Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068127.t1 | XP_004509673.1 | 92.1 | 126 | 10 | 0 | 3 | 128 | 143 | 268 | 1.40E-56 | 228.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068127.t1 | A0A1S2YTH9 | 92.1 | 126 | 10 | 0 | 3 | 128 | 143 | 268 | 1.0e-56 | 228.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene068127 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene068127 | 0.813349 | 2.68E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene068127 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene049230 | MS.gene068127 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene068127 | 0.805441 | 1.33E-49 | -1.69E-46 |
| MS.gene049444 | MS.gene068127 | 0.813342 | 2.69E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene068127 | 0.806744 | 7.09E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene068127 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene050168 | MS.gene068127 | 0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene068127 | 0.804739 | 1.87E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene068127 | 0.802454 | 5.57E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene068127 | 0.803103 | 4.09E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene068127 | -0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene068127 | 0.852164 | 5.52E-61 | -1.69E-46 |
| MS.gene050987 | MS.gene068127 | 0.811958 | 5.39E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene068127 | 0.851985 | 6.21E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene068127 | 0.812065 | 5.11E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene068127 | 0.820366 | 7.13E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene068127 | 0.834452 | 2.97E-56 | -1.69E-46 |
| MS.gene052309 | MS.gene068127 | -0.824358 | 8.43E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene068127 | 0.839215 | 1.81E-57 | -1.69E-46 |
| MS.gene053073 | MS.gene068127 | 0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene068127 | 0.801782 | 7.66E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene068127 | 0.800021 | 1.75E-48 | -1.69E-46 |
| MS.gene053557 | MS.gene068127 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene053559 | MS.gene068127 | 0.824581 | 7.47E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene068127 | 0.831948 | 1.25E-55 | -1.69E-46 |
| MS.gene053907 | MS.gene068127 | 0.826061 | 3.33E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene068127 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene068127 | 0.806346 | 8.60E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene068127 | 0.850918 | 1.24E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene068127 | 0.825056 | 5.77E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene068127 | 0.814703 | 1.35E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene068127 | 0.84371 | 1.19E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene068127 | 0.856285 | 3.57E-62 | -1.69E-46 |
