AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67656


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67656.t1 MTR_2g450530 95.402 348 10 3 1 348 1 342 0.0 678
MS.gene67656.t1 MTR_2g450530 99.206 252 2 0 97 348 26 277 0.0 516
MS.gene67656.t1 MTR_3g074250 49.062 320 145 5 38 348 31 341 1.06e-100 301
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67656.t1 AT2G41040 70.033 307 86 3 46 348 48 352 5.51e-158 447
MS.gene67656.t1 AT1G78140 52.921 291 128 5 66 348 65 354 1.48e-100 301

Find 84 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTGCTGCTTTGCATTGC+TGG 0.079979 2.2:+35584141 MS.gene67656:CDS
CTGGATCTGACAGTGACTTC+TGG 0.199104 2.2:+35582844 MS.gene67656:CDS
TCCCGAAAATTTGCCAAATC+TGG 0.210877 2.2:+35583830 MS.gene67656:CDS
TTGTAAGAGCAGATGTTTCT+AGG 0.235494 2.2:+35584081 MS.gene67656:CDS
GAGGTTGGCGTCAAAATTTC+AGG 0.262886 2.2:+35583242 MS.gene67656:CDS
TTCAGGCAAAGTGGCTTTCC+TGG 0.278494 2.2:+35583259 MS.gene67656:CDS
TCTTAGTACACGGGTGATTT+CGG 0.316192 2.2:-35585601 None:intergenic
GTTACACTTCATCAACTTCC+TGG 0.317997 2.2:+35585658 MS.gene67656:CDS
TCCAGAGTAGGTTCCAGATT+TGG 0.320022 2.2:-35583843 None:intergenic
TCAATGGTTCATAACATATA+GGG 0.366384 2.2:-35582490 None:intergenic
CACTAGCAAAGACGGGTATC+TGG 0.366593 2.2:+35582825 MS.gene67656:CDS
AGGCACGAATATTGAACCTT+TGG 0.368132 2.2:-35581095 None:intergenic
ATCAATGGTTCATAACATAT+AGG 0.384751 2.2:-35582491 None:intergenic
TGGATCTGACAGTGACTTCT+GGG 0.394949 2.2:+35582845 MS.gene67656:CDS
GGCACGAATATTGAACCTTT+GGG 0.413534 2.2:-35581094 None:intergenic
GACGCCAACCTCTTTCATAT+AGG 0.414654 2.2:-35583231 None:intergenic
GAAAGTGGGATTTAGTAAAA+AGG 0.418898 2.2:-35581047 None:intergenic
TTAAGTACGAAGCAGGATAA+AGG 0.419613 2.2:+35582443 MS.gene67656:CDS
AATTGTATTTGATTATTAAG+AGG 0.422776 2.2:-35581009 None:intergenic
AGAAGTGGTGGAGTATTTGT+TGG 0.446578 2.2:+35585621 MS.gene67656:CDS
ATTGTATTTGATTATTAAGA+GGG 0.469023 2.2:-35581008 None:intergenic
CAGAGGTCTTCTCTAGGCTA+TGG 0.469989 2.2:+35586068 MS.gene67656:intron
TAGAAACATCTGCTCTTACA+AGG 0.471408 2.2:-35584079 None:intergenic
TTACACTTCATCAACTTCCT+GGG 0.474826 2.2:+35585659 MS.gene67656:CDS
GCCAAATCTGGAACCTACTC+TGG 0.475484 2.2:+35583842 MS.gene67656:CDS
ATGTTGAAGTTCAACCAAAT+CGG 0.478110 2.2:+35582878 MS.gene67656:CDS
TGCCTCCTCTGCTGTTGTTG+TGG 0.483280 2.2:+35581113 MS.gene67656:CDS
TATGAACCATTGATAAGAAA+AGG 0.483602 2.2:+35582500 MS.gene67656:CDS
GTTTCATTCCTATATGAAAG+AGG 0.483857 2.2:+35583223 MS.gene67656:CDS
AGGTCAGCAATATACAGGTC+TGG 0.485814 2.2:+35582772 MS.gene67656:intron
ATCAACTGAACTTGATTCAA+AGG 0.486667 2.2:-35584108 None:intergenic
TAATGAAATCGTAGCATTGA+CGG 0.490015 2.2:-35583898 None:intergenic
AGACATATTACTTACAGCAT+TGG 0.490607 2.2:-35584174 None:intergenic
CTTTATAATGCAGTTCAGAA+TGG 0.495463 2.2:+35583739 MS.gene67656:intron
GGAGAAGGCGAGGGCGAAAG+TGG 0.497259 2.2:-35581062 None:intergenic
ACTTCAGGTCAGCAATATAC+AGG 0.502396 2.2:+35582767 MS.gene67656:intron
CATTCCTATATGAAAGAGGT+TGG 0.503405 2.2:+35583227 MS.gene67656:CDS
CATATTACTTACAGCATTGG+AGG 0.505667 2.2:-35584171 None:intergenic
TCAGGATTTAAGTACGAAGC+AGG 0.508485 2.2:+35582436 MS.gene67656:intron
TTTGGGTTTGAGAGCGGAGA+AGG 0.511189 2.2:-35581077 None:intergenic
ACTTACAAGTTAAGACCAAC+GGG 0.516370 2.2:-35582524 None:intergenic
AGCAGCGGTAGTAGCAGAAG+CGG 0.524135 2.2:-35580968 None:intergenic
CTCCACCACTTCTTAGTACA+CGG 0.524333 2.2:-35585611 None:intergenic
AAATCGTACACTAGCAAAGA+CGG 0.529071 2.2:+35582817 MS.gene67656:CDS
TATTTGCAGAGGTCTTCTCT+AGG 0.530151 2.2:+35586062 MS.gene67656:intron
CTCCACAACAACAGCAGAGG+AGG 0.537134 2.2:-35581115 None:intergenic
GAGTACTTTGAGCCTGCTAA+AGG 0.538931 2.2:+35583767 MS.gene67656:CDS
GTCGATGTTAGCTGTGGAAG+TGG 0.544771 2.2:+35583800 MS.gene67656:CDS
TCTGAACAAGCGTGCAACCC+AGG 0.547187 2.2:-35585676 None:intergenic
CTTTCCTGGTCCTGATGAAG+AGG 0.548244 2.2:+35583273 MS.gene67656:CDS
TCAACTGAACTTGATTCAAA+GGG 0.548708 2.2:-35584107 None:intergenic
ACAATCAGACCACCTTTAGC+AGG 0.549004 2.2:-35583779 None:intergenic
CGTCAAAATTTCAGGCAAAG+TGG 0.551579 2.2:+35583250 MS.gene67656:CDS
CTTACAGCATTGGAGGGAGA+TGG 0.562732 2.2:-35584164 None:intergenic
GTTTGAGAGCGGAGAAGGCG+AGG 0.563644 2.2:-35581072 None:intergenic
AAAGACCTTTGCACTTCATG+TGG 0.564824 2.2:+35586113 MS.gene67656:CDS
TTTGATTATTAAGAGGGTGA+AGG 0.565563 2.2:-35581002 None:intergenic
TGAAGTGTAACGAAGAAAAG+TGG 0.578444 2.2:-35585646 None:intergenic
AACTTACAAGTTAAGACCAA+CGG 0.579343 2.2:-35582525 None:intergenic
TCAGTTGATGCGGTTCATGC+TGG 0.581885 2.2:+35584122 MS.gene67656:CDS
TTTGAGAGCGGAGAAGGCGA+GGG 0.588926 2.2:-35581071 None:intergenic
TTCATATAGGAATGAAACAA+GGG 0.589684 2.2:-35583218 None:intergenic
TGAATCAAGTTCAGTTGATG+CGG 0.590902 2.2:+35584112 MS.gene67656:CDS
CATACCTCTTCATCAGGACC+AGG 0.591548 2.2:-35583277 None:intergenic
TAAAGCAATTACTCCAGAGT+AGG 0.594128 2.2:-35583855 None:intergenic
TGAACCTTTGGGTTTGAGAG+CGG 0.595270 2.2:-35581083 None:intergenic
TTGATAAGAAAAGGTCCCGT+TGG 0.597047 2.2:+35582509 MS.gene67656:CDS
GAGAAGGCGAGGGCGAAAGT+GGG 0.600598 2.2:-35581061 None:intergenic
AATCGTACACTAGCAAAGAC+GGG 0.601636 2.2:+35582818 MS.gene67656:CDS
TGTTGTTGTGGAGTCTCCGT+CGG 0.604285 2.2:+35581125 MS.gene67656:CDS
TACTTTGAGCCTGCTAAAGG+TGG 0.614743 2.2:+35583770 MS.gene67656:CDS
AGAAACATCTGCTCTTACAA+GGG 0.617587 2.2:-35584078 None:intergenic
TTCTCCGCTCTCAAACCCAA+AGG 0.617708 2.2:+35581079 MS.gene67656:CDS
TTTCATATAGGAATGAAACA+AGG 0.621014 2.2:-35583219 None:intergenic
AAGGAAGAAATGAGAAGCAG+CGG 0.625762 2.2:-35580983 None:intergenic
