Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074465.t1 | XP_003627378.2 | 99.1 | 219 | 2 | 0 | 1 | 219 | 12 | 230 | 1.60E-124 | 455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074465.t1 | Q9LQI7 | 71.5 | 214 | 60 | 1 | 1 | 213 | 12 | 225 | 1.3e-93 | 344.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074465.t1 | G7L8D3 | 99.1 | 219 | 2 | 0 | 1 | 219 | 12 | 230 | 1.2e-124 | 455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene074465 | 0.83694 | 6.97E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene074465 | -0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene074465 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene074465 | 0.8 | 1.77E-48 | -1.69E-46 |
| MS.gene050721 | MS.gene074465 | 0.804878 | 1.75E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene074465 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene050815 | MS.gene074465 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene051063 | MS.gene074465 | 0.935155 | 1.32E-96 | -1.69E-46 |
| MS.gene051245 | MS.gene074465 | 0.819443 | 1.16E-52 | -1.69E-46 |
| MS.gene051330 | MS.gene074465 | 0.808101 | 3.65E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene074465 | 0.844741 | 6.27E-59 | -1.69E-46 |
| MS.gene051746 | MS.gene074465 | 0.826225 | 3.05E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene074465 | 0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene052048 | MS.gene074465 | -0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene052256 | MS.gene074465 | 0.816096 | 6.59E-52 | -1.69E-46 |
| MS.gene052286 | MS.gene074465 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene074465 | 0.838507 | 2.76E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene074465 | 0.841653 | 4.17E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene074465 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene074465 | 0.81342 | 2.58E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene074465 | 0.815743 | 7.90E-52 | -1.69E-46 |
| MS.gene053132 | MS.gene074465 | 0.827564 | 1.46E-54 | -1.69E-46 |
| MS.gene053437 | MS.gene074465 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene074465 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene074465 | -0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene055591 | MS.gene074465 | -0.811493 | 6.81E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene074465 | -0.811614 | 6.41E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene074465 | -0.828636 | 8.05E-55 | -1.69E-46 |
| MS.gene056432 | MS.gene074465 | 0.821248 | 4.47E-53 | -1.69E-46 |
| MS.gene056601 | MS.gene074465 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene074465 | 0.839268 | 1.75E-57 | -1.69E-46 |
| MS.gene056760 | MS.gene074465 | 0.825695 | 4.07E-54 | -1.69E-46 |
| MS.gene057057 | MS.gene074465 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene074465 | 0.820799 | 5.67E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene074465 | 0.815693 | 8.11E-52 | -1.69E-46 |
| MS.gene057260 | MS.gene074465 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene074465 | 0.806321 | 8.71E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene074465 | 0.807152 | 5.81E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene074465 | 0.803648 | 3.15E-49 | -1.69E-46 |
| MS.gene058798 | MS.gene074465 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene074465 | 0.888787 | 4.33E-73 | -1.69E-46 |
| MS.gene059898 | MS.gene074465 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene074465 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene074465 | 0.888772 | 4.39E-73 | -1.69E-46 |
| MS.gene060429 | MS.gene074465 | 0.826613 | 2.46E-54 | -1.69E-46 |
| MS.gene060586 | MS.gene074465 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene060619 | MS.gene074465 | 0.824566 | 7.53E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074465.t1 | MTR_8g022330 | 99.087 | 219 | 2 | 0 | 1 | 219 | 12 | 230 | 6.41e-163 | 449 |