| MS.gene057396 | MS.gene068127 | 0.814404 | 1.57E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene068127 | 0.810964 | 8.87E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene068127 | 0.82438 | 8.33E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene068127 | 0.882187 | 1.29E-70 | -1.69E-46 |
| MS.gene058201 | MS.gene068127 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene068127 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene068127 | 0.84941 | 3.29E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene068127 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene059247 | MS.gene068127 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene068127 | 0.844136 | 9.11E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene068127 | 0.811274 | 7.60E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene068127 | 0.851176 | 1.05E-60 | -1.69E-46 |
| MS.gene059899 | MS.gene068127 | 0.862349 | 5.40E-64 | -1.69E-46 |
| MS.gene060083 | MS.gene068127 | 0.821447 | 4.02E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene068127 | 0.835323 | 1.79E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene068127 | 0.834747 | 2.51E-56 | -1.69E-46 |
| MS.gene061159 | MS.gene068127 | 0.812052 | 5.15E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068127.t1 | MTR_8g069450 | 96.875 | 128 | 4 | 0 | 1 | 128 | 128 | 255 | 1.98e-88 | 257 |
| MS.gene068127.t1 | MTR_8g069450 | 96.875 | 128 | 4 | 0 | 1 | 128 | 128 | 255 | 2.43e-88 | 257 |
| MS.gene068127.t1 | MTR_8g069450 | 96.875 | 128 | 4 | 0 | 1 | 128 | 128 | 255 | 4.42e-87 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068127.t1 | AT3G26580 | 81.250 | 128 | 24 | 0 | 1 | 128 | 154 | 281 | 2.00e-75 | 228 |
Find 39 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCAAGATCTACATTATT+TGG | 0.191918 | 8.1:+35791587 | MS.gene068127:CDS |
| GCAATCCTTATGGCGATTAT+TGG | 0.215703 | 8.1:-35791773 | None:intergenic |
| TGCAGAACTTCGTTACATTT+TGG | 0.260230 | 8.1:+35791855 | MS.gene068127:CDS |
| GATTTGGGTAAGAAAGCTTA+TGG | 0.281355 | 8.1:+35791512 | MS.gene068127:CDS |
| GTGAATTTCAGATACAAATA+TGG | 0.289294 | 8.1:+35791731 | MS.gene068127:intron |
| AGCTCAGTTGATGTATGATT+TGG | 0.292561 | 8.1:+35791496 | MS.gene068127:CDS |
| AAGAGAAGAGGATGAGAGTT+AGG | 0.351749 | 8.1:+35790237 | None:intergenic |
| GTATAGTCACCATCTCTTCT+TGG | 0.352541 | 8.1:-35791900 | None:intergenic |
| TCTTGGGTTATCTTGAGCTT+TGG | 0.386466 | 8.1:-35791883 | None:intergenic |
| TATAGTCACCATCTCTTCTT+GGG | 0.408773 | 8.1:-35791899 | None:intergenic |
| TGACGTTTGATGCTAATACT+AGG | 0.431805 | 8.1:-35791829 | None:intergenic |
| GCTCAGTTGATGTATGATTT+GGG | 0.432267 | 8.1:+35791497 | MS.gene068127:CDS |
| AAAGAGCAATGCAATCCTTA+TGG | 0.434951 | 8.1:-35791783 | None:intergenic |