ATATTACTTACAGCATTGGA+GGG 0.629930 2.2:-35584170 None:intergenic
ATCACCCGTGTACTAAGAAG+TGG 0.637175 2.2:+35585606 MS.gene67656:CDS
TAAGACCACATGAAGTGCAA+AGG 0.637387 2.2:-35586118 None:intergenic
ACCCGTGTACTAAGAAGTGG+TGG 0.640111 2.2:+35585609 MS.gene67656:CDS
TCCACCACTTCTTAGTACAC+GGG 0.645948 2.2:-35585610 None:intergenic
CTGATTGTCGATGTTAGCTG+TGG 0.652004 2.2:+35583794 MS.gene67656:CDS
AGACTCCACAACAACAGCAG+AGG 0.656848 2.2:-35581118 None:intergenic
TCATATAGGAATGAAACAAG+GGG 0.670366 2.2:-35583217 None:intergenic
GGTTGCACGCTTGTTCAGAG+AGG 0.670495 2.2:+35585680 MS.gene67656:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAATGTAAATCAAA+AGG - chr2.2:35585511-35585530 None:intergenic 10.0%
!! TTTCAAATCTATATATATTA+AGG - chr2.2:35585459-35585478 None:intergenic 10.0%
!!! TCTAAAATATAATAAAAAAC+AGG - chr2.2:35581530-35581549 None:intergenic 10.0%
!!! TTTTTTATTATATTTTAGAC+TGG + chr2.2:35581531-35581550 MS.gene67656:intron 10.0%
!! AAAATTATAATTTATACCGA+CGG - chr2.2:35581144-35581163 None:intergenic 15.0%
!! AATTGTATTTGATTATTAAG+AGG - chr2.2:35581012-35581031 None:intergenic 15.0%
!! ACAATTCTTATATGAAAATT+GGG - chr2.2:35585386-35585405 None:intergenic 15.0%
!! ATAAATTCAAAATCAAGTAA+AGG - chr2.2:35583962-35583981 None:intergenic 15.0%
!! ATCTATATATATTAAGGAAA+TGG - chr2.2:35585453-35585472 None:intergenic 15.0%
!! ATTGTATTTGATTATTAAGA+GGG - chr2.2:35581011-35581030 None:intergenic 15.0%
!! TAAATCAACAAATATAATTG+TGG - chr2.2:35584908-35584927 None:intergenic 15.0%
!! TACAAATATTATTCAAGTAT+GGG - chr2.2:35583334-35583353 None:intergenic 15.0%
!! TACAATTCTTATATGAAAAT+TGG - chr2.2:35585387-35585406 None:intergenic 15.0%
!! TTGAAAATTCTTTGTATTAA+AGG + chr2.2:35584283-35584302 MS.gene67656:intron 15.0%
!!! AAAAAAAACTTTTATTGAAC+GGG - chr2.2:35583527-35583546 None:intergenic 15.0%
!!! ACGTTATTTTTTTTAAAACT+CGG - chr2.2:35585312-35585331 None:intergenic 15.0%
!!! ATTTGTAGTTATTGTTTTAA+AGG + chr2.2:35583347-35583366 MS.gene67656:intron 15.0%
!!! CAAAAAAAACTTTTATTGAA+CGG - chr2.2:35583528-35583547 None:intergenic 15.0%
!! AAAAAAATAACGTAATGTGT+AGG + chr2.2:35585319-35585338 MS.gene67656:intron 20.0%
!! AAAAGTTAGTCAAAGAAAAT+TGG + chr2.2:35581460-35581479 MS.gene67656:intron 20.0%
!! AAAGGATATTGTACAAATAT+TGG - chr2.2:35583048-35583067 None:intergenic 20.0%
!! AAATGTAAATCAAAAGGATA+AGG - chr2.2:35585505-35585524 None:intergenic 20.0%
!! AACTATCATGCTAATTAATT+AGG - chr2.2:35584352-35584371 None:intergenic 20.0%
!! ATACAAAATAGATTGTTACA+TGG + chr2.2:35582921-35582940 MS.gene67656:intron 20.0%
!! ATTTCACACTATTTAAACTA+GGG + chr2.2:35585527-35585546 MS.gene67656:intron 20.0%
!! ATTTGAGAAATCACATATAT+CGG + chr2.2:35582614-35582633 MS.gene67656:intron 20.0%
!! CAATTCTTATATGAAAATTG+GGG - chr2.2:35585385-35585404 None:intergenic 20.0%
!! CACTCTTATAAACTATTATT+TGG - chr2.2:35584800-35584819 None:intergenic 20.0%
!! CTACAAATATTATTCAAGTA+TGG - chr2.2:35583335-35583354 None:intergenic 20.0%
!! CTATTAATATCAGTTTGATA+AGG - chr2.2:35585839-35585858 None:intergenic 20.0%
!! GTTAAATAGAGAAAATGAAA+AGG - chr2.2:35581173-35581192 None:intergenic 20.0%
!! TATTTCACACTATTTAAACT+AGG + chr2.2:35585526-35585545 MS.gene67656:intron 20.0%
!! TCAACAAATAAATGGAAAAA+TGG - chr2.2:35583078-35583097 None:intergenic 20.0%
!! TGGAAAAATGGATATTTAAA+AGG - chr2.2:35583066-35583085 None:intergenic 20.0%
!! TGTTATTAATTAAGCTCAAA+AGG - chr2.2:35583657-35583676 None:intergenic 20.0%
!! TTAGAAAGAATTCAAGATAT+TGG + chr2.2:35582327-35582346 MS.gene67656:intron 20.0%
!!! ACTACATGTTTTGAAAAATT+AGG - chr2.2:35585421-35585440 None:intergenic 20.0%
!!! ACTTGATTTTGAATTTATTG+CGG + chr2.2:35583964-35583983 MS.gene67656:intron 20.0%
!!! ATTTTTCCATTTATTTGTTG+AGG + chr2.2:35583077-35583096 MS.gene67656:intron 20.0%
!!! CTACATGTTTTGAAAAATTA+GGG - chr2.2:35585420-35585439 None:intergenic 20.0%
!!! GAAGTCTTTTATTATGTTTA+CGG + chr2.2:35586163-35586182 MS.gene67656:CDS 20.0%
!!! TTATTGTTTTAAAGGTGTTT+TGG + chr2.2:35583355-35583374 MS.gene67656:intron 20.0%
! AAGATATTCCCTTTCTATAA+AGG - chr2.2:35583474-35583493 None:intergenic 25.0%
! AATTCAAAATCAAGTAAAGG+AGG - chr2.2:35583959-35583978 None:intergenic 25.0%
! AATTCAAATATCCATAGAAG+TGG - chr2.2:35584588-35584607 None:intergenic 25.0%
! ACAAATGATAACTCAACAAA+AGG - chr2.2:35585798-35585817 None:intergenic 25.0%
! ACAACTAAATTTAAACCACT+TGG - chr2.2:35581335-35581354 None:intergenic 25.0%
! ACATTAAATTCATACTTCGT+TGG - chr2.2:35583990-35584009 None:intergenic 25.0%
! AGAAAAACATGTTATAGAGT+CGG + chr2.2:35582079-35582098 MS.gene67656:intron 25.0%
! AGATCACGTTAAATAAGAAA+TGG + chr2.2:35584740-35584759 MS.gene67656:intron 25.0%
! ATCAACAAATATAATTGTGG+AGG - chr2.2:35584905-35584924 None:intergenic 25.0%
! ATCAATGGTTCATAACATAT+AGG - chr2.2:35582494-35582513 None:intergenic 25.0%
! ATCATCTTGAATTAGATTCA+AGG - chr2.2:35586029-35586048 None:intergenic 25.0%
! ATGACTAATCCTTTATAGAA+AGG + chr2.2:35583462-35583481 MS.gene67656:intron 25.0%
! CAACTAAATTTAAACCACTT+GGG - chr2.2:35581334-35581353 None:intergenic 25.0%
! CAATAATGAACATCTTTAGA+AGG - chr2.2:35585769-35585788 None:intergenic 25.0%
! GATCACGTTAAATAAGAAAT+GGG + chr2.2:35584741-35584760 MS.gene67656:intron 25.0%
! GTCAAATTTCAACTTCTTAA+AGG + chr2.2:35585575-35585594 MS.gene67656:intron 25.0%
! TAGAGAAAATGAAAAGGAAA+AGG - chr2.2:35581167-35581186 None:intergenic 25.0%
! TATGAACCATTGATAAGAAA+AGG + chr2.2:35582500-35582519 MS.gene67656:CDS 25.0%
! TCAACAAATATAATTGTGGA+GGG - chr2.2:35584904-35584923 None:intergenic 25.0%
! TCAATGGTTCATAACATATA+GGG - chr2.2:35582493-35582512 None:intergenic 25.0%
