Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071693.t1 | XP_013466683.1 | 98.6 | 208 | 3 | 0 | 1 | 208 | 60 | 267 | 2.60E-108 | 401.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071693.t1 | Q9ZUM2 | 87.0 | 208 | 27 | 0 | 1 | 208 | 66 | 273 | 1.5e-99 | 363.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071693.t1 | A0A072VRG4 | 98.6 | 208 | 3 | 0 | 1 | 208 | 60 | 267 | 1.9e-108 | 401.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene071693 | -0.830252 | 3.26E-55 | -1.69E-46 |
| MS.gene049297 | MS.gene071693 | -0.801564 | 8.49E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene071693 | -0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene071693 | -0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene071693 | -0.831384 | 1.72E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene071693 | -0.824742 | 6.85E-54 | -1.69E-46 |
| MS.gene050330 | MS.gene071693 | 0.837056 | 6.51E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene071693 | -0.831315 | 1.79E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene071693 | -0.848751 | 5.02E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene071693 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene071693 | -0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene071693 | -0.818964 | 1.49E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene071693 | -0.850421 | 1.72E-60 | -1.69E-46 |
| MS.gene050820 | MS.gene071693 | -0.812337 | 4.46E-51 | -1.69E-46 |
| MS.gene051207 | MS.gene071693 | -0.812766 | 3.59E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene071693 | -0.832991 | 6.89E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene071693 | -0.828576 | 8.32E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene071693 | -0.804085 | 2.56E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene071693 | 0.809003 | 2.34E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene071693 | -0.830064 | 3.62E-55 | -1.69E-46 |
| MS.gene052190 | MS.gene071693 | -0.829972 | 3.82E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene071693 | -0.817355 | 3.44E-52 | -1.69E-46 |
| MS.gene052358 | MS.gene071693 | 0.828342 | 9.48E-55 | -1.69E-46 |
| MS.gene052361 | MS.gene071693 | 0.845971 | 2.91E-59 | -1.69E-46 |
| MS.gene053054 | MS.gene071693 | 0.824235 | 9.01E-54 | -1.69E-46 |
| MS.gene053641 | MS.gene071693 | -0.816359 | 5.76E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene071693 | -0.824036 | 1.00E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene071693 | -0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene071693 | -0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene071693 | 0.853372 | 2.50E-61 | -1.69E-46 |
| MS.gene054433 | MS.gene071693 | -0.838053 | 3.61E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene071693 | -0.823785 | 1.15E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene071693 | -0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene054983 | MS.gene071693 | -0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene071693 | -0.863822 | 1.89E-64 | -1.69E-46 |
| MS.gene055357 | MS.gene071693 | -0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene071693 | -0.856347 | 3.42E-62 | -1.69E-46 |
| MS.gene055818 | MS.gene071693 | -0.811273 | 7.60E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene071693 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene071693 | -0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene071693 | -0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene071693 | -0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene057639 | MS.gene071693 | -0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene058426 | MS.gene071693 | -0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene071693 | -0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene071693 | 0.854985 | 8.55E-62 | -1.69E-46 |
| MS.gene060322 | MS.gene071693 | -0.830993 | 2.15E-55 | -1.69E-46 |
| MS.gene060683 | MS.gene071693 | -0.811565 | 6.57E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene071693 | -0.819304 | 1.25E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene071693 | -0.812479 | 4.15E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene071693 | 0.905949 | 2.50E-80 | -1.69E-46 |
| MS.gene061114 | MS.gene071693 | 0.878411 | 2.87E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071693.t1 | MTR_1g033830 | 98.558 | 208 | 3 | 0 | 1 | 208 | 60 | 267 | 2.98e-149 | 416 |
| MS.gene071693.t1 | MTR_1g033830 | 98.171 | 164 | 3 | 0 | 1 | 164 | 60 | 223 | 9.91e-114 | 323 |
| MS.gene071693.t1 | MTR_2g022880 | 59.615 | 208 | 84 | 0 | 1 | 208 | 47 | 254 | 6.23e-90 | 266 |
| MS.gene071693.t1 | MTR_4g094212 | 55.288 | 208 | 93 | 0 | 1 | 208 | 52 | 259 | 4.29e-85 | 253 |
| MS.gene071693.t1 | MTR_4g131930 | 58.454 | 207 | 86 | 0 | 2 | 208 | 42 | 248 | 7.27e-81 | 242 |
| MS.gene071693.t1 | MTR_2g022880 | 59.677 | 186 | 75 | 0 | 1 | 186 | 47 | 232 | 1.16e-77 | 233 |
| MS.gene071693.t1 | MTR_4g131930 | 54.595 | 185 | 84 | 0 | 24 | 208 | 1 | 185 | 6.18e-64 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071693.t1 | AT2G02180 | 87.019 | 208 | 27 | 0 | 1 | 208 | 66 | 273 | 1.07e-133 | 377 |
| MS.gene071693.t1 | AT1G14530 | 84.135 | 208 | 33 | 0 | 1 | 208 | 56 | 263 | 1.62e-121 | 346 |
| MS.gene071693.t1 | AT1G14530 | 84.699 | 183 | 28 | 0 | 1 | 183 | 56 | 238 | 4.30e-114 | 325 |
| MS.gene071693.t1 | AT4G21790 | 59.135 | 208 | 85 | 0 | 1 | 208 | 54 | 261 | 3.24e-88 | 261 |
Find 40 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCACTTCTGGTCTTGTTC+TGG | 0.161658 | 1.1:-44573683 | MS.gene071693:CDS |
| CTGTCTAAGGTGTTCTTTGC+AGG | 0.219822 | 1.1:-44570792 | MS.gene071693:intron |
| CTTTACAACATATGCACTTC+TGG | 0.271976 | 1.1:-44573694 | MS.gene071693:CDS |
| TGGGTAGTCCAACCATATTC+TGG | 0.305600 | 1.1:+44574994 | None:intergenic |
| TGAGAAAATGAAACACCTTC+TGG | 0.307420 | 1.1:+44574974 | None:intergenic |
| CAATTGAGAGTTCCAGAATA+TGG | 0.308572 | 1.1:-44575006 | MS.gene071693:CDS |
| TGTTGTGGTTTATGCTGTTC+AGG | 0.311273 | 1.1:-44573476 | MS.gene071693:intron |
| TGCACTTCTGGTCTTGTTCT+GGG | 0.328875 | 1.1:-44573682 | MS.gene071693:CDS |
| TTTCCTTATCAGAAGTGTTA+TGG | 0.345609 | 1.1:-44568632 | MS.gene071693:intron |
