Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20577.t1 | XP_003607049.1 | 94.4 | 266 | 10 | 1 | 1 | 266 | 76 | 336 | 5.10E-131 | 477.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20577.t1 | G7JJU3 | 94.4 | 266 | 10 | 1 | 1 | 266 | 76 | 336 | 3.7e-131 | 477.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene20577 | 0.836099 | 1.14E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene20577 | 0.825297 | 5.06E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene20577 | 0.828504 | 8.67E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene20577 | 0.819668 | 1.03E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene20577 | 0.815046 | 1.13E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene20577 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene20577 | 0.80879 | 2.61E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene20577 | 0.804275 | 2.34E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene20577 | 0.823181 | 1.59E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene20577 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene20577 | 0.865956 | 4.05E-65 | -1.69E-46 |
| MS.gene05081 | MS.gene20577 | 0.843881 | 1.07E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene20577 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene20577 | 0.817541 | 3.13E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene20577 | 0.843152 | 1.67E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene20577 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene20577 | 0.856465 | 3.16E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene20577 | 0.807853 | 4.13E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene20577 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene20577 | 0.823582 | 1.28E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene20577 | 0.830852 | 2.32E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene20577 | 0.827624 | 1.41E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene20577 | 0.809416 | 1.91E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene20577 | 0.80758 | 4.71E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene20577 | 0.81 | 1.43E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene20577 | 0.830592 | 2.69E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene20577 | 0.806354 | 8.57E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene20577 | 0.829205 | 5.86E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene20577 | 0.809724 | 1.64E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene20577 | 0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene20577 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene20577 | 0.837825 | 4.13E-57 | -1.69E-46 |
| MS.gene055539 | MS.gene20577 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene20577 | 0.802172 | 6.36E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene20577 | 0.838243 | 3.23E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene20577 | 0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene20577 | 0.820773 | 5.75E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene20577 | 0.807471 | 4.97E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene20577 | 0.830351 | 3.08E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene20577 | 0.823063 | 1.69E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene20577 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene20577 | 0.812696 | 3.72E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene20577 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene20577 | 0.821792 | 3.34E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene20577 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene20577 | 0.823201 | 1.57E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene20577 | 0.856945 | 2.28E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene20577 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene20577 | 0.836981 | 6.80E-57 | -1.69E-46 |
| MS.gene06097 | MS.gene20577 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene20577 | 0.802743 | 4.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20577.t1 | MTR_6g008890 | 94.361 | 266 | 10 | 1 | 1 | 266 | 76 | 336 | 0.0 | 508 |
| MS.gene20577.t1 | MTR_4g071610 | 94.361 | 266 | 10 | 1 | 1 | 266 | 76 | 336 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20577.t1 | AT5G14970 | 54.135 | 266 | 109 | 5 | 1 | 266 | 83 | 335 | 4.85e-85 | 259 |
