG | + | chr4.3:43483664-43483683 | None:intergenic | 40.0% |
! | CCAATAACTTGTCTCTTGTG+TGG | - | chr4.3:43482543-43482562 | MS.gene09162:intron | 40.0% |
! | TATGCTTGGTACTGAATTGC+TGG | + | chr4.3:43483650-43483669 | None:intergenic | 40.0% |
! | TCTTCTCGACGATTTTTCCA+GGG | + | chr4.3:43481564-43481583 | None:intergenic | 40.0% |
! | TGAACCCATTTTGAATTCCC+TGG | + | chr4.3:43484701-43484720 | None:intergenic | 40.0% |
! | TGGACCTCTCTCTTTTCTAA+AGG | - | chr4.3:43484814-43484833 | MS.gene09162:CDS | 40.0% |
! | TTAGGGATGCTTTAGGTGTT+GGG | - | chr4.3:43484242-43484261 | MS.gene09162:intron | 40.0% |
! | TTCTTCTCGACGATTTTTCC+AGG | + | chr4.3:43481565-43481584 | None:intergenic | 40.0% |
! | TTGGTACTGAATTGCTGGAT+TGG | + | chr4.3:43483645-43483664 | None:intergenic | 40.0% |
!! | AACATCTGAAGTGCAGCTTT+TGG | + | chr4.3:43484980-43484999 | None:intergenic | 40.0% |
!! | AGGTTAATAAGTGGGTTGTC+CGG | - | chr4.3:43484557-43484576 | MS.gene09162:intron | 40.0% |
!! | CAGCTTTTGGTTGATCCATA+GGG | + | chr4.3:43484967-43484986 | None:intergenic | 40.0% |
!!! | CAGGGTTTTGCTATTGGTAA+TGG | - | chr4.3:43483614-43483633 | MS.gene09162:intron | 40.0% |
ACGAGGAAGCGAATAGTATC+CGG | + | chr4.3:43481644-43481663 | None:intergenic | 45.0% | |
ATGTTCCTGCTCTTGCATCT+AGG | - | chr4.3:43483255-43483274 | MS.gene09162:intron | 45.0% | |
ATGTTGGCAAACTGGATGCA+TGG | - | chr4.3:43484995-43485014 | MS.gene09162:CDS | 45.0% | |
CACTTCAGATGTTGGCAAAC+TGG | - | chr4.3:43484987-43485006 | MS.gene09162:CDS | 45.0% | |
CATTTGGACCTCGACAAATG+AGG | - | chr4.3:43483476-43483495 | MS.gene09162:intron | 45.0% | |
CCAGTCAACCATATCACAAC+TGG | + | chr4.3:43482464-43482483 | None:intergenic | 45.0% | |
CCAGTTGTGATATGGTTGAC+TGG | - | chr4.3:43482461-43482480 | MS.gene09162:intron | 45.0% | |
GAATTGGCAGAGAGTAAAGG+TGG | - | chr4.3:43483969-43483988 | MS.gene09162:intron | 45.0% | |
GCTTATGTTCGATGAGATCC+AGG | - | chr4.3:43482064-43482083 | MS.gene09162:CDS | 45.0% | |
GGATGCATGGGAACTTGAAT+AGG | - | chr4.3:43485008-43485027 | MS.gene09162:CDS | 45.0% | |
GTTACGATCCTCATTTGTCG+AGG | + | chr4.3:43483487-43483506 | None:intergenic | 45.0% | |
GTTCATGCAATGAAGTGGTC+AGG | - | chr4.3:43484716-43484735 | MS.gene09162:intron | 45.0% | |
GTTGTGATATGGTTGACTGG+AGG | - | chr4.3:43482464-43482483 | MS.gene09162:intron | 45.0% | |
TCGATGAGATCCAGGTCAAA+AGG | - | chr4.3:43482072-43482091 | MS.gene09162:CDS | 45.0% | |
TGTTCCTGCTCTTGCATCTA+GGG | - | chr4.3:43483256-43483275 | MS.gene09162:intron | 45.0% | |
TGTTGGCAAACTGGATGCAT+GGG | - | chr4.3:43484996-43485015 | MS.gene09162:CDS | 45.0% | |
TTATGGCAACCTCGCAATCT+GGG | + | chr4.3:43483739-43483758 | None:intergenic | 45.0% | |
TTTATGGCAACCTCGCAATC+TGG | + | chr4.3:43483740-43483759 | None:intergenic | 45.0% | |
! | GGTACAACAACCTTTTGACC+TGG | + | chr4.3:43482085-43482104 | None:intergenic | 45.0% |
! | GTTAGGGATGCTTTAGGTGT+TGG | - | chr4.3:43484241-43484260 | MS.gene09162:intron | 45.0% |
! | TAGGGATGCTTTAGGTGTTG+GGG | - | chr4.3:43484243-43484262 | MS.gene09162:intron | 45.0% |
!! | AGCTTTTCAGCTCGTTGGTT+TGG | + | chr4.3:43481466-43481485 | None:intergenic | 45.0% |
!! | GCAGCTTTTGGTTGATCCAT+AGG | + | chr4.3:43484968-43484987 | None:intergenic | 45.0% |
!! | GGTTAATAAGTGGGTTGTCC+GGG | - | chr4.3:43484558-43484577 | MS.gene09162:intron | 45.0% |
!! | GTTAATAAGTGGGTTGTCCG+GGG | - | chr4.3:43484559-43484578 | MS.gene09162:intron | 45.0% |
!! | TCGTTTTTCAGCGATTCCGA+TGG | - | chr4.3:43481589-43481608 | MS.gene09162:CDS | 45.0% |
!! | ATTCATAATATAAAATTAAT+AGG | + | chr4.3:43483341-43483360 | None:intergenic | 5.0% |
!!! | AAGATAAAATAAATTTTTTT+GGG | + | chr4.3:43484092-43484111 | None:intergenic | 5.0% |
!!! | TAAGATAAAATAAATTTTTT+TGG | + | chr4.3:43484093-43484112 | None:intergenic | 5.0% |