| CCACCAAATAATGTAGATCT+TGG | 0.439479 | 8.1:-35791590 | None:intergenic |
| AGTTAGGAAAGAGCTTGAAA+AGG | 0.442833 | 8.1:+35790253 | MS.gene068127:CDS |
| ATTTGGGTAAGAAAGCTTAT+GGG | 0.445943 | 8.1:+35791513 | MS.gene068127:CDS |
| ATGGCTGGCTATGGCTTATG+AGG | 0.453962 | 8.1:+35791750 | MS.gene068127:CDS |
| GTCATAACTAGAACCAATCA+AGG | 0.468929 | 8.1:-35791923 | None:intergenic |
| ATGGTGACTATACCCTTGAT+TGG | 0.471938 | 8.1:+35791910 | MS.gene068127:CDS |
| CGTGCCGTTGAGTTTCTTGA+AGG | 0.493680 | 8.1:+35791551 | MS.gene068127:CDS |
| GACGTTTGATGCTAATACTA+GGG | 0.495643 | 8.1:-35791828 | None:intergenic |
| ATCTACATTATTTGGTGGTG+AGG | 0.501114 | 8.1:+35791595 | MS.gene068127:CDS |
| TGATTGGTTCTAGTTATGAC+AGG | 0.513314 | 8.1:+35791926 | MS.gene068127:CDS |
| GAATCAGGTGGCTAAGGAGC+AGG | 0.526095 | 8.1:+35791457 | MS.gene068127:intron |
| CCAAGATCTACATTATTTGG+TGG | 0.527272 | 8.1:+35791590 | MS.gene068127:CDS |
| GCTTATGGGAGAGGCACGTA+TGG | 0.534948 | 8.1:+35791527 | MS.gene068127:CDS |
| TAAGGAGCAGGCAGAGAGGA+GGG | 0.539752 | 8.1:+35791469 | MS.gene068127:CDS |
| GGTAAGAAAGCTTATGGGAG+AGG | 0.539832 | 8.1:+35791518 | MS.gene068127:CDS |
| TGAGGCCAATAATCGCCATA+AGG | 0.547038 | 8.1:+35791768 | MS.gene068127:CDS |
| TAATGTAGATCTTGGTATGA+TGG | 0.552370 | 8.1:-35791582 | None:intergenic |
| ATTTCAGATACAAATATGGC+TGG | 0.553752 | 8.1:+35791735 | MS.gene068127:intron |
| GATACAAATATGGCTGGCTA+TGG | 0.569208 | 8.1:+35791741 | MS.gene068127:intron |
| CAAGATAACCCAAGAAGAGA+TGG | 0.579385 | 8.1:+35791891 | MS.gene068127:CDS |
| CTAAGGAGCAGGCAGAGAGG+AGG | 0.584864 | 8.1:+35791468 | MS.gene068127:CDS |
| TTTGACGAATCAGGTGGCTA+AGG | 0.599329 | 8.1:+35791451 | MS.gene068127:intron |
| TGCACCTTCAAGAAACTCAA+CGG | 0.650398 | 8.1:-35791555 | None:intergenic |
| ATCATACATCAACTGAGCTG+TGG | 0.650968 | 8.1:-35791492 | None:intergenic |
| TCATAACTAGAACCAATCAA+GGG | 0.666833 | 8.1:-35791922 | None:intergenic |
| TGGCTAAGGAGCAGGCAGAG+AGG | 0.675876 | 8.1:+35791465 | MS.gene068127:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGCAATTTTTTATTTTTT+AGG | + | chr8.1:35790765-35790784 | MS.gene068127:intron | 10.0% |
| !!! | AATTTTGTAGTTTTTGTTTT+TGG | + | chr8.1:35790403-35790422 | MS.gene068127:intron | 15.0% |
| !! | CATATACATCATTTATTCAA+CGG | + | chr8.1:35790827-35790846 | MS.gene068127:intron | 20.0% |
| !! | GATGTATATGATCTATATTA+TGG | - | chr8.1:35790817-35790836 | None:intergenic | 20.0% |
| !! | TAAACAGTAGTTTAGTATTT+AGG | - | chr8.1:35790434-35790453 | None:intergenic | 20.0% |
| !! | TAACAAGGATAATTTCTTAA+AGG | + | chr8.1:35790452-35790471 | MS.gene068127:intron | 20.0% |
| !! | TTGCTTACAAATATTTGTTT+AGG | - | chr8.1:35791343-35791362 | None:intergenic | 20.0% |
| !!! | AATAACTATTCTTGGTTTTT+TGG | + | chr8.1:35791164-35791183 | MS.gene068127:intron | 20.0% |
| !!! | AGATGGATTGTAATATTATA+TGG | + | chr8.1:35791136-35791155 | MS.gene068127:intron | 20.0% |