| MS.gene20577.t1 | AT2G14910 | 36.140 | 285 | 151 | 7 | 1 | 266 | 84 | 356 | 3.77e-43 | 151 |
| MS.gene20577.t1 | AT2G14910 | 35.789 | 285 | 152 | 7 | 1 | 266 | 84 | 356 | 2.96e-42 | 149 |
| MS.gene20577.t1 | AT1G63610 | 25.843 | 267 | 141 | 7 | 2 | 264 | 93 | 306 | 3.23e-12 | 66.2 |
Find 64 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCATCATTTCCTGCTTC+TGG | 0.140167 | 6.3:-4687516 | None:intergenic |
| TTCACCTCCAAACTCTTTAA+AGG | 0.208375 | 6.3:-4686089 | None:intergenic |
| GGAAGCTAGCTCTAACTTTA+TGG | 0.233045 | 6.3:+4688020 | MS.gene20577:CDS |
| GAGAAGGTTGTTTCTGATTT+GGG | 0.261359 | 6.3:+4686140 | MS.gene20577:CDS |
| TGAGAAGGTTGTTTCTGATT+TGG | 0.269725 | 6.3:+4686139 | MS.gene20577:CDS |
| TCGCTCTTTCGATCCTGATA+TGG | 0.292029 | 6.3:+4687582 | MS.gene20577:CDS |
| TGAAACGCCTTTAAAGAGTT+TGG | 0.302289 | 6.3:+4686082 | MS.gene20577:CDS |
| TTGTGAGGCATTACCATATC+AGG | 0.310461 | 6.3:-4687595 | None:intergenic |
| TTGCATCATTTCCTGCTTCT+GGG | 0.339715 | 6.3:-4687515 | None:intergenic |
| CTTGTTTCTTCTATCATCAC+TGG | 0.342003 | 6.3:+4683953 | MS.gene20577:CDS |
| TGATTTGGGGTTAGCGAATT+CGG | 0.348201 | 6.3:+4686154 | MS.gene20577:CDS |
| AGTAATGGCGCAGGAGTCTT+TGG | 0.369133 | 6.3:+4686191 | MS.gene20577:CDS |
| GATGTCCTTGACGAGGAATC+TGG | 0.386448 | 6.3:+4686028 | MS.gene20577:CDS |
| CTTTGGAGATTTGCCGCCTC+AGG | 0.387256 | 6.3:+4686208 | MS.gene20577:CDS |
| AGGAATTCGGAACAATTTGC+TGG | 0.420898 | 6.3:+4687552 | MS.gene20577:CDS |
| CAAACTATTTCTACTATGCT+TGG | 0.427819 | 6.3:+4683866 | MS.gene20577:CDS |
| AACTCATCACCATCATCGTC+CGG | 0.439465 | 6.3:-4688075 | None:intergenic |
| GAAATATCACATGCGGATCA+AGG | 0.445138 | 6.3:+4686050 | MS.gene20577:CDS |
| TAGAACACGACAGAGGAATT+CGG | 0.452227 | 6.3:+4687539 | MS.gene20577:CDS |
| AGAAACACCTTTAGAGATAA+CGG | 0.473945 | 6.3:-4683819 | None:intergenic |
| TTTAAAGAGTTTGGAGGTGA+AGG | 0.499329 | 6.3:+4686091 | MS.gene20577:CDS |
| GGAGTTGAATGCCCAGAAGC+AGG | 0.516158 | 6.3:+4687504 | MS.gene20577:intron |
| TCGGCCGTCATCAGAGGAAG+TGG | 0.517662 | 6.3:+4687945 | MS.gene20577:CDS |
| GATAACTCCGTTATCTCTAA+AGG | 0.520590 | 6.3:+4683812 | MS.gene20577:CDS |
| TTGAGATTCAACCTCTTCAT+CGG | 0.522451 | 6.3:+4683927 | MS.gene20577:CDS |
| CGCTATGGAATGCAGAGTAC+AGG | 0.526987 | 6.3:+4686006 | MS.gene20577:CDS |
| AAATATCACATGCGGATCAA+GGG | 0.543711 | 6.3:+4686051 | MS.gene20577:CDS |
| GAAACTTACAGCAGCAGTAA+TGG | 0.544279 | 6.3:+4686176 | MS.gene20577:CDS |
| GACTATCACCCGGACGATGA+TGG | 0.547884 | 6.3:+4688066 | MS.gene20577:CDS |
| AGAAGGTTGTTTCTGATTTG+GGG | 0.556586 | 6.3:+4686141 | MS.gene20577:CDS |
| AACGCCTTTAAAGAGTTTGG+AGG | 0.557457 | 6.3:+4686085 | MS.gene20577:CDS |
| TTGTTTCTTCTATCATCACT+GGG | 0.557906 | 6.3:+4683954 | MS.gene20577:CDS |
| AAAAGCAAAATCTGCTGTAA+GGG | 0.558130 | 6.3:-4688172 | None:intergenic |
| TCCTCCACTTCCTCTGATGA+CGG | 0.560560 | 6.3:-4687949 | None:intergenic |
| ACCAGAAAAGCAACTTTGCT+AGG | 0.561251 | 6.3:-4688128 | None:intergenic |
| AAGAGTTTGGAGGTGAAGGG+TGG | 0.561930 | 6.3:+4686095 | MS.gene20577:CDS |
| GAAACAAGTAACCGATGAAG+AGG | 0.564989 | 6.3:-4683938 | None:intergenic |
| TTAAAGAGTTTGGAGGTGAA+GGG | 0.573325 | 6.3:+4686092 | MS.gene20577:CDS |
| GTAACATCAAAATGATCAGA+AGG | 0.580361 | 6.3:-4683896 | None:intergenic |
| AAGGGTGGTGAAGAAGAACA+TGG | 0.582706 | 6.3:+4686110 | MS.gene20577:CDS |
| TACAGCAGCAGTAATGGCGC+AGG | 0.586366 | 6.3:+4686182 | MS.gene20577:CDS |
| GATAGGTGACTGAAATGTCT+CGG | 0.586884 | 6.3:+4687926 | MS.gene20577:intron |
| ACTCATCACCATCATCGTCC+GGG | 0.590352 | 6.3:-4688074 | None:intergenic |
| AGGGTGGTGAAGAAGAACAT+GGG | 0.599277 | 6.3:+4686111 | MS.gene20577:CDS |
| GTCTGAGTTGACAAACATGA+AGG | 0.606464 | 6.3:+4686256 | MS.gene20577:CDS |
| TGCTAGGTAATCGCGAGAAG+TGG | 0.609297 | 6.3:-4688112 | None:intergenic |
| AATGTCTCGGCCGTCATCAG+AGG | 0.610274 | 6.3:+4687939 | MS.gene20577:CDS |
| TAGAGCTAGCTTCCTCGACA+AGG | 0.624862 | 6.3:-4688011 | None:intergenic |
| AATATCACATGCGGATCAAG+GGG | 0.625812 | 6.3:+4686052 | MS.gene20577:CDS |
| GAGATAACGGAGTTATCGAG+AGG | 0.629687 | 6.3:-4683806 | None:intergenic |
| TTTGAGAAGATTCCTTGTCG+AGG | 0.634298 | 6.3:+4687999 | MS.gene20577:CDS |
| TTTATGGAACAATCAGTCGA+AGG | 0.638089 | 6.3:+4688036 | MS.gene20577:CDS |
| TATTTCCAGATTCCTCGTCA+AGG | 0.638754 | 6.3:-4686033 | None:intergenic |
| ATCACATGCGGATCAAGGGG+CGG | 0.640143 | 6.3:+4686055 | MS.gene20577:CDS |
| AGAACATGGGGAAACTGAGA+AGG | 0.640390 | 6.3:+4686124 | MS.gene20577:CDS |