! TCATCTTGAATTAGATTCAA+GGG - chr2.2:35586028-35586047 None:intergenic 25.0%
! TGACTAATCCTTTATAGAAA+GGG + chr2.2:35583463-35583482 MS.gene67656:intron 25.0%
! TTCATATAGGAATGAAACAA+GGG - chr2.2:35583221-35583240 None:intergenic 25.0%
! TTGTGTATCAGTTAACAAAA+TGG - chr2.2:35581280-35581299 None:intergenic 25.0%
! TTTATAGAAAGGGAATATCT+TGG + chr2.2:35583473-35583492 MS.gene67656:intron 25.0%
! TTTCATATAGGAATGAAACA+AGG - chr2.2:35583222-35583241 None:intergenic 25.0%
!! AAATTATTTTCCTGTCAATG+TGG + chr2.2:35585476-35585495 MS.gene67656:intron 25.0%
!! AATTATTTTCCTGTCAATGT+GGG + chr2.2:35585477-35585496 MS.gene67656:intron 25.0%
!! AGTTTGAGTTCAATTGTTAA+TGG - chr2.2:35582410-35582429 None:intergenic 25.0%
!! TCAAGTAGTATTTTGTATTG+CGG + chr2.2:35584847-35584866 MS.gene67656:intron 25.0%
!! TTAGAATTTAAGAAAGCACA+TGG - chr2.2:35584310-35584329 None:intergenic 25.0%
!! TTTTCAAAACATGTAGTCAT+GGG + chr2.2:35585424-35585443 MS.gene67656:intron 25.0%
!!! AAAGATCTTTTTATTTGCAG+AGG + chr2.2:35586051-35586070 MS.gene67656:intron 25.0%
!!! GATTTGTTAGTTTATTCATG+AGG + chr2.2:35582254-35582273 MS.gene67656:intron 25.0%
!!! GTCAAAAAAGTTGATGTATT+TGG - chr2.2:35581508-35581527 None:intergenic 25.0%
!!! TATAATTTAGTTCTTCTGCA+TGG + chr2.2:35583141-35583160 MS.gene67656:intron 25.0%
!!! TTTTTCAAAACATGTAGTCA+TGG + chr2.2:35585423-35585442 MS.gene67656:intron 25.0%
AACTTACAAGTTAAGACCAA+CGG - chr2.2:35582528-35582547 None:intergenic 30.0%
AAGTAGGGGAAATAAGAATA+AGG + chr2.2:35583409-35583428 MS.gene67656:intron 30.0%
AATTAAGGAACGAGTTAACT+TGG + chr2.2:35581204-35581223 MS.gene67656:intron 30.0%
AGACATATTACTTACAGCAT+TGG - chr2.2:35584177-35584196 None:intergenic 30.0%
AGTAGGGGAAATAAGAATAA+GGG + chr2.2:35583410-35583429 MS.gene67656:intron 30.0%
ATATGTGTGAACCTAATACA+AGG + chr2.2:35584648-35584667 MS.gene67656:intron 30.0%
ATCAACTGAACTTGATTCAA+AGG - chr2.2:35584111-35584130 None:intergenic 30.0%
ATCGGTGTAATTATATGTGT+CGG + chr2.2:35582632-35582651 MS.gene67656:intron 30.0%
ATGACCGATATTATTGTTGT+AGG + chr2.2:35584244-35584263 MS.gene67656:intron 30.0%
ATGACTGTATTGCACATTAT+AGG - chr2.2:35584935-35584954 None:intergenic 30.0%
ATGTCACCTCAACAAATAAA+TGG - chr2.2:35583086-35583105 None:intergenic 30.0%
ATGTTGAAGTTCAACCAAAT+CGG + chr2.2:35582878-35582897 MS.gene67656:CDS 30.0%
CATGCCTACAACAATAATAT+CGG - chr2.2:35584251-35584270 None:intergenic 30.0%
CTCTTAAAACTTAAGATCAG+CGG + chr2.2:35581368-35581387 MS.gene67656:intron 30.0%
CTTTATAATGCAGTTCAGAA+TGG + chr2.2:35583739-35583758 MS.gene67656:intron 30.0%
GAAAGTGGGATTTAGTAAAA+AGG - chr2.2:35581050-35581069 None:intergenic 30.0%
GGAAGAAATACAGAACTTTA+GGG - chr2.2:35581849-35581868 None:intergenic 30.0%
GGTACAAAAAGAGAGATATA+TGG - chr2.2:35583636-35583655 None:intergenic 30.0%
GTTTCATTCCTATATGAAAG+AGG + chr2.2:35583223-35583242 MS.gene67656:CDS 30.0%
TAAAAAACTGTATCGAAGGA+GGG - chr2.2:35581810-35581829 None:intergenic 30.0%
TAACGTTACACTCTGAATTA+AGG + chr2.2:35581189-35581208 MS.gene67656:intron 30.0%
TATTTAAGAACTTCACCAAG+TGG - chr2.2:35583172-35583191 None:intergenic 30.0%
TCAACTGAACTTGATTCAAA+GGG - chr2.2:35584110-35584129 None:intergenic 30.0%
TCAATCTCTATCTTCAAATG+AGG + chr2.2:35585066-35585085 MS.gene67656:intron 30.0%
TCATATAGGAATGAAACAAG+GGG - chr2.2:35583220-35583239 None:intergenic 30.0%
TGATGAAAACCACAATCTTT+GGG + chr2.2:35584202-35584221 MS.gene67656:intron 30.0%
TGGAAGAAATACAGAACTTT+AGG - chr2.2:35581850-35581869 None:intergenic 30.0%
TGTTAACTGATACACAACTA+AGG + chr2.2:35581283-35581302 MS.gene67656:intron 30.0%
TTAGGTTCACACATATATTC+TGG - chr2.2:35584644-35584663 None:intergenic 30.0%
TTATATGAAAATTGGGGTCA+CGG - chr2.2:35585379-35585398 None:intergenic 30.0%
TTGATGAAAACCACAATCTT+TGG + chr2.2:35584201-35584220 MS.gene67656:intron 30.0%
TTTGATTATTAAGAGGGTGA+AGG - chr2.2:35581005-35581024 None:intergenic 30.0%
! AGAGTCGGTATTTTATAAGT+AGG + chr2.2:35583393-35583412 MS.gene67656:intron 30.0%
! AGTCGGTATTTTATAAGTAG+GGG + chr2.2:35583395-35583414 MS.gene67656:intron 30.0%
! ATATTACTTACAGCATTGGA+GGG - chr2.2:35584173-35584192 None:intergenic 30.0%
! ATTAGCATGATAGTTTGTGT+TGG + chr2.2:35584357-35584376 MS.gene67656:intron 30.0%
! CTTTTGCTTAAAATTGAGAC+CGG - chr2.2:35581445-35581464 None:intergenic 30.0%
! GAGTCGGTATTTTATAAGTA+GGG + chr2.2:35583394-35583413 MS.gene67656:intron 30.0%
! GATGTATTTGGTCTAGATTT+TGG - chr2.2:35581496-35581515 None:intergenic 30.0%
! GATTCACAACAAATCCATTT+TGG + chr2.2:35583573-35583592 MS.gene67656:intron 30.0%
! TAATGAAATCGTAGCATTGA+CGG - chr2.2:35583901-35583920 None:intergenic 30.0%
! TGTGAATCTAGAGCAATAAA+AGG - chr2.2:35583561-35583580 None:intergenic 30.0%
! TTCCAGATTTGGCAAATTTT+CGG - chr2.2:35583835-35583854 None:intergenic 30.0%
!! ATAGTTTGTGTTGGTCATTT+TGG + chr2.2:35584366-35584385 MS.gene67656:intron 30.0%
!! CGATTTGCTTTTGTAAGAAT+CGG - chr2.2:35584482-35584501 None:intergenic 30.0%
!! TAGTTTGTGTTGGTCATTTT+GGG + chr2.2:35584367-35584386 MS.gene67656:intron 30.0%
!!! TTTTTTTAAAACTCGGTACC+CGG - chr2.2:35585305-35585324 None:intergenic 30.0%
AAACTCGCAAACAAAGTCTA+AGG + chr2.2:35581915-35581934 MS.gene67656:intron 35.0%
AAATCGTACACTAGCAAAGA+CGG + chr2.2:35582817-35582836 MS.gene67656:CDS 35.0%
AACCATGACTTTGTGTAAGT+GGG - chr2.2:35585107-35585126 None:intergenic 35.0%
AACTAAGGAACGAGTTAACT+TGG + chr2.2:35581298-35581317 MS.gene67656:intron 35.0%
AACTCGCAAACAAAGTCTAA+GGG + chr2.2:35581916-35581935 MS.gene67656:intron 35.0%
ACTGTGTCTAAACCTTTATC+AGG + chr2.2:35583191-35583210 MS.gene67656:intron 35.0%