| CGTACTAGTCATTCTGTCTA+AGG | 0.350388 | 1.1:-44570805 | MS.gene071693:CDS |
| CAGCTTCTTACGACGCCCTT+TGG | 0.359651 | 1.1:+44570078 | None:intergenic |
| GTTTCTTTGTTTGCTGCCCT+TGG | 0.365159 | 1.1:-44570670 | MS.gene071693:CDS |
| CGACGCCCTTTGGATTCAAC+AGG | 0.380572 | 1.1:+44570088 | None:intergenic |
| TAGGATGGTCCATCACATTA+AGG | 0.382104 | 1.1:+44568495 | None:intergenic |
| CTGGGCTGAGATTTATTACC+AGG | 0.402191 | 1.1:-44573664 | MS.gene071693:intron |
| GCCCTTGGCTTTCTTCTCTA+CGG | 0.437396 | 1.1:-44570655 | MS.gene071693:CDS |
| GAGAAAATGAAACACCTTCT+GGG | 0.439545 | 1.1:+44574975 | None:intergenic |
| CGCTTTCCTGTTGAATCCAA+AGG | 0.469858 | 1.1:-44570094 | MS.gene071693:CDS |
| ACATTAATTGTATAGAAACT+TGG | 0.472412 | 1.1:+44573496 | None:intergenic |
| TCACCATAACACTTCTGATA+AGG | 0.473201 | 1.1:+44568629 | None:intergenic |
| GCACATCAAGTAAGATATGT+TGG | 0.497834 | 1.1:+44573730 | None:intergenic |
| GCTTTCTTCTCTACGGTGGA+AGG | 0.504569 | 1.1:-44570648 | MS.gene071693:intron |
| TAATATATGAAGTTTAGAAT+AGG | 0.508408 | 1.1:+44568476 | None:intergenic |
| TTTCTATACAATTAATGTTG+TGG | 0.510519 | 1.1:-44573491 | MS.gene071693:CDS |
| TGAGAGTTCCAGAATATGGT+TGG | 0.518623 | 1.1:-44575002 | MS.gene071693:CDS |
| GCTTTCCTGTTGAATCCAAA+GGG | 0.544156 | 1.1:-44570093 | MS.gene071693:CDS |
| GCACGTGCTGTATCCACTGA+TGG | 0.558795 | 1.1:-44573526 | MS.gene071693:CDS |
| AAACGCGAACCTTAATGTGA+TGG | 0.562294 | 1.1:-44568504 | MS.gene071693:CDS |
| TCTAAACTTCATATATTACC+TGG | 0.590927 | 1.1:-44568471 | None:intergenic |
| CTTGGCTTTCTTCTCTACGG+TGG | 0.595848 | 1.1:-44570652 | MS.gene071693:CDS |
| ACCGTAGAGAAGAAAGCCAA+GGG | 0.603119 | 1.1:+44570654 | None:intergenic |
| CACCGTAGAGAAGAAAGCCA+AGG | 0.609487 | 1.1:+44570653 | None:intergenic |
| ACTTGGCTTCAGTCCATCAG+TGG | 0.611275 | 1.1:+44573513 | None:intergenic |
| GTTGTAAAGAAAGCAAGACT+TGG | 0.617097 | 1.1:+44573708 | None:intergenic |
| AGAATGACTAGTACGCTGAC+TGG | 0.622590 | 1.1:+44570813 | None:intergenic |
| ATATGAAGTTTAGAATAGGA+TGG | 0.649295 | 1.1:+44568480 | None:intergenic |
| ATATGGTTGGACTACCCAGA+AGG | 0.660843 | 1.1:-44574989 | MS.gene071693:CDS |
| TCTTCTTTCGGAATGTACAG+AGG | 0.665668 | 1.1:-44574794 | MS.gene071693:CDS |
| GCGTCGTAAGAAGCTGCAAG+AGG | 0.671751 | 1.1:-44570071 | MS.gene071693:intron |
| TGTACAGAGGTTACAGCCAG+AGG | 0.691850 | 1.1:-44574781 | MS.gene071693:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAACAAAAAAAAGAT+TGG | + | chr1.1:44572617-44572636 | None:intergenic | 10.0% |
| !! | ATCAAAAATTGAAAAATTTA+AGG | - | chr1.1:44573238-44573257 | MS.gene071693:intron | 10.0% |
| !! | ATTAGAGATATATTAATATT+TGG | + | chr1.1:44574186-44574205 | None:intergenic | 10.0% |
| !! | TAATGATGTTAATATATATT+GGG | + | chr1.1:44573809-44573828 | None:intergenic | 10.0% |
| !! | TTAATGATGTTAATATATAT+TGG | + | chr1.1:44573810-44573829 | None:intergenic | 10.0% |
| !!! | AATTTTGATTTAAAAATAGA+AGG | + | chr1.1:44574896-44574915 | None:intergenic | 10.0% |
| !!! | ATTTTGATTTAAAAATAGAA+GGG | + | chr1.1:44574895-44574914 | None:intergenic | 10.0% |
| !!! | ATTTTGTTTTTATAAAAAAG+GGG | + | chr1.1:44571004-44571023 | None:intergenic | 10.0% |
| !!! | GATTTTGTTTTTATAAAAAA+GGG | + | chr1.1:44571005-44571024 | None:intergenic | 10.0% |
| !!! | TGATTTTGTTTTTATAAAAA+AGG | + | chr1.1:44571006-44571025 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTTTTTTTTTTGT+TGG | - | chr1.1:44572880-44572899 | MS.gene071693:intron | 10.0% |
| !! | AAAAAATAATGACTGTAATA+TGG | + | chr1.1:44570619-44570638 | None:intergenic | 15.0% |
| !! | AATTAAAATTATGAGTTGTT+AGG | + | chr1.1:44573564-44573583 | None:intergenic | 15.0% |
| !! | CTCTAATAAAGTAATTATTT+GGG | - | chr1.1:44574199-44574218 | MS.gene071693:intron | 15.0% |
| !! | TAACTTAAGAATTCAAAAAA+AGG | + | chr1.1:44573780-44573799 | None:intergenic | 15.0% |
| !! | TAAGAGTAATTAAGATTAAT+AGG | + | chr1.1:44573661-44573680 | None:intergenic | 15.0% |
| !! | TCTCTAATAAAGTAATTATT+TGG | - | chr1.1:44574198-44574217 | MS.gene071693:intron | 15.0% |
| !! | TGATATATGATGAAATATTA+TGG | - | chr1.1:44569435-44569454 | MS.gene071693:intron | 15.0% |
| !!! | TAATATATGAAGTTTAGAAT+AGG | + | chr1.1:44575023-44575042 | None:intergenic | 15.0% |
| !!! | TTTTGATTTAAAAATAGAAG+GGG | + | chr1.1:44574894-44574913 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTATAAAAAAGG+GGG | + | chr1.1:44571003-44571022 | None:intergenic | 15.0% |
| !! | AATGTAACTAGAAAAAAAAG+AGG | - | chr1.1:44573899-44573918 | MS.gene071693:intron | 20.0% |
| !! | ACATTAATTGTATAGAAACT+TGG | + | chr1.1:44570003-44570022 | None:intergenic | 20.0% |
| !! | GATTATATTACAATAGCTTA+AGG | + | chr1.1:44570245-44570264 | None:intergenic | 20.0% |
| !! | TATTTCAACATAGTAATGAT+CGG | - | chr1.1:44570910-44570929 | MS.gene071693:intron | 20.0% |
| !! | TGATGATTACAATTGATTAA+CGG | + | chr1.1:44569573-44569592 | None:intergenic | 20.0% |
| !! | TTTCTATACAATTAATGTTG+TGG | - | chr1.1:44570005-44570024 | MS.gene071693:intron | 20.0% |
| !!! | AAATCAAAATTGATTCCTAT+TGG | - | chr1.1:44574905-44574924 | MS.gene071693:intron | 20.0% |
| !!! | AATATACTGTTTTCAAACTA+TGG | - | chr1.1:44571657-44571676 | MS.gene071693:intron | 20.0% |
| !!! | ACTTAGATAAAAGTTCTAAA+CGG | - | chr1.1:44571599-44571618 | MS.gene071693:intron | 20.0% |
| !!! | AGTAGTTCTATTATATTAGT+GGG | + | chr1.1:44573498-44573517 | None:intergenic | 20.0% |
| !!! | ATTCTTATTTGTAAAGAACA+GGG | - | chr1.1:44569682-44569701 | MS.gene071693:intron | 20.0% |
| !!! | GAACATTTAACTTTTATGTA+GGG | + | chr1.1:44571477-44571496 | None:intergenic | 20.0% |
| !!! | GTTGCTATATGATTTTTATT+AGG | - | chr1.1:44569511-44569530 | MS.gene071693:intron | 20.0% |
| !!! | TAGTAGTTCTATTATATTAG+TGG | + | chr1.1:44573499-44573518 | None:intergenic | 20.0% |
| !!! | TATTCTTATTTGTAAAGAAC+AGG | - | chr1.1:44569681-44569700 | MS.gene071693:intron | 20.0% |
| !!! | TTAGTGATATGTAAACTTTT+TGG | - | chr1.1:44568653-44568672 | MS.gene071693:CDS | 20.0% |
| !!! | TTTGTTTTTATAAAAAAGGG+GGG | + | chr1.1:44571002-44571021 | None:intergenic | 20.0% |
| ! | AAAATTTCCTTAAGCTTATG+CGG | + | chr1.1:44568872-44568891 | None:intergenic | 25.0% |
| ! | AAAGTTACTTAGAAACATCT+GGG | - | chr1.1:44571828-44571847 | MS.gene071693:intron | 25.0% |
| ! | AATATAAACATGTCAGATGA+GGG | + | chr1.1:44573597-44573616 | None:intergenic | 25.0% |