| MS.gene074465.t1 | MTR_8g087310 | 30.198 | 202 | 109 | 7 | 21 | 211 | 135 | 315 | 3.58e-13 | 68.2 |
| MS.gene074465.t1 | MTR_8g087310 | 30.198 | 202 | 109 | 7 | 21 | 211 | 254 | 434 | 3.85e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074465.t1 | AT1G17350 | 71.495 | 214 | 60 | 1 | 1 | 213 | 12 | 225 | 9.52e-119 | 337 |
| MS.gene074465.t1 | AT1G17350 | 71.495 | 214 | 60 | 1 | 1 | 213 | 12 | 225 | 9.52e-119 | 337 |
| MS.gene074465.t1 | AT1G17350 | 71.495 | 214 | 60 | 1 | 1 | 213 | 12 | 225 | 9.52e-119 | 337 |
| MS.gene074465.t1 | AT1G17350 | 71.495 | 214 | 60 | 1 | 1 | 213 | 12 | 225 | 9.52e-119 | 337 |
| MS.gene074465.t1 | AT1G17350 | 69.340 | 212 | 56 | 2 | 1 | 203 | 12 | 223 | 8.77e-110 | 315 |
| MS.gene074465.t1 | AT1G72420 | 67.442 | 215 | 68 | 2 | 1 | 213 | 12 | 226 | 8.26e-109 | 312 |
| MS.gene074465.t1 | AT1G72420 | 67.442 | 215 | 68 | 2 | 1 | 213 | 12 | 226 | 8.26e-109 | 312 |
| MS.gene074465.t1 | AT1G72420 | 67.464 | 209 | 66 | 2 | 7 | 213 | 7 | 215 | 2.04e-105 | 303 |
| MS.gene074465.t1 | AT1G72420 | 63.115 | 122 | 44 | 1 | 1 | 121 | 12 | 133 | 5.75e-52 | 166 |
| MS.gene074465.t1 | AT1G72420 | 63.115 | 122 | 44 | 1 | 1 | 121 | 12 | 133 | 1.19e-51 | 164 |
| MS.gene074465.t1 | AT1G72420 | 63.115 | 122 | 44 | 1 | 1 | 121 | 12 | 133 | 1.19e-51 | 164 |
Find 46 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTATTCTGATTCTGAATT+TGG | 0.164131 | 8.2:+73380476 | MS.gene074465:CDS |
| TGCAATATACCAGTTATCTT+TGG | 0.216625 | 8.2:-73381864 | None:intergenic |
| ACGATAGCTATGAAACTTAA+AGG | 0.245721 | 8.2:+73381629 | MS.gene074465:CDS |
| CAGATACCTGAATCTGAAAA+TGG | 0.295053 | 8.2:+73380620 | MS.gene074465:CDS |
| TGCAGATATACACGGAGAAT+TGG | 0.328795 | 8.2:+73381786 | MS.gene074465:intron |
| TTGATTTCAACAGCTATATC+TGG | 0.331646 | 8.2:+73380374 | MS.gene074465:intron |
| CAAAACCTATACTACATCAT+TGG | 0.343817 | 8.2:-73384107 | None:intergenic |
| GCAATATACCAGTTATCTTT+GGG | 0.348274 | 8.2:-73381863 | None:intergenic |
| TTGTGGAATGCGCTCCAAAA+AGG | 0.350095 | 8.2:+73380724 | MS.gene074465:CDS |
| TTTACGTGCCCAAAGATAAC+TGG | 0.351126 | 8.2:+73381855 | MS.gene074465:CDS |
| CCAAGCAAGAATTATCAAAA+TGG | 0.360136 | 8.2:+73380450 | MS.gene074465:CDS |
| ATTTCAGACTTGAACTTGAA+TGG | 0.375010 | 8.2:+73384060 | MS.gene074465:CDS |
| GGTGTCCCAGGTGCTAGATC+TGG | 0.377828 | 8.2:+73384029 | MS.gene074465:CDS |
| ATGAATCCATCACGTGTTCT+TGG | 0.389127 | 8.2:+73383978 | MS.gene074465:CDS |
| CATTGGGTTCTCACTTCTCA+TGG | 0.392116 | 8.2:-73384090 | None:intergenic |
| TCTGAAAATGGTAAAACTAC+TGG | 0.430983 | 8.2:+73380632 | MS.gene074465:CDS |
| CTCTGGGAATCTTTCACTTG+AGG | 0.435126 | 8.2:+73380661 | MS.gene074465:CDS |
| TATTCTGATTCTGAATTTGG+AGG | 0.441704 | 8.2:+73380479 | MS.gene074465:CDS |
| AAAACCTATACTACATCATT+GGG | 0.453436 | 8.2:-73384106 | None:intergenic |
| AATGCCGAGGGTGGTGTCCC+AGG | 0.459127 | 8.2:+73384017 | MS.gene074465:CDS |
| GCAGATATACACGGAGAATT+GGG | 0.459883 | 8.2:+73381787 | MS.gene074465:intron |
| GTTTGATGGCTTCATTGACT+TGG | 0.463757 | 8.2:+73381595 | MS.gene074465:intron |
| CCTGGTCCAGATCTAGCACC+TGG | 0.491978 | 8.2:-73384035 | None:intergenic |
| TCAATGGATGCTACTAAGAA+AGG | 0.500994 | 8.2:+73380292 | None:intergenic |
| GCTATGAAACTTAAAGGAGA+TGG | 0.505648 | 8.2:+73381635 | MS.gene074465:CDS |
| GAGTTGTCCTCCATCTGTCC+AGG | 0.525035 | 8.2:-73381818 | None:intergenic |
| TAGCTCGATATGTACCTACT+TGG | 0.540332 | 8.2:+73383925 | MS.gene074465:CDS |
| CTTTCACTTGAGGTTACTCA+AGG | 0.540859 | 8.2:+73380671 | MS.gene074465:CDS |
| GGTTAACTCACCTGGACAGA+TGG | 0.543070 | 8.2:+73381808 | MS.gene074465:CDS |
| AAGTGGAATATTAGTAGAGG+TGG | 0.553563 | 8.2:+73380698 | MS.gene074465:CDS |
| GCTAAGTGGAATATTAGTAG+AGG | 0.567692 | 8.2:+73380695 | MS.gene074465:CDS |
