Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29995.t1 | GAU49910.1 | 70.3 | 263 | 70 | 2 | 1 | 255 | 762 | 1024 | 7.30E-47 | 198 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29995.t1 | Q7XA42 | 29.7 | 158 | 104 | 5 | 1 | 153 | 720 | 875 | 1.8e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29995.t1 | A0A2Z6PG26 | 70.3 | 263 | 70 | 2 | 1 | 255 | 762 | 1024 | 5.3e-47 | 198.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene29995 | -0.809713 | 1.65E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene29995 | 0.803769 | 2.98E-49 | -1.69E-46 |
| MS.gene049549 | MS.gene29995 | 0.837356 | 5.46E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene29995 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene29995 | -0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene050647 | MS.gene29995 | 0.810832 | 9.47E-51 | -1.69E-46 |
| MS.gene050809 | MS.gene29995 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene05104 | MS.gene29995 | 0.820688 | 6.01E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene29995 | 0.813251 | 2.81E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene29995 | 0.830877 | 2.29E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene29995 | 0.824588 | 7.44E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene29995 | 0.814832 | 1.26E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene29995 | 0.828734 | 7.62E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene29995 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene29995 | 0.839713 | 1.34E-57 | -1.69E-46 |
| MS.gene05244 | MS.gene29995 | 0.842349 | 2.73E-58 | -1.69E-46 |
| MS.gene052606 | MS.gene29995 | 0.827537 | 1.48E-54 | -1.69E-46 |
| MS.gene052702 | MS.gene29995 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene052805 | MS.gene29995 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene053406 | MS.gene29995 | 0.802521 | 5.39E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene29995 | 0.848016 | 8.02E-60 | -1.69E-46 |
| MS.gene053488 | MS.gene29995 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene054146 | MS.gene29995 | 0.831441 | 1.67E-55 | -1.69E-46 |
| MS.gene054181 | MS.gene29995 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene054290 | MS.gene29995 | 0.809499 | 1.84E-50 | -1.69E-46 |
| MS.gene054421 | MS.gene29995 | 0.824917 | 6.23E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene29995 | 0.816567 | 5.17E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene29995 | -0.801238 | 9.89E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene29995 | 0.822319 | 2.52E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene29995 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene055240 | MS.gene29995 | 0.808781 | 2.62E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene29995 | -0.816028 | 6.83E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene29995 | -0.802528 | 5.38E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene29995 | 0.825549 | 4.41E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene29995 | 0.813338 | 2.69E-51 | -1.69E-46 |
| MS.gene056359 | MS.gene29995 | 0.809747 | 1.62E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene29995 | -0.806375 | 8.48E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene29995 | 0.823051 | 1.71E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene29995 | 0.822624 | 2.14E-53 | -1.69E-46 |
| MS.gene056688 | MS.gene29995 | 0.809783 | 1.59E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene29995 | 0.846862 | 1.66E-59 | -1.69E-46 |
| MS.gene056856 | MS.gene29995 | 0.845687 | 3.48E-59 | -1.69E-46 |
| MS.gene056920 | MS.gene29995 | 0.800053 | 1.73E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene29995 | 0.822679 | 2.08E-53 | -1.69E-46 |