| ! | AATATTGAAATCAGAACCAA+TGG | + | chr1.1:44572534-44572553 | None:intergenic | 25.0% |
| ! | AATTCCTATAACCTAAACAT+GGG | + | chr1.1:44574669-44574688 | None:intergenic | 25.0% |
| ! | ACAATTCAGTAAAATGAGAA+TGG | + | chr1.1:44570422-44570441 | None:intergenic | 25.0% |
| ! | ACATGATATAATTAGACATG+GGG | - | chr1.1:44569202-44569221 | MS.gene071693:intron | 25.0% |
| ! | ACGGATAATATTATTTCACA+TGG | - | chr1.1:44570394-44570413 | MS.gene071693:intron | 25.0% |
| ! | AGACATGATATAATTAGACA+TGG | - | chr1.1:44569200-44569219 | MS.gene071693:intron | 25.0% |
| ! | AGTGCTAGAATTTAATCAAA+AGG | + | chr1.1:44571061-44571080 | None:intergenic | 25.0% |
| ! | ATAATTAAGAGCTATTAGTG+GGG | - | chr1.1:44574242-44574261 | MS.gene071693:intron | 25.0% |
| ! | ATATTGCCACTAGTTAAATT+TGG | - | chr1.1:44571101-44571120 | MS.gene071693:intron | 25.0% |
| ! | CAATTTAAAAACCAACCAAT+AGG | + | chr1.1:44574923-44574942 | None:intergenic | 25.0% |
| ! | CCTTAATTTCAAAACGAAAT+AGG | - | chr1.1:44573834-44573853 | MS.gene071693:intron | 25.0% |
| ! | GACATGATATAATTAGACAT+GGG | - | chr1.1:44569201-44569220 | MS.gene071693:intron | 25.0% |
| ! | GAGAAGATAATAGAAAAAGA+AGG | + | chr1.1:44573203-44573222 | None:intergenic | 25.0% |
| ! | GATAATTAAGAGCTATTAGT+GGG | - | chr1.1:44574241-44574260 | MS.gene071693:intron | 25.0% |
| ! | TAATTCCTATAACCTAAACA+TGG | + | chr1.1:44574670-44574689 | None:intergenic | 25.0% |
| ! | TAGGAATTATCTAGAGATAA+AGG | - | chr1.1:44574681-44574700 | MS.gene071693:intron | 25.0% |
| ! | TAGTTATGATAGACAAAAGA+TGG | + | chr1.1:44572468-44572487 | None:intergenic | 25.0% |
| ! | TATTACTACAATCAAACTTC+TGG | - | chr1.1:44570154-44570173 | MS.gene071693:intron | 25.0% |
| ! | TCTATTATATTAGTGGGATT+GGG | + | chr1.1:44573492-44573511 | None:intergenic | 25.0% |
| ! | TGATAATTAAGAGCTATTAG+TGG | - | chr1.1:44574240-44574259 | MS.gene071693:intron | 25.0% |
| ! | TTCATTCCAAATTACATCAA+GGG | + | chr1.1:44572917-44572936 | None:intergenic | 25.0% |
| ! | TTCTATTATATTAGTGGGAT+TGG | + | chr1.1:44573493-44573512 | None:intergenic | 25.0% |
| ! | TTCTGGACAATATAATTTGA+TGG | - | chr1.1:44570171-44570190 | MS.gene071693:intron | 25.0% |
| ! | TTTCATTCCAAATTACATCA+AGG | + | chr1.1:44572918-44572937 | None:intergenic | 25.0% |
| ! | TTTCCATGAATCAATGATTA+CGG | - | chr1.1:44570375-44570394 | MS.gene071693:intron | 25.0% |
| !! | AAGGAGAGTATATCAAATTA+AGG | - | chr1.1:44569319-44569338 | MS.gene071693:intron | 25.0% |
| !! | AATAAGTGATGTTTCTTTTC+AGG | - | chr1.1:44574810-44574829 | MS.gene071693:CDS | 25.0% |
| !! | AGGAGAGTATATCAAATTAA+GGG | - | chr1.1:44569320-44569339 | MS.gene071693:intron | 25.0% |
| !! | ATATGAAGTTTAGAATAGGA+TGG | + | chr1.1:44575019-44575038 | None:intergenic | 25.0% |
| !! | ATCCTGATTTTCTAATTAAC+TGG | + | chr1.1:44572306-44572325 | None:intergenic | 25.0% |
| !! | ATTCTCATTTTACTGAATTG+TGG | - | chr1.1:44570421-44570440 | MS.gene071693:intron | 25.0% |
| !! | CAAATGTCAAGTGAAAATTT+TGG | - | chr1.1:44570264-44570283 | MS.gene071693:intron | 25.0% |
| !! | GATGGACTTATTGAATATTA+CGG | + | chr1.1:44572450-44572469 | None:intergenic | 25.0% |
| !! | GTTTCATTTTCTCAATTTTG+TGG | - | chr1.1:44568531-44568550 | MS.gene071693:intron | 25.0% |
| !! | TCTACCATATTTTCTACAAA+AGG | + | chr1.1:44569254-44569273 | None:intergenic | 25.0% |
| !! | TTCTCATTTTACTGAATTGT+GGG | - | chr1.1:44570422-44570441 | MS.gene071693:intron | 25.0% |
| !! | TTTGGAGCGTTTATAAAATT+TGG | - | chr1.1:44570282-44570301 | MS.gene071693:intron | 25.0% |
| !! | TTTTCTCATGGTTTCTTAAA+GGG | - | chr1.1:44573084-44573103 | MS.gene071693:intron | 25.0% |
| !! | TTTTTCTCATGGTTTCTTAA+AGG | - | chr1.1:44573083-44573102 | MS.gene071693:intron | 25.0% |
| !!! | AATATTTGTTTTCAAGAACC+AGG | - | chr1.1:44572034-44572053 | MS.gene071693:intron | 25.0% |
| !!! | ATTTTTTTTGACAACTGCTA+TGG | - | chr1.1:44570721-44570740 | MS.gene071693:intron | 25.0% |
| !!! | CCTATTTCGTTTTGAAATTA+AGG | + | chr1.1:44573837-44573856 | None:intergenic | 25.0% |
| !!! | CTTAGATAAAAGTTCTAAAC+GGG | - | chr1.1:44571600-44571619 | MS.gene071693:intron | 25.0% |
| !!! | GGAACATTTAACTTTTATGT+AGG | + | chr1.1:44571478-44571497 | None:intergenic | 25.0% |
| !!! | GTTTAGTTTTCATCTTCTTT+CGG | - | chr1.1:44568690-44568709 | MS.gene071693:intron | 25.0% |
| !!! | GTTTTACCTTTTTAAGATCA+TGG | - | chr1.1:44570071-44570090 | MS.gene071693:intron | 25.0% |
| !!! | TAGAAAATCACTTTTTCCTT+GGG | + | chr1.1:44570644-44570663 | None:intergenic | 25.0% |
| !!! | TCATTTTGTGGTTGATATTA+TGG | - | chr1.1:44572654-44572673 | MS.gene071693:intron | 25.0% |
| !!! | TTAGAAAATCACTTTTTCCT+TGG | + | chr1.1:44570645-44570664 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATAAAAAAGGGG+GGG | + | chr1.1:44571001-44571020 | None:intergenic | 25.0% |
| !!! | TTTTGTAGTTTGGTTTTGAT+GGG | - | chr1.1:44569913-44569932 | MS.gene071693:intron | 25.0% |
| !!! | TTTTTTGTAATAGATGCTAG+AGG | + | chr1.1:44571506-44571525 | None:intergenic | 25.0% |
| AAGATAAAGTGACAACATAC+AGG | + | chr1.1:44571273-44571292 | None:intergenic | 30.0% | |
| AATATGGTAGAAACATAGCT+TGG | - | chr1.1:44569263-44569282 | MS.gene071693:intron | 30.0% | |
| AATCAGTGATACTACAAAAG+TGG | + | chr1.1:44573342-44573361 | None:intergenic | 30.0% | |
| AGAAGTTTAATCCTAAGAGA+GGG | - | chr1.1:44571901-44571920 | MS.gene071693:intron | 30.0% | |
| AGAATGGTCACTTCAAATAA+TGG | - | chr1.1:44574733-44574752 | MS.gene071693:intron | 30.0% | |
| AGATCTCAAGATTAATGAGT+TGG | - | chr1.1:44569403-44569422 | MS.gene071693:intron | 30.0% | |
| AGCATATCACAAAACATTAG+CGG | + | chr1.1:44569062-44569081 | None:intergenic | 30.0% | |
| AGCATGTCTAGTAATATGTT+CGG | - | chr1.1:44570199-44570218 | MS.gene071693:intron | 30.0% | |
| ATAATAGACACCTGATATTG+TGG | - | chr1.1:44573953-44573972 | MS.gene071693:intron | 30.0% | |
| ATATCAGGTGTCTATTATTC+TGG | + | chr1.1:44573951-44573970 | None:intergenic | 30.0% | |
| ATATGGTAGAAACATAGCTT+GGG | - | chr1.1:44569264-44569283 | MS.gene071693:intron | 30.0% | |
| ATCAGTGATACTACAAAAGT+GGG | + | chr1.1:44573341-44573360 | None:intergenic | 30.0% | |
| ATCTAGCCAAATTTAACTAG+TGG | + | chr1.1:44571110-44571129 | None:intergenic | 30.0% | |
| ATTTCACCAGTTTCCTTATA+GGG | + | chr1.1:44574305-44574324 | None:intergenic | 30.0% | |