ACTTACAAGTTAAGACCAAC+GGG - chr2.2:35582527-35582546 None:intergenic 35.0%
AGAAACATCTGCTCTTACAA+GGG - chr2.2:35584081-35584100 None:intergenic 35.0%
AGTCAAGATTTCCACTTCTA+TGG + chr2.2:35584574-35584593 MS.gene67656:intron 35.0%
AGTTCTGTATTTCTTCCACT+TGG + chr2.2:35581852-35581871 MS.gene67656:intron 35.0%
ATAGAAAGGGAATATCTTGG+AGG + chr2.2:35583476-35583495 MS.gene67656:intron 35.0%
ATTACATTTACCCCACTCTA+AGG + chr2.2:35581573-35581592 MS.gene67656:intron 35.0%
CATTCCTATATGAAAGAGGT+TGG + chr2.2:35583227-35583246 MS.gene67656:CDS 35.0%
CTAAAAAACTGTATCGAAGG+AGG - chr2.2:35581811-35581830 None:intergenic 35.0%
CTAAAAAGTTCAGTCCGATT+TGG - chr2.2:35582895-35582914 None:intergenic 35.0%
CTTAATGACTTTGCAACTTC+AGG + chr2.2:35582752-35582771 MS.gene67656:intron 35.0%
CTTTAGTTACGACAATGAAG+TGG - chr2.2:35584541-35584560 None:intergenic 35.0%
GCACAATGTCATATGATAAG+TGG - chr2.2:35584396-35584415 None:intergenic 35.0%
GGACTAAAAAACTGTATCGA+AGG - chr2.2:35581814-35581833 None:intergenic 35.0%
GGGATTTAGTAAAAAGGTGA+GGG - chr2.2:35581044-35581063 None:intergenic 35.0%
GTAGGGGAAATAAGAATAAG+GGG + chr2.2:35583411-35583430 MS.gene67656:intron 35.0%
GTGTGAGTCATTAACCAAAA+TGG - chr2.2:35583590-35583609 None:intergenic 35.0%
GTTAAATAAGAAATGGGCCT+AGG + chr2.2:35584747-35584766 MS.gene67656:intron 35.0%
TAAAGCAATTACTCCAGAGT+AGG - chr2.2:35583858-35583877 None:intergenic 35.0%
TAAAGGAGGAAAACAATACG+TGG - chr2.2:35583945-35583964 None:intergenic 35.0%
TAACAAATCATTAGCCCCAA+GGG - chr2.2:35582243-35582262 None:intergenic 35.0%
TAACCCATCAAAATTGGCAT+CGG - chr2.2:35585199-35585218 None:intergenic 35.0%
TAGAAACATCTGCTCTTACA+AGG - chr2.2:35584082-35584101 None:intergenic 35.0%
TAGACATAATCGGTTAGAGT+CGG + chr2.2:35583378-35583397 MS.gene67656:intron 35.0%
TCTGTTCATTTGAGAGTTTG+TGG + chr2.2:35583438-35583457 MS.gene67656:intron 35.0%
TGAAGTGTAACGAAGAAAAG+TGG - chr2.2:35585649-35585668 None:intergenic 35.0%
TGAGAAGTTACTATCACATG+AGG + chr2.2:35583016-35583035 MS.gene67656:intron 35.0%
TGATAACTCAACAAAAGGCA+AGG - chr2.2:35585793-35585812 None:intergenic 35.0%
TGGGATTTAGTAAAAAGGTG+AGG - chr2.2:35581045-35581064 None:intergenic 35.0%
TTAAGTACGAAGCAGGATAA+AGG + chr2.2:35582443-35582462 MS.gene67656:CDS 35.0%
TTACACTTCATCAACTTCCT+GGG + chr2.2:35585659-35585678 MS.gene67656:CDS 35.0%
TTGTAAGAGCAGATGTTTCT+AGG + chr2.2:35584081-35584100 MS.gene67656:CDS 35.0%
! AAAAAGCATACCTCTTCATC+AGG - chr2.2:35583286-35583305 None:intergenic 35.0%
! AAAACCACAATCTTTGGGTT+GGG + chr2.2:35584207-35584226 MS.gene67656:intron 35.0%
! AAATACAGAACTTTAGGGAG+GGG - chr2.2:35581844-35581863 None:intergenic 35.0%
! AGAAATACAGAACTTTAGGG+AGG - chr2.2:35581846-35581865 None:intergenic 35.0%
! ATGGACTAACCCATCAAAAT+TGG - chr2.2:35585205-35585224 None:intergenic 35.0%
! CAAATCGGACTGAACTTTTT+AGG + chr2.2:35582893-35582912 MS.gene67656:CDS 35.0%
! CATATTACTTACAGCATTGG+AGG - chr2.2:35584174-35584193 None:intergenic 35.0%
! GAAATACAGAACTTTAGGGA+GGG - chr2.2:35581845-35581864 None:intergenic 35.0%
! GCTTTGGGTGGAAAATATAT+GGG + chr2.2:35581628-35581647 MS.gene67656:intron 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr2.2:35582638-35582657 MS.gene67656:intron 35.0%
! TCCAGATTTGGCAAATTTTC+GGG - chr2.2:35583834-35583853 None:intergenic 35.0%
! TGAACTCAAACTTTTCCTTC+AGG + chr2.2:35582418-35582437 MS.gene67656:intron 35.0%
! TGAATCAAGTTCAGTTGATG+CGG + chr2.2:35584112-35584131 MS.gene67656:CDS 35.0%
! TTAGACTTTGTTTGCGAGTT+TGG - chr2.2:35581916-35581935 None:intergenic 35.0%
!! GTTGGTCTTAACTTGTAAGT+TGG + chr2.2:35582527-35582546 MS.gene67656:intron 35.0%
!!! GGTGTTTTGGTAGACATAAT+CGG + chr2.2:35583368-35583387 MS.gene67656:intron 35.0%
AAACAAAGAGCCTTAGAGTG+GGG - chr2.2:35581586-35581605 None:intergenic 40.0%
AAAGACCTTTGCACTTCATG+TGG + chr2.2:35586113-35586132 MS.gene67656:CDS 40.0%
AACAAATCATTAGCCCCAAG+GGG - chr2.2:35582242-35582261 None:intergenic 40.0%
AACCCACTTACACAAAGTCA+TGG + chr2.2:35585102-35585121 MS.gene67656:intron 40.0%
AACCCATCAAAATTGGCATC+GGG - chr2.2:35585198-35585217 None:intergenic 40.0%
AAGGAAGAAATGAGAAGCAG+CGG - chr2.2:35580986-35581005 None:intergenic 40.0%
AATCAGATATCCTCACGCAA+AGG - chr2.2:35584017-35584036 None:intergenic 40.0%
AATCGTACACTAGCAAAGAC+GGG + chr2.2:35582818-35582837 MS.gene67656:CDS 40.0%
ACTTCAGGTCAGCAATATAC+AGG + chr2.2:35582767-35582786 MS.gene67656:intron 40.0%
AGGCACGAATATTGAACCTT+TGG - chr2.2:35581098-35581117 None:intergenic 40.0%
ATCAGATATCCTCACGCAAA+GGG - chr2.2:35584016-35584035 None:intergenic 40.0%
CAAACAAAGAGCCTTAGAGT+GGG - chr2.2:35581587-35581606 None:intergenic 40.0%
CAAAGTTACGTATGCACGTT+AGG + chr2.2:35585008-35585027 MS.gene67656:intron 40.0%
CAACATGTTGAATGCAAGTC+CGG + chr2.2:35582197-35582216 MS.gene67656:intron 40.0%
CAACCATGACTTTGTGTAAG+TGG - chr2.2:35585108-35585127 None:intergenic 40.0%
CACTTACACAAAGTCATGGT+TGG + chr2.2:35585106-35585125 MS.gene67656:intron 40.0%
CGTCAAAATTTCAGGCAAAG+TGG + chr2.2:35583250-35583269 MS.gene67656:CDS 40.0%
CTAACAAATCATTAGCCCCA+AGG - chr2.2:35582244-35582263 None:intergenic 40.0%
CTAAGATGACACCTCATGAA+CGG + chr2.2:35585935-35585954 MS.gene67656:intron 40.0%
GAAAACCACAATCTTTGGGT+TGG + chr2.2:35584206-35584225 MS.gene67656:intron 40.0%
GACTTTATGACCTCAAGAGA+CGG - chr2.2:35585903-35585922 None:intergenic 40.0%
GCTTCGTACTTAAATCCTGA+AGG - chr2.2:35582436-35582455 None:intergenic 40.0%
GGAAAAATAGAAGGACCAAG+TGG - chr2.2:35581870-35581889 None:intergenic 40.0%
GGCACGAATATTGAACCTTT+GGG - chr2.2:35581097-35581116 None:intergenic 40.0%
GTGCATTACAACTACAATGC+TGG - chr2.2:35583312-35583331 None:intergenic 40.0%