| GGGTGGTGAAGAAGAACATG+GGG | 0.643013 | 6.3:+4686112 | MS.gene20577:CDS |
| GCCGTCATCAGAGGAAGTGG+AGG | 0.649197 | 6.3:+4687948 | MS.gene20577:CDS |
| TGAATGTATTTCAGAGCCTG+AGG | 0.668987 | 6.3:-4686224 | None:intergenic |
| GAATCTGGAAATATCACATG+CGG | 0.673688 | 6.3:+4686043 | MS.gene20577:CDS |
| ATGTATTTCAGAGCCTGAGG+CGG | 0.676018 | 6.3:-4686221 | None:intergenic |
| TGAGTTGACAAACATGAAGG+AGG | 0.679770 | 6.3:+4686259 | MS.gene20577:CDS |
| AGGAAACATAGACTATCACC+CGG | 0.704393 | 6.3:+4688056 | MS.gene20577:CDS |
| ATGCAATTAGAACACGACAG+AGG | 0.723714 | 6.3:+4687532 | MS.gene20577:CDS |
| AGTACAGGATGTCCTTGACG+AGG | 0.724418 | 6.3:+4686021 | MS.gene20577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATTATAGAAAATTG+AGG | - | chr6.3:4684000-4684019 | None:intergenic | 15.0% |
| !! | ATAAACTTAAAATTCAATCA+AGG | - | chr6.3:4686392-4686411 | None:intergenic | 15.0% |
| !! | TCACAAATTTACAAAATAAA+CGG | - | chr6.3:4686961-4686980 | None:intergenic | 15.0% |
| !! | TTATGAATTTAGCATTATAT+TGG | + | chr6.3:4684943-4684962 | MS.gene20577:intron | 15.0% |
| !!! | GAAATTGATAAATTTTGAAT+TGG | + | chr6.3:4685959-4685978 | MS.gene20577:intron | 15.0% |
| !!! | GTTGACAATATAAATTATTT+TGG | - | chr6.3:4684855-4684874 | None:intergenic | 15.0% |
| !!! | TGAATTTTAAGTTTATGTAT+CGG | + | chr6.3:4686396-4686415 | MS.gene20577:intron | 15.0% |
| !! | AAATTATAGAAAATTGAGGT+AGG | - | chr6.3:4683996-4684015 | None:intergenic | 20.0% |
| !! | AATACTTTGACAAACAAAAA+TGG | - | chr6.3:4684600-4684619 | None:intergenic | 20.0% |
| !! | GTGACAACTTAATATAAATA+GGG | - | chr6.3:4685752-4685771 | None:intergenic | 20.0% |
| !! | GTTATTATTGTGAGAAAAAA+AGG | + | chr6.3:4686788-4686807 | MS.gene20577:intron | 20.0% |
| !! | TATTTGATAAATCTCAAAGT+TGG | + | chr6.3:4685455-4685474 | MS.gene20577:intron | 20.0% |
| !! | TCATTCTGTCAAATTATTAT+CGG | + | chr6.3:4684395-4684414 | MS.gene20577:intron | 20.0% |
| !!! | AACTGAATTTTACAAAATCA+GGG | + | chr6.3:4685518-4685537 | MS.gene20577:intron | 20.0% |
| !!! | AATAATAACCTTCAAGTTAT+CGG | - | chr6.3:4686777-4686796 | None:intergenic | 20.0% |
| !!! | AATTTTTTATTATTCCAAGG+AGG | + | chr6.3:4686364-4686383 | MS.gene20577:intron | 20.0% |
| !!! | GAATAATTTGTTTGAAAGAA+TGG | - | chr6.3:4686896-4686915 | None:intergenic | 20.0% |
| !!! | GAATTTTAAGTTTATGTATC+GGG | + | chr6.3:4686397-4686416 | MS.gene20577:intron | 20.0% |
| !!! | TCATTTTGTCGAATTATTAT+CGG | + | chr6.3:4684183-4684202 | MS.gene20577:intron | 20.0% |
| !!! | TGCAATTTTTTATTATTCCA+AGG | + | chr6.3:4686361-4686380 | MS.gene20577:intron | 20.0% |
| !!! | TTATTCTTTGTTGTTTGTAT+TGG | + | chr6.3:4686910-4686929 | MS.gene20577:intron | 20.0% |
| !!! | TTTGTTTGTCAAAGTATTAT+TGG | + | chr6.3:4684602-4684621 | MS.gene20577:intron | 20.0% |
| ! | AAGATATTATCGCCAAATTA+AGG | + | chr6.3:4685331-4685350 | MS.gene20577:intron | 25.0% |
| ! | AATTTAGCACTCAAAACATT+AGG | + | chr6.3:4685270-4685289 | MS.gene20577:intron | 25.0% |
| ! | AATTTGAGAGTGACAATAAT+TGG | + | chr6.3:4684779-4684798 | MS.gene20577:intron | 25.0% |
| ! | ATAAAAAGTTTCACAACCAT+AGG | - | chr6.3:4686432-4686451 | None:intergenic | 25.0% |
| ! | ATTCATAGAATGGTGAAAAT+AGG | - | chr6.3:4687392-4687411 | None:intergenic | 25.0% |
| ! | ATTGACATATAACTAGTAAG+AGG | - | chr6.3:4687080-4687099 | None:intergenic | 25.0% |
| ! | ATTTAGCACTCAAAACATTA+GGG | + | chr6.3:4685271-4685290 | MS.gene20577:intron | 25.0% |
| ! | CAACTTAATATAAATAGGGA+CGG | - | chr6.3:4685748-4685767 | None:intergenic | 25.0% |
| ! | GGTGACAACTTAATATAAAT+AGG | - | chr6.3:4685753-4685772 | None:intergenic | 25.0% |
| ! | TAAACTCAAATTACTATCAG+TGG | - | chr6.3:4686465-4686484 | None:intergenic | 25.0% |
| ! | TTACTCATAGACTGTTTAAA+AGG | + | chr6.3:4687433-4687452 | MS.gene20577:intron | 25.0% |
| ! | TTATCAATTATGTGTGTGTT+TGG | + | chr6.3:4684273-4684292 | MS.gene20577:intron | 25.0% |
| ! | TTGTACTAAAAAACGTATAG+TGG | - | chr6.3:4687716-4687735 | None:intergenic | 25.0% |
| !! | ACTGAATTTTACAAAATCAG+GGG | + | chr6.3:4685519-4685538 | MS.gene20577:intron | 25.0% |
| !! | ATGGTTGTGAAACTTTTTAT+CGG | + | chr6.3:4686432-4686451 | MS.gene20577:intron | 25.0% |
| !! | CAAAATATGAAGTTGGTTAT+CGG | + | chr6.3:4685370-4685389 | MS.gene20577:intron | 25.0% |
| !! | GAACTGAATTTTACAAAATC+AGG | + | chr6.3:4685517-4685536 | MS.gene20577:intron | 25.0% |
| !! | TGACTTTTTACTTTATGACA+TGG | - | chr6.3:4686544-4686563 | None:intergenic | 25.0% |
| !!! | AGTTTTAGAGGATTAATGTA+AGG | + | chr6.3:4685866-4685885 | MS.gene20577:intron | 25.0% |