| GACAGATGGAGGACAACTCA+TGG | 0.575304 | 8.2:+73381822 | MS.gene074465:CDS |
| AGCACCTGGGACACCACCCT+CGG | 0.576679 | 8.2:-73384021 | None:intergenic |
| CCAGGTGCTAGATCTGGACC+AGG | 0.581357 | 8.2:+73384035 | MS.gene074465:CDS |
| GAGAATTGGGTTAACTCACC+TGG | 0.591802 | 8.2:+73381800 | MS.gene074465:CDS |
| AGGTTACTCAAGGTGCTAAG+TGG | 0.593770 | 8.2:+73380681 | MS.gene074465:CDS |
| CGATATGTACCTACTTGGAG+AGG | 0.604855 | 8.2:+73383930 | MS.gene074465:CDS |
| GACATGCCAAGAACACGTGA+TGG | 0.606451 | 8.2:-73383984 | None:intergenic |
| GTAGGTACATATCGAGCTAG+AGG | 0.608047 | 8.2:-73383921 | None:intergenic |
| AGATAACTGGTATATTGCAA+AGG | 0.608700 | 8.2:+73381868 | MS.gene074465:CDS |
| AGTTCAAGTCTGAAATCACC+TGG | 0.640637 | 8.2:-73384053 | None:intergenic |
| ATAACGTTCCCTCTCCAAGT+AGG | 0.644498 | 8.2:-73383939 | None:intergenic |
| TAACTCACCTGGACAGATGG+AGG | 0.644910 | 8.2:+73381811 | MS.gene074465:CDS |
| GATATGTACCTACTTGGAGA+GGG | 0.669899 | 8.2:+73383931 | MS.gene074465:CDS |
| GATTATGGTGCAGATATACA+CGG | 0.690928 | 8.2:+73381778 | MS.gene074465:intron |
| CTGGTCCAGATCTAGCACCT+GGG | 0.695025 | 8.2:-73384034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATCAATTTAATGAA+TGG | + | chr8.2:73382754-73382773 | MS.gene074465:intron | 10.0% |
| !!! | TTATTTTTTGATATAGAAAT+AGG | - | chr8.2:73380928-73380947 | None:intergenic | 10.0% |
| !! | CAATGTTAATATATTATTGA+TGG | - | chr8.2:73380881-73380900 | None:intergenic | 15.0% |
| !! | TTTAAATAATCAATTCAAAC+AGG | + | chr8.2:73381103-73381122 | MS.gene074465:intron | 15.0% |
| !!! | AAGTTGAATATATATTTTTC+AGG | - | chr8.2:73380425-73380444 | None:intergenic | 15.0% |
| !!! | CAGAAAAAATATAGAATTTT+TGG | + | chr8.2:73382110-73382129 | MS.gene074465:intron | 15.0% |
| !!! | TTAAAAAACACTATCATTTT+AGG | - | chr8.2:73382919-73382938 | None:intergenic | 15.0% |
| !!! | TTGATTTTGAAGAAAAAAAA+GGG | + | chr8.2:73383615-73383634 | MS.gene074465:intron | 15.0% |
| !!! | TTTGATTTTGAAGAAAAAAA+AGG | + | chr8.2:73383614-73383633 | MS.gene074465:intron | 15.0% |
| !! | ACCAAATAATTTAAACTTTG+GGG | - | chr8.2:73382798-73382817 | None:intergenic | 20.0% |
| !! | ATAACAAGTACAAAATCAAT+GGG | - | chr8.2:73383308-73383327 | None:intergenic | 20.0% |
| !! | ATTGAATTGAATTGTATGAT+TGG | + | chr8.2:73381505-73381524 | MS.gene074465:intron | 20.0% |
| !! | CACCAAATAATTTAAACTTT+GGG | - | chr8.2:73382799-73382818 | None:intergenic | 20.0% |
| !! | TATAACAAGTACAAAATCAA+TGG | - | chr8.2:73383309-73383328 | None:intergenic | 20.0% |
| !! | TATCAAAATATGCTATGTTA+TGG | - | chr8.2:73381995-73382014 | None:intergenic | 20.0% |
| !! | TCACCAAATAATTTAAACTT+TGG | - | chr8.2:73382800-73382819 | None:intergenic | 20.0% |
| !!! | ACTTTGGTTAATTTAATTTC+TGG | + | chr8.2:73380532-73380551 | MS.gene074465:intron | 20.0% |
| !!! | ATTTGGCATTTTAAAAGAAA+AGG | - | chr8.2:73381688-73381707 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTCAGATAAAAA+AGG | - | chr8.2:73382289-73382308 | None:intergenic | 20.0% |
| !!! | CTTTGGTTAATTTAATTTCT+GGG | + | chr8.2:73380533-73380552 | MS.gene074465:intron | 20.0% |
| !!! | TATTTTTGTCTATTTTGTTC+TGG | + | chr8.2:73383396-73383415 | MS.gene074465:intron | 20.0% |
| !!! | TGATTTTGAAGAAAAAAAAG+GGG | + | chr8.2:73383616-73383635 | MS.gene074465:intron | 20.0% |
| !!! | TTAAATTATTTGGTGAAATC+AGG | + | chr8.2:73382804-73382823 | MS.gene074465:intron | 20.0% |
| !!! | TTGAATATATATTTTTCAGG+TGG | - | chr8.2:73380422-73380441 | None:intergenic | 20.0% |
| !!! | TTTTTATAATAAGTCACGTT+TGG | - | chr8.2:73382179-73382198 | None:intergenic | 20.0% |
| ! | AAATTTCCTAGGATATCATT+TGG | - | chr8.2:73381705-73381724 | None:intergenic | 25.0% |
| ! | AATGAGATAGTATACATTTG+TGG | - | chr8.2:73382538-73382557 | None:intergenic | 25.0% |
| ! | AATGCAACAAATGAATCATA+AGG | + | chr8.2:73382947-73382966 | MS.gene074465:intron | 25.0% |