GTTACACTTCATCAACTTCC+TGG + chr2.2:35585658-35585677 MS.gene67656:CDS 40.0%
TAAGACCACATGAAGTGCAA+AGG - chr2.2:35586121-35586140 None:intergenic 40.0%
TAGTCAATACTCCGTTCATG+AGG - chr2.2:35585949-35585968 None:intergenic 40.0%
TAGTTCTCTTAGGGTGTGTT+TGG - chr2.2:35582160-35582179 None:intergenic 40.0%
TATGCATGAGCTATGAAGCA+CGG + chr2.2:35582555-35582574 MS.gene67656:intron 40.0%
TATTTGCAGAGGTCTTCTCT+AGG + chr2.2:35586062-35586081 MS.gene67656:intron 40.0%
TCAGGATTTAAGTACGAAGC+AGG + chr2.2:35582436-35582455 MS.gene67656:intron 40.0%
TCCCGAAAATTTGCCAAATC+TGG + chr2.2:35583830-35583849 MS.gene67656:CDS 40.0%
TCTTAGTACACGGGTGATTT+CGG - chr2.2:35585604-35585623 None:intergenic 40.0%
TGCTTAAAATTGAGACCGGA+GGG - chr2.2:35581441-35581460 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr2.2:35581939-35581958 MS.gene67656:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr2.2:35581958-35581939 None:intergenic 40.0%
TTAGGGTGTGTTTGGATTGA+GGG - chr2.2:35582152-35582171 None:intergenic 40.0%
TTGATAAGAAAAGGTCCCGT+TGG + chr2.2:35582509-35582528 MS.gene67656:CDS 40.0%
TTGCTAGCACTCCTTGTATT+AGG - chr2.2:35584662-35584681 None:intergenic 40.0%
TTGCTTAAAATTGAGACCGG+AGG - chr2.2:35581442-35581461 None:intergenic 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr2.2:35581943-35581962 MS.gene67656:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr2.2:35581962-35581943 None:intergenic 40.0%
! AATACAGAACTTTAGGGAGG+GGG - chr2.2:35581843-35581862 None:intergenic 40.0%
! ACAAAGTCTAAGGGTGTGTT+TGG + chr2.2:35581925-35581944 MS.gene67656:intron 40.0%
! ACGGGACCTTTTCTTATCAA+TGG - chr2.2:35582509-35582528 None:intergenic 40.0%
! ACTTTGTTTGCGAGTTTGGA+GGG - chr2.2:35581912-35581931 None:intergenic 40.0%
! AGAAGTGGTGGAGTATTTGT+TGG + chr2.2:35585621-35585640 MS.gene67656:CDS 40.0%
! CTCTTTGTTTGGGAGTTTGA+AGG + chr2.2:35581596-35581615 MS.gene67656:intron 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr2.2:35581933-35581952 MS.gene67656:intron 40.0%
!! AAACCACAATCTTTGGGTTG+GGG + chr2.2:35584208-35584227 MS.gene67656:intron 40.0%
!! AGTAAAAAGGTGAGGGCATT+TGG - chr2.2:35581037-35581056 None:intergenic 40.0%
!! CACTCTAAGGCTCTTTGTTT+GGG + chr2.2:35581586-35581605 MS.gene67656:intron 40.0%
!! GAGGGCTTTGGAAAAATAGA+AGG - chr2.2:35581879-35581898 None:intergenic 40.0%
!! GGCTTTGGGTGGAAAATATA+TGG + chr2.2:35581627-35581646 MS.gene67656:intron 40.0%
!! GTAAAAAGGTGAGGGCATTT+GGG - chr2.2:35581036-35581055 None:intergenic 40.0%
!! TAAAAAGGTGAGGGCATTTG+GGG - chr2.2:35581035-35581054 None:intergenic 40.0%
!!! GAGTATCGAACCTGAGATTT+TGG - chr2.2:35585175-35585194 None:intergenic 40.0%
!!! GTCTTGGGATTTTAGAGTGT+GGG + chr2.2:35585141-35585160 MS.gene67656:intron 40.0%
!!! TGTCTTGGGATTTTAGAGTG+TGG + chr2.2:35585140-35585159 MS.gene67656:intron 40.0%
AACAAGGGGACTCCTGATAA+AGG - chr2.2:35583206-35583225 None:intergenic 45.0%
AATGCACTATGAAGCACGGA+CGG - chr2.2:35582677-35582696 None:intergenic 45.0%
ACAACAGTGTCTAGTGTCTG+AGG + chr2.2:35585866-35585885 MS.gene67656:intron 45.0%
ACAATCAGACCACCTTTAGC+AGG - chr2.2:35583782-35583801 None:intergenic 45.0%
ACACACCCTAAGAGAACTAG+TGG + chr2.2:35582161-35582180 MS.gene67656:intron 45.0%
ACATCACACAAAGGAAGCTG+CGG + chr2.2:35583610-35583629 MS.gene67656:intron 45.0%
ACCCATCAAAATTGGCATCG+GGG - chr2.2:35585197-35585216 None:intergenic 45.0%
AGCCAGAGCAATGCTATGTA+TGG - chr2.2:35585224-35585243 None:intergenic 45.0%
AGCTAGAGGTTTCCTTCCTT+TGG - chr2.2:35581407-35581426 None:intergenic 45.0%
AGCTTAGTAAGTACTCCCTC+CGG + chr2.2:35581423-35581442 MS.gene67656:intron 45.0%
AGGTCAGCAATATACAGGTC+TGG + chr2.2:35582772-35582791 MS.gene67656:intron 45.0%
ATCACCCGTGTACTAAGAAG+TGG + chr2.2:35585606-35585625 MS.gene67656:CDS 45.0%
ATGGGCCTAGGCTATTTACT+TGG + chr2.2:35584759-35584778 MS.gene67656:intron 45.0%
CCAAACAAAGAGCCTTAGAG+TGG - chr2.2:35581588-35581607 None:intergenic 45.0%
CCCTAATGCACTATGAAGCA+CGG - chr2.2:35582681-35582700 None:intergenic 45.0%
CCGTGCTTCATAGTGCATTA+GGG + chr2.2:35582678-35582697 MS.gene67656:intron 45.0%
CTCCACCACTTCTTAGTACA+CGG - chr2.2:35585614-35585633 None:intergenic 45.0%
CTCTATTAGACCAACCCCTT+GGG + chr2.2:35582225-35582244 MS.gene67656:intron 45.0%
CTGATTGTCGATGTTAGCTG+TGG + chr2.2:35583794-35583813 MS.gene67656:CDS 45.0%
CTTAGGGTGTGTTTGGATTG+AGG - chr2.2:35582153-35582172 None:intergenic 45.0%
GACGCCAACCTCTTTCATAT+AGG - chr2.2:35583234-35583253 None:intergenic 45.0%
GACTCACACACATCACACAA+AGG + chr2.2:35583601-35583620 MS.gene67656:intron 45.0%
GAGGTTGGCGTCAAAATTTC+AGG + chr2.2:35583242-35583261 MS.gene67656:CDS 45.0%
GAGTACTTTGAGCCTGCTAA+AGG + chr2.2:35583767-35583786 MS.gene67656:CDS 45.0%
GCTTCATAGTGCATTAGGGA+AGG + chr2.2:35582682-35582701 MS.gene67656:intron 45.0%
GGTCACGGAAAGAAATTTGG+AGG - chr2.2:35585364-35585383 None:intergenic 45.0%
GTCCATACATAGCATTGCTC+TGG + chr2.2:35585219-35585238 MS.gene67656:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr2.2:35581942-35581961 MS.gene67656:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr2.2:35581961-35581942 None:intergenic 45.0%
TAATGTTTCCCCTTTGCGTG+AGG + chr2.2:35584004-35584023 MS.gene67656:intron 45.0%
TACTTTGAGCCTGCTAAAGG+TGG + chr2.2:35583770-35583789 MS.gene67656:CDS 45.0%
TCAGATATCCTCACGCAAAG+GGG - chr2.2:35584015-35584034 None:intergenic 45.0%
TCCACCACTTCTTAGTACAC+GGG - chr2.2:35585613-35585632 None:intergenic 45.0%
TCCAGAGTAGGTTCCAGATT+TGG - chr2.2:35583846-35583865 None:intergenic 45.0%
TCCGTGCTTCATAGTGCATT+AGG + chr2.2:35582677-35582696 MS.gene67656:intron 45.0%