| !!! | GACAATGTTTATTTTCTTTC+AGG | + | chr6.3:4687483-4687502 | MS.gene20577:intron | 25.0% |
| !!! | GCAATATTTTGAAGTTTTAG+AGG | + | chr6.3:4685854-4685873 | MS.gene20577:intron | 25.0% |
| !!! | GCTCTATTTTTGTTACTAAT+TGG | + | chr6.3:4685898-4685917 | MS.gene20577:intron | 25.0% |
| !!! | GTTTTAGAGGATTAATGTAA+GGG | + | chr6.3:4685867-4685886 | MS.gene20577:intron | 25.0% |
| !!! | TAGCTTATTTCTATTTGCAA+AGG | + | chr6.3:4687861-4687880 | MS.gene20577:intron | 25.0% |
| !!! | TCAAAATGTTTTGAACAAGT+TGG | - | chr6.3:4687984-4688003 | None:intergenic | 25.0% |
| !!! | TTTTGTTACTAATTGGTTTC+TGG | + | chr6.3:4685905-4685924 | MS.gene20577:intron | 25.0% |
| AAAAAGCAAAATCTGCTGTA+AGG | - | chr6.3:4688176-4688195 | None:intergenic | 30.0% | |
| AAAAGCAAAATCTGCTGTAA+GGG | - | chr6.3:4688175-4688194 | None:intergenic | 30.0% | |
| AGGTATCCAAAATATGAAGT+TGG | + | chr6.3:4685363-4685382 | MS.gene20577:intron | 30.0% | |
| ATAATATCCTAAACACGCTT+AGG | + | chr6.3:4687118-4687137 | MS.gene20577:intron | 30.0% | |
| CAGACACATTTCTATCAAAA+GGG | - | chr6.3:4684125-4684144 | None:intergenic | 30.0% | |
| CTATTAATTACGTGTGTGTT+TGG | + | chr6.3:4684483-4684502 | MS.gene20577:intron | 30.0% | |
| GGATTGTGTAAATTTGACTA+TGG | + | chr6.3:4684687-4684706 | MS.gene20577:intron | 30.0% | |
| GTAACATCAAAATGATCAGA+AGG | - | chr6.3:4683899-4683918 | None:intergenic | 30.0% | |
| TAATATCCTAAACACGCTTA+GGG | + | chr6.3:4687119-4687138 | MS.gene20577:intron | 30.0% | |
| TAATCATTAGTGTCAGTGTT+GGG | - | chr6.3:4684151-4684170 | None:intergenic | 30.0% | |
| TTATATTGGTGTGATTCAAG+TGG | + | chr6.3:4684957-4684976 | MS.gene20577:intron | 30.0% | |
| TTCAACTTTGTTAATCACAC+TGG | + | chr6.3:4687896-4687915 | MS.gene20577:intron | 30.0% | |
| TTGTAAAATTCAGTTCCAAC+CGG | - | chr6.3:4685513-4685532 | None:intergenic | 30.0% | |
| TTGTAAATTTGTGAAAAGCG+AGG | + | chr6.3:4686967-4686986 | MS.gene20577:intron | 30.0% | |
| ! | AACCAAGTATTGTCAAATAG+CGG | + | chr6.3:4687643-4687662 | MS.gene20577:intron | 30.0% |
| ! | AGAAACACCTTTAGAGATAA+CGG | - | chr6.3:4683822-4683841 | None:intergenic | 30.0% |
| ! | CGATAACCAACTTCATATTT+TGG | - | chr6.3:4685372-4685391 | None:intergenic | 30.0% |
| ! | CTCTCAATTTAGAACCAAAT+TGG | + | chr6.3:4685104-4685123 | MS.gene20577:intron | 30.0% |
| ! | CTTTTGATGCATTCATAGAA+TGG | - | chr6.3:4687402-4687421 | None:intergenic | 30.0% |
| ! | TAAACATGTGCACAAGTTTT+TGG | + | chr6.3:4687223-4687242 | MS.gene20577:intron | 30.0% |
| ! | TTACGTTTAGCATTTGAGTT+TGG | + | chr6.3:4685220-4685239 | MS.gene20577:intron | 30.0% |
| ! | TTGTCAAAGTATTATTGGTG+TGG | + | chr6.3:4684607-4684626 | MS.gene20577:intron | 30.0% |
| ! | TTGTTTCTTCTATCATCACT+GGG | + | chr6.3:4683954-4683973 | MS.gene20577:CDS | 30.0% |
| !! | CAAACTATTTCTACTATGCT+TGG | + | chr6.3:4683866-4683885 | MS.gene20577:CDS | 30.0% |
| !! | GGATGTTTTTAATTGTGCTT+TGG | + | chr6.3:4685024-4685043 | MS.gene20577:intron | 30.0% |
| !! | TTTGTGCTTTTGAAAGATTG+AGG | + | chr6.3:4685818-4685837 | MS.gene20577:intron | 30.0% |
| !!! | TGTAGTGATTAGTTTTGTAG+TGG | + | chr6.3:4685052-4685071 | MS.gene20577:intron | 30.0% |
| !!! | TGTTGTTTTTAATTGTGCTC+TGG | + | chr6.3:4685184-4685203 | MS.gene20577:intron | 30.0% |
| AAAATAGGATCAATTCTGGC+CGG | - | chr6.3:4687377-4687396 | None:intergenic | 35.0% | |
| AAAGGACACTTTCTGATAGA+AGG | + | chr6.3:4684309-4684328 | MS.gene20577:intron | 35.0% | |
| AAATATCACATGCGGATCAA+GGG | + | chr6.3:4686051-4686070 | MS.gene20577:CDS | 35.0% | |
| AACTAGAGTCGTATGTGATT+AGG | + | chr6.3:4685142-4685161 | MS.gene20577:intron | 35.0% | |
| AATGGTTGATTAAGGAAGCT+AGG | + | chr6.3:4685399-4685418 | MS.gene20577:intron | 35.0% | |
| AGAATTATTGACAATCGCTG+TGG | - | chr6.3:4686621-4686640 | None:intergenic | 35.0% | |
| AGATTCATAGATTGAGTGGA+TGG | + | chr6.3:4684666-4684685 | MS.gene20577:intron | 35.0% | |
| AGTACACCTATAAAAGCCTA+AGG | + | chr6.3:4687159-4687178 | MS.gene20577:intron | 35.0% | |
| ATGAACAACCGATAACTTGA+AGG | + | chr6.3:4686766-4686785 | MS.gene20577:intron | 35.0% | |
| ATTGTAATCAATCCTGTGTG+TGG | + | chr6.3:4684056-4684075 | MS.gene20577:intron | 35.0% | |
| CCAGACACATTTCTATCAAA+AGG | - | chr6.3:4684126-4684145 | None:intergenic | 35.0% | |
| CTACAGAACTATGTTTCGAT+CGG | + | chr6.3:4686495-4686514 | MS.gene20577:intron | 35.0% | |
| GAATCTGGAAATATCACATG+CGG | + | chr6.3:4686043-4686062 | MS.gene20577:CDS | 35.0% | |
| GAGTGACAATAATTGGATGA+TGG | + | chr6.3:4684786-4684805 | MS.gene20577:intron | 35.0% | |