| ! | AATTCAATTCAATATGCACT+AGG | - | chr8.2:73381498-73381517 | None:intergenic | 25.0% |
| ! | AGCTAATAAGTCAATTCAAA+CGG | + | chr8.2:73381445-73381464 | MS.gene074465:intron | 25.0% |
| ! | ATTACTAGTGTTGTCAAATA+TGG | + | chr8.2:73380829-73380848 | MS.gene074465:intron | 25.0% |
| ! | ATTCAGATAAAAAAGGAAAC+GGG | - | chr8.2:73382282-73382301 | None:intergenic | 25.0% |
| ! | CATTCAGATAAAAAAGGAAA+CGG | - | chr8.2:73382283-73382302 | None:intergenic | 25.0% |
| ! | CTTTACAAACAAGTTCAAAT+TGG | - | chr8.2:73383039-73383058 | None:intergenic | 25.0% |
| ! | GAAAACAACTTATAGCTTAT+AGG | - | chr8.2:73380970-73380989 | None:intergenic | 25.0% |
| ! | TAAGCTAAATTTAGCTACAA+CGG | + | chr8.2:73383221-73383240 | MS.gene074465:intron | 25.0% |
| ! | TATCTATTGAGTAAACACTT+GGG | + | chr8.2:73383586-73383605 | MS.gene074465:intron | 25.0% |
| ! | TATTGTAACTAGTTGGATTA+TGG | + | chr8.2:73381763-73381782 | MS.gene074465:intron | 25.0% |
| ! | TCAAATTGTTAATGTTGTTC+AGG | + | chr8.2:73380578-73380597 | MS.gene074465:intron | 25.0% |
| ! | TCCCCAAAGTTTAAATTATT+TGG | + | chr8.2:73382794-73382813 | MS.gene074465:intron | 25.0% |
| ! | TCTATGTATATGTAAGTGAA+GGG | + | chr8.2:73383775-73383794 | MS.gene074465:intron | 25.0% |
| ! | TCTATTTAACAATGAAGTTC+TGG | + | chr8.2:73382379-73382398 | MS.gene074465:intron | 25.0% |
| ! | TTATCTATTGAGTAAACACT+TGG | + | chr8.2:73383585-73383604 | MS.gene074465:intron | 25.0% |
| ! | TTCTATGTATATGTAAGTGA+AGG | + | chr8.2:73383774-73383793 | MS.gene074465:intron | 25.0% |
| ! | TTGTATTCTGATTCTGAATT+TGG | + | chr8.2:73380476-73380495 | MS.gene074465:CDS | 25.0% |
| ! | TTTCTCTATTAGGAAAATAG+CGG | + | chr8.2:73382047-73382066 | MS.gene074465:intron | 25.0% |
| !! | ATAGCATTGAATTGTATGAA+TGG | + | chr8.2:73381168-73381187 | MS.gene074465:intron | 25.0% |
| !! | ATGATAACCTGTAATTTTGT+AGG | + | chr8.2:73382447-73382466 | MS.gene074465:intron | 25.0% |
| !! | ATTTTCCTAATAGAGAAACT+AGG | - | chr8.2:73382045-73382064 | None:intergenic | 25.0% |
| !! | CAATTTGAACTTGTTTGTAA+AGG | + | chr8.2:73383037-73383056 | MS.gene074465:intron | 25.0% |
| !! | TATGATTCATTTGTTGCATT+TGG | - | chr8.2:73382947-73382966 | None:intergenic | 25.0% |
| !! | TGACTTATTAGCTTATCTAA+TGG | - | chr8.2:73381438-73381457 | None:intergenic | 25.0% |
| !!! | AATATATATTTTTCAGGTGG+TGG | - | chr8.2:73380419-73380438 | None:intergenic | 25.0% |
| AAAATGCCAAATGATATCCT+AGG | + | chr8.2:73381696-73381715 | MS.gene074465:intron | 30.0% | |
| AAACTAGAATCAAGAGTTTG+AGG | + | chr8.2:73382853-73382872 | MS.gene074465:intron | 30.0% | |
| AAGCTAAATTTAGCTACAAC+GGG | + | chr8.2:73383222-73383241 | MS.gene074465:intron | 30.0% | |
| AAGTTTGCAATGAAACCAAA+AGG | + | chr8.2:73383149-73383168 | MS.gene074465:intron | 30.0% | |
| AATACGTCCTACAAAATTAC+AGG | - | chr8.2:73382457-73382476 | None:intergenic | 30.0% | |
| ACGATAGCTATGAAACTTAA+AGG | + | chr8.2:73381629-73381648 | MS.gene074465:CDS | 30.0% | |
| ACTATCCTAGTTTCTCTATT+AGG | + | chr8.2:73382037-73382056 | MS.gene074465:intron | 30.0% | |
| ACTTCGATTATGCAAATTTC+TGG | + | chr8.2:73382731-73382750 | MS.gene074465:intron | 30.0% | |
| AGATAACTGGTATATTGCAA+AGG | + | chr8.2:73381868-73381887 | MS.gene074465:CDS | 30.0% | |
| AGCGAAGCTTACATATTAAA+AGG | - | chr8.2:73382254-73382273 | None:intergenic | 30.0% | |
| AGGAAATACTATAAACGGAT+AGG | + | chr8.2:73383650-73383669 | MS.gene074465:intron | 30.0% | |
| AGTCAACTATACACAAGAAA+AGG | - | chr8.2:73382313-73382332 | None:intergenic | 30.0% | |
| ATATACATAGAAAGCCAACA+AGG | - | chr8.2:73383766-73383785 | None:intergenic | 30.0% | |
| ATCTATTGAGTAAACACTTG+GGG | + | chr8.2:73383587-73383606 | MS.gene074465:intron | 30.0% | |
| ATTTCAGACTTGAACTTGAA+TGG | + | chr8.2:73384060-73384079 | MS.gene074465:CDS | 30.0% | |
| CAATATTGTCGTTGAACAAA+TGG | - | chr8.2:73381472-73381491 | None:intergenic | 30.0% | |