| CAACATCCATGATCTTAAAA+AGG | + | chr1.1:44570080-44570099 | None:intergenic | 30.0% | |
| CAAGATACCAATCACATATT+AGG | - | chr1.1:44572956-44572975 | MS.gene071693:intron | 30.0% | |
| CAATAATTAAAACCTTGCTG+AGG | - | chr1.1:44570460-44570479 | MS.gene071693:intron | 30.0% | |
| CGTTAAGATCTTTGTAATTG+AGG | - | chr1.1:44574508-44574527 | MS.gene071693:intron | 30.0% | |
| GAAAGTTACTTAGAAACATC+TGG | - | chr1.1:44571827-44571846 | MS.gene071693:intron | 30.0% | |
| GAAATGTTAGAATCCTCAAA+TGG | + | chr1.1:44570547-44570566 | None:intergenic | 30.0% | |
| GAAATTTACATTACTGTCAC+TGG | + | chr1.1:44574554-44574573 | None:intergenic | 30.0% | |
| GAATATAAACATGTCAGATG+AGG | + | chr1.1:44573598-44573617 | None:intergenic | 30.0% | |
| GAATGAAACTTATTGCATCT+AGG | - | chr1.1:44572930-44572949 | MS.gene071693:intron | 30.0% | |
| GAATTATCTAGAGATAAAGG+AGG | - | chr1.1:44574684-44574703 | MS.gene071693:intron | 30.0% | |
| GATTTATTACCAGGTAAGTT+TGG | - | chr1.1:44569841-44569860 | MS.gene071693:intron | 30.0% | |
| GTAAAGAACAGGGTTTAATA+TGG | - | chr1.1:44569692-44569711 | MS.gene071693:intron | 30.0% | |
| GTAGATTAATATGCTTTCGA+TGG | + | chr1.1:44570837-44570856 | None:intergenic | 30.0% | |
| TAAGTTTCACGTGTTTAGTT+TGG | + | chr1.1:44571573-44571592 | None:intergenic | 30.0% | |
| TAGTACAATGTGTTGTCAAA+TGG | - | chr1.1:44569085-44569104 | MS.gene071693:intron | 30.0% | |
| TATATCACATAAAACCCCAT+AGG | + | chr1.1:44568843-44568862 | None:intergenic | 30.0% | |
| TATGGACATGAAGAGTTTAA+AGG | + | chr1.1:44570601-44570620 | None:intergenic | 30.0% | |
| TATTTGTATACTACAAGCTG+TGG | + | chr1.1:44573743-44573762 | None:intergenic | 30.0% | |
| TCATTCCAAATTACATCAAG+GGG | + | chr1.1:44572916-44572935 | None:intergenic | 30.0% | |
| TCCTTGGAAGTTTATTTGTT+AGG | - | chr1.1:44572989-44573008 | MS.gene071693:intron | 30.0% | |
| TCTAAACAAAGATCTTACAC+TGG | - | chr1.1:44570660-44570679 | MS.gene071693:CDS | 30.0% | |
| TGCCAGTTAATTAGAAAATC+AGG | - | chr1.1:44572301-44572320 | MS.gene071693:intron | 30.0% | |
| TGGATTGATATGGAATAGTT+TGG | - | chr1.1:44570329-44570348 | MS.gene071693:intron | 30.0% | |
| TTAAAGATATCAAATCTGCG+CGG | - | chr1.1:44572369-44572388 | MS.gene071693:intron | 30.0% | |
| TTAGTTATAAGCACGTGAAA+GGG | + | chr1.1:44571991-44572010 | None:intergenic | 30.0% | |
| TTATCGTAGAACCTTAAGAT+GGG | - | chr1.1:44568891-44568910 | MS.gene071693:intron | 30.0% | |
| TTATTTGGGTAAGAGTTCTT+TGG | - | chr1.1:44574213-44574232 | MS.gene071693:intron | 30.0% | |
| TTTAGTTATAAGCACGTGAA+AGG | + | chr1.1:44571992-44572011 | None:intergenic | 30.0% | |
| TTTATACAGACATCATGTGT+TGG | + | chr1.1:44572495-44572514 | None:intergenic | 30.0% | |
| TTTATCGTAGAACCTTAAGA+TGG | - | chr1.1:44568890-44568909 | MS.gene071693:intron | 30.0% | |
| TTTCGATGGAAAAGATGTTA+TGG | + | chr1.1:44570823-44570842 | None:intergenic | 30.0% | |
| ! | AAGTTTCACGTGTTTAGTTT+GGG | + | chr1.1:44571572-44571591 | None:intergenic | 30.0% |
| ! | ACCACCTTTTGTAGAAAATA+TGG | - | chr1.1:44569247-44569266 | MS.gene071693:intron | 30.0% |
| ! | ACCATATTTTCTACAAAAGG+TGG | + | chr1.1:44569251-44569270 | None:intergenic | 30.0% |
| ! | ATGTATGTCAGATCATTTTG+TGG | - | chr1.1:44572642-44572661 | MS.gene071693:intron | 30.0% |
| ! | CAAAATTGATTCCTATTGGT+TGG | - | chr1.1:44574909-44574928 | MS.gene071693:intron | 30.0% |
| ! | CCTTGGAAGTTTATTTGTTA+GGG | - | chr1.1:44572990-44573009 | MS.gene071693:intron | 30.0% |
| ! | GTGGATTTTTGCATTGTATT+TGG | + | chr1.1:44573724-44573743 | None:intergenic | 30.0% |
| ! | TCACTAAGCCTATTAATTTG+TGG | + | chr1.1:44571948-44571967 | None:intergenic | 30.0% |
| ! | TCTCATTTTACTGAATTGTG+GGG | - | chr1.1:44570423-44570442 | MS.gene071693:intron | 30.0% |
| ! | TCTGTTTTCTTCTTTTGTCT+TGG | - | chr1.1:44569886-44569905 | MS.gene071693:intron | 30.0% |
| ! | TGCATTGTATTTGGATTTTG+AGG | + | chr1.1:44573715-44573734 | None:intergenic | 30.0% |
| !! | GTATGTTGTCACTTTATCTT+TGG | - | chr1.1:44571273-44571292 | MS.gene071693:intron | 30.0% |
| !! | TATCCGTAATCATTGATTCA+TGG | + | chr1.1:44570381-44570400 | None:intergenic | 30.0% |
| !! | TTTCCTTATCAGAAGTGTTA+TGG | - | chr1.1:44574864-44574883 | MS.gene071693:intron | 30.0% |
| !! | TTTTGTGGTTGATATTATGG+TGG | - | chr1.1:44572657-44572676 | MS.gene071693:intron | 30.0% |
| !!! | AGTCATTATTTTTTGTCCCA+AGG | - | chr1.1:44570625-44570644 | MS.gene071693:intron | 30.0% |
| !!! | GTTTTGTAGTTTGGTTTTGA+TGG | - | chr1.1:44569912-44569931 | MS.gene071693:intron | 30.0% |
| !!! | TCGTGTTTTTGGTATATTAG+CGG | - | chr1.1:44574482-44574501 | MS.gene071693:intron | 30.0% |
| AAAAGAATCTTGTGTGCCAT+TGG | - | chr1.1:44572515-44572534 | MS.gene071693:intron | 35.0% | |
| AAAGATGTTATGGTTGTGGA+TGG | + | chr1.1:44570813-44570832 | None:intergenic | 35.0% | |
| AAATGTTAGAATCCTCAGCA+AGG | + | chr1.1:44570475-44570494 | None:intergenic | 35.0% | |
| AACCATGAGAAAAACATTCG+AGG | + | chr1.1:44573077-44573096 | None:intergenic | 35.0% | |
| AACCATTAAGTGAACTGTGA+AGG | - | chr1.1:44574152-44574171 | MS.gene071693:intron | 35.0% | |
| AAGGGTAGTCAAATCACTAA+AGG | - | chr1.1:44569338-44569357 | MS.gene071693:intron | 35.0% | |
| AATGATGAAGCTATAAGCGT+GGG | + | chr1.1:44571347-44571366 | None:intergenic | 35.0% | |
| ACAGTATATTGATCTTGAGC+TGG | + | chr1.1:44571647-44571666 | None:intergenic | 35.0% | |
| AGAGATAAGTTTGAGTCTTG+AGG | + | chr1.1:44572417-44572436 | None:intergenic | 35.0% | |
| AGTCTACACAAAACCAGATA+GGG | + | chr1.1:44573366-44573385 | None:intergenic | 35.0% | |
| ATATGGAATAGTTTGGCACT+AGG | - | chr1.1:44570336-44570355 | MS.gene071693:intron | 35.0% | |
| ATGTCAGATGAGGGTAATTT+AGG | + | chr1.1:44573588-44573607 | None:intergenic | 35.0% | |
| ATTACGATTCTTTGCATGCA+CGG | - | chr1.1:44572166-44572185 | MS.gene071693:intron | 35.0% | |
| CAACTGCATTTATCCATTTG+AGG | - | chr1.1:44570531-44570550 | MS.gene071693:intron | 35.0% | |
| CAATTGAGAGTTCCAGAATA+TGG | - | chr1.1:44568490-44568509 | MS.gene071693:CDS | 35.0% | |
| CCCTAACAAATAAACTTCCA+AGG | + | chr1.1:44572993-44573012 | None:intergenic | 35.0% | |
| CTATCTGCAGTCCAAATAAT+CGG | - | chr1.1:44573526-44573545 | MS.gene071693:CDS | 35.0% | |
| CTCAAATGGATAAATGCAGT+TGG | + | chr1.1:44570533-44570552 | None:intergenic | 35.0% | |