| MS.gene057768 | MS.gene29995 | 0.807764 | 4.31E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene29995 | 0.823536 | 1.31E-53 | -1.69E-46 |
| MS.gene058158 | MS.gene29995 | 0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene29995 | -0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene29995 | -0.807806 | 4.22E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene29995 | 0.855987 | 4.36E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene29995 | -0.82065 | 6.13E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene29995 | -0.804163 | 2.46E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene29995 | -0.80757 | 4.74E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene29995 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene29995 | -0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene29995 | -0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene29995 | -0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene29995 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene29995 | 0.841809 | 3.79E-58 | -1.69E-46 |
| MS.gene060405 | MS.gene29995 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene29995 | -0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene29995 | -0.80742 | 5.10E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29995.t1 | MTR_5g035480 | 62.143 | 280 | 60 | 2 | 1 | 256 | 745 | 1002 | 2.32e-94 | 302 |
| MS.gene29995.t1 | MTR_5g035200 | 59.696 | 263 | 98 | 1 | 1 | 255 | 98 | 360 | 1.74e-91 | 278 |
| MS.gene29995.t1 | MTR_5g037500 | 52.962 | 287 | 103 | 4 | 1 | 255 | 697 | 983 | 8.62e-65 | 221 |
| MS.gene29995.t1 | MTR_5g035280 | 42.857 | 350 | 118 | 6 | 1 | 270 | 759 | 1106 | 3.85e-63 | 218 |
| MS.gene29995.t1 | MTR_3g026660 | 42.090 | 335 | 114 | 4 | 1 | 255 | 746 | 1080 | 4.72e-59 | 206 |
| MS.gene29995.t1 | MTR_3g026660 | 42.090 | 335 | 114 | 4 | 1 | 255 | 803 | 1137 | 5.69e-59 | 205 |
| MS.gene29995.t1 | MTR_5g037450 | 41.141 | 333 | 117 | 5 | 1 | 255 | 769 | 1100 | 7.18e-58 | 202 |
| MS.gene29995.t1 | MTR_5g035530 | 37.725 | 334 | 128 | 6 | 1 | 255 | 644 | 976 | 1.72e-52 | 186 |
| MS.gene29995.t1 | MTR_5g035240 | 50.962 | 208 | 89 | 2 | 1 | 200 | 757 | 959 | 4.43e-50 | 179 |
| MS.gene29995.t1 | MTR_5g040770 | 42.014 | 288 | 134 | 4 | 1 | 255 | 528 | 815 | 3.53e-48 | 174 |
| MS.gene29995.t1 | MTR_5g035450 | 49.275 | 207 | 83 | 5 | 119 | 317 | 140 | 332 | 3.30e-42 | 152 |
| MS.gene29995.t1 | MTR_5g034770 | 42.593 | 324 | 131 | 10 | 5 | 286 | 610 | 920 | 3.46e-42 | 157 |
| MS.gene29995.t1 | MTR_5g034770 | 48.673 | 113 | 50 | 3 | 1 | 107 | 740 | 850 | 1.84e-15 | 78.2 |
| MS.gene29995.t1 | MTR_5g071823 | 39.464 | 261 | 135 | 7 | 9 | 254 | 760 | 1012 | 1.50e-39 | 149 |
| MS.gene29995.t1 | MTR_5g071850 | 39.464 | 261 | 135 | 7 | 9 | 254 | 760 | 1012 | 1.50e-39 | 149 |
| MS.gene29995.t1 | MTR_4g055630 | 36.972 | 284 | 143 | 7 | 6 | 255 | 762 | 1043 | 3.10e-37 | 142 |
| MS.gene29995.t1 | MTR_5g071780 | 40.856 | 257 | 136 | 8 | 9 | 254 | 760 | 1011 | 6.61e-37 | 141 |
| MS.gene29995.t1 | MTR_5g071670 | 38.023 | 263 | 127 | 6 | 6 | 258 | 748 | 984 | 3.34e-36 | 139 |
| MS.gene29995.t1 | MTR_1g023600 | 38.846 | 260 | 145 | 6 | 5 | 254 | 755 | 1010 | 1.48e-35 | 137 |
| MS.gene29995.t1 | MTR_1g022380 | 36.364 | 264 | 146 | 6 | 5 | 254 | 753 | 1008 | 1.75e-35 | 137 |
| MS.gene29995.t1 | MTR_5g071470 | 37.600 | 250 | 122 | 5 | 15 | 255 | 764 | 988 | 2.31e-35 | 137 |
| MS.gene29995.t1 | MTR_7g071940 | 37.121 | 264 | 143 | 7 | 6 | 254 | 751 | 1006 | 2.89e-34 | 134 |
| MS.gene29995.t1 | MTR_5g072340 | 38.735 | 253 | 121 | 5 | 6 | 249 | 757 | 984 | 1.02e-33 | 132 |
| MS.gene29995.t1 | MTR_6g046620 | 34.591 | 318 | 129 | 9 | 9 | 249 | 706 | 1021 | 1.07e-33 | 132 |