| GATAACTCCGTTATCTCTAA+AGG | + | chr6.3:4683812-4683831 | MS.gene20577:CDS | 35.0% | |
| GCTTATGACAACAAGCTATA+TGG | - | chr6.3:4687315-4687334 | None:intergenic | 35.0% | |
| GGTGAAAATAGGATCAATTC+TGG | - | chr6.3:4687381-4687400 | None:intergenic | 35.0% | |
| GTAATCATTAGTGTCAGTGT+TGG | - | chr6.3:4684152-4684171 | None:intergenic | 35.0% | |
| GTGATTAGAGTTGGAACATT+GGG | + | chr6.3:4684997-4685016 | MS.gene20577:intron | 35.0% | |
| GTTCCAACTCTAATCACATA+GGG | - | chr6.3:4684994-4685013 | None:intergenic | 35.0% | |
| TACTTAGCCAACAAAACTTC+AGG | + | chr6.3:4684810-4684829 | MS.gene20577:intron | 35.0% | |
| TCAGAGATTCATAGATTGAG+TGG | + | chr6.3:4684662-4684681 | MS.gene20577:intron | 35.0% | |
| TGTGATTAGAGTTGGAACAT+TGG | + | chr6.3:4684996-4685015 | MS.gene20577:intron | 35.0% | |
| TGTTCCAACTCTAATCACAT+AGG | - | chr6.3:4684995-4685014 | None:intergenic | 35.0% | |
| TTAAAGAGTTTGGAGGTGAA+GGG | + | chr6.3:4686092-4686111 | MS.gene20577:CDS | 35.0% | |
| TTACCCTATGTGATTAGAGT+TGG | + | chr6.3:4684988-4685007 | MS.gene20577:intron | 35.0% | |
| TTAGAGGATTAATGTAAGGG+TGG | + | chr6.3:4685870-4685889 | MS.gene20577:intron | 35.0% | |
| TTCACCTCCAAACTCTTTAA+AGG | - | chr6.3:4686092-4686111 | None:intergenic | 35.0% | |
| TTGAGATTCAACCTCTTCAT+CGG | + | chr6.3:4683927-4683946 | MS.gene20577:CDS | 35.0% | |
| TTTAAAGAGTTTGGAGGTGA+AGG | + | chr6.3:4686091-4686110 | MS.gene20577:CDS | 35.0% | |
| TTTATGGAACAATCAGTCGA+AGG | + | chr6.3:4688036-4688055 | MS.gene20577:CDS | 35.0% | |
| ! | AACAGAAGTTGTGATTTGTG+AGG | - | chr6.3:4687613-4687632 | None:intergenic | 35.0% |
| ! | AATCAAGTTGCAATTGAGAG+TGG | + | chr6.3:4687826-4687845 | MS.gene20577:intron | 35.0% |
| ! | CCAAATTAAGGTGCTCTTTA+AGG | + | chr6.3:4685343-4685362 | MS.gene20577:intron | 35.0% |
| ! | CCTTTTGATAGAAATGTGTC+TGG | + | chr6.3:4684123-4684142 | MS.gene20577:intron | 35.0% |
| ! | CTTGTTTCTTCTATCATCAC+TGG | + | chr6.3:4683953-4683972 | MS.gene20577:CDS | 35.0% |
| ! | TGAAACGCCTTTAAAGAGTT+TGG | + | chr6.3:4686082-4686101 | MS.gene20577:CDS | 35.0% |
| ! | TGTGCAAAGGTGATGTTTTT+GGG | + | chr6.3:4685933-4685952 | MS.gene20577:intron | 35.0% |
| ! | TTGTGCAAAGGTGATGTTTT+TGG | + | chr6.3:4685932-4685951 | MS.gene20577:intron | 35.0% |
| ! | TTTCGTCTCATTCTCTTTTC+CGG | + | chr6.3:4687355-4687374 | MS.gene20577:intron | 35.0% |
| ! | TTTTGGTCAACACATCACTA+AGG | - | chr6.3:4684838-4684857 | None:intergenic | 35.0% |
| !! | AGAAGGTTGTTTCTGATTTG+GGG | + | chr6.3:4686141-4686160 | MS.gene20577:CDS | 35.0% |
| !! | AGTAAGTTCTGAAATTGGAG+AGG | + | chr6.3:4685543-4685562 | MS.gene20577:intron | 35.0% |
| !! | AGTTCGTGTTTTTGTTGCTA+TGG | + | chr6.3:4686308-4686327 | MS.gene20577:intron | 35.0% |
| !! | CCTTAAAGAGCACCTTAATT+TGG | - | chr6.3:4685346-4685365 | None:intergenic | 35.0% |
| !! | GAGAAGGTTGTTTCTGATTT+GGG | + | chr6.3:4686140-4686159 | MS.gene20577:CDS | 35.0% |
| !! | GTAAGTTCTGAAATTGGAGA+GGG | + | chr6.3:4685544-4685563 | MS.gene20577:intron | 35.0% |
| !! | TAAGGTACCTGAAGTTTTGT+TGG | - | chr6.3:4684820-4684839 | None:intergenic | 35.0% |
| !! | TCTATCAGAAAGTGTCCTTT+CGG | - | chr6.3:4684309-4684328 | None:intergenic | 35.0% |
| !! | TGAGAAGGTTGTTTCTGATT+TGG | + | chr6.3:4686139-4686158 | MS.gene20577:CDS | 35.0% |
| !!! | ATTAGTTTTGTAGTGGAGTG+TGG | + | chr6.3:4685059-4685078 | MS.gene20577:intron | 35.0% |
| !!! | GTTTCTGGTTTTTTGTGCAA+AGG | + | chr6.3:4685920-4685939 | MS.gene20577:intron | 35.0% |
| !!! | TTAGTTTTGTAGTGGAGTGT+GGG | + | chr6.3:4685060-4685079 | MS.gene20577:intron | 35.0% |
| AATATCACATGCGGATCAAG+GGG | + | chr6.3:4686052-4686071 | MS.gene20577:CDS | 40.0% | |
| ACACCTATAAAAGCCTAAGG+AGG | + | chr6.3:4687162-4687181 | MS.gene20577:intron | 40.0% | |
| ACCACCAAAAAATGCTGTAC+TGG | - | chr6.3:4685710-4685729 | None:intergenic | 40.0% | |
| ACCAGAAAAGCAACTTTGCT+AGG | - | chr6.3:4688131-4688150 | None:intergenic | 40.0% | |
| ACCTATAAAAGCCTAAGGAG+GGG | + | chr6.3:4687164-4687183 | MS.gene20577:intron | 40.0% | |
| AGCATAGAGATGGAAAGAGA+TGG | - | chr6.3:4686833-4686852 | None:intergenic | 40.0% | |
| AGGAAACATAGACTATCACC+CGG | + | chr6.3:4688056-4688075 | MS.gene20577:CDS | 40.0% | |
| AGGAATTCGGAACAATTTGC+TGG | + | chr6.3:4687552-4687571 | MS.gene20577:CDS | 40.0% | |
| ATAATCGTAGAACCACACAC+AGG | - | chr6.3:4684071-4684090 | None:intergenic | 40.0% | |
| ATCACACTGGATGTCTTGAT+AGG | + | chr6.3:4687909-4687928 | MS.gene20577:intron | 40.0% | |
| ATGCAATTAGAACACGACAG+AGG | + | chr6.3:4687532-4687551 | MS.gene20577:CDS | 40.0% | |