| !!! | GATTCTTATTTAGTTAAGAA+TGG | - | chr8.1:35791626-35791645 | None:intergenic | 20.0% |
| !!! | TTTTTGACTAATTTGTTGAT+TGG | + | chr8.1:35790924-35790943 | MS.gene068127:intron | 20.0% |
| ! | ACAGTTATGAGAAAATCATT+TGG | - | chr8.1:35790512-35790531 | None:intergenic | 25.0% |
| ! | ATACCAAGATCTACATTATT+TGG | + | chr8.1:35791587-35791606 | MS.gene068127:CDS | 25.0% |
| ! | CAGTTATGAGAAAATCATTT+GGG | - | chr8.1:35790511-35790530 | None:intergenic | 25.0% |
| ! | CATTGAATAAATGATGTATG+TGG | + | chr8.1:35790790-35790809 | MS.gene068127:intron | 25.0% |
| ! | GTGAATTTCAGATACAAATA+TGG | + | chr8.1:35791731-35791750 | MS.gene068127:intron | 25.0% |
| ! | GTGTATGTAAAGAAAACAAA+AGG | - | chr8.1:35791025-35791044 | None:intergenic | 25.0% |
| ! | TACTAAACTACTGTTTAACA+AGG | + | chr8.1:35790437-35790456 | MS.gene068127:intron | 25.0% |
| !!! | GTTTTCATACTTTTTGTTTG+AGG | + | chr8.1:35791219-35791238 | MS.gene068127:intron | 25.0% |
| !!! | TGTAGTTTTTGTTTTTGGAA+AGG | + | chr8.1:35790408-35790427 | MS.gene068127:intron | 25.0% |
| AACTATTACATATGAGACAG+AGG | - | chr8.1:35790358-35790377 | None:intergenic | 30.0% | |
| ATTTCAGATACAAATATGGC+TGG | + | chr8.1:35791735-35791754 | MS.gene068127:intron | 30.0% | |
| ATTTGGGTAAGAAAGCTTAT+GGG | + | chr8.1:35791513-35791532 | MS.gene068127:CDS | 30.0% | |
| CTAGAAGTGAAACATTAAGA+TGG | + | chr8.1:35791119-35791138 | MS.gene068127:intron | 30.0% | |
| TAATGTAGATCTTGGTATGA+TGG | - | chr8.1:35791585-35791604 | None:intergenic | 30.0% | |
| TCATAACTAGAACCAATCAA+GGG | - | chr8.1:35791925-35791944 | None:intergenic | 30.0% | |
| TGCTTATAATTGAGACTAGA+GGG | - | chr8.1:35790751-35790770 | None:intergenic | 30.0% | |
| TGGTGCATAATAACTATTCT+TGG | + | chr8.1:35791156-35791175 | MS.gene068127:intron | 30.0% | |
| TGTCAGTTGTCTAATGATAA+AGG | - | chr8.1:35791080-35791099 | None:intergenic | 30.0% | |
| TTGCTTATAATTGAGACTAG+AGG | - | chr8.1:35790752-35790771 | None:intergenic | 30.0% | |
| ! | ATCTTTTTGTTGGGACTTAT+GGG | - | chr8.1:35790706-35790725 | None:intergenic | 30.0% |
| AAAACCCGAAAGCAGTTATA+TGG | - | chr8.1:35790602-35790621 | None:intergenic | 35.0% | |
| AAAGAGCAATGCAATCCTTA+TGG | - | chr8.1:35791786-35791805 | None:intergenic | 35.0% | |
| ACAAAGTTTCACGATAACAG+TGG | - | chr8.1:35790994-35791013 | None:intergenic | 35.0% | |
| ACTCGTTGACATATTGTTTG+TGG | + | chr8.1:35791428-35791447 | MS.gene068127:intron | 35.0% | |
| ACTGTTATCGTGAAACTTTG+TGG | + | chr8.1:35790993-35791012 | MS.gene068127:intron | 35.0% | |
| AGTTAGGAAAGAGCTTGAAA+AGG | + | chr8.1:35790253-35790272 | MS.gene068127:CDS | 35.0% | |
| CAAAGTTTCACGATAACAGT+GGG | - | chr8.1:35790993-35791012 | None:intergenic | 35.0% | |
| CACAAGTATGTCTAGATACT+AGG | - | chr8.1:35790634-35790653 | None:intergenic | 35.0% | |
| CCAAGATCTACATTATTTGG+TGG | + | chr8.1:35791590-35791609 | MS.gene068127:CDS | 35.0% | |