| CTCCTTACCACAAAATCTAT+AGG | + | chr1.1:44569305-44569324 | None:intergenic | 35.0% | |
| CTTTACAACATATGCACTTC+TGG | - | chr1.1:44569802-44569821 | MS.gene071693:intron | 35.0% | |
| GACGGTTTCCACAAATTAAT+AGG | - | chr1.1:44571937-44571956 | MS.gene071693:intron | 35.0% | |
| GAGAAAATGAAACACCTTCT+GGG | + | chr1.1:44568524-44568543 | None:intergenic | 35.0% | |
| GAGAAGTTTAATCCTAAGAG+AGG | - | chr1.1:44571900-44571919 | MS.gene071693:intron | 35.0% | |
| GAGATATATAGCCTAGATCA+CGG | + | chr1.1:44574590-44574609 | None:intergenic | 35.0% | |
| GATCTTGCAATGAACAGTAT+TGG | + | chr1.1:44571135-44571154 | None:intergenic | 35.0% | |
| GATTTCACCAGTTTCCTTAT+AGG | + | chr1.1:44574306-44574325 | None:intergenic | 35.0% | |
| GCAAAGAATCGTAATTTGGT+GGG | + | chr1.1:44572161-44572180 | None:intergenic | 35.0% | |
| GCACATCAAGTAAGATATGT+TGG | + | chr1.1:44569769-44569788 | None:intergenic | 35.0% | |
| GCATGCAAAGAATCGTAATT+TGG | + | chr1.1:44572165-44572184 | None:intergenic | 35.0% | |
| GCATTTCTTTGAGTGTACTT+TGG | - | chr1.1:44568783-44568802 | MS.gene071693:intron | 35.0% | |
| GCTGTCATTGCGTTATTTAA+AGG | + | chr1.1:44570859-44570878 | None:intergenic | 35.0% | |
| GGCAAGACAAGATATATAGA+AGG | - | chr1.1:44574628-44574647 | MS.gene071693:intron | 35.0% | |
| GTACACCACCTTAAAATTCA+AGG | + | chr1.1:44571750-44571769 | None:intergenic | 35.0% | |
| GTTGTAAAGAAAGCAAGACT+TGG | + | chr1.1:44569791-44569810 | None:intergenic | 35.0% | |
| TAATGATGAAGCTATAAGCG+TGG | + | chr1.1:44571348-44571367 | None:intergenic | 35.0% | |
| TAATTAGGCTAAATCCCTAG+TGG | + | chr1.1:44574335-44574354 | None:intergenic | 35.0% | |
| TACAATGTGTTGTCAAATGG+CGG | - | chr1.1:44569088-44569107 | MS.gene071693:intron | 35.0% | |
| TAGTCTACACAAAACCAGAT+AGG | + | chr1.1:44573367-44573386 | None:intergenic | 35.0% | |
| TAGTTATAAGCACGTGAAAG+GGG | + | chr1.1:44571990-44572009 | None:intergenic | 35.0% | |
| TATCAACGATCCACAATATC+AGG | + | chr1.1:44573966-44573985 | None:intergenic | 35.0% | |
| TCAATGCTATATAGTACCTC+TGG | + | chr1.1:44568734-44568753 | None:intergenic | 35.0% | |
| TCACCATAACACTTCTGATA+AGG | + | chr1.1:44574870-44574889 | None:intergenic | 35.0% | |
| TGAGAAAATGAAACACCTTC+TGG | + | chr1.1:44568525-44568544 | None:intergenic | 35.0% | |
| TGCAAAAACATTTAGCACAG+AGG | + | chr1.1:44569949-44569968 | None:intergenic | 35.0% | |
| TGCAAAGAATCGTAATTTGG+TGG | + | chr1.1:44572162-44572181 | None:intergenic | 35.0% | |
| TGGAAAAGATGTTATGGTTG+TGG | + | chr1.1:44570817-44570836 | None:intergenic | 35.0% | |
| TGGAAAGGAAAATGAGAGAA+TGG | - | chr1.1:44574717-44574736 | MS.gene071693:intron | 35.0% | |
| TGTTGGAATAGGTAATTGAG+TGG | - | chr1.1:44574265-44574284 | MS.gene071693:intron | 35.0% | |
| TTACCAGGTAAGTTTGGTAT+TGG | - | chr1.1:44569847-44569866 | MS.gene071693:intron | 35.0% | |
| TTACTTAGAAACATCTGGGA+AGG | - | chr1.1:44571832-44571851 | MS.gene071693:intron | 35.0% | |
| TTAGAGTGTGTACAAATGAG+TGG | + | chr1.1:44574459-44574478 | None:intergenic | 35.0% | |
| TTCACAGTTCACTTAATGGT+TGG | + | chr1.1:44574153-44574172 | None:intergenic | 35.0% | |
| TTTCACCAGTTTCCTTATAG+GGG | + | chr1.1:44574304-44574323 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCTAACAAAGCT+AGG | - | chr1.1:44571200-44571219 | MS.gene071693:intron | 35.0% |
| ! | AGGACATAACTGATAACGAT+AGG | + | chr1.1:44572397-44572416 | None:intergenic | 35.0% |
| ! | AGTTTATTTGTTAGGGCCTT+AGG | - | chr1.1:44572997-44573016 | MS.gene071693:intron | 35.0% |
| ! | CACTCTAAATGTCGTGTTTT+TGG | - | chr1.1:44574471-44574490 | MS.gene071693:intron | 35.0% |
| ! | CAGGATCTGTTGTTTGTTAA+GGG | - | chr1.1:44572320-44572339 | MS.gene071693:intron | 35.0% |
| ! | CGGGTTTTTGCTAAGTAATA+TGG | - | chr1.1:44572784-44572803 | MS.gene071693:intron | 35.0% |
| ! | CTCATTTTACTGAATTGTGG+GGG | - | chr1.1:44570424-44570443 | MS.gene071693:intron | 35.0% |
| ! | GACCTATAGATTTTGTGGTA+AGG | - | chr1.1:44569300-44569319 | MS.gene071693:intron | 35.0% |
| ! | GACTGAGGAGAGAATAATTT+TGG | + | chr1.1:44573693-44573712 | None:intergenic | 35.0% |
| ! | GAGAAGACCTATAGATTTTG+TGG | - | chr1.1:44569295-44569314 | MS.gene071693:intron | 35.0% |
| ! | GGTATCAGAGCTTATCTTTT+TGG | - | chr1.1:44574432-44574451 | MS.gene071693:intron | 35.0% |
| ! | GTTTATTTGTTAGGGCCTTA+GGG | - | chr1.1:44572998-44573017 | MS.gene071693:intron | 35.0% |
| ! | TCAGGATCTGTTGTTTGTTA+AGG | - | chr1.1:44572319-44572338 | MS.gene071693:intron | 35.0% |
| ! | TCTTCCCATGTTTAGGTTAT+AGG | - | chr1.1:44574662-44574681 | MS.gene071693:intron | 35.0% |
| ! | TTTATTTGTTAGGGCCTTAG+GGG | - | chr1.1:44572999-44573018 | MS.gene071693:intron | 35.0% |
| !! | AAAAGTACCGCATAAGCTTA+AGG | - | chr1.1:44568862-44568881 | MS.gene071693:intron | 35.0% |
| !! | GAACCTAGCTTTGTTAGAAA+AGG | + | chr1.1:44571206-44571225 | None:intergenic | 35.0% |
| !! | GCTATTTTCTTCCCATGTTT+AGG | - | chr1.1:44574655-44574674 | MS.gene071693:intron | 35.0% |
| !! | GGAGTAACTTGTTAAATGGA+AGG | + | chr1.1:44571326-44571345 | None:intergenic | 35.0% |
| !! | GTAACTTGTTAAATGGAAGG+AGG | + | chr1.1:44571323-44571342 | None:intergenic | 35.0% |
| !! | TATTTGGATTTTGAGGACTG+AGG | + | chr1.1:44573708-44573727 | None:intergenic | 35.0% |
| !! | TCTGTGCTAAATGTTTTTGC+AGG | - | chr1.1:44569948-44569967 | MS.gene071693:intron | 35.0% |
| !! | TCTTGGTGTGTTTTGTAGTT+TGG | - | chr1.1:44569903-44569922 | MS.gene071693:intron | 35.0% |
| !! | TGATCTTCTAGTTTCACAGT+CGG | - | chr1.1:44574123-44574142 | MS.gene071693:intron | 35.0% |
| !! | TGCAATGTGTACCGATTATT+TGG | + | chr1.1:44573540-44573559 | None:intergenic | 35.0% |
| !! | TTCTGTTAGAGTACTGGTAT+TGG | - | chr1.1:44573027-44573046 | MS.gene071693:intron | 35.0% |
| !!! | AGTGATGTTTCTTTTCAGGT+TGG | - | chr1.1:44574814-44574833 | MS.gene071693:CDS | 35.0% |
| !!! | CGTGTTTTTGGTATATTAGC+GGG | - | chr1.1:44574483-44574502 | MS.gene071693:intron | 35.0% |
| !!! | TGTACTTTGGTTTTGAACTC+CGG | - | chr1.1:44568796-44568815 | MS.gene071693:intron | 35.0% |
| AAACGCGAACCTTAATGTGA+TGG | - | chr1.1:44574992-44575011 | MS.gene071693:CDS | 40.0% | |
| AACCCTTGGAAGGACTAATT+AGG | + | chr1.1:44574350-44574369 | None:intergenic | 40.0% | |
| AATCTCAAAAGCTAGCTCAG+GGG | + | chr1.1:44574386-44574405 | None:intergenic | 40.0% | |
| ACTCCAATACCAAACTTACC+TGG | + | chr1.1:44569853-44569872 | None:intergenic | 40.0% | |