| CATATCGATCATTACTAATC+AGG | - | chr8.2:73381924-73381943 | None:intergenic | 30.0% | |
| CCAAGCAAGAATTATCAAAA+TGG | + | chr8.2:73380450-73380469 | MS.gene074465:CDS | 30.0% | |
| CTAAAAGAATAGTTGTTGCT+TGG | + | chr8.2:73383733-73383752 | MS.gene074465:intron | 30.0% | |
| GATATCCTAGGAAATTTAGA+GGG | + | chr8.2:73381708-73381727 | MS.gene074465:intron | 30.0% | |
| GCAATATACCAGTTATCTTT+GGG | - | chr8.2:73381866-73381885 | None:intergenic | 30.0% | |
| TAAATAGAAGATAGCATTGC+AGG | - | chr8.2:73382367-73382386 | None:intergenic | 30.0% | |
| TATTCTGATTCTGAATTTGG+AGG | + | chr8.2:73380479-73380498 | MS.gene074465:CDS | 30.0% | |
| TCAATATTACTAAAGAGCGA+CGG | - | chr8.2:73383267-73383286 | None:intergenic | 30.0% | |
| TCTGAAAATGGTAAAACTAC+TGG | + | chr8.2:73380632-73380651 | MS.gene074465:CDS | 30.0% | |
| TGACTTATTTCAATGACATG+CGG | + | chr8.2:73382328-73382347 | MS.gene074465:intron | 30.0% | |
| TGATATCCTAGGAAATTTAG+AGG | + | chr8.2:73381707-73381726 | MS.gene074465:intron | 30.0% | |
| TGCAATATACCAGTTATCTT+TGG | - | chr8.2:73381867-73381886 | None:intergenic | 30.0% | |
| TGGTCAGGAAATACTATAAA+CGG | + | chr8.2:73383645-73383664 | MS.gene074465:intron | 30.0% | |
| TTAAAAGAAAAGGACACTCA+CGG | - | chr8.2:73381678-73381697 | None:intergenic | 30.0% | |
| TTAGCTTATCTAATGGCATA+AGG | - | chr8.2:73381431-73381450 | None:intergenic | 30.0% | |
| TTCAGATAAAAAAGGAAACG+GGG | - | chr8.2:73382281-73382300 | None:intergenic | 30.0% | |
| TTCTCTATTAGGAAAATAGC+GGG | + | chr8.2:73382048-73382067 | MS.gene074465:intron | 30.0% | |
| TTGAGATTAAGGACTAGATA+AGG | + | chr8.2:73382609-73382628 | MS.gene074465:intron | 30.0% | |
| TTGAGTGATTATAGTGTAAG+CGG | + | chr8.2:73381240-73381259 | MS.gene074465:intron | 30.0% | |
| TTGATTTCAACAGCTATATC+TGG | + | chr8.2:73380374-73380393 | MS.gene074465:intron | 30.0% | |
| TTGTTTGTAAAGGAGGTTAA+CGG | + | chr8.2:73383047-73383066 | MS.gene074465:intron | 30.0% | |
| ! | AAAACTACTGGAATTTTCTC+TGG | + | chr8.2:73380644-73380663 | MS.gene074465:CDS | 30.0% |
| ! | AAACTACTGGAATTTTCTCT+GGG | + | chr8.2:73380645-73380664 | MS.gene074465:CDS | 30.0% |
| ! | AAATTTAGCTTAGTAGAGCT+AGG | - | chr8.2:73383213-73383232 | None:intergenic | 30.0% |
| ! | AGTTAAAAAAGCCACCTTTT+TGG | - | chr8.2:73380741-73380760 | None:intergenic | 30.0% |
| ! | CTACGTTTTGCAATTTAATC+AGG | - | chr8.2:73382568-73382587 | None:intergenic | 30.0% |
| ! | CTATCATTTTAGGCATGTAA+AGG | - | chr8.2:73382909-73382928 | None:intergenic | 30.0% |
| ! | GTTGCTAAAGTTTGAAACTT+TGG | + | chr8.2:73380516-73380535 | MS.gene074465:intron | 30.0% |
| ! | GTTTTACCATTTTCAGATTC+AGG | - | chr8.2:73380629-73380648 | None:intergenic | 30.0% |
| ! | TCAAAGACTTTAGTGTTGTT+TGG | + | chr8.2:73380760-73380779 | MS.gene074465:intron | 30.0% |
| ! | TCACAAGTTTTTATGCTAGT+GGG | + | chr8.2:73381075-73381094 | MS.gene074465:intron | 30.0% |
| ! | TTGCAAGTATTGTAACTAGT+TGG | + | chr8.2:73381756-73381775 | MS.gene074465:intron | 30.0% |
| ! | TTTGAACTTGTTTGTAAAGG+AGG | + | chr8.2:73383040-73383059 | MS.gene074465:intron | 30.0% |
| !! | AGAAAAAAAAGGGGTTTTGA+TGG | + | chr8.2:73383625-73383644 | MS.gene074465:intron | 30.0% |
| !! | CCATTTTGATAATTCTTGCT+TGG | - | chr8.2:73380453-73380472 | None:intergenic | 30.0% |
| !! | TCTGTGTTTTTGTAGTTTGA+TGG | + | chr8.2:73381581-73381600 | MS.gene074465:intron | 30.0% |
| !! | TTCTCATTTTTGTTCAACGA+CGG | + | chr8.2:73381535-73381554 | MS.gene074465:intron | 30.0% |
| AAGCTATCTTGTAGAGCTTA+TGG | + | chr8.2:73380992-73381011 | MS.gene074465:intron | 35.0% | |
| AAGTGGAATATTAGTAGAGG+TGG | + | chr8.2:73380698-73380717 | MS.gene074465:CDS | 35.0% | |
| AAGTTCGACAACAACATAGA+TGG | + | chr8.2:73381136-73381155 | MS.gene074465:intron | 35.0% | |
| AATGATCGATATGTTCGACT+AGG | + | chr8.2:73381931-73381950 | MS.gene074465:intron | 35.0% | |