| ATTGCATCATTTCCTGCTTC+TGG | - | chr6.3:4687519-4687538 | None:intergenic | 40.0% | |
| CAAACCAGCGTAGTCAATAT+CGG | - | chr6.3:4686664-4686683 | None:intergenic | 40.0% | |
| CACCTATAAAAGCCTAAGGA+GGG | + | chr6.3:4687163-4687182 | MS.gene20577:intron | 40.0% | |
| CGCTTTATGGCGTCTTAAAA+CGG | - | chr6.3:4686568-4686587 | None:intergenic | 40.0% | |
| GAAACAAGTAACCGATGAAG+AGG | - | chr6.3:4683941-4683960 | None:intergenic | 40.0% | |
| GAAACTTACAGCAGCAGTAA+TGG | + | chr6.3:4686176-4686195 | MS.gene20577:CDS | 40.0% | |
| GAAATATCACATGCGGATCA+AGG | + | chr6.3:4686050-4686069 | MS.gene20577:CDS | 40.0% | |
| GAACCAAATTGGTGTAGTTC+AGG | + | chr6.3:4685115-4685134 | MS.gene20577:intron | 40.0% | |
| GATAGGTGACTGAAATGTCT+CGG | + | chr6.3:4687926-4687945 | MS.gene20577:intron | 40.0% | |
| GGTGCACAAATGGTTGATTA+AGG | + | chr6.3:4685391-4685410 | MS.gene20577:intron | 40.0% | |
| GTCTCAGATGACAACACAAT+AGG | - | chr6.3:4684335-4684354 | None:intergenic | 40.0% | |
| TAGAACACGACAGAGGAATT+CGG | + | chr6.3:4687539-4687558 | MS.gene20577:CDS | 40.0% | |
| TAGAGTCGTATGTGATTAGG+AGG | + | chr6.3:4685145-4685164 | MS.gene20577:intron | 40.0% | |
| TATTTCCAGATTCCTCGTCA+AGG | - | chr6.3:4686036-4686055 | None:intergenic | 40.0% | |
| TCAATATCGGCCATAACAGA+TGG | - | chr6.3:4686651-4686670 | None:intergenic | 40.0% | |
| TGAATCTCTGACACAAACAC+CGG | - | chr6.3:4684653-4684672 | None:intergenic | 40.0% | |
| TGAATGTATTTCAGAGCCTG+AGG | - | chr6.3:4686227-4686246 | None:intergenic | 40.0% | |
| TGATTAGGAGGTCGAACATT+TGG | + | chr6.3:4685157-4685176 | MS.gene20577:intron | 40.0% | |
| TTGAAGGAGTTAGGTGGAAA+AGG | + | chr6.3:4686686-4686705 | MS.gene20577:intron | 40.0% | |
| TTGCATCATTTCCTGCTTCT+GGG | - | chr6.3:4687518-4687537 | None:intergenic | 40.0% | |
| TTTGAGAAGATTCCTTGTCG+AGG | + | chr6.3:4687999-4688018 | MS.gene20577:CDS | 40.0% | |
| ! | AACGCCTTTAAAGAGTTTGG+AGG | + | chr6.3:4686085-4686104 | MS.gene20577:CDS | 40.0% |
| ! | GTCTGAGTTGACAAACATGA+AGG | + | chr6.3:4686256-4686275 | MS.gene20577:CDS | 40.0% |
| ! | TGAGTTGACAAACATGAAGG+AGG | + | chr6.3:4686259-4686278 | MS.gene20577:CDS | 40.0% |
| ! | TGATTTGGGGTTAGCGAATT+CGG | + | chr6.3:4686154-4686173 | MS.gene20577:CDS | 40.0% |
| ! | TTGTGAGGCATTACCATATC+AGG | - | chr6.3:4687598-4687617 | None:intergenic | 40.0% |
| ! | TTTTCGTTAGGTACACGCTA+TGG | + | chr6.3:4685991-4686010 | MS.gene20577:intron | 40.0% |
| !! | GATATTGACTACGCTGGTTT+GGG | + | chr6.3:4686663-4686682 | MS.gene20577:intron | 40.0% |
| !! | GGAAGCTAGCTCTAACTTTA+TGG | + | chr6.3:4688020-4688039 | MS.gene20577:CDS | 40.0% |
| !! | GGGGAAGTAAGTTCTGAAAT+TGG | + | chr6.3:4685538-4685557 | MS.gene20577:intron | 40.0% |
| !! | TGTGTTTGGTTCTGTAGTAC+TGG | + | chr6.3:4684287-4684306 | MS.gene20577:intron | 40.0% |
| !! | TTTGGTTCTGTAGTACCGAA+AGG | + | chr6.3:4684291-4684310 | MS.gene20577:intron | 40.0% |
| !! | TTTGGTTCTGTAGTACTGGA+AGG | + | chr6.3:4684501-4684520 | MS.gene20577:intron | 40.0% |
| !!! | ACCAGTACAGCATTTTTTGG+TGG | + | chr6.3:4685706-4685725 | MS.gene20577:intron | 40.0% |
| !!! | ACCTAGCAAAGTTGCTTTTC+TGG | + | chr6.3:4688127-4688146 | MS.gene20577:CDS | 40.0% |
| !!! | GTGCTATTTTTCTCGATACG+CGG | + | chr6.3:4687790-4687809 | MS.gene20577:intron | 40.0% |
| !!! | TAGTTTTGTAGTGGAGTGTG+GGG | + | chr6.3:4685061-4685080 | MS.gene20577:intron | 40.0% |
| !!! | TGCACCAGTACAGCATTTTT+TGG | + | chr6.3:4685703-4685722 | MS.gene20577:intron | 40.0% |
| !!! | TGGTTGTTGCTGTTTTCGTT+AGG | + | chr6.3:4685979-4685998 | MS.gene20577:intron | 40.0% |
| AACTCATCACCATCATCGTC+CGG | - | chr6.3:4688078-4688097 | None:intergenic | 45.0% | |
| AAGGGTGGTGAAGAAGAACA+TGG | + | chr6.3:4686110-4686129 | MS.gene20577:CDS | 45.0% | |
| AGAACATGGGGAAACTGAGA+AGG | + | chr6.3:4686124-4686143 | MS.gene20577:CDS | 45.0% | |
| AGGGTGGTGAAGAAGAACAT+GGG | + | chr6.3:4686111-4686130 | MS.gene20577:CDS | 45.0% | |
| ATGTATTTCAGAGCCTGAGG+CGG | - | chr6.3:4686224-4686243 | None:intergenic | 45.0% | |
| CAACTACCCTAAGCGTGTTT+AGG | - | chr6.3:4687128-4687147 | None:intergenic | 45.0% | |
| CCAAATTGGTGTAGTTCAGG+TGG | + | chr6.3:4685118-4685137 | MS.gene20577:intron | 45.0% | |
| CCACCTGAACTACACCAATT+TGG | - | chr6.3:4685121-4685140 | None:intergenic | 45.0% | |
| CGCCGCTATTTGACAATACT+TGG | - | chr6.3:4687648-4687667 | None:intergenic | 45.0% | |
| CGTGTTAGTAGTGTTGTGTC+CGG | + | chr6.3:4684631-4684650 | MS.gene20577:intron | 45.0% | |
| GAGGTCAATCAACCTGTTGA+CGG | + | chr6.3:4685677-4685696 | MS.gene20577:intron | 45.0% | |