| ACTGGAGTATGTAGAAATGC+GGG | + | chr1.1:44574536-44574555 | None:intergenic | 40.0% | |
| AGAAATTCTCAACCCTTGGA+AGG | + | chr1.1:44574360-44574379 | None:intergenic | 40.0% | |
| AGCCTAATTAGTCCTTCCAA+GGG | - | chr1.1:44574345-44574364 | MS.gene071693:intron | 40.0% | |
| AGCCTTCACAGTTCACTTAA+TGG | + | chr1.1:44574157-44574176 | None:intergenic | 40.0% | |
| AGGCGCTTAATAATGAGCAA+AGG | + | chr1.1:44571246-44571265 | None:intergenic | 40.0% | |
| AGTCCAGTGTTGTCAAATAG+CGG | - | chr1.1:44569010-44569029 | MS.gene071693:intron | 40.0% | |
| AGTGGCAATATGCAATCATC+AGG | + | chr1.1:44571092-44571111 | None:intergenic | 40.0% | |
| AGTTATAAGCACGTGAAAGG+GGG | + | chr1.1:44571989-44572008 | None:intergenic | 40.0% | |
| ATAACAGCTGTTCACAGATC+AGG | + | chr1.1:44572067-44572086 | None:intergenic | 40.0% | |
| ATCGACCTCTTGCTAATAGA+AGG | + | chr1.1:44574086-44574105 | None:intergenic | 40.0% | |
| ATTAGACATGGGGACATTAG+AGG | - | chr1.1:44569212-44569231 | MS.gene071693:intron | 40.0% | |
| ATTAGGCTCATGCAATTCCT+TGG | - | chr1.1:44572973-44572992 | MS.gene071693:intron | 40.0% | |
| ATTTGGCGACTGGATTGATA+TGG | - | chr1.1:44570319-44570338 | MS.gene071693:intron | 40.0% | |
| CAAACTATGGTACTGTCTAC+AGG | - | chr1.1:44571670-44571689 | MS.gene071693:intron | 40.0% | |
| CAACTCCCCTTGATGTAATT+TGG | - | chr1.1:44572908-44572927 | MS.gene071693:intron | 40.0% | |
| CAATCTCAAAAGCTAGCTCA+GGG | + | chr1.1:44574387-44574406 | None:intergenic | 40.0% | |
| CACCACCTTAAAATTCAAGG+TGG | + | chr1.1:44571747-44571766 | None:intergenic | 40.0% | |
| CACCTTAAAATTCAAGGTGG+TGG | + | chr1.1:44571744-44571763 | None:intergenic | 40.0% | |
| CACTGGAGTATGTAGAAATG+CGG | + | chr1.1:44574537-44574556 | None:intergenic | 40.0% | |
| CAGCTCCACTTAGTATGATA+AGG | - | chr1.1:44569478-44569497 | MS.gene071693:intron | 40.0% | |
| CCAACGCAACATTCTAATCT+CGG | + | chr1.1:44568980-44568999 | None:intergenic | 40.0% | |
| CCACTTAGTATGATAAGGCT+TGG | - | chr1.1:44569483-44569502 | MS.gene071693:intron | 40.0% | |
| CCTCTTGCTAATAGAAGGTA+AGG | + | chr1.1:44574081-44574100 | None:intergenic | 40.0% | |
| CCTTACCTTCTATTAGCAAG+AGG | - | chr1.1:44574078-44574097 | MS.gene071693:intron | 40.0% | |
| CGTACTAGTCATTCTGTCTA+AGG | - | chr1.1:44572691-44572710 | MS.gene071693:intron | 40.0% | |
| CTCATCACACAACAGAATAG+CGG | - | chr1.1:44574607-44574626 | MS.gene071693:intron | 40.0% | |
| CTTATCATACTAAGTGGAGC+TGG | + | chr1.1:44569480-44569499 | None:intergenic | 40.0% | |
| GATCATGATCGTAGAGACAA+AGG | - | chr1.1:44571151-44571170 | MS.gene071693:intron | 40.0% | |
| GCACATTTCTGTTAGAGTAC+TGG | - | chr1.1:44573021-44573040 | MS.gene071693:intron | 40.0% | |
| GCATGAGCCTAATATGTGAT+TGG | + | chr1.1:44572966-44572985 | None:intergenic | 40.0% | |
| GCTTTCCTGTTGAATCCAAA+GGG | - | chr1.1:44573403-44573422 | MS.gene071693:intron | 40.0% | |
| GGAATTACGTACAAGTTGTG+TGG | + | chr1.1:44571551-44571570 | None:intergenic | 40.0% | |
| GGATCATGCAGATTCTTAGA+TGG | - | chr1.1:44574411-44574430 | MS.gene071693:intron | 40.0% | |
| GTGAAATCACACATCCACTA+GGG | - | chr1.1:44574318-44574337 | MS.gene071693:intron | 40.0% | |
| TAAGGGTCTGTTAACAGTTC+AGG | - | chr1.1:44572337-44572356 | MS.gene071693:intron | 40.0% | |
| TAATAACTGCCACCATAGCA+GGG | - | chr1.1:44574013-44574032 | MS.gene071693:intron | 40.0% | |
| TAATAGATGCTAGAGGTGAC+TGG | + | chr1.1:44571499-44571518 | None:intergenic | 40.0% | |
| TAGCCTAATTAGTCCTTCCA+AGG | - | chr1.1:44574344-44574363 | MS.gene071693:intron | 40.0% | |
| TAGGATGGTCCATCACATTA+AGG | + | chr1.1:44575004-44575023 | None:intergenic | 40.0% | |
| TCAATCTCAAAAGCTAGCTC+AGG | + | chr1.1:44574388-44574407 | None:intergenic | 40.0% | |
| TCTTCTTTCGGAATGTACAG+AGG | - | chr1.1:44568702-44568721 | MS.gene071693:intron | 40.0% | |
| TGAGAGTTCCAGAATATGGT+TGG | - | chr1.1:44568494-44568513 | MS.gene071693:CDS | 40.0% | |
| TGCTGTATGAGATAGAGTGT+TGG | - | chr1.1:44568917-44568936 | MS.gene071693:intron | 40.0% | |
| TGGATGCAGCAGCATTTATT+TGG | - | chr1.1:44570302-44570321 | MS.gene071693:intron | 40.0% | |
| TGGTATACATGTTGCAACAG+CGG | - | chr1.1:44572804-44572823 | MS.gene071693:intron | 40.0% | |
| TGTTGTGGTTTATGCTGTTC+AGG | - | chr1.1:44570020-44570039 | MS.gene071693:intron | 40.0% | |
| TTAATCCTAAGAGAGGGAGT+AGG | - | chr1.1:44571907-44571926 | MS.gene071693:intron | 40.0% | |
| TTACCCAATGTTGTCAACCA+CGG | + | chr1.1:44569176-44569195 | None:intergenic | 40.0% | |
| TTAGACATGGGGACATTAGA+GGG | - | chr1.1:44569213-44569232 | MS.gene071693:intron | 40.0% | |
| ! | CACACAGCTCGATTCATTTT+TGG | - | chr1.1:44570100-44570119 | MS.gene071693:CDS | 40.0% |
| ! | CCAAGCCTTATCATACTAAG+TGG | + | chr1.1:44569486-44569505 | None:intergenic | 40.0% |
| ! | CTCAATTTTGTGGTGAATGC+AGG | - | chr1.1:44568541-44568560 | MS.gene071693:intron | 40.0% |
| ! | CTCCACCACCTTGAATTTTA+AGG | - | chr1.1:44571739-44571758 | MS.gene071693:intron | 40.0% |
| ! | GAAGAGTACAGTCAAGATCA+CGG | + | chr1.1:44572252-44572271 | None:intergenic | 40.0% |
| ! | GCAGCAGTTTTACTTTCACT+AGG | + | chr1.1:44570938-44570957 | None:intergenic | 40.0% |
| ! | GCTGTATGAGATAGAGTGTT+GGG | - | chr1.1:44568918-44568937 | MS.gene071693:intron | 40.0% |
| ! | GCTTTAAGTGCAAAACTGGA+TGG | - | chr1.1:44570956-44570975 | MS.gene071693:intron | 40.0% |
| ! | GTCCTCGAATGTTTTTCTCA+TGG | - | chr1.1:44573072-44573091 | MS.gene071693:intron | 40.0% |
| !! | CACCACCTTGAATTTTAAGG+TGG | - | chr1.1:44571742-44571761 | MS.gene071693:intron | 40.0% |
| !! | CGTGGGAGTAACTTGTTAAA+TGG | + | chr1.1:44571330-44571349 | None:intergenic | 40.0% |
| !! | GTATCACTGATTTCCCTATC+TGG | - | chr1.1:44573350-44573369 | MS.gene071693:intron | 40.0% |
| !! | TATTAGTGGGGTGTTGGAAT+AGG | - | chr1.1:44574254-44574273 | MS.gene071693:intron | 40.0% |
| !! | TGCTGCTTTAAGTGCAAAAC+TGG | - | chr1.1:44570952-44570971 | MS.gene071693:intron | 40.0% |
| !!! | GCTAGCTTTTGAGATTGAGT+TGG | - | chr1.1:44574390-44574409 | MS.gene071693:intron | 40.0% |
| !!! | GTACTTTGGTTTTGAACTCC+GGG | - | chr1.1:44568797-44568816 | MS.gene071693:intron | 40.0% |
| !!! | TACTTTGGTTTTGAACTCCG+GGG | - | chr1.1:44568798-44568817 | MS.gene071693:intron | 40.0% |
| AAGAGAGGGAGTAGGATATG+TGG | - | chr1.1:44571915-44571934 | MS.gene071693:intron | 45.0% | |