| ACTATTGTAAAACCTTGCAG+TGG | - | chr8.2:73382676-73382695 | None:intergenic | 35.0% | |
| ATTGTGGTCTGATCTAGTAT+GGG | + | chr8.2:73383427-73383446 | MS.gene074465:intron | 35.0% | |
| CAAAAACACAGAATTGCGTA+AGG | - | chr8.2:73381573-73381592 | None:intergenic | 35.0% | |
| CAGATACCTGAATCTGAAAA+TGG | + | chr8.2:73380620-73380639 | MS.gene074465:CDS | 35.0% | |
| CATCACTTCAGTGCTTAATA+TGG | - | chr8.2:73383816-73383835 | None:intergenic | 35.0% | |
| GATTATGGTGCAGATATACA+CGG | + | chr8.2:73381778-73381797 | MS.gene074465:intron | 35.0% | |
| GCTAAGTGGAATATTAGTAG+AGG | + | chr8.2:73380695-73380714 | MS.gene074465:CDS | 35.0% | |
| GCTATGAAACTTAAAGGAGA+TGG | + | chr8.2:73381635-73381654 | MS.gene074465:CDS | 35.0% | |
| GTAAGCAGTAAGATGGAAAT+GGG | - | chr8.2:73381899-73381918 | None:intergenic | 35.0% | |
| GTATATGTAAGTGAAGGGAT+GGG | + | chr8.2:73383780-73383799 | MS.gene074465:intron | 35.0% | |
| TAAAGGACCAACTAAATTGC+AGG | - | chr8.2:73382892-73382911 | None:intergenic | 35.0% | |
| TATTGTGGTCTGATCTAGTA+TGG | + | chr8.2:73383426-73383445 | MS.gene074465:intron | 35.0% | |
| TCAAACCCTCTAAATTTCCT+AGG | - | chr8.2:73381716-73381735 | None:intergenic | 35.0% | |
| TCAGATAAAAAAGGAAACGG+GGG | - | chr8.2:73382280-73382299 | None:intergenic | 35.0% | |
| TGTAAGCAGTAAGATGGAAA+TGG | - | chr8.2:73381900-73381919 | None:intergenic | 35.0% | |
| TGTATATGTAAGTGAAGGGA+TGG | + | chr8.2:73383779-73383798 | MS.gene074465:intron | 35.0% | |
| TGTTGTCGAACTTGAACAAA+GGG | - | chr8.2:73381129-73381148 | None:intergenic | 35.0% | |
| TTGTTGTCGAACTTGAACAA+AGG | - | chr8.2:73381130-73381149 | None:intergenic | 35.0% | |
| ! | ATGGGTTTCTTCATGTTTTC+TGG | - | chr8.2:73383123-73383142 | None:intergenic | 35.0% |
| ! | ATTTAAACTTTGGGGAGAGT+TGG | - | chr8.2:73382790-73382809 | None:intergenic | 35.0% |
| ! | CTCAATGATTTTGCAGTGTT+TGG | + | chr8.2:73381206-73381225 | MS.gene074465:intron | 35.0% |
| ! | CTCACAAGTTTTTATGCTAG+TGG | + | chr8.2:73381074-73381093 | MS.gene074465:intron | 35.0% |
| ! | GGGTTTGAAGTTTCATTTCA+TGG | + | chr8.2:73381728-73381747 | MS.gene074465:intron | 35.0% |
| ! | TCTGTGAGATTGTTTGAGTT+GGG | - | chr8.2:73383100-73383119 | None:intergenic | 35.0% |
| !! | ATTAGTAGAGGTGGATTTTG+TGG | + | chr8.2:73380707-73380726 | MS.gene074465:CDS | 35.0% |
| !! | TAGTGTTGAGGTTTTTGTTG+CGG | - | chr8.2:73382021-73382040 | None:intergenic | 35.0% |
| !! | TTGTTTGAGTTGGGATTATG+AGG | - | chr8.2:73383091-73383110 | None:intergenic | 35.0% |
| AAGGAGATGTGAGACTCTAT+GGG | - | chr8.2:73381412-73381431 | None:intergenic | 40.0% | |
| AGAAAGCCAAAAATCCGTCA+GGG | - | chr8.2:73380857-73380876 | None:intergenic | 40.0% | |
| AGAGCTAGGTTTCAACTCAT+CGG | - | chr8.2:73383199-73383218 | None:intergenic | 40.0% | |
| ATGAATCCATCACGTGTTCT+TGG | + | chr8.2:73383978-73383997 | MS.gene074465:CDS | 40.0% | |
| CAAAACGTAGTTACCTTGAC+GGG | + | chr8.2:73382578-73382597 | MS.gene074465:intron | 40.0% | |
| CATTGCAAACTTGCAACGAT+GGG | - | chr8.2:73383141-73383160 | None:intergenic | 40.0% | |
| CTAAATTTAGCTACAACGGG+AGG | + | chr8.2:73383225-73383244 | MS.gene074465:intron | 40.0% | |
| CTTTCACTTGAGGTTACTCA+AGG | + | chr8.2:73380671-73380690 | MS.gene074465:CDS | 40.0% | |
| GAAATCAGGTTAACTCGCTT+AGG | + | chr8.2:73382818-73382837 | MS.gene074465:intron | 40.0% | |
| GAACAAGCCTGCAATTTAGT+TGG | + | chr8.2:73382882-73382901 | MS.gene074465:intron | 40.0% | |
| GAGAAACTAGGATAGTGTTG+AGG | - | chr8.2:73382033-73382052 | None:intergenic | 40.0% | |
| GATATGTACCTACTTGGAGA+GGG | + | chr8.2:73383931-73383950 | MS.gene074465:CDS | 40.0% | |
| GATCTAGTATGGGTTTAAGC+TGG | + | chr8.2:73383437-73383456 | MS.gene074465:intron | 40.0% | |
| GCAAAACGTAGTTACCTTGA+CGG | + | chr8.2:73382577-73382596 | MS.gene074465:intron | 40.0% | |
| GCAGATATACACGGAGAATT+GGG | + | chr8.2:73381787-73381806 | MS.gene074465:intron | 40.0% | |