| MS.gene29995.t1 | MTR_5g071220 | 39.382 | 259 | 133 | 7 | 6 | 248 | 759 | 1009 | 1.33e-33 | 132 |
| MS.gene29995.t1 | MTR_5g071220 | 39.382 | 259 | 133 | 7 | 6 | 248 | 759 | 1009 | 1.75e-33 | 131 |
| MS.gene29995.t1 | MTR_5g070490 | 37.549 | 253 | 124 | 6 | 6 | 249 | 752 | 979 | 1.14e-32 | 129 |
| MS.gene29995.t1 | MTR_5g070960 | 38.824 | 255 | 141 | 7 | 6 | 249 | 761 | 1011 | 1.41e-31 | 126 |
| MS.gene29995.t1 | MTR_6g046480 | 33.234 | 334 | 141 | 8 | 6 | 259 | 752 | 1083 | 1.75e-31 | 125 |
| MS.gene29995.t1 | MTR_6g046130 | 32.075 | 318 | 135 | 6 | 14 | 252 | 757 | 1072 | 6.12e-31 | 124 |
| MS.gene29995.t1 | MTR_6g047450 | 29.598 | 348 | 141 | 8 | 14 | 259 | 762 | 1107 | 1.34e-30 | 123 |
| MS.gene29995.t1 | MTR_5g070470 | 37.600 | 250 | 120 | 7 | 13 | 252 | 767 | 990 | 4.23e-30 | 122 |
| MS.gene29995.t1 | MTR_6g046440 | 29.377 | 337 | 146 | 6 | 14 | 259 | 705 | 1040 | 4.55e-30 | 121 |
| MS.gene29995.t1 | MTR_0256s0050 | 28.099 | 363 | 158 | 7 | 14 | 274 | 731 | 1092 | 8.94e-30 | 120 |
| MS.gene29995.t1 | MTR_3g086070 | 29.674 | 337 | 144 | 7 | 14 | 259 | 761 | 1095 | 7.41e-29 | 118 |
| MS.gene29995.t1 | MTR_5g071310 | 36.434 | 258 | 128 | 6 | 6 | 253 | 722 | 953 | 1.16e-28 | 117 |
| MS.gene29995.t1 | MTR_5g071800 | 36.328 | 256 | 147 | 6 | 6 | 249 | 755 | 1006 | 1.42e-27 | 114 |
| MS.gene29995.t1 | MTR_6g052455 | 28.075 | 374 | 170 | 9 | 9 | 291 | 651 | 1016 | 1.67e-27 | 114 |
| MS.gene29995.t1 | MTR_8g036195 | 30.702 | 342 | 140 | 8 | 14 | 260 | 746 | 1085 | 2.54e-27 | 113 |
| MS.gene29995.t1 | MTR_4g126000 | 35.659 | 258 | 149 | 8 | 9 | 255 | 625 | 876 | 3.48e-27 | 113 |
| MS.gene29995.t1 | MTR_0133s0020 | 29.688 | 320 | 140 | 7 | 14 | 249 | 770 | 1088 | 8.34e-27 | 112 |
| MS.gene29995.t1 | MTR_0511s0020 | 28.329 | 353 | 160 | 9 | 9 | 276 | 743 | 1087 | 1.59e-26 | 111 |
| MS.gene29995.t1 | MTR_6g016420 | 32.246 | 276 | 159 | 6 | 5 | 255 | 749 | 1021 | 1.64e-25 | 108 |
| MS.gene29995.t1 | MTR_5g072140 | 37.500 | 232 | 125 | 5 | 6 | 223 | 715 | 940 | 3.06e-25 | 107 |
| MS.gene29995.t1 | MTR_6g016430 | 31.618 | 272 | 158 | 4 | 9 | 255 | 777 | 1045 | 2.48e-24 | 104 |
| MS.gene29995.t1 | MTR_2g078070 | 29.739 | 306 | 155 | 8 | 4 | 252 | 783 | 1085 | 4.61e-24 | 103 |
| MS.gene29995.t1 | MTR_5g028750 | 27.134 | 328 | 154 | 8 | 9 | 252 | 745 | 1071 | 1.01e-23 | 102 |
| MS.gene29995.t1 | MTR_0133s0030 | 29.706 | 340 | 143 | 9 | 14 | 259 | 761 | 1098 | 1.82e-23 | 102 |
| MS.gene29995.t1 | MTR_5g028340 | 27.795 | 331 | 153 | 7 | 5 | 255 | 756 | 1080 | 2.47e-23 | 101 |
| MS.gene29995.t1 | MTR_6g052760 | 28.228 | 333 | 150 | 8 | 9 | 254 | 761 | 1091 | 3.03e-23 | 101 |
| MS.gene29995.t1 | MTR_6g046450 | 29.617 | 287 | 151 | 8 | 14 | 249 | 801 | 1087 | 3.10e-23 | 101 |
| MS.gene29995.t1 | MTR_0144s0060 | 33.613 | 238 | 122 | 6 | 14 | 216 | 757 | 993 | 4.29e-23 | 101 |
| MS.gene29995.t1 | MTR_6g046750 | 28.319 | 339 | 158 | 6 | 8 | 261 | 107 | 445 | 4.45e-23 | 100 |
| MS.gene29995.t1 | MTR_3g023320 | 30.000 | 360 | 153 | 11 | 1 | 263 | 750 | 1107 | 1.94e-22 | 99.4 |
| MS.gene29995.t1 | MTR_5g028610 | 27.950 | 322 | 156 | 6 | 9 | 254 | 754 | 1075 | 2.00e-22 | 99.0 |
| MS.gene29995.t1 | MTR_6g046760 | 32.740 | 281 | 151 | 8 | 4 | 252 | 156 | 430 | 2.13e-22 | 97.8 |
| MS.gene29995.t1 | MTR_6g046760 | 35.417 | 192 | 112 | 6 | 41 | 225 | 145 | 331 | 1.08e-16 | 81.3 |
| MS.gene29995.t1 | MTR_5g037460 | 35.714 | 182 | 101 | 5 | 78 | 255 | 632 | 801 | 4.84e-22 | 97.8 |
| MS.gene29995.t1 | MTR_6g046570 | 27.907 | 344 | 162 | 6 | 1 | 259 | 740 | 1082 | 6.32e-22 | 97.8 |
| MS.gene29995.t1 | MTR_0230s0010 | 32.500 | 240 | 132 | 9 | 9 | 225 | 702 | 934 | 1.50e-21 | 96.3 |
| MS.gene29995.t1 | MTR_6g046750 | 32.963 | 270 | 157 | 10 | 19 | 269 | 144 | 408 | 2.76e-21 | 94.4 |