| CCACCAAATAATGTAGATCT+TGG | - | chr8.1:35791593-35791612 | None:intergenic | 35.0% | |
| GACGTTTGATGCTAATACTA+GGG | - | chr8.1:35791831-35791850 | None:intergenic | 35.0% | |
| GATTTGGGTAAGAAAGCTTA+TGG | + | chr8.1:35791512-35791531 | MS.gene068127:CDS | 35.0% | |
| GTCATAACTAGAACCAATCA+AGG | - | chr8.1:35791926-35791945 | None:intergenic | 35.0% | |
| TATAGTCACCATCTCTTCTT+GGG | - | chr8.1:35791902-35791921 | None:intergenic | 35.0% | |
| TGACGTTTGATGCTAATACT+AGG | - | chr8.1:35791832-35791851 | None:intergenic | 35.0% | |
| ! | ACTCTCTCGATCTTTTTGTT+GGG | - | chr8.1:35790715-35790734 | None:intergenic | 35.0% |
| ! | AGCTCAGTTGATGTATGATT+TGG | + | chr8.1:35791496-35791515 | MS.gene068127:CDS | 35.0% |
| ! | GATCTTTTTGTTGGGACTTA+TGG | - | chr8.1:35790707-35790726 | None:intergenic | 35.0% |
| ! | GCTCAGTTGATGTATGATTT+GGG | + | chr8.1:35791497-35791516 | MS.gene068127:CDS | 35.0% |
| ! | TGATCCTCTCTAGTGTTTTA+AGG | + | chr8.1:35790677-35790696 | MS.gene068127:intron | 35.0% |
| ! | TGCAGAACTTCGTTACATTT+TGG | + | chr8.1:35791855-35791874 | MS.gene068127:CDS | 35.0% |
| !! | ACCATTATTTTTCTCCTCTC+GGG | + | chr8.1:35791382-35791401 | MS.gene068127:intron | 35.0% |
| !! | AGACAGAGGAGTACTAATTA+AGG | - | chr8.1:35790344-35790363 | None:intergenic | 35.0% |
| !! | ATCTACATTATTTGGTGGTG+AGG | + | chr8.1:35791595-35791614 | MS.gene068127:CDS | 35.0% |
| !! | GACCATTATTTTTCTCCTCT+CGG | + | chr8.1:35791381-35791400 | MS.gene068127:intron | 35.0% |
| !! | TTCACTTCTAGTGACTTGTT+AGG | - | chr8.1:35791110-35791129 | None:intergenic | 35.0% |
| !!! | ATATAACTGCTTTCGGGTTT+TGG | + | chr8.1:35790601-35790620 | MS.gene068127:intron | 35.0% |
| !!! | TATAACTGCTTTCGGGTTTT+GGG | + | chr8.1:35790602-35790621 | MS.gene068127:intron | 35.0% |
| ACCCGAGAGGAGAAAAATAA+TGG | - | chr8.1:35791386-35791405 | None:intergenic | 40.0% | |
| ATCATACATCAACTGAGCTG+TGG | - | chr8.1:35791495-35791514 | None:intergenic | 40.0% | |
| ATGGTGACTATACCCTTGAT+TGG | + | chr8.1:35791910-35791929 | MS.gene068127:CDS | 40.0% | |
| CAAGATAACCCAAGAAGAGA+TGG | + | chr8.1:35791891-35791910 | MS.gene068127:CDS | 40.0% | |
| GAAGCCTTAAAACACTAGAG+AGG | - | chr8.1:35790684-35790703 | None:intergenic | 40.0% | |
| GCAATCCTTATGGCGATTAT+TGG | - | chr8.1:35791776-35791795 | None:intergenic | 40.0% | |
| GTATAGTCACCATCTCTTCT+TGG | - | chr8.1:35791903-35791922 | None:intergenic | 40.0% | |
| GTGGAGGGTGATGATTAAAT+TGG | + | chr8.1:35791404-35791423 | MS.gene068127:intron | 40.0% | |
| TCTTGGGTTATCTTGAGCTT+TGG | - | chr8.1:35791886-35791905 | None:intergenic | 40.0% | |
| TGCACCTTCAAGAAACTCAA+CGG | - | chr8.1:35791558-35791577 | None:intergenic | 40.0% | |
| TGTTTGTGGTTTGACGAATC+AGG | + | chr8.1:35791442-35791461 | MS.gene068127:intron | 40.0% | |
| ! | CACTCTCTCGATCTTTTTGT+TGG | - | chr8.1:35790716-35790735 | None:intergenic | 40.0% |