AGGATGCCCCAGTTGTGATA+TGG | - | chr4.3:43482453-43482472 | MS.gene09162:intron | 50.0% | |
ATATGGTTGACTGGAGGTCC+AGG | - | chr4.3:43482470-43482489 | MS.gene09162:intron | 50.0% | |
GAAGCGAATAGTATCCGGCA+TGG | + | chr4.3:43481639-43481658 | None:intergenic | 50.0% | |
GATGCGAGAAGTTGCGTATG+AGG | + | chr4.3:43481404-43481423 | None:intergenic | 50.0% | |
GTTGACCAACCAATTGGGAC+AGG | - | chr4.3:43482982-43483001 | MS.gene09162:intron | 50.0% | |
TGAACCCTAGATGCAAGAGC+AGG | + | chr4.3:43483263-43483282 | None:intergenic | 50.0% | |
TTCCTCGTTCCAAATCCGCA+AGG | - | chr4.3:43481656-43481675 | MS.gene09162:CDS | 50.0% | |
! | CTTGCATCTAGGGTTCACCA+TGG | - | chr4.3:43483266-43483285 | MS.gene09162:intron | 50.0% |
! | TACCTTGCGGATTTGGAACG+AGG | + | chr4.3:43481661-43481680 | None:intergenic | 50.0% |
!! | CAAGTTGATCCCAGATTGCG+AGG | - | chr4.3:43483727-43483746 | MS.gene09162:intron | 50.0% |
CATTGTTACATGCAGGGGCC+GGG | + | chr4.3:43484591-43484610 | None:intergenic | 55.0% | |
GAAGATCTCGGTCACCATGC+CGG | - | chr4.3:43481622-43481641 | MS.gene09162:CDS | 55.0% | |
GCATTGTTACATGCAGGGGC+CGG | + | chr4.3:43484592-43484611 | None:intergenic | 55.0% | |
GCTAGTTCACTGCTGCAACC+TGG | + | chr4.3:43482491-43482510 | None:intergenic | 55.0% | |
GGCAGGACATATGGTCCCTA+TGG | - | chr4.3:43484949-43484968 | MS.gene09162:CDS | 55.0% | |
GGTGAATGGGGCAGGACATA+TGG | - | chr4.3:43484940-43484959 | MS.gene09162:CDS | 55.0% | |
GTGTAACAGGTGAATGGGGC+AGG | - | chr4.3:43484932-43484951 | MS.gene09162:CDS | 55.0% | |
GGTTGTCCGGGGTTCGAACC+CGG | - | chr4.3:43484570-43484589 | MS.gene09162:intron | 65.0% | |
CAGGGGCCGGGTTCGAACCC+CGG | + | chr4.3:43484579-43484598 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 43481352 | 43485042 | 43481352 | ID=MS.gene09162 |
chr4.3 | mRNA | 43481352 | 43485042 | 43481352 | ID=MS.gene09162.t1;Parent=MS.gene09162 |
chr4.3 | exon | 43484717 | 43485042 | 43484717 | ID=MS.gene09162.t1.exon1;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43484717 | 43485042 | 43484717 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43483808 | 43483979 | 43483808 | ID=MS.gene09162.t1.exon2;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43483808 | 43483979 | 43483808 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43483311 | 43483430 | 43483311 | ID=MS.gene09162.t1.exon3;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43483311 | 43483430 | 43483311 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43483069 | 43483212 | 43483069 | ID=MS.gene09162.t1.exon4;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43483069 | 43483212 | 43483069 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43482627 | 43482777 | 43482627 | ID=MS.gene09162.t1.exon5;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43482627 | 43482777 | 43482627 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43482327 | 43482415 | 43482327 | ID=MS.gene09162.t1.exon6;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43482327 | 43482415 | 43482327 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43481976 | 43482234 | 43481976 | ID=MS.gene09162.t1.exon7;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43481976 | 43482234 | 43481976 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43481559 | 43481692 | 43481559 | ID=MS.gene09162.t1.exon8;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43481559 | 43481692 | 43481559 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
chr4.3 | exon | 43481352 | 43481453 | 43481352 | ID=MS.gene09162.t1.exon9;Parent=MS.gene09162.t1 |
chr4.3 | CDS | 43481352 | 43481453 | 43481352 | ID=cds.MS.gene09162.t1;Parent=MS.gene09162.t1 |
Gene Sequence |
Protein sequence |