| MS.gene29995.t1 | MTR_8g011600 | 29.730 | 296 | 161 | 6 | 5 | 255 | 500 | 793 | 5.11e-21 | 94.7 |
| MS.gene29995.t1 | MTR_6g046550 | 29.412 | 323 | 142 | 7 | 22 | 259 | 339 | 660 | 6.18e-21 | 94.4 |
| MS.gene29995.t1 | MTR_6g016420 | 29.885 | 261 | 147 | 5 | 5 | 255 | 749 | 983 | 1.69e-20 | 93.2 |
| MS.gene29995.t1 | MTR_8g037220 | 30.108 | 279 | 160 | 10 | 6 | 249 | 1457 | 1735 | 1.75e-20 | 93.6 |
| MS.gene29995.t1 | MTR_8g037220 | 30.466 | 279 | 159 | 10 | 6 | 249 | 1678 | 1956 | 1.80e-20 | 93.6 |
| MS.gene29995.t1 | MTR_5g028420 | 27.607 | 326 | 157 | 7 | 9 | 255 | 762 | 1087 | 2.91e-20 | 92.8 |
| MS.gene29995.t1 | MTR_0144s0010 | 29.310 | 290 | 118 | 6 | 53 | 257 | 120 | 407 | 4.19e-20 | 91.3 |
| MS.gene29995.t1 | MTR_6g046930 | 28.011 | 357 | 151 | 9 | 14 | 267 | 758 | 1111 | 9.01e-20 | 91.3 |
| MS.gene29995.t1 | MTR_5g071570 | 37.640 | 178 | 95 | 5 | 6 | 169 | 760 | 935 | 1.09e-19 | 90.9 |
| MS.gene29995.t1 | MTR_8g011850 | 32.374 | 278 | 152 | 10 | 5 | 246 | 1730 | 2007 | 2.23e-19 | 90.1 |
| MS.gene29995.t1 | MTR_5g028070 | 27.795 | 331 | 159 | 7 | 5 | 255 | 906 | 1236 | 4.10e-19 | 89.4 |
| MS.gene29995.t1 | MTR_7g013560 | 27.740 | 292 | 170 | 8 | 5 | 255 | 676 | 967 | 6.68e-18 | 85.5 |
| MS.gene29995.t1 | MTR_1g030770 | 29.021 | 286 | 162 | 6 | 6 | 252 | 627 | 910 | 1.28e-17 | 84.7 |
| MS.gene29995.t1 | MTR_2g062360 | 29.218 | 243 | 136 | 6 | 46 | 254 | 356 | 596 | 2.89e-17 | 83.2 |
| MS.gene29995.t1 | MTR_5g028290 | 26.331 | 338 | 160 | 7 | 5 | 255 | 784 | 1119 | 4.93e-17 | 82.8 |
| MS.gene29995.t1 | MTR_5g076840 | 32.453 | 265 | 137 | 10 | 5 | 256 | 620 | 855 | 1.47e-16 | 81.3 |
| MS.gene29995.t1 | MTR_8g011180 | 27.817 | 284 | 166 | 7 | 5 | 252 | 651 | 931 | 2.63e-16 | 80.5 |
| MS.gene29995.t1 | MTR_8g011550 | 27.306 | 271 | 160 | 6 | 22 | 255 | 661 | 931 | 2.75e-16 | 80.5 |
| MS.gene29995.t1 | MTR_7g091140 | 32.411 | 253 | 142 | 9 | 6 | 254 | 634 | 861 | 5.05e-16 | 80.1 |
| MS.gene29995.t1 | MTR_8g011320 | 27.645 | 293 | 166 | 8 | 5 | 255 | 610 | 898 | 5.23e-16 | 79.7 |
| MS.gene29995.t1 | MTR_8g445160 | 29.508 | 244 | 133 | 8 | 41 | 254 | 444 | 678 | 6.95e-16 | 79.3 |
| MS.gene29995.t1 | MTR_7g078300 | 31.655 | 278 | 142 | 9 | 6 | 257 | 594 | 849 | 7.07e-16 | 79.3 |
| MS.gene29995.t1 | MTR_6g452490 | 29.965 | 287 | 138 | 11 | 14 | 249 | 684 | 958 | 8.46e-16 | 79.0 |
| MS.gene29995.t1 | MTR_7g078640 | 31.250 | 256 | 126 | 7 | 5 | 257 | 608 | 816 | 1.10e-15 | 78.6 |
| MS.gene29995.t1 | MTR_8g011280 | 27.551 | 294 | 171 | 7 | 6 | 258 | 546 | 838 | 1.12e-15 | 78.6 |
| MS.gene29995.t1 | MTR_8g445980 | 29.845 | 258 | 144 | 7 | 5 | 254 | 613 | 841 | 1.32e-15 | 78.6 |
| MS.gene29995.t1 | MTR_0534s0010 | 29.630 | 162 | 88 | 2 | 118 | 254 | 6 | 166 | 1.43e-15 | 73.9 |
| MS.gene29995.t1 | MTR_1g047910 | 29.555 | 247 | 140 | 9 | 17 | 255 | 643 | 863 | 2.35e-15 | 77.8 |
| MS.gene29995.t1 | MTR_0511s0010 | 30.870 | 230 | 124 | 7 | 31 | 254 | 33 | 233 | 2.66e-15 | 74.7 |
| MS.gene29995.t1 | MTR_7g091550 | 30.189 | 265 | 124 | 8 | 8 | 239 | 611 | 847 | 3.09e-15 | 77.4 |
| MS.gene29995.t1 | MTR_6g046900 | 29.200 | 250 | 131 | 6 | 31 | 255 | 148 | 376 | 3.78e-15 | 76.3 |
| MS.gene29995.t1 | MTR_5g013650 | 33.333 | 192 | 112 | 7 | 3 | 183 | 28 | 214 | 3.80e-15 | 74.3 |
| MS.gene29995.t1 | MTR_4g119140 | 37.584 | 149 | 68 | 4 | 136 | 267 | 577 | 717 | 6.97e-15 | 76.3 |
| MS.gene29995.t1 | MTR_7g491180 | 42.169 | 83 | 48 | 0 | 172 | 254 | 779 | 861 | 1.06e-14 | 75.9 |
| MS.gene29995.t1 | MTR_7g091190 | 42.169 | 83 | 48 | 0 | 172 | 254 | 779 | 861 | 1.06e-14 | 75.9 |
| MS.gene29995.t1 | MTR_7g022290 | 31.746 | 189 | 110 | 5 | 80 | 249 | 324 | 512 | 2.23e-14 | 74.3 |
| MS.gene29995.t1 | MTR_1g078490 | 28.794 | 257 | 128 | 8 | 5 | 255 | 634 | 841 | 3.56e-14 | 73.9 |