TCGCTCCAAGTAAATAGCCT+AGG - chr2.2:35584767-35584786 None:intergenic 45.0%
TCTATTAGACCAACCCCTTG+GGG + chr2.2:35582226-35582245 MS.gene67656:intron 45.0%
TGACACTCTAGTCCAAAGGA+AGG + chr2.2:35581392-35581411 MS.gene67656:intron 45.0%
TGAGCTATGAAGCACGGATA+CGG + chr2.2:35582561-35582580 MS.gene67656:intron 45.0%
TGGATCTGACAGTGACTTCT+GGG + chr2.2:35582845-35582864 MS.gene67656:CDS 45.0%
TGGGGTCACGGAAAGAAATT+TGG - chr2.2:35585367-35585386 None:intergenic 45.0%
TTACGGCTCAGAAGCCATAA+TGG + chr2.2:35586180-35586199 MS.gene67656:CDS 45.0%
TTCTGCATGGTTCAACCACT+TGG + chr2.2:35583154-35583173 MS.gene67656:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr2.2:35581944-35581963 MS.gene67656:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr2.2:35581963-35581944 None:intergenic 45.0%
TTGGATTGTTCTTGCCCAAG+TGG + chr2.2:35581317-35581336 MS.gene67656:intron 45.0%
TTGGTCTAATAGAGCAGGAC+CGG - chr2.2:35582219-35582238 None:intergenic 45.0%
! ACTGTATCGAAGGAGGGTTT+TGG - chr2.2:35581804-35581823 None:intergenic 45.0%
! ATACAGAACTTTAGGGAGGG+GGG - chr2.2:35581842-35581861 None:intergenic 45.0%
! CTAAGGGTGTGTTTGGATTG+AGG + chr2.2:35581932-35581951 MS.gene67656:intron 45.0%
! CTCCTCCACTAGTTCTCTTA+GGG - chr2.2:35582169-35582188 None:intergenic 45.0%
! CTGTATCGAAGGAGGGTTTT+GGG - chr2.2:35581803-35581822 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr2.2:35581911-35581930 None:intergenic 45.0%
! GACTTTGTTTGCGAGTTTGG+AGG - chr2.2:35581913-35581932 None:intergenic 45.0%
! GATAAGGTACCCACATTGAC+AGG - chr2.2:35585489-35585508 None:intergenic 45.0%
! TCTCCTCCACTAGTTCTCTT+AGG - chr2.2:35582170-35582189 None:intergenic 45.0%
! TGAACCTTTGGGTTTGAGAG+CGG - chr2.2:35581086-35581105 None:intergenic 45.0%
! TGTATCGAAGGAGGGTTTTG+GGG - chr2.2:35581802-35581821 None:intergenic 45.0%
!! AACCACAATCTTTGGGTTGG+GGG + chr2.2:35584209-35584228 MS.gene67656:intron 45.0%
!! AGCATTGCTCTGGCTTTACA+TGG + chr2.2:35585229-35585248 MS.gene67656:intron 45.0%
!! ATCGAACCTGAGATTTTGGC+AGG - chr2.2:35585171-35585190 None:intergenic 45.0%
!! ATTGCTCTGGCTTTACATGG+GGG + chr2.2:35585232-35585251 MS.gene67656:intron 45.0%
!! CATTGCTCTGGCTTTACATG+GGG + chr2.2:35585231-35585250 MS.gene67656:intron 45.0%
!! CCACTCTAAGGCTCTTTGTT+TGG + chr2.2:35581585-35581604 MS.gene67656:intron 45.0%
!! GCATTGCTCTGGCTTTACAT+GGG + chr2.2:35585230-35585249 MS.gene67656:intron 45.0%
!! GGGAGTACTTACTAAGCTAG+AGG - chr2.2:35581421-35581440 None:intergenic 45.0%
!! TCCCCGATGCCAATTTTGAT+GGG + chr2.2:35585193-35585212 MS.gene67656:intron 45.0%
AATCATTAGCCCCAAGGGGT+TGG - chr2.2:35582238-35582257 None:intergenic 50.0%
ACCCGTGTACTAAGAAGTGG+TGG + chr2.2:35585609-35585628 MS.gene67656:CDS 50.0%
AGACTCCACAACAACAGCAG+AGG - chr2.2:35581121-35581140 None:intergenic 50.0%
AGGCACAATGTTGACGACTC+AGG - chr2.2:35585749-35585768 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr2.2:35581967-35581948 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+GGG + chr2.2:35581948-35581967 MS.gene67656:intron 50.0%
CACCCTAAGAGAACTAGTGG+AGG + chr2.2:35582164-35582183 MS.gene67656:intron 50.0%
CACTAGCAAAGACGGGTATC+TGG + chr2.2:35582825-35582844 MS.gene67656:CDS 50.0%
CAGAGGTCTTCTCTAGGCTA+TGG + chr2.2:35586068-35586087 MS.gene67656:intron 50.0%
CAGTGTCTAGTGTCTGAGGA+TGG + chr2.2:35585870-35585889 MS.gene67656:intron 50.0%
CATACCTCTTCATCAGGACC+AGG - chr2.2:35583280-35583299 None:intergenic 50.0%
CGGATGACACTCTAGTCCAA+AGG + chr2.2:35581388-35581407 MS.gene67656:intron 50.0%
CTGGATCTGACAGTGACTTC+TGG + chr2.2:35582844-35582863 MS.gene67656:CDS 50.0%
CTTTCCTGGTCCTGATGAAG+AGG + chr2.2:35583273-35583292 MS.gene67656:CDS 50.0%
GCTCTATTAGACCAACCCCT+TGG + chr2.2:35582224-35582243 MS.gene67656:intron 50.0%
GTCGATGTTAGCTGTGGAAG+TGG + chr2.2:35583800-35583819 MS.gene67656:CDS 50.0%
GTTTGGGAGTTTGAAGGCGA+AGG + chr2.2:35581602-35581621 MS.gene67656:intron 50.0%
TACCCCCAACCCAAAGATTG+TGG - chr2.2:35584214-35584233 None:intergenic 50.0%
TGGTTGAACTCCGTCTCTTG+AGG + chr2.2:35585890-35585909 MS.gene67656:intron 50.0%
TGTTGTTGTGGAGTCTCCGT+CGG + chr2.2:35581125-35581144 MS.gene67656:CDS 50.0%
TTCAGGCAAAGTGGCTTTCC+TGG + chr2.2:35583259-35583278 MS.gene67656:CDS 50.0%
TTCTCCGCTCTCAAACCCAA+AGG + chr2.2:35581079-35581098 MS.gene67656:CDS 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr2.2:35582136-35582155 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr2.2:35581906-35581925 None:intergenic 50.0%
! ACACAAAGTCATGGTTGGCC+TGG + chr2.2:35585111-35585130 MS.gene67656:intron 50.0%
! CTCCCCGATGCCAATTTTGA+TGG + chr2.2:35585192-35585211 MS.gene67656:intron 50.0%
! CTTACAGCATTGGAGGGAGA+TGG - chr2.2:35584167-35584186 None:intergenic 50.0%
! GCCAAATCTGGAACCTACTC+TGG + chr2.2:35583842-35583861 MS.gene67656:CDS 50.0%
! TACAGAACTTTAGGGAGGGG+GGG - chr2.2:35581841-35581860 None:intergenic 50.0%
! TCAGTTGATGCGGTTCATGC+TGG + chr2.2:35584122-35584141 MS.gene67656:CDS 50.0%
! TTGGATTGGACCCCTCGAAT+CGG + chr2.2:35585271-35585290 MS.gene67656:intron 50.0%
! TTTGGGTTTGAGAGCGGAGA+AGG - chr2.2:35581080-35581099 None:intergenic 50.0%
!! AAAGTCATGGTTGGCCTGGT+GGG + chr2.2:35585115-35585134 MS.gene67656:intron 50.0%
!! AGGGGTTGGTCTAATAGAGC+AGG - chr2.2:35582224-35582243 None:intergenic 50.0%
!! GTATCGAAGGAGGGTTTTGG+GGG - chr2.2:35581801-35581820 None:intergenic 50.0%
AAAACTCGGTACCCGGCACA+AGG - chr2.2:35585298-35585317 None:intergenic 55.0%
AATCCCAAGACAACCCCACC+AGG - chr2.2:35585132-35585151 None:intergenic 55.0%
AGCAGCGGTAGTAGCAGAAG+CGG - chr2.2:35580971-35580990 None:intergenic 55.0%