| GTCTGTGAGATTGTTTGAGT+TGG | - | chr8.2:73383101-73383120 | None:intergenic | 40.0% | |
| TAAGGAGATGTGAGACTCTA+TGG | - | chr8.2:73381413-73381432 | None:intergenic | 40.0% | |
| TAGCTCGATATGTACCTACT+TGG | + | chr8.2:73383925-73383944 | MS.gene074465:CDS | 40.0% | |
| TCATTGCAAACTTGCAACGA+TGG | - | chr8.2:73383142-73383161 | None:intergenic | 40.0% | |
| TGCAGATATACACGGAGAAT+TGG | + | chr8.2:73381786-73381805 | MS.gene074465:intron | 40.0% | |
| TGTTCTGGTCTGTTCTATTG+TGG | + | chr8.2:73383411-73383430 | MS.gene074465:intron | 40.0% | |
| TTGTAAAACCTTGCAGTGGA+TGG | - | chr8.2:73382672-73382691 | None:intergenic | 40.0% | |
| TTTACGTGCCCAAAGATAAC+TGG | + | chr8.2:73381855-73381874 | MS.gene074465:CDS | 40.0% | |
| ! | AGTTCAAGTCTGAAATCACC+TGG | - | chr8.2:73384056-73384075 | None:intergenic | 40.0% |
| ! | GTAATTTTCCATCCACTGCA+AGG | + | chr8.2:73382661-73382680 | MS.gene074465:intron | 40.0% |
| ! | GTTTGATGGCTTCATTGACT+TGG | + | chr8.2:73381595-73381614 | MS.gene074465:intron | 40.0% |
| ! | TCAGGTTGTAAGCAGTAAGA+TGG | - | chr8.2:73381906-73381925 | None:intergenic | 40.0% |
| ! | TCTTTTTCTGTCAATGCCGA+GGG | + | chr8.2:73384005-73384024 | MS.gene074465:CDS | 40.0% |
| !! | AAAAAGGGGTTTTGATGGTC+AGG | + | chr8.2:73383630-73383649 | MS.gene074465:intron | 40.0% |
| !! | GGGCTTGAACTTTGAGATTA+AGG | + | chr8.2:73382598-73382617 | MS.gene074465:intron | 40.0% |
| AGGAGATGTGAGACTCTATG+GGG | - | chr8.2:73381411-73381430 | None:intergenic | 45.0% | |
| AGGTTTCAACTCATCGGAGT+TGG | - | chr8.2:73383193-73383212 | None:intergenic | 45.0% | |
| AGTGAAGGGATGGGTATCAT+TGG | + | chr8.2:73383789-73383808 | MS.gene074465:intron | 45.0% | |
| ATAACGTTCCCTCTCCAAGT+AGG | - | chr8.2:73383942-73383961 | None:intergenic | 45.0% | |
| CAGAAAGCCAAAAATCCGTC+AGG | - | chr8.2:73380858-73380877 | None:intergenic | 45.0% | |
| CATATCGAGCTAGAGGAATC+TGG | - | chr8.2:73383917-73383936 | None:intergenic | 45.0% | |
| CATTGGGTTCTCACTTCTCA+TGG | - | chr8.2:73384093-73384112 | None:intergenic | 45.0% | |
| CGATATGTACCTACTTGGAG+AGG | + | chr8.2:73383930-73383949 | MS.gene074465:CDS | 45.0% | |
| GAGAATTGGGTTAACTCACC+TGG | + | chr8.2:73381800-73381819 | MS.gene074465:CDS | 45.0% | |
| GGTTTCAACTCATCGGAGTT+GGG | - | chr8.2:73383192-73383211 | None:intergenic | 45.0% | |
| GTAGGTACATATCGAGCTAG+AGG | - | chr8.2:73383924-73383943 | None:intergenic | 45.0% | |
| GTATGGGTTTAAGCTGGATC+TGG | + | chr8.2:73383443-73383462 | MS.gene074465:intron | 45.0% | |
| GTTGGGTTCATTCATCAGGT+TGG | - | chr8.2:73383175-73383194 | None:intergenic | 45.0% | |
| TTGTGGAATGCGCTCCAAAA+AGG | + | chr8.2:73380724-73380743 | MS.gene074465:CDS | 45.0% | |
| ! | AGGTTACTCAAGGTGCTAAG+TGG | + | chr8.2:73380681-73380700 | MS.gene074465:CDS | 45.0% |
| ! | CTCTGGGAATCTTTCACTTG+AGG | + | chr8.2:73380661-73380680 | MS.gene074465:CDS | 45.0% |
| ! | GTCTTTTTCTGTCAATGCCG+AGG | + | chr8.2:73384004-73384023 | MS.gene074465:CDS | 45.0% |
| !!! | CATTCATCAGGTTGGCCTTT+TGG | - | chr8.2:73383167-73383186 | None:intergenic | 45.0% |
| !!! | TGCTTGGTTTTGTGCCTTGT+TGG | + | chr8.2:73383749-73383768 | MS.gene074465:intron | 45.0% |
| ACACCACCACAAATCACCTG+AGG | - | chr8.2:73383469-73383488 | None:intergenic | 50.0% | |
| ACTAAAGAGCGACGGATGAC+TGG | - | chr8.2:73383259-73383278 | None:intergenic | 50.0% | |
| ACTAGCTGACGCAGTTGCAA+TGG | + | chr8.2:73382087-73382106 | MS.gene074465:intron | 50.0% | |
| ATCTGGCCTCAGGTGATTTG+TGG | + | chr8.2:73383460-73383479 | MS.gene074465:intron | 50.0% | |
| CGGAGTTGGGTTCATTCATC+AGG | - | chr8.2:73383179-73383198 | None:intergenic | 50.0% | |
| CTCAAAGTTCAAGCCCGTCA+AGG | - | chr8.2:73382594-73382613 | None:intergenic | 50.0% | |
| GACAGATGGAGGACAACTCA+TGG | + | chr8.2:73381822-73381841 | MS.gene074465:CDS | 50.0% | |
| GACATGCCAAGAACACGTGA+TGG | - | chr8.2:73383987-73384006 | None:intergenic | 50.0% | |