| MS.gene29995.t1 | MTR_8g011170 | 27.758 | 281 | 148 | 9 | 5 | 252 | 637 | 895 | 5.14e-14 | 73.6 |
| MS.gene29995.t1 | MTR_8g010440 | 27.778 | 288 | 166 | 9 | 6 | 252 | 678 | 964 | 5.66e-14 | 73.6 |
| MS.gene29995.t1 | MTR_8g011590 | 27.106 | 273 | 163 | 7 | 5 | 252 | 567 | 828 | 1.84e-13 | 72.0 |
| MS.gene29995.t1 | MTR_4g094540 | 30.153 | 262 | 143 | 8 | 28 | 254 | 596 | 852 | 3.38e-13 | 71.2 |
| MS.gene29995.t1 | MTR_5g040900 | 31.660 | 259 | 96 | 8 | 5 | 254 | 696 | 882 | 7.63e-13 | 70.1 |
| MS.gene29995.t1 | MTR_8g027540 | 26.996 | 263 | 150 | 7 | 17 | 239 | 689 | 949 | 8.21e-13 | 70.1 |
| MS.gene29995.t1 | MTR_3g032110 | 29.054 | 296 | 157 | 11 | 1 | 249 | 822 | 1111 | 8.28e-13 | 70.1 |
| MS.gene29995.t1 | MTR_3g032340 | 29.054 | 296 | 157 | 11 | 1 | 249 | 825 | 1114 | 1.83e-12 | 68.9 |
| MS.gene29995.t1 | MTR_1g047800 | 28.674 | 279 | 132 | 10 | 8 | 231 | 774 | 1040 | 2.24e-12 | 68.6 |
| MS.gene29995.t1 | MTR_8g038590 | 34.259 | 216 | 97 | 12 | 52 | 255 | 1057 | 1239 | 2.56e-12 | 68.6 |
| MS.gene29995.t1 | MTR_7g091200 | 28.364 | 275 | 148 | 11 | 6 | 254 | 580 | 831 | 4.86e-12 | 67.8 |
| MS.gene29995.t1 | MTR_3g030960 | 27.935 | 247 | 153 | 7 | 1 | 224 | 774 | 1018 | 5.61e-12 | 67.4 |
| MS.gene29995.t1 | MTR_7g491190 | 28.364 | 275 | 148 | 11 | 6 | 254 | 561 | 812 | 6.27e-12 | 67.4 |
| MS.gene29995.t1 | MTR_3g435740 | 29.268 | 246 | 151 | 9 | 1 | 225 | 818 | 1061 | 9.51e-12 | 67.0 |
| MS.gene29995.t1 | MTR_3g014320 | 28.889 | 315 | 156 | 14 | 1 | 254 | 1029 | 1336 | 1.32e-11 | 66.2 |
| MS.gene29995.t1 | MTR_7g091110 | 35.714 | 84 | 54 | 0 | 172 | 255 | 758 | 841 | 2.80e-11 | 65.5 |
| MS.gene29995.t1 | MTR_3g021330 | 30.943 | 265 | 153 | 9 | 6 | 254 | 345 | 595 | 2.94e-11 | 65.1 |
| MS.gene29995.t1 | MTR_3g032500 | 28.674 | 279 | 168 | 10 | 1 | 256 | 778 | 1048 | 5.22e-11 | 64.7 |
| MS.gene29995.t1 | MTR_3g024460 | 28.369 | 282 | 148 | 10 | 23 | 254 | 479 | 756 | 5.42e-11 | 64.3 |
| MS.gene29995.t1 | MTR_8g017945 | 29.130 | 230 | 154 | 7 | 6 | 231 | 99 | 323 | 5.59e-11 | 64.3 |
| MS.gene29995.t1 | MTR_8g011300 | 24.759 | 311 | 160 | 10 | 6 | 260 | 675 | 967 | 6.55e-11 | 64.3 |
| MS.gene29995.t1 | MTR_3g086080 | 39.560 | 91 | 49 | 1 | 133 | 217 | 116 | 206 | 6.67e-11 | 62.0 |
| MS.gene29995.t1 | MTR_0002s0090 | 30.496 | 282 | 135 | 16 | 1 | 231 | 774 | 1045 | 7.18e-11 | 63.9 |
| MS.gene29995.t1 | MTR_3g035500 | 30.496 | 282 | 135 | 16 | 1 | 231 | 774 | 1045 | 7.18e-11 | 63.9 |
| MS.gene29995.t1 | MTR_4g019360 | 27.519 | 258 | 140 | 6 | 9 | 219 | 762 | 1019 | 7.47e-11 | 63.9 |
| MS.gene29995.t1 | MTR_4g022560 | 25.703 | 249 | 158 | 7 | 6 | 229 | 780 | 1026 | 8.72e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29995.t1 | AT1G69550 | 35.593 | 236 | 138 | 9 | 5 | 231 | 978 | 1208 | 4.40e-18 | 86.3 |
| MS.gene29995.t1 | AT1G69550 | 33.486 | 218 | 120 | 6 | 17 | 231 | 870 | 1065 | 2.49e-15 | 77.8 |
| MS.gene29995.t1 | AT1G69550 | 31.780 | 236 | 148 | 8 | 5 | 231 | 786 | 1017 | 9.14e-15 | 76.3 |
| MS.gene29995.t1 | AT5G44510 | 31.197 | 234 | 151 | 6 | 5 | 231 | 726 | 956 | 1.96e-14 | 75.1 |
| MS.gene29995.t1 | AT5G44510 | 30.901 | 233 | 147 | 8 | 8 | 231 | 681 | 908 | 8.75e-12 | 67.0 |
| MS.gene29995.t1 | AT5G44510 | 31.197 | 234 | 151 | 6 | 5 | 231 | 726 | 956 | 1.97e-14 | 75.1 |
| MS.gene29995.t1 | AT5G44510 | 30.901 | 233 | 147 | 8 | 8 | 231 | 681 | 908 | 1.04e-11 | 66.6 |
| MS.gene29995.t1 | AT5G44510 | 31.197 | 234 | 151 | 6 | 5 | 231 | 726 | 956 | 2.10e-14 | 75.1 |
| MS.gene29995.t1 | AT5G44510 | 30.901 | 233 | 147 | 8 | 8 | 231 | 681 | 908 | 1.15e-11 | 66.6 |
| MS.gene29995.t1 | AT5G44510 | 31.197 | 234 | 151 | 6 | 5 | 231 | 726 | 956 | 2.19e-14 | 75.1 |
| MS.gene29995.t1 | AT5G44510 | 30.901 | 233 | 147 | 8 | 8 | 231 | 681 | 908 | 1.18e-11 | 66.6 |