AGCAGTGTCTGTGTCGTGTC+CGG - chr2.2:35582590-35582609 None:intergenic 55.0%
CTCCACAACAACAGCAGAGG+AGG - chr2.2:35581118-35581137 None:intergenic 55.0%
GATTGAGGGTTTAGGAGGGG+AGG + chr2.2:35581947-35581966 MS.gene67656:intron 55.0%
GGGAGTTTGAAGGCGAAGGA+GGG + chr2.2:35581606-35581625 MS.gene67656:intron 55.0%
GGTGCTCCTGCCAAAATCTC+AGG + chr2.2:35585162-35585181 MS.gene67656:intron 55.0%
GGTTGCACGCTTGTTCAGAG+AGG + chr2.2:35585680-35585699 MS.gene67656:CDS 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr2.2:35581907-35581926 None:intergenic 55.0%
TCTGAACAAGCGTGCAACCC+AGG - chr2.2:35585679-35585698 None:intergenic 55.0%
TGAAGCACGGATACGGACAC+CGG + chr2.2:35582568-35582587 MS.gene67656:intron 55.0%
TGAAGGCGAAGGAGGGCTTT+GGG + chr2.2:35581613-35581632 MS.gene67656:intron 55.0%
TGCCTCCTCTGCTGTTGTTG+TGG + chr2.2:35581113-35581132 MS.gene67656:CDS 55.0%
TGGGAGTTTGAAGGCGAAGG+AGG + chr2.2:35581605-35581624 MS.gene67656:intron 55.0%
TTGAAGGCGAAGGAGGGCTT+TGG + chr2.2:35581612-35581631 MS.gene67656:intron 55.0%
TTTGAGAGCGGAGAAGGCGA+GGG - chr2.2:35581074-35581093 None:intergenic 55.0%
! ACAGAACTTTAGGGAGGGGG+GGG - chr2.2:35581840-35581859 None:intergenic 55.0%
!! AAGTCATGGTTGGCCTGGTG+GGG + chr2.2:35585116-35585135 MS.gene67656:intron 55.0%
!! CAAAGTCATGGTTGGCCTGG+TGG + chr2.2:35585114-35585133 MS.gene67656:intron 55.0%
!! CTGGTGCTGCTTTGCATTGC+TGG + chr2.2:35584141-35584160 MS.gene67656:CDS 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr2.2:35582133-35582152 None:intergenic 60.0%
CCTCGAATCGGTCCTTGTGC+CGG + chr2.2:35585283-35585302 MS.gene67656:intron 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr2.2:35581902-35581921 None:intergenic 60.0%
CTCGAATCGGTCCTTGTGCC+GGG + chr2.2:35585284-35585303 MS.gene67656:intron 60.0%
GAGAAGGCGAGGGCGAAAGT+GGG - chr2.2:35581064-35581083 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr2.2:35581901-35581920 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr2.2:35582132-35582151 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr2.2:35582131-35582150 None:intergenic 60.0%
GTTTGAGAGCGGAGAAGGCG+AGG - chr2.2:35581075-35581094 None:intergenic 60.0%
TGGCCTGGTGGGGTTGTCTT+GGG + chr2.2:35585126-35585145 MS.gene67656:intron 60.0%
TTGGCCTGGTGGGGTTGTCT+TGG + chr2.2:35585125-35585144 MS.gene67656:intron 60.0%
! AGAACTTTAGGGAGGGGGGG+GGG - chr2.2:35581838-35581857 None:intergenic 60.0%
! CAGAACTTTAGGGAGGGGGG+GGG - chr2.2:35581839-35581858 None:intergenic 60.0%
!! CGGCACAAGGACCGATTCGA+GGG - chr2.2:35585285-35585304 None:intergenic 60.0%
!! GGCACAAGGACCGATTCGAG+GGG - chr2.2:35585284-35585303 None:intergenic 60.0%
!!! TCGAAGGAGGGTTTTGGGGG+TGG - chr2.2:35581798-35581817 None:intergenic 60.0%
GAAGCACGGACGGACACGTG+TGG - chr2.2:35582667-35582686 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr2.2:35581903-35581922 None:intergenic 65.0%
GGAGAAGGCGAGGGCGAAAG+TGG - chr2.2:35581065-35581084 None:intergenic 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr2.2:35582127-35582146 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr2.2:35582128-35582147 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr2.2:35581897-35581916 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr2.2:35581898-35581917 None:intergenic 65.0%
! AACTTTAGGGAGGGGGGGGG+GGG - chr2.2:35581836-35581855 None:intergenic 65.0%
! GAACTTTAGGGAGGGGGGGG+GGG - chr2.2:35581837-35581856 None:intergenic 65.0%
!! AGGCGAAGGAGGGCTTTGGG+TGG + chr2.2:35581616-35581635 MS.gene67656:intron 65.0%
!! CCGGCACAAGGACCGATTCG+AGG - chr2.2:35585286-35585305 None:intergenic 65.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr2.2:35581891-35581910 None:intergenic 70.0%
! ACTTTAGGGAGGGGGGGGGG+GGG - chr2.2:35581835-35581854 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 35580964 35586199 35580964 ID=MS.gene67656
chr2.2 mRNA 35580964 35586199 35580964 ID=MS.gene67656.t1;Parent=MS.gene67656
chr2.2 exon 35580964 35581146 35580964 ID=MS.gene67656.t1.exon1;Parent=MS.gene67656.t1
chr2.2 CDS 35580964 35581146 35580964 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35582440 35582540 35582440 ID=MS.gene67656.t1.exon2;Parent=MS.gene67656.t1
chr2.2 CDS 35582440 35582540 35582440 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35582774 35582914 35582774 ID=MS.gene67656.t1.exon3;Parent=MS.gene67656.t1
chr2.2 CDS 35582774 35582914 35582774 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35583213 35583294 35583213 ID=MS.gene67656.t1.exon4;Parent=MS.gene67656.t1
chr2.2 CDS 35583213 35583294 35583213 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35583752 35583945 35583752 ID=MS.gene67656.t1.exon5;Parent=MS.gene67656.t1
chr2.2 CDS 35583752 35583945 35583752 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35584070 35584181 35584070 ID=MS.gene67656.t1.exon6;Parent=MS.gene67656.t1
chr2.2 CDS 35584070 35584181 35584070 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35585597 35585701 35585597 ID=MS.gene67656.t1.exon7;Parent=MS.gene67656.t1
chr2.2 CDS 35585597 35585701 35585597 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
chr2.2 exon 35586071 35586199 35586071 ID=MS.gene67656.t1.exon8;Parent=MS.gene67656.t1
chr2.2 CDS 35586071 35586199 35586071 ID=cds.MS.gene67656.t1;Parent=MS.gene67656.t1
Gene Sequence

>MS.gene67656