| GGAAGGACACTTCTGATAGA+AGG | + | chr6.3:4684518-4684537 | MS.gene20577:intron | 45.0% | |
| GGGTTGTGCAAAACATCCTA+CGG | + | chr6.3:4685617-4685636 | MS.gene20577:intron | 45.0% | |
| GTGGGATGGAAAGAGATAGA+GGG | + | chr6.3:4685596-4685615 | MS.gene20577:intron | 45.0% | |
| GTTGGTTATCGGTGCACAAA+TGG | + | chr6.3:4685381-4685400 | MS.gene20577:intron | 45.0% | |
| TATCGGGTGAATTGCTCCTA+TGG | + | chr6.3:4686413-4686432 | MS.gene20577:intron | 45.0% | |
| TCGCTCTTTCGATCCTGATA+TGG | + | chr6.3:4687582-4687601 | MS.gene20577:CDS | 45.0% | |
| TCTTCCACTGCCATCTGTTA+TGG | + | chr6.3:4686638-4686657 | MS.gene20577:intron | 45.0% | |
| TGGGATGGAAAGAGATAGAG+GGG | + | chr6.3:4685597-4685616 | MS.gene20577:intron | 45.0% | |
| TGTGGGATGGAAAGAGATAG+AGG | + | chr6.3:4685595-4685614 | MS.gene20577:intron | 45.0% | |
| TTAGGGTAGTTGTGCATGTG+TGG | + | chr6.3:4687136-4687155 | MS.gene20577:intron | 45.0% | |
| ! | ATTCAATCAAGGCACCTCCT+TGG | - | chr6.3:4686381-4686400 | None:intergenic | 45.0% |
| ! | CGATATTGACTACGCTGGTT+TGG | + | chr6.3:4686662-4686681 | MS.gene20577:intron | 45.0% |
| ! | CTACGGTGACAAAAGTGCAA+CGG | + | chr6.3:4685634-4685653 | MS.gene20577:intron | 45.0% |
| !! | AGTTTTGTAGTGGAGTGTGG+GGG | + | chr6.3:4685062-4685081 | MS.gene20577:intron | 45.0% |
| !! | GAGATAACGGAGTTATCGAG+AGG | - | chr6.3:4683809-4683828 | None:intergenic | 45.0% |
| !! | TCGATCGGTGTTTTCGATTG+TGG | + | chr6.3:4686510-4686529 | MS.gene20577:intron | 45.0% |
| !! | TGGTTTGGGTTGAAGGAGTT+AGG | + | chr6.3:4686677-4686696 | MS.gene20577:intron | 45.0% |
| !! | TTTGGGTTGAAGGAGTTAGG+TGG | + | chr6.3:4686680-4686699 | MS.gene20577:intron | 45.0% |
| AAGAGTTTGGAGGTGAAGGG+TGG | + | chr6.3:4686095-4686114 | MS.gene20577:CDS | 50.0% | |
| ACTCATCACCATCATCGTCC+GGG | - | chr6.3:4688077-4688096 | None:intergenic | 50.0% | |
| AGAGTTGGAACATTGGGCAG+AGG | + | chr6.3:4685003-4685022 | MS.gene20577:intron | 50.0% | |
| AGTAATGGCGCAGGAGTCTT+TGG | + | chr6.3:4686191-4686210 | MS.gene20577:CDS | 50.0% | |
| AGTACAGGATGTCCTTGACG+AGG | + | chr6.3:4686021-4686040 | MS.gene20577:CDS | 50.0% | |
| CAATAGTGCGGCAATGGTGT+GGG | + | chr6.3:4685578-4685597 | MS.gene20577:intron | 50.0% | |
| CGCTATGGAATGCAGAGTAC+AGG | + | chr6.3:4686006-4686025 | MS.gene20577:CDS | 50.0% | |
| CTGAAATTGGAGAGGGATGC+AGG | + | chr6.3:4685551-4685570 | MS.gene20577:intron | 50.0% | |
| GATGTCCTTGACGAGGAATC+TGG | + | chr6.3:4686028-4686047 | MS.gene20577:CDS | 50.0% | |
| GCCTACTTGTGAAGGATGGT+GGG | - | chr6.3:4686599-4686618 | None:intergenic | 50.0% | |
| GGGTGGTGAAGAAGAACATG+GGG | + | chr6.3:4686112-4686131 | MS.gene20577:CDS | 50.0% | |
| GTTGCAGCACTATGGCTTAG+TGG | + | chr6.3:4687667-4687686 | MS.gene20577:intron | 50.0% | |
| TCCTCCACTTCCTCTGATGA+CGG | - | chr6.3:4687952-4687971 | None:intergenic | 50.0% | |
| TGACACCAAGCGCATGCATT+TGG | - | chr6.3:4685774-4685793 | None:intergenic | 50.0% | |
| TGCTAGGTAATCGCGAGAAG+TGG | - | chr6.3:4688115-4688134 | None:intergenic | 50.0% | |
| TGTCACCAAATGCATGCGCT+TGG | + | chr6.3:4685766-4685785 | MS.gene20577:intron | 50.0% | |
| TGTGGCCTACTTGTGAAGGA+TGG | - | chr6.3:4686603-4686622 | None:intergenic | 50.0% | |
| ! | AAAGTGCAACGGTGCTGGAA+TGG | + | chr6.3:4685645-4685664 | MS.gene20577:intron | 50.0% |
| ! | AGTGGGGACTGGTAGGAAAA+TGG | + | chr6.3:4685429-4685448 | MS.gene20577:intron | 50.0% |
| ! | ATGGCCGATATTGACTACGC+TGG | + | chr6.3:4686657-4686676 | MS.gene20577:intron | 50.0% |
| ! | ATTTTCCTACCAGTCCCCAC+TGG | - | chr6.3:4685430-4685449 | None:intergenic | 50.0% |
| ! | CACTGCGAAGAGCATAGAGA+TGG | - | chr6.3:4686843-4686862 | None:intergenic | 50.0% |
| ! | CGTTGCACTTTTGTCACCGT+AGG | - | chr6.3:4685636-4685655 | None:intergenic | 50.0% |
| ! | GCCCCTCCTTAGGCTTTTAT+AGG | - | chr6.3:4687168-4687187 | None:intergenic | 50.0% |
| ! | GTGGGGACTGGTAGGAAAAT+GGG | + | chr6.3:4685430-4685449 | MS.gene20577:intron | 50.0% |
| ! | TAAGACGCCATAAAGCGCCA+TGG | + | chr6.3:4686571-4686590 | MS.gene20577:intron | 50.0% |
| ! | TAGAGCTAGCTTCCTCGACA+AGG | - | chr6.3:4688014-4688033 | None:intergenic | 50.0% |
| ! | TGACAAAAGTGCAACGGTGC+TGG | + | chr6.3:4685640-4685659 | MS.gene20577:intron | 50.0% |
| ! | TTTTCCTACCAGTCCCCACT+GGG | - | chr6.3:4685429-4685448 | None:intergenic | 50.0% |
| !! | ACTACGCTGGTTTGGGTTGA+AGG | + | chr6.3:4686670-4686689 | MS.gene20577:intron | 50.0% |
| AATGTCTCGGCCGTCATCAG+AGG | + | chr6.3:4687939-4687958 | MS.gene20577:CDS | 55.0% | |