| MS.gene29995.t1 | AT3G25510 | 30.043 | 233 | 150 | 8 | 7 | 231 | 555 | 782 | 6.83e-13 | 70.5 |
| MS.gene29995.t1 | AT3G25510 | 30.043 | 233 | 150 | 8 | 7 | 231 | 555 | 782 | 6.83e-13 | 70.5 |
| MS.gene29995.t1 | AT3G44630 | 39.167 | 120 | 70 | 2 | 112 | 231 | 754 | 870 | 6.90e-12 | 67.4 |
| MS.gene29995.t1 | AT3G44630 | 39.167 | 120 | 70 | 2 | 112 | 231 | 754 | 870 | 6.90e-12 | 67.4 |
| MS.gene29995.t1 | AT3G44630 | 39.167 | 120 | 70 | 2 | 112 | 231 | 754 | 870 | 6.90e-12 | 67.4 |
| MS.gene29995.t1 | AT3G44630 | 39.167 | 120 | 70 | 2 | 112 | 231 | 754 | 870 | 7.94e-12 | 67.0 |
| MS.gene29995.t1 | AT3G44670 | 31.285 | 179 | 103 | 5 | 59 | 231 | 729 | 893 | 1.04e-11 | 66.6 |
| MS.gene29995.t1 | AT3G44670 | 31.285 | 179 | 103 | 5 | 59 | 231 | 729 | 893 | 1.04e-11 | 66.6 |
| MS.gene29995.t1 | AT3G04220 | 30.556 | 180 | 106 | 4 | 59 | 231 | 681 | 848 | 2.96e-11 | 65.1 |
| MS.gene29995.t1 | AT3G04220 | 29.412 | 238 | 140 | 7 | 6 | 231 | 656 | 877 | 3.01e-11 | 65.1 |
| MS.gene29995.t1 | AT3G44480 | 30.542 | 203 | 116 | 6 | 58 | 255 | 726 | 908 | 5.50e-11 | 64.7 |
| MS.gene29995.t1 | AT3G44480 | 30.542 | 203 | 116 | 6 | 58 | 255 | 726 | 908 | 5.50e-11 | 64.7 |
| MS.gene29995.t1 | AT3G44480 | 30.542 | 203 | 116 | 6 | 58 | 255 | 726 | 908 | 5.55e-11 | 64.3 |
| MS.gene29995.t1 | AT3G44480 | 30.542 | 203 | 116 | 6 | 58 | 255 | 726 | 908 | 5.81e-11 | 64.3 |
| MS.gene29995.t1 | AT3G44480 | 30.542 | 203 | 116 | 6 | 58 | 255 | 726 | 908 | 5.81e-11 | 64.3 |
| MS.gene29995.t1 | AT5G66910 | 29.851 | 201 | 120 | 6 | 94 | 274 | 599 | 798 | 7.56e-11 | 63.9 |
Find 89 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTAAGAAATTGAGTATT+TGG | 0.099740 | 7.1:-61077641 | MS.gene29995:CDS |
| CTCTTAAGGTATTGGCTATT+TGG | 0.144308 | 7.1:-61077989 | MS.gene29995:CDS |
| CACTTCAAGAACTAAGAATT+TGG | 0.150173 | 7.1:-61077497 | MS.gene29995:CDS |
| CATGTCCTCTGTACTTCTTC+TGG | 0.162150 | 7.1:-61076610 | MS.gene29995:CDS |
| TCTTAAGGTATTGGCTATTT+GGG | 0.220354 | 7.1:-61077988 | MS.gene29995:CDS |
| AGAATTAGAAATTGATGATT+TGG | 0.244080 | 7.1:-61077958 | MS.gene29995:CDS |
| TCTCACATTCAAAATCTTAA+TGG | 0.253066 | 7.1:-61077342 | MS.gene29995:intron |
| GAATTAGAAATTGATGATTT+GGG | 0.269971 | 7.1:-61077957 | MS.gene29995:CDS |
| CATGGCAAGCCCAACAAATT+AGG | 0.285072 | 7.1:+61077816 | None:intergenic |
| CTCAAAGAAATGACTATAAG+AGG | 0.290750 | 7.1:-61077783 | MS.gene29995:CDS |
| CTTGATAACCTTGTCAGATT+TGG | 0.300290 | 7.1:+61077894 | None:intergenic |
| ACATCCTTACCAGACTCTTT+AGG | 0.323527 | 7.1:-61077531 | MS.gene29995:CDS |
| TCCGAAGTTGATTTCTCTTC+CGG | 0.324902 | 7.1:-61077469 | MS.gene29995:CDS |
| ATGTCCTCTGTACTTCTTCT+GGG | 0.333017 | 7.1:-61076609 | MS.gene29995:CDS |
| TTGCTTAGAAATAGAAGGTT+TGG | 0.336655 | 7.1:-61077616 | MS.gene29995:CDS |
| ACTTCAAGAACTAAGAATTT+GGG | 0.338337 | 7.1:-61077496 | MS.gene29995:CDS |
| TCTTAAGAAATTGAGTATTT+GGG | 0.343423 | 7.1:-61077640 | MS.gene29995:CDS |
| TGACCTTCATTCGTTATCAT+TGG | 0.362713 | 7.1:-61077571 | MS.gene29995:CDS |
| ATTCATAAACTTGGTAGTCT+TGG | 0.365265 | 7.1:-61077732 | MS.gene29995:CDS |
| TGGGATTGCTTAGAAATAGA+AGG | 0.373927 | 7.1:-61077621 | MS.gene29995:CDS |
| CTTTAATATCGTTAAAACTA+AGG | 0.378695 | 7.1:+61077706 | None:intergenic |
| AACGGAATGTCCTAATTTGT+TGG | 0.379646 | 7.1:-61077826 | MS.gene29995:CDS |
| GGAGAAACTACCTTCTCTTA+AGG | 0.380387 | 7.1:-61078003 | MS.gene29995:CDS |
| ACTACCTTCTCTTAAGGTAT+TGG | 0.395506 | 7.1:-61077997 | MS.gene29995:CDS |
| ACGGAATGTCCTAATTTGTT+GGG | 0.399287 | 7.1:-61077825 | MS.gene29995:CDS |
| TTTGTAGTTTAGAAAGGTGT+TGG | 0.408444 | 7.1:+61077850 | None:intergenic |
| TTACTGCTCTGAAAAGTTTG+TGG | 0.421531 | 7.1:-61077431 | MS.gene29995:CDS |
| CACTTGAATGTATAGTTTGT+TGG | 0.427027 | 7.1:-61076650 | MS.gene29995:CDS |