| ! | GATACAAATATGGCTGGCTA+TGG | + | chr8.1:35791741-35791760 | MS.gene068127:intron | 40.0% |
| !! | ATTATTTTTCTCCTCTCGGG+TGG | + | chr8.1:35791385-35791404 | MS.gene068127:intron | 40.0% |
| CCAACGAGACATCGCTTAAT+TGG | - | chr8.1:35791047-35791066 | None:intergenic | 45.0% | |
| CCAATTAAGCGATGTCTCGT+TGG | + | chr8.1:35791044-35791063 | MS.gene068127:intron | 45.0% | |
| CCCTGCCATATAACTGCTTT+CGG | + | chr8.1:35790594-35790613 | MS.gene068127:intron | 45.0% | |
| CCGAAAGCAGTTATATGGCA+GGG | - | chr8.1:35790597-35790616 | None:intergenic | 45.0% | |
| CCTGCCATATAACTGCTTTC+GGG | + | chr8.1:35790595-35790614 | MS.gene068127:intron | 45.0% | |
| GGTAAGAAAGCTTATGGGAG+AGG | + | chr8.1:35791518-35791537 | MS.gene068127:CDS | 45.0% | |
| TGAGGCCAATAATCGCCATA+AGG | + | chr8.1:35791768-35791787 | MS.gene068127:CDS | 45.0% | |
| TTGTGGTTTGACGAATCAGG+TGG | + | chr8.1:35791445-35791464 | MS.gene068127:intron | 45.0% | |
| TTTGACGAATCAGGTGGCTA+AGG | + | chr8.1:35791451-35791470 | MS.gene068127:intron | 45.0% | |
| CCCGAAAGCAGTTATATGGC+AGG | - | chr8.1:35790598-35790617 | None:intergenic | 50.0% | |
| ! | ATGGCTGGCTATGGCTTATG+AGG | + | chr8.1:35791750-35791769 | MS.gene068127:CDS | 50.0% |
| ! | ATTTTTCTCCTCTCGGGTGG+AGG | + | chr8.1:35791388-35791407 | MS.gene068127:intron | 50.0% |
| ! | CGTGCCGTTGAGTTTCTTGA+AGG | + | chr8.1:35791551-35791570 | MS.gene068127:CDS | 50.0% |
| ! | TTTTTCTCCTCTCGGGTGGA+GGG | + | chr8.1:35791389-35791408 | MS.gene068127:intron | 50.0% |
| GAATCAGGTGGCTAAGGAGC+AGG | + | chr8.1:35791457-35791476 | MS.gene068127:intron | 55.0% | |
| TAAGGAGCAGGCAGAGAGGA+GGG | + | chr8.1:35791469-35791488 | MS.gene068127:CDS | 55.0% | |
| ! | GCTTATGGGAGAGGCACGTA+TGG | + | chr8.1:35791527-35791546 | MS.gene068127:CDS | 55.0% |
| ATCATCACCCTCCACCCGAG+AGG | - | chr8.1:35791399-35791418 | None:intergenic | 60.0% | |
| CTAAGGAGCAGGCAGAGAGG+AGG | + | chr8.1:35791468-35791487 | MS.gene068127:CDS | 60.0% | |
| TGGCTAAGGAGCAGGCAGAG+AGG | + | chr8.1:35791465-35791484 | MS.gene068127:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 35790248 | 35791947 | 35790248 | ID=MS.gene068127 |
| chr8.1 | mRNA | 35790248 | 35791947 | 35790248 | ID=MS.gene068127.t1;Parent=MS.gene068127 |
| chr8.1 | exon | 35790248 | 35790274 | 35790248 | ID=MS.gene068127.t1.exon1;Parent=MS.gene068127.t1 |
| chr8.1 | CDS | 35790248 | 35790274 | 35790248 | ID=cds.MS.gene068127.t1;Parent=MS.gene068127.t1 |
| chr8.1 | exon | 35791464 | 35791616 | 35791464 | ID=MS.gene068127.t1.exon2;Parent=MS.gene068127.t1 |
| chr8.1 | CDS | 35791464 | 35791616 | 35791464 | ID=cds.MS.gene068127.t1;Parent=MS.gene068127.t1 |
| chr8.1 | exon | 35791742 | 35791947 | 35791742 | ID=MS.gene068127.t1.exon3;Parent=MS.gene068127.t1 |
| chr8.1 | CDS | 35791742 | 35791947 | 35791742 | ID=cds.MS.gene068127.t1;Parent=MS.gene068127.t1 |
| Gene Sequence |
| Protein sequence |