| ACTGGTGCACTACCGTCAAC+AGG | - | chr6.3:4685692-4685711 | None:intergenic | 55.0% | |
| AGTGGAGTGTGGGGGATACT+TGG | + | chr6.3:4685070-4685089 | MS.gene20577:intron | 55.0% | |
| ATAGCGGCGTTGCAGCACTA+TGG | + | chr6.3:4687659-4687678 | MS.gene20577:intron | 55.0% | |
| ATCACATGCGGATCAAGGGG+CGG | + | chr6.3:4686055-4686074 | MS.gene20577:CDS | 55.0% | |
| GACTATCACCCGGACGATGA+TGG | + | chr6.3:4688066-4688085 | MS.gene20577:CDS | 55.0% | |
| GCAATAGTGCGGCAATGGTG+TGG | + | chr6.3:4685577-4685596 | MS.gene20577:intron | 55.0% | |
| GCCCACCATCCTTCACAAGT+AGG | + | chr6.3:4686595-4686614 | MS.gene20577:intron | 55.0% | |
| GGAGTTGAATGCCCAGAAGC+AGG | + | chr6.3:4687504-4687523 | MS.gene20577:intron | 55.0% | |
| GGCCTACTTGTGAAGGATGG+TGG | - | chr6.3:4686600-4686619 | None:intergenic | 55.0% | |
| GGCTCAGACACGCACAAACA+CGG | - | chr6.3:4687059-4687078 | None:intergenic | 55.0% | |
| TACAGCAGCAGTAATGGCGC+AGG | + | chr6.3:4686182-4686201 | MS.gene20577:CDS | 55.0% | |
| TCGCTGTGGCCTACTTGTGA+AGG | - | chr6.3:4686607-4686626 | None:intergenic | 55.0% | |
| TCGGCCATAACAGATGGCAG+TGG | - | chr6.3:4686645-4686664 | None:intergenic | 55.0% | |
| TTTCCTACCAGTCCCCACTG+GGG | - | chr6.3:4685428-4685447 | None:intergenic | 55.0% | |
| ! | CTTTGGAGATTTGCCGCCTC+AGG | + | chr6.3:4686208-4686227 | MS.gene20577:CDS | 55.0% |
| ! | GATGCAGGAGCGCAATAGTG+CGG | + | chr6.3:4685566-4685585 | MS.gene20577:intron | 55.0% |
| !! | AAAGCCTAAGGAGGGGCGTT+TGG | + | chr6.3:4687171-4687190 | MS.gene20577:intron | 55.0% |
| AGGAAGCTAGGCTACCCCAG+TGG | + | chr6.3:4685411-4685430 | MS.gene20577:intron | 60.0% | |
| AGTGCGGCAATGGTGTGGGA+TGG | + | chr6.3:4685582-4685601 | MS.gene20577:intron | 60.0% | |
| AGTTCCAACCGGCCAAGCCT+CGG | - | chr6.3:4685502-4685521 | None:intergenic | 60.0% | |
| CCTCGGCCAACATCACACTC+GGG | - | chr6.3:4685485-4685504 | None:intergenic | 60.0% | |
| CTCGGCCAACATCACACTCG+GGG | - | chr6.3:4685484-4685503 | None:intergenic | 60.0% | |
| GAAGCTAGGCTACCCCAGTG+GGG | + | chr6.3:4685413-4685432 | MS.gene20577:intron | 60.0% | |
| GCCGTCATCAGAGGAAGTGG+AGG | + | chr6.3:4687948-4687967 | MS.gene20577:CDS | 60.0% | |
| GCCTCGGCCAACATCACACT+CGG | - | chr6.3:4685486-4685505 | None:intergenic | 60.0% | |
| GCTGGAATGGCACTGTGACG+AGG | + | chr6.3:4685658-4685677 | MS.gene20577:intron | 60.0% | |
| GCTTCCAAACGCCCCTCCTT+AGG | - | chr6.3:4687178-4687197 | None:intergenic | 60.0% | |
| GGAAGCTAGGCTACCCCAGT+GGG | + | chr6.3:4685412-4685431 | MS.gene20577:intron | 60.0% | |
| GGACACCCCGAGTGTGATGT+TGG | + | chr6.3:4685476-4685495 | MS.gene20577:intron | 60.0% | |
| GGAGCGCAATAGTGCGGCAA+TGG | + | chr6.3:4685572-4685591 | MS.gene20577:intron | 60.0% | |
| GTGTGATGTTGGCCGAGGCT+TGG | + | chr6.3:4685487-4685506 | MS.gene20577:intron | 60.0% | |
| TCGGCCGTCATCAGAGGAAG+TGG | + | chr6.3:4687945-4687964 | MS.gene20577:CDS | 60.0% | |
| CCCGAGTGTGATGTTGGCCG+AGG | + | chr6.3:4685482-4685501 | MS.gene20577:intron | 65.0% | |
| GATGTTGGCCGAGGCTTGGC+CGG | + | chr6.3:4685491-4685510 | MS.gene20577:intron | 65.0% | |
| GTGGGCGCCATGGCGCTTTA+TGG | - | chr6.3:4686581-4686600 | None:intergenic | 65.0% | |
| TAGGCTACCCCAGTGGGGAC+TGG | + | chr6.3:4685418-4685437 | MS.gene20577:intron | 65.0% | |
| ! | CTACCCCAGTGGGGACTGGT+AGG | + | chr6.3:4685422-4685441 | MS.gene20577:intron | 65.0% |
| !! | GTGAAGGATGGTGGGCGCCA+TGG | - | chr6.3:4686591-4686610 | None:intergenic | 65.0% |
| TTGGCCGAGGCTTGGCCGGT+TGG | + | chr6.3:4685495-4685514 | MS.gene20577:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 4683788 | 4688218 | 4683788 | ID=MS.gene20577 |
| chr6.3 | mRNA | 4683788 | 4688218 | 4683788 | ID=MS.gene20577.t1;Parent=MS.gene20577 |
| chr6.3 | exon | 4683788 | 4683975 | 4683788 | ID=MS.gene20577.t1.exon1;Parent=MS.gene20577.t1 |
| chr6.3 | CDS | 4683788 | 4683975 | 4683788 | ID=cds.MS.gene20577.t1;Parent=MS.gene20577.t1 |
| chr6.3 | exon | 4686001 | 4686280 | 4686001 | ID=MS.gene20577.t1.exon2;Parent=MS.gene20577.t1 |
| chr6.3 | CDS | 4686001 | 4686280 | 4686001 | ID=cds.MS.gene20577.t1;Parent=MS.gene20577.t1 |
| chr6.3 | exon | 4687505 | 4687603 | 4687505 | ID=MS.gene20577.t1.exon3;Parent=MS.gene20577.t1 |
| chr6.3 | CDS | 4687505 | 4687603 | 4687505 | ID=cds.MS.gene20577.t1;Parent=MS.gene20577.t1 |
| chr6.3 | exon | 4687931 | 4688218 | 4687931 | ID=MS.gene20577.t1.exon4;Parent=MS.gene20577.t1 |
| chr6.3 | CDS | 4687931 | 4688218 | 4687931 | ID=cds.MS.gene20577.t1;Parent=MS.gene20577.t1 |
| Gene Sequence |
| Protein sequence |