ATGGCCGCTTCTGCTACTACCGCTGCTTCTCATTTCTTCCTTCACCCTCTTAATAATCAAATACAATTCCCCAAATGCCCTCACCTTTTTACTAAATCCCACTTTCGCCCTCGCCTTCTCCGCTCTCAAACCCAAAGGTTCAATATTCGTGCCTCCTCTGCTGTTGTTGTGGAGTCTCCGTCGGTATAAATTATAATTTTCCTTTTCCTTTTCATTTTCTCTATTTAACGTTACACTCTGAATTAAGGAACGAGTTAACTTGGATTGTTATTGTCATGTAATTAAGCTTATATGTTTTTTTAGATTAGTTTATCCATTTTGTTAACTGATACACAACTAAGGAACGAGTTAACTTGGATTGTTCTTGCCCAAGTGGTTTAAATTTAGTTGTACAAATATCGTTTCTCTTAAAACTTAAGATCAGCGGATGACACTCTAGTCCAAAGGAAGGAAACCTCTAGCTTAGTAAGTACTCCCTCCGGTCTCAATTTTAAGCAAAAGTTAGTCAAAGAAAATTGGTATATTTAGTCCAAAATCTAGACCAAATACATCAACTTTTTTGACCTGTTTTTTATTATATTTTAGACTGGAGTACTACTTACAAACTAAATTACATTTACCCCACTCTAAGGCTCTTTGTTTGGGAGTTTGAAGGCGAAGGAGGGCTTTGGGTGGAAAATATATGGGAAAATAGAGAAATCTTTCACATTTTTTGAAAGAATGTTTTTATAGAGAATGATAAATTAACGCTTATGATTAATATATTTTTAATTTCAACAATATTATAACAACATAGATTGAATTTAAAGAATTCATATAAATCATCTAAAACCACCCCCAAAACCCTCCTTCGATACAGTTTTTTAGTCCCCCCCCCCCCCTCCCTAAAGTTCTGTATTTCTTCCACTTGGTCCTTCTATTTTTCCAAAGCCCTCCCCTCCCTTCCCCTCCAAACTCGCAAACAAAGTCTAAGGGTGTGTTTGGATTGAGGGTTTAGGAGGGGAGGGTTTGATTTTCATTCTTAATTTACAAACACTATGAAATGTTTTTTAAAAAGTTAACATATTAACATGATAAACAATCATATAATACTTCAATCACACTTAATTTATTTTAGAAAAACATGTTATAGAGTCGGTAATTTTAAAAAGAAAATCAAACCCTCCCCTCCCTTCCCCTCCTAAACCCTCAATCCAAACACACCCTAAGAGAACTAGTGGAGGAGACTTGAATCAACATGTTGAATGCAAGTCCGGTCCTGCTCTATTAGACCAACCCCTTGGGGCTAATGATTTGTTAGTTTATTCATGAGGTGATCTTGCTCTTTTTCAACGCATTGTCTTTAAGTACATTGATATTTTGATTAGAAAGAATTCAAGATATTGGCAATTCAGTAAATTCAACAAGTATTATTTGTTTTGCTGATATAAATTTATATCAATTCCATTAACAATTGAACTCAAACTTTTCCTTCAGGATTTAAGTACGAAGCAGGATAAAGGAACACAAGTTGACTTATTCGCATGCCCTATATGTTATGAACCATTGATAAGAAAAGGTCCCGTTGGTCTTAACTTGTAAGTTGGCTTTATATGCATGAGCTATGAAGCACGGATACGGACACCGGACACGACACAGACACTGCTATTAATTTGAGAAATCACATATATCGGTGTAATTATATGTGTCGGTGTCGGATACCACACGTGTCCGTCCGTGCTTCATAGTGCATTAGGGAAGGTGTGTTCAGTTCTTTTTGTCACTAAAATCACGTCTCATTGTAATTTACTTAATGACTTTGCAACTTCAGGTCAGCAATATACAGGTCTGGTTTCAAGTGTAAGAGATGTCAAAAATCGTACACTAGCAAAGACGGGTATCTGGATCTGACAGTGACTTCTGGGTTGAGAGATTATGTTGAAGTTCAACCAAATCGGACTGAACTTTTTAGGTATAAATACAAAATAGATTGTTACATGGCATTATATTATATCATCTTGTATGAAGATCTCGTGATACTATATATTTTTCATATTAGTTGTATATACTTGATGAGAAGTTACTATCACATGAGGTACATACCAATATTTGTACAATATCCTTTTAAATATCCATTTTTCCATTTATTTGTTGAGGTGACATTTATGAGTTATTGTTCAAACATATTTGACACAAGTTATAATTTAGTTCTTCTGCATGGTTCAACCACTTGGTGAAGTTCTTAAATACTGTGTCTAAACCTTTATCAGGAGTCCCCTTGTTTCATTCCTATATGAAAGAGGTTGGCGTCAAAATTTCAGGCAAAGTGGCTTTCCTGGTCCTGATGAAGAGGTATGCTTTTTGTACCAGCATTGTAGTTGTAATGCACCCATACTTGAATAATATTTGTAGTTATTGTTTTAAAGGTGTTTTGGTAGACATAATCGGTTAGAGTCGGTATTTTATAAGTAGGGGAAATAAGAATAAGGGGACATTCTGTTCATTTGAGAGTTTGTGGTATGACTAATCCTTTATAGAAAGGGAATATCTTGGAGGAGAGATCTCTCTGCAATTTTATTCACCCGTTCAATAAAAGTTTTTTTTGTTTGTTTCTGCCTTTTATTGCTCTAGATTCACAACAAATCCATTTTGGTTAATGACTCACACACATCACACAAAGGAAGCTGCGGCCATATATCTCTCTTTTTGTACCTTTTGAGCTTAATTAATAACATTTCAATATATTCTTAAGCACTTTTTCAAAATATATATATATTGCTGAGCACTTCATATTTTCTTTATAATGCAGTTCAGAATGGCTCAAGAGTACTTTGAGCCTGCTAAAGGTGGTCTGATTGTCGATGTTAGCTGTGGAAGTGGTCTATTTTCCCGAAAATTTGCCAAATCTGGAACCTACTCTGGAGTAATTGCTTTAGATTTTTCTGAAAATATGCTCCGTCAATGCTACGATTTCATTAAGAAAGATGACACACTATCAACCACGTATTGTTTTCCTCCTTTACTTGATTTTGAATTTATTGCGGCCAACGAAGTATGAATTTAATGTTTCCCCTTTGCGTGAGGATATCTGATTGTGCTTAATACAAATTCATTTCTTTGTTTGCAGTAATCTTGCCCTTGTAAGAGCAGATGTTTCTAGGCTTCCCTTTGAATCAAGTTCAGTTGATGCGGTTCATGCTGGTGCTGCTTTGCATTGCTGGCCATCTCCCTCCAATGCTGTAAGTAATATGTCTTAGTTTGATGAAAACCACAATCTTTGGGTTGGGGGTACACTTTTAGAATGACCGATATTATTGTTGTAGGCATGCATATTAAAATCTTGAAAATTCTTTGTATTAAAGGACCATGTGCTTTCTTAAATTCTAAACAAGTGTGTCTCTGATTGCCTAATTAATTAGCATGATAGTTTGTGTTGGTCATTTTGGGTTACCACTTATCATATGACATTGTGCTGCATTTTGTGTAGAACTTTTTGCAGACTTTATCATTTGTGCTTCAAGCTAATATATTTTATGCCGATTCTTACAAAAGCAAATCGATTTTTAATTGATTACTCTTAAGTTTTAAATGTTTACCACTTCATTGTCGTAACTAAAGTTCTGATTCACAAAGTCAAGATTTCCACTTCTATGGATATTTGAATTCAACTTAAATATATTTCTGTTTTATAATATTGTCCAGAATATATGTGTGAACCTAATACAAGGAGTGCTAGCAACTTATTGTTTGACACATTTTCTTATACTTTCAAATGTTGTTTTTTTTTTTTTTTGTATAGATCACGTTAAATAAGAAATGGGCCTAGGCTATTTACTTGGAGCGAATAAAATTCACCAAATAATAGTTTATAAGAGTGATCTAATGAGTGTGTTGTATGTATTTCTCAAGTAGTATTTTGTATTGCGGCAGATGTGCATAAGTAAAAATAGTTCTTGTTCCCTCCACAATTATATTTGTTGATTTACATGCCTATAATGTGCAATACAGTCATGATACTTGCAAACAGACATTTTTTTTTGTGTTTATACTATGCACGTTTATACACAAAGTTACGTATGCACGTTAGGTATAAAGTTAGTTAATAATGTAACAAATCTATGACTCAATCTCTATCTTCAAATGAGGATTTTAGTTGTGTAACCCACTTACACAAAGTCATGGTTGGCCTGGTGGGGTTGTCTTGGGATTTTAGAGTGTGGGTGCTCCTGCCAAAATCTCAGGTTCGATACTCCCCGATGCCAATTTTGATGGGTTAGTCCATACATAGCATTGCTCTGGCTTTACATGGGGGCCCCACAAGTGGACGGTTGGATTGGACCCCTCGAATCGGTCCTTGTGCCGGGTACCGAGTTTTAAAAAAAATAACGTAATGTGTAGGTGCTCTAGTTATATGTACTCCTCCAAATTTCTTTCCGTGACCCCAATTTTCATATAAGAATTGTATTTGTATTTTCCCTAATTTTTCAAAACATGTAGTCATGGGATACCATTTCCTTAATATATATAGATTTGAAATTATTTTCCTGTCAATGTGGGTACCTTATCCTTTTGATTTACATTTATATTTCACACTATTTAAACTAGGGTAATTACTAATTTGTATAATGACACGTCAAATTTCAACTTCTTAAAGGTTGCCGAAATCACCCGTGTACTAAGAAGTGGTGGAGTATTTGTTGGAACCACTTTTCTTCGTTACACTTCATCAACTTCCTGGGTTGCACGCTTGTTCAGAGAGGTAAACTCTTTATAATAATGATCTTTTATCTTTTGTCATAATAACCTGAGTCGTCAACATTGTGCCTTCTAAAGATGTTCATTATTGACCTTGCCTTTTGTTGAGTTATCATTTGTAATGATGACTACTTTTTTCCTTATCAAACTGATATTAATAGTCATTTTACAACAGTGTCTAGTGTCTGAGGATGGTTGAACTCCGTCTCTTGAGGTCATAAAGTCATGCTCTTAACACTAAGATGACACCTCATGAACGGAGTATTGACTACTTGATCATCTCATAAATCTACAAATGATATATATGTTCTTCAATTTAAAAAATTTCCCTTGAATCTAATTCAAGATGATTTAAAGATCTTTTTATTTGCAGAGGTCTTCTCTAGGCTATGGCTACTTAACAGAAGAAGAAATCAAAGACCTTTGCACTTCATGTGGTCTTACAAATTACTCATGCAAAATTCAGAAGTCTTTTATTATGTTTACGGCTCAGAAGCCATAA

Protein sequence

>MS.gene67656.t1

MAASATTAASHFFLHPLNNQIQFPKCPHLFTKSHFRPRLLRSQTQRFNIRASSAVVVESPSDLSTKQDKGTQVDLFACPICYEPLIRKGPVGLNLSAIYRSGFKCKRCQKSYTSKDGYLDLTVTSGLRDYVEVQPNRTELFRSPLVSFLYERGWRQNFRQSGFPGPDEEFRMAQEYFEPAKGGLIVDVSCGSGLFSRKFAKSGTYSGVIALDFSENMLRQCYDFIKKDDTLSTTNLALVRADVSRLPFESSSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTSWVARLFRERSSLGYGYLTEEEIKDLCTSCGLTNYSCKIQKSFIMFTAQKP