| GGAGATGTGAGACTCTATGG+GGG | - | chr8.2:73381410-73381429 | None:intergenic | 50.0% | |
| GGTTAACTCACCTGGACAGA+TGG | + | chr8.2:73381808-73381827 | MS.gene074465:CDS | 50.0% | |
| TAACTCACCTGGACAGATGG+AGG | + | chr8.2:73381811-73381830 | MS.gene074465:CDS | 50.0% | |
| TGGAATGCGCTCCAAAAAGG+TGG | + | chr8.2:73380727-73380746 | MS.gene074465:intron | 50.0% | |
| TGTCAAATATGGCGCCCTGA+CGG | + | chr8.2:73380840-73380859 | MS.gene074465:intron | 50.0% | |
| TTTAAGCTGGATCTGGCCTC+AGG | + | chr8.2:73383450-73383469 | MS.gene074465:intron | 50.0% | |
| ! | AGGTGATTTGTGGTGGTGTG+GGG | + | chr8.2:73383470-73383489 | MS.gene074465:intron | 50.0% |
| ! | CAGGTGATTTGTGGTGGTGT+GGG | + | chr8.2:73383469-73383488 | MS.gene074465:intron | 50.0% |
| ! | TCAGGTGATTTGTGGTGGTG+TGG | + | chr8.2:73383468-73383487 | MS.gene074465:intron | 50.0% |
| ! | TTTTCTGTCAATGCCGAGGG+TGG | + | chr8.2:73384008-73384027 | MS.gene074465:CDS | 50.0% |
| CTGCGTCAGCTAGTAGAGAC+TGG | - | chr8.2:73382081-73382100 | None:intergenic | 55.0% | |
| CTGGTCCAGATCTAGCACCT+GGG | - | chr8.2:73384037-73384056 | None:intergenic | 55.0% | |
| GAGTTGTCCTCCATCTGTCC+AGG | - | chr8.2:73381821-73381840 | None:intergenic | 55.0% | |
| ! | TGATTTGTGGTGGTGTGGGG+TGG | + | chr8.2:73383473-73383492 | MS.gene074465:intron | 55.0% |
| ! | TGGCCTCAGGTGATTTGTGG+TGG | + | chr8.2:73383463-73383482 | MS.gene074465:intron | 55.0% |
| !!! | ATGGCGCCCTGACGGATTTT+TGG | + | chr8.2:73380848-73380867 | MS.gene074465:intron | 55.0% |
| AGAGCGACGGATGACTGGAC+TGG | - | chr8.2:73383254-73383273 | None:intergenic | 60.0% | |
| CCAGGTGCTAGATCTGGACC+AGG | + | chr8.2:73384035-73384054 | MS.gene074465:CDS | 60.0% | |
| CCTGGTCCAGATCTAGCACC+TGG | - | chr8.2:73384038-73384057 | None:intergenic | 60.0% | |
| GAGCGACGGATGACTGGACT+GGG | - | chr8.2:73383253-73383272 | None:intergenic | 60.0% | |
| GGTGTCCCAGGTGCTAGATC+TGG | + | chr8.2:73384029-73384048 | MS.gene074465:CDS | 60.0% | |
| AATGCCGAGGGTGGTGTCCC+AGG | + | chr8.2:73384017-73384036 | MS.gene074465:CDS | 65.0% | |
| AGCACCTGGGACACCACCCT+CGG | - | chr8.2:73384024-73384043 | None:intergenic | 65.0% | |
| TGGTGTGGGGTGGTGCGGTA+CGG | + | chr8.2:73383483-73383502 | MS.gene074465:intron | 65.0% | |
| ! | TGTGGTGGTGTGGGGTGGTG+CGG | + | chr8.2:73383478-73383497 | MS.gene074465:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 73380295 | 73384118 | 73380295 | ID=MS.gene074465 |
| chr8.2 | mRNA | 73380295 | 73384118 | 73380295 | ID=MS.gene074465.t1;Parent=MS.gene074465 |
| chr8.2 | exon | 73380295 | 73380313 | 73380295 | ID=MS.gene074465.t1.exon1;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73380295 | 73380313 | 73380295 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| chr8.2 | exon | 73380387 | 73380500 | 73380387 | ID=MS.gene074465.t1.exon2;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73380387 | 73380500 | 73380387 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| chr8.2 | exon | 73380600 | 73380745 | 73380600 | ID=MS.gene074465.t1.exon3;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73380600 | 73380745 | 73380600 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| chr8.2 | exon | 73381596 | 73381676 | 73381596 | ID=MS.gene074465.t1.exon4;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73381596 | 73381676 | 73381596 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| chr8.2 | exon | 73381791 | 73381889 | 73381791 | ID=MS.gene074465.t1.exon5;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73381791 | 73381889 | 73381791 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| chr8.2 | exon | 73383918 | 73384118 | 73383918 | ID=MS.gene074465.t1.exon6;Parent=MS.gene074465.t1 |
| chr8.2 | CDS | 73383918 | 73384118 | 73383918 | ID=cds.MS.gene074465.t1;Parent=MS.gene074465.t1 |
| Gene Sequence |
| Protein sequence |