| CAAAGGTTTCCTAAAGAGTC+TGG | 0.427402 | 7.1:+61077522 | None:intergenic |
| AAACAGTGTAAAAGTGAAAC+AGG | 0.427794 | 7.1:-61077384 | MS.gene29995:CDS |
| AAGTACAGAGGACATGTTAC+TGG | 0.428518 | 7.1:+61076617 | None:intergenic |
| CAAATCTGACAAGGTTATCA+AGG | 0.431823 | 7.1:-61077893 | MS.gene29995:CDS |
| CCGTTATTTGTAGTTTAGAA+AGG | 0.433141 | 7.1:+61077844 | None:intergenic |
| CTGTTTACACCTCCCGCAAT+TGG | 0.439546 | 7.1:-61078024 | MS.gene29995:CDS |
| CTAAGTTCAATTCATAAACT+TGG | 0.442260 | 7.1:-61077741 | MS.gene29995:CDS |
| AATGAACCCTTAGCATTGCT+TGG | 0.443387 | 7.1:+61075876 | None:intergenic |
| CATTTCCCAGAATGGATGTC+TGG | 0.444283 | 7.1:-61078095 | None:intergenic |
| ATTGATAATTGTCCTGAGTT+GGG | 0.445119 | 7.1:-61077408 | MS.gene29995:CDS |
| AGGTTTCTTAGCATCTCATC+TGG | 0.449037 | 7.1:+61077669 | None:intergenic |
| GAATTGAACTTAGTAAATCA+TGG | 0.453035 | 7.1:+61077751 | None:intergenic |
| AAACCGCGAATGCGATATAC+AGG | 0.454689 | 7.1:-61075942 | MS.gene29995:CDS |
| AAGGTAGTTTCTCCAATTGC+GGG | 0.465099 | 7.1:+61078012 | None:intergenic |
| AAGAGTCTGGTAAGGATGTC+AGG | 0.467233 | 7.1:+61077535 | None:intergenic |
| GCAATGCTAAGGGTTCATTC+AGG | 0.467412 | 7.1:-61075872 | MS.gene29995:CDS |
| GTAGAATTAATTGATGCAAC+AGG | 0.471280 | 7.1:+61075848 | None:intergenic |
| TCTGGTAAGGATGTCAGGTT+TGG | 0.477957 | 7.1:+61077540 | None:intergenic |
| TTTAATATCGTTAAAACTAA+GGG | 0.484565 | 7.1:+61077707 | None:intergenic |
| CCTTTCTAAACTACAAATAA+CGG | 0.502181 | 7.1:-61077844 | MS.gene29995:CDS |
| AGATAAACCAAGCAATGCTA+AGG | 0.511179 | 7.1:-61075883 | MS.gene29995:CDS |
| GATTGATAATTGTCCTGAGT+TGG | 0.513576 | 7.1:-61077409 | MS.gene29995:CDS |
| CAAATGAGAGAGGTGGTTGA+AGG | 0.514188 | 7.1:+61075971 | None:intergenic |
| TTCTGTAAATGTATTAAAGA+AGG | 0.517520 | 7.1:+61078071 | None:intergenic |
| ATAGTCATTTCTTTGAGAGA+TGG | 0.521300 | 7.1:+61077789 | None:intergenic |
| CTTAAGGTATTGGCTATTTG+GGG | 0.526178 | 7.1:-61077987 | MS.gene29995:CDS |
| AAGTATATAGCTTCTAGAGC+AGG | 0.534692 | 7.1:+61077927 | None:intergenic |
| TTACACTGTTTCCCCAACTC+AGG | 0.535605 | 7.1:+61077396 | None:intergenic |
| CCTCCTGTATATCGCATTCG+CGG | 0.536267 | 7.1:+61075939 | None:intergenic |
| GTTTGTTGTTAGAAAGGAGA+AGG | 0.540788 | 7.1:-61076028 | MS.gene29995:intron |
| AGAAATAGAAGGTTTGGATG+AGG | 0.546356 | 7.1:-61077610 | MS.gene29995:CDS |
| CTTCAAGAACTAAGAATTTG+GGG | 0.547865 | 7.1:-61077495 | MS.gene29995:CDS |
| GCTCCAATGATAACGAATGA+AGG | 0.553846 | 7.1:+61077568 | None:intergenic |
| AAAGTGAAACAGGTGTTGAT+TGG | 0.556443 | 7.1:-61077374 | MS.gene29995:CDS |
| GAAGGTAGTTTCTCCAATTG+CGG | 0.556781 | 7.1:+61078011 | None:intergenic |
| TCTTTGAGAGATGGAAGGCA+TGG | 0.560115 | 7.1:+61077798 | None:intergenic |
| AGAGGTGGTTGAAGGAATGA+TGG | 0.562170 | 7.1:+61075979 | None:intergenic |
| AATTAGAAATTGATGATTTG+GGG | 0.568281 | 7.1:-61077956 | MS.gene29995:CDS |
| GTTTCCTAAAGAGTCTGGTA+AGG | 0.572670 | 7.1:+61077527 | None:intergenic |
| TCAAAGAAATGACTATAAGA+GGG | 0.574105 | 7.1:-61077782 | MS.gene29995:CDS |
| TGTCCTCTGTACTTCTTCTG+GGG | 0.577849 | 7.1:-61076608 | MS.gene29995:CDS |
| TCATTTCTTTGAGAGATGGA+AGG | 0.579416 | 7.1:+61077793 | None:intergenic |
| TTAGTTCTTGAAGTGAACAA+AGG | 0.580087 | 7.1:+61077505 | None:intergenic |
| AAATCTGACAAGGTTATCAA+GGG | 0.584625 | 7.1:-61077892 | MS.gene29995:CDS |
| TGAATGTATAGTTTGTTGGA+CGG | 0.603151 | 7.1:-61076646 | MS.gene29995:CDS |
| TTGATAATTGTCCTGAGTTG+GGG | 0.603267 | 7.1:-61077407 | MS.gene29995:CDS |
| CTGAGCTACCAAATCTGACA+AGG | 0.604743 | 7.1:-61077902 | MS.gene29995:CDS |
| TCACTTGCAAATGAGAGAGG+TGG | 0.610093 | 7.1:+61075964 | None:intergenic |
| TCAATTTCTTAAGATTAGTG+AGG | 0.610852 | 7.1:+61077649 | None:intergenic |
| ACAAGGTTATCAAGGGAGGA+TGG | 0.610890 | 7.1:-61077885 | MS.gene29995:CDS |