| AAGAGCTATTAGTGGGGTGT+TGG | - | chr1.1:44574248-44574267 | MS.gene071693:intron | 45.0% | |
| AATCGTGCGATTCTGTGAAC+AGG | + | chr1.1:44572202-44572221 | None:intergenic | 45.0% | |
| ACCAAACTGCAAGATACAGC+TGG | + | chr1.1:44571423-44571442 | None:intergenic | 45.0% | |
| ACCGTAGAGAAGAAAGCCAA+GGG | + | chr1.1:44572845-44572864 | None:intergenic | 45.0% | |
| ACTGAATTGTGGGGGACATT+TGG | - | chr1.1:44570432-44570451 | MS.gene071693:intron | 45.0% | |
| AGAATGACTAGTACGCTGAC+TGG | + | chr1.1:44572686-44572705 | None:intergenic | 45.0% | |
| AGAATGTTGCGTTGGATGTG+TGG | - | chr1.1:44568985-44569004 | MS.gene071693:intron | 45.0% | |
| AGCAGCATTTATTTGGCGAC+TGG | - | chr1.1:44570309-44570328 | MS.gene071693:intron | 45.0% | |
| AGTGACAACATACAGGACAC+AGG | + | chr1.1:44571266-44571285 | None:intergenic | 45.0% | |
| ATAAAGGAGGAGAGAGAGAG+TGG | - | chr1.1:44574697-44574716 | MS.gene071693:intron | 45.0% | |
| ATACAGCATCGCCCATCTTA+AGG | + | chr1.1:44568905-44568924 | None:intergenic | 45.0% | |
| ATATGGTTGGACTACCCAGA+AGG | - | chr1.1:44568507-44568526 | MS.gene071693:CDS | 45.0% | |
| ATCTCAAAAGCTAGCTCAGG+GGG | + | chr1.1:44574385-44574404 | None:intergenic | 45.0% | |
| ATGTTGTCAACCACGGATCA+CGG | + | chr1.1:44569169-44569188 | None:intergenic | 45.0% | |
| CATATCCTACTCCCTCTCTT+AGG | + | chr1.1:44571915-44571934 | None:intergenic | 45.0% | |
| CCGAGATTAGAATGTTGCGT+TGG | - | chr1.1:44568977-44568996 | MS.gene071693:intron | 45.0% | |
| CGCTTTCCTGTTGAATCCAA+AGG | - | chr1.1:44573402-44573421 | MS.gene071693:intron | 45.0% | |
| CTAACAGAAATGTGCCCCTA+AGG | + | chr1.1:44573016-44573035 | None:intergenic | 45.0% | |
| CTGGGCTGAGATTTATTACC+AGG | - | chr1.1:44569832-44569851 | MS.gene071693:intron | 45.0% | |
| CTGTGTGTGACCACTTTCTA+AGG | - | chr1.1:44571716-44571735 | MS.gene071693:intron | 45.0% | |
| GATCCGTGGTTGACAACATT+GGG | - | chr1.1:44569170-44569189 | MS.gene071693:intron | 45.0% | |
| GCTGTAGCACTGTTACATAG+CGG | - | chr1.1:44569121-44569140 | MS.gene071693:intron | 45.0% | |
| GGACATTAGAGGGAAAGTTG+GGG | - | chr1.1:44569223-44569242 | MS.gene071693:intron | 45.0% | |
| GGGACATTAGAGGGAAAGTT+GGG | - | chr1.1:44569222-44569241 | MS.gene071693:intron | 45.0% | |
| GGTGAAATCACACATCCACT+AGG | - | chr1.1:44574317-44574336 | MS.gene071693:intron | 45.0% | |
| GTAATAACTGCCACCATAGC+AGG | - | chr1.1:44574012-44574031 | MS.gene071693:intron | 45.0% | |
| TACGTACAAGTTGTGTGGCA+AGG | + | chr1.1:44571546-44571565 | None:intergenic | 45.0% | |
| TAGCCGCTATTTGACAACAC+TGG | + | chr1.1:44569016-44569035 | None:intergenic | 45.0% | |
| TCAACAACCTCACCCCTATA+AGG | - | chr1.1:44574289-44574308 | MS.gene071693:intron | 45.0% | |
| TCCAGCTGTATCTTGCAGTT+TGG | - | chr1.1:44571419-44571438 | MS.gene071693:intron | 45.0% | |
| TGATCCGTGGTTGACAACAT+TGG | - | chr1.1:44569169-44569188 | MS.gene071693:intron | 45.0% | |
| TGGGTAGTCCAACCATATTC+TGG | + | chr1.1:44568505-44568524 | None:intergenic | 45.0% | |
| TGGTCACACACAGTGTCTAT+AGG | + | chr1.1:44571709-44571728 | None:intergenic | 45.0% | |
| TGGTCACTGTTGTCAAGTAG+AGG | - | chr1.1:44570680-44570699 | MS.gene071693:intron | 45.0% | |
| ! | ATCGTAATTTGGTGGGAAGC+TGG | + | chr1.1:44572154-44572173 | None:intergenic | 45.0% |
| ! | CAAGAGGTATGCAATCTGAC+AGG | - | chr1.1:44573441-44573460 | MS.gene071693:intron | 45.0% |
| ! | CTGTCTAAGGTGTTCTTTGC+AGG | - | chr1.1:44572704-44572723 | MS.gene071693:intron | 45.0% |
| ! | GTTTCTTTGTTTGCTGCCCT+TGG | - | chr1.1:44572826-44572845 | MS.gene071693:intron | 45.0% |
| ! | TCGTAATTTGGTGGGAAGCT+GGG | + | chr1.1:44572153-44572172 | None:intergenic | 45.0% |
| !! | ACACAGTTCTCCTGGTTCTA+CGG | - | chr1.1:44572115-44572134 | MS.gene071693:intron | 45.0% |
| !! | ATGCACTTCTGGTCTTGTTC+TGG | - | chr1.1:44569813-44569832 | MS.gene071693:intron | 45.0% |
| !! | TGCACTTCTGGTCTTGTTCT+GGG | - | chr1.1:44569814-44569833 | MS.gene071693:intron | 45.0% |
| !! | TTGAAATAAAAAATAATAAA+AGG | + | chr1.1:44570898-44570917 | None:intergenic | 5.0% |
| !!! | TTTTAAAAATTTGAAAAATA+TGG | - | chr1.1:44570570-44570589 | MS.gene071693:intron | 5.0% |
| AAAATCCACCGCAGTGCACA+TGG | + | chr1.1:44570706-44570725 | None:intergenic | 50.0% | |
| ACCATAGCAGGGTCTAGAGA+AGG | - | chr1.1:44574024-44574043 | MS.gene071693:intron | 50.0% | |
| ACTAAGTGGAGCTGGCTACA+TGG | + | chr1.1:44569472-44569491 | None:intergenic | 50.0% | |
| ACTTGGCTTCAGTCCATCAG+TGG | + | chr1.1:44569986-44570005 | None:intergenic | 50.0% | |
| AGATCACGGCTGCTTAGAAG+CGG | + | chr1.1:44574576-44574595 | None:intergenic | 50.0% | |
| ATGCGCAGACGCAACAGAAT+CGG | - | chr1.1:44572085-44572104 | MS.gene071693:intron | 50.0% | |
| CACACAGAAACCGTAGAACC+AGG | + | chr1.1:44572128-44572147 | None:intergenic | 50.0% | |
| CACCGTAGAGAAGAAAGCCA+AGG | + | chr1.1:44572846-44572865 | None:intergenic | 50.0% | |
| CCACGGATCACGGAAAATAG+CGG | + | chr1.1:44569159-44569178 | None:intergenic | 50.0% | |
| CCAGTTTCCTTATAGGGGTG+AGG | + | chr1.1:44574299-44574318 | None:intergenic | 50.0% | |
| CCATAGCAGGGTCTAGAGAA+GGG | - | chr1.1:44574025-44574044 | MS.gene071693:intron | 50.0% | |
| CCTCACCCCTATAAGGAAAC+TGG | - | chr1.1:44574296-44574315 | MS.gene071693:intron | 50.0% | |
| CTATGGTACTGTCTACAGGC+AGG | - | chr1.1:44571674-44571693 | MS.gene071693:intron | 50.0% | |
| CTGCTATGGCCTGTGTATGA+AGG | - | chr1.1:44570735-44570754 | MS.gene071693:intron | 50.0% | |
| CTTCTAAGCAGCCGTGATCT+AGG | - | chr1.1:44574576-44574595 | MS.gene071693:intron | 50.0% | |
| GAATACAACCGTACCACAGG+AGG | + | chr1.1:44574056-44574075 | None:intergenic | 50.0% | |
| GAGAAGGGTTAAACCTCCTG+TGG | - | chr1.1:44574040-44574059 | MS.gene071693:intron | 50.0% | |
| GAGGGAGTAGGATATGTGGA+CGG | - | chr1.1:44571919-44571938 | MS.gene071693:intron | 50.0% | |
| GCTGAATACAACCGTACCAC+AGG | + | chr1.1:44574059-44574078 | None:intergenic | 50.0% | |
| GCTTTCTTCTCTACGGTGGA+AGG | - | chr1.1:44572848-44572867 | MS.gene071693:intron | 50.0% | |
| GGGCAGAAATTCTCAACCCT+TGG | + | chr1.1:44574364-44574383 | None:intergenic | 50.0% | |
| GGGGACATTAGAGGGAAAGT+TGG | - | chr1.1:44569221-44569240 | MS.gene071693:intron | 50.0% | |
| GGGTTAAACCTCCTGTGGTA+CGG | - | chr1.1:44574045-44574064 | MS.gene071693:intron | 50.0% | |
| TATGAAGGCTGGTGGCACAA+TGG | - | chr1.1:44570750-44570769 | MS.gene071693:intron | 50.0% | |
| TATGGCCTGTGTATGAAGGC+TGG | - | chr1.1:44570739-44570758 | MS.gene071693:intron | 50.0% | |
| TCTCAAAAGCTAGCTCAGGG+GGG | + | chr1.1:44574384-44574403 | None:intergenic | 50.0% | |
| TGAAATGGAGGAGGGCCTAT+GGG | - | chr1.1:44568825-44568844 | MS.gene071693:intron | 50.0% | |
| TGCGATTCTGTGAACAGGCT+AGG | + | chr1.1:44572197-44572216 | None:intergenic | 50.0% | |
| TGTACAGAGGTTACAGCCAG+AGG | - | chr1.1:44568715-44568734 | MS.gene071693:intron | 50.0% | |
| TTCTCTAGACCCTGCTATGG+TGG | + | chr1.1:44574025-44574044 | None:intergenic | 50.0% | |
| TTGAAATGGAGGAGGGCCTA+TGG | - | chr1.1:44568824-44568843 | MS.gene071693:intron | 50.0% | |
| ! | CATGGTGGAAGGCCAAAAAC+AGG | + | chr1.1:44570785-44570804 | None:intergenic | 50.0% |
| ! | CGTAATTTGGTGGGAAGCTG+GGG | + | chr1.1:44572152-44572171 | None:intergenic | 50.0% |
| ! | CTTGGCTTTCTTCTCTACGG+TGG | - | chr1.1:44572844-44572863 | MS.gene071693:intron | 50.0% |
| ! | GCCCTTGGCTTTCTTCTCTA+CGG | - | chr1.1:44572841-44572860 | MS.gene071693:intron | 50.0% |
| ! | TGGCGGAAATGGCCTGTTTT+TGG | - | chr1.1:44570770-44570789 | MS.gene071693:intron | 50.0% |
| !! | CTGGTTCTACGGTTTCTGTG+TGG | - | chr1.1:44572126-44572145 | MS.gene071693:intron | 50.0% |
| !!! | CTGTTTTTGGCCTTCCACCA+TGG | - | chr1.1:44570783-44570802 | MS.gene071693:intron | 50.0% |
| !!! | TTTGGTTTTGAACTCCGGGG+TGG | - | chr1.1:44568801-44568820 | MS.gene071693:intron | 50.0% |
| AGTAGAGGCCATGTGCACTG+CGG | - | chr1.1:44570695-44570714 | MS.gene071693:intron | 55.0% | |
| CAGCTTCTTACGACGCCCTT+TGG | + | chr1.1:44573421-44573440 | None:intergenic | 55.0% | |
| CCCTTCTCTAGACCCTGCTA+TGG | + | chr1.1:44574028-44574047 | None:intergenic | 55.0% | |
| CGACGCCCTTTGGATTCAAC+AGG | + | chr1.1:44573411-44573430 | None:intergenic | 55.0% | |
| CTCCTCCATTTCAACCACCC+CGG | + | chr1.1:44568818-44568837 | None:intergenic | 55.0% | |
| GAAATGGAGGAGGGCCTATG+GGG | - | chr1.1:44568826-44568845 | MS.gene071693:intron | 55.0% | |
| GAACTCCGGGGTGGTTGAAA+TGG | - | chr1.1:44568810-44568829 | MS.gene071693:intron | 55.0% | |
| GAGCTGGAATGCGAGTCACT+TGG | + | chr1.1:44571631-44571650 | None:intergenic | 55.0% | |
| GCACGTGCTGTATCCACTGA+TGG | - | chr1.1:44569970-44569989 | MS.gene071693:intron | 55.0% | |
| GCAGACGCAACAGAATCGGA+CGG | - | chr1.1:44572089-44572108 | MS.gene071693:intron | 55.0% | |
| GCAGTGCATAGCAGCAGTGA+CGG | - | chr1.1:44571854-44571873 | MS.gene071693:intron | 55.0% | |
| GCGTCGTAAGAAGCTGCAAG+AGG | - | chr1.1:44573425-44573444 | MS.gene071693:intron | 55.0% | |
| GGAGGAGAGAGAGAGTGGAA+AGG | - | chr1.1:44574702-44574721 | MS.gene071693:intron | 55.0% | |
| GGCACTAGGCTCGAAAGTCA+AGG | - | chr1.1:44570350-44570369 | MS.gene071693:intron | 55.0% | |
| GGGGTGGTTGAAATGGAGGA+GGG | - | chr1.1:44568817-44568836 | MS.gene071693:intron | 55.0% | |
| TGCCACCAGCCTTCATACAC+AGG | + | chr1.1:44570747-44570766 | None:intergenic | 55.0% | |
| TGGTTGTGGATGGCTGACCA+TGG | + | chr1.1:44570803-44570822 | None:intergenic | 55.0% | |
| TTGTGGATGGCTGACCATGG+TGG | + | chr1.1:44570800-44570819 | None:intergenic | 55.0% | |
| ! | TGGTGGCACAATGGCGGAAA+TGG | - | chr1.1:44570759-44570778 | MS.gene071693:intron | 55.0% |
| !! | CCGCTATTTTCCGTGATCCG+TGG | - | chr1.1:44569156-44569175 | MS.gene071693:intron | 55.0% |
| !! | GGTGGTGGAGCCTTAGAAAG+TGG | + | chr1.1:44571729-44571748 | None:intergenic | 55.0% |
| AAGCACGTGAAAGGGGGCGA+CGG | + | chr1.1:44571983-44572002 | None:intergenic | 60.0% | |
| CACAGATCAGGTCTGCGACC+TGG | + | chr1.1:44572055-44572074 | None:intergenic | 60.0% | |
| CGGGGTGGTTGAAATGGAGG+AGG | - | chr1.1:44568816-44568835 | MS.gene071693:intron | 60.0% | |
| CTCCGGGGTGGTTGAAATGG+AGG | - | chr1.1:44568813-44568832 | MS.gene071693:intron | 60.0% | |
| GAAGGCTGGTGGCACAATGG+CGG | - | chr1.1:44570753-44570772 | MS.gene071693:intron | 60.0% | |
| GACGGTGCACACAGTTCTCC+TGG | - | chr1.1:44572107-44572126 | MS.gene071693:intron | 60.0% | |
| GGCCTGTGTATGAAGGCTGG+TGG | - | chr1.1:44570742-44570761 | MS.gene071693:intron | 60.0% | |
| ! | GGATGGCTGACCATGGTGGA+AGG | + | chr1.1:44570796-44570815 | None:intergenic | 60.0% |
| AGAGGCCATGTGCACTGCGG+TGG | - | chr1.1:44570698-44570717 | MS.gene071693:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 44568472 | 44575046 | 44568472 | ID=MS.gene071693 |
| chr1.1 | mRNA | 44568472 | 44575046 | 44568472 | ID=MS.gene071693.t1;Parent=MS.gene071693 |
| chr1.1 | exon | 44574956 | 44575046 | 44574956 | ID=MS.gene071693.t1.exon1;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44574956 | 44575046 | 44574956 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44574782 | 44574834 | 44574782 | ID=MS.gene071693.t1.exon2;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44574782 | 44574834 | 44574782 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44573665 | 44573757 | 44573665 | ID=MS.gene071693.t1.exon3;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44573665 | 44573757 | 44573665 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44573477 | 44573548 | 44573477 | ID=MS.gene071693.t1.exon4;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44573477 | 44573548 | 44573477 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44570793 | 44570865 | 44570793 | ID=MS.gene071693.t1.exon5;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44570793 | 44570865 | 44570793 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44570649 | 44570694 | 44570649 | ID=MS.gene071693.t1.exon6;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44570649 | 44570694 | 44570649 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44570072 | 44570135 | 44570072 | ID=MS.gene071693.t1.exon7;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44570072 | 44570135 | 44570072 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44568633 | 44568686 | 44568633 | ID=MS.gene071693.t1.exon8;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44568633 | 44568686 | 44568633 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| chr1.1 | exon | 44568472 | 44568549 | 44568472 | ID=MS.gene071693.t1.exon9;Parent=MS.gene071693.t1 |
| chr1.1 | CDS | 44568472 | 44568549 | 44568472 | ID=cds.MS.gene071693.t1;Parent=MS.gene071693.t1 |
| Gene Sequence |
| Protein sequence |