| ATAGCCAATACCTTAAGAGA+AGG | 0.611771 | 7.1:+61077993 | None:intergenic |
| GATAAACCAAGCAATGCTAA+GGG | 0.619794 | 7.1:-61075882 | MS.gene29995:CDS |
| GTTTCACTTGCAAATGAGAG+AGG | 0.627642 | 7.1:+61075961 | None:intergenic |
| GTAAGGCTTTGAATGCTCGC+CGG | 0.629199 | 7.1:+61077450 | None:intergenic |
| GCCGGAAGAGAAATCAACTT+CGG | 0.636225 | 7.1:+61077468 | None:intergenic |
| TCTGACAAGGTTATCAAGGG+AGG | 0.639246 | 7.1:-61077889 | MS.gene29995:CDS |
| GTCAGTAGAAGTGCTTGCAG+AGG | 0.665071 | 7.1:+61076001 | None:intergenic |
| GTAGTTTCTCCAATTGCGGG+AGG | 0.669005 | 7.1:+61078015 | None:intergenic |
| CCGCGAATGCGATATACAGG+AGG | 0.682585 | 7.1:-61075939 | MS.gene29995:CDS |
| AGACAACCCTCTGAGCACAA+AGG | 0.694026 | 7.1:-61076582 | MS.gene29995:intron |
| TAACCCCAGAAGAAGTACAG+AGG | 0.751413 | 7.1:+61076605 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAGAATAAATCTAAACT+AGG | + | chr7.1:61077848-61077867 | None:intergenic | 15.0% |
| !! | TTTAATATCGTTAAAACTAA+GGG | + | chr7.1:61076230-61076249 | None:intergenic | 15.0% |
| !!! | AATGTTTTTAACTGATTTAT+AGG | - | chr7.1:61077553-61077572 | MS.gene29995:CDS | 15.0% |
| !!! | CACTATTTGTTTTAAAAATT+AGG | - | chr7.1:61076927-61076946 | MS.gene29995:intron | 15.0% |
| !! | AACACATGAATTAAAGTTAA+TGG | + | chr7.1:61076770-61076789 | None:intergenic | 20.0% |
| !! | ATCTTAAGAAATTGAGTATT+TGG | - | chr7.1:61076293-61076312 | MS.gene29995:intron | 20.0% |
| !! | ATTAGGTACTTTAAATTCTT+CGG | - | chr7.1:61076944-61076963 | MS.gene29995:intron | 20.0% |
| !! | CTTTAATATCGTTAAAACTA+AGG | + | chr7.1:61076231-61076250 | None:intergenic | 20.0% |
| !! | TCTTAAGAAATTGAGTATTT+GGG | - | chr7.1:61076294-61076313 | MS.gene29995:intron | 20.0% |
| !! | TGAATAATACAAACAAATTG+AGG | - | chr7.1:61076968-61076987 | MS.gene29995:intron | 20.0% |
| !! | TTCTGTAAATGTATTAAAGA+AGG | + | chr7.1:61075866-61075885 | None:intergenic | 20.0% |
| !! | TTGGATTTATGATGTATATA+TGG | - | chr7.1:61077488-61077507 | MS.gene29995:CDS | 20.0% |
| !!! | AATTAGAAATTGATGATTTG+GGG | - | chr7.1:61075978-61075997 | MS.gene29995:CDS | 20.0% |
| !!! | AGAATTAGAAATTGATGATT+TGG | - | chr7.1:61075976-61075995 | MS.gene29995:CDS | 20.0% |
| !!! | CAATTTGAAGTCAATAAAAT+TGG | + | chr7.1:61077238-61077257 | None:intergenic | 20.0% |
| !!! | GAATTAGAAATTGATGATTT+GGG | - | chr7.1:61075977-61075996 | MS.gene29995:CDS | 20.0% |
| !!! | TTTTCTTCAACCAAATAATT+GGG | - | chr7.1:61077014-61077033 | MS.gene29995:intron | 20.0% |
| !!! | TTTTGAATGTGAGATATTTT+TGG | + | chr7.1:61076586-61076605 | None:intergenic | 20.0% |
| ! | AAATCTTCAATAATCAAAGC+AGG | + | chr7.1:61076812-61076831 | None:intergenic | 25.0% |
| ! | AATCTTCAATAATCAAAGCA+GGG | + | chr7.1:61076811-61076830 | None:intergenic | 25.0% |
| ! | ACTTCAAGAACTAAGAATTT+GGG | - | chr7.1:61076438-61076457 | MS.gene29995:intron | 25.0% |
| ! | ATATGATGTATTATACAGCT+TGG | + | chr7.1:61077649-61077668 | None:intergenic | 25.0% |
| ! | CCTTTCTAAACTACAAATAA+CGG | - | chr7.1:61076090-61076109 | MS.gene29995:intron | 25.0% |
| ! | CTAAGTTCAATTCATAAACT+TGG | - | chr7.1:61076193-61076212 | MS.gene29995:intron | 25.0% |
| ! | CTATCATCTAAAAAAACAGT+GGG | + | chr7.1:61077181-61077200 | None:intergenic | 25.0% |
| ! | GAATTGAACTTAGTAAATCA+TGG | + | chr7.1:61076186-61076205 | None:intergenic | 25.0% |
| ! | GCTTTGATTATTGAAGATTT+GGG | - | chr7.1:61076812-61076831 | MS.gene29995:intron | 25.0% |
| ! | GTTTATTTGTTCAGATCTAA+AGG | - | chr7.1:61076857-61076876 | MS.gene29995:intron | 25.0% |
| ! | TCAAAGAAATGACTATAAGA+GGG | - | chr7.1:61076152-61076171 | MS.gene29995:intron | 25.0% |
| ! | TCAATTTCTTAAGATTAGTG+AGG | + | chr7.1:61076288-61076307 | None:intergenic | 25.0% |
| ! | TCTCACATTCAAAATCTTAA+TGG | - | chr7.1:61076592-61076611 | MS.gene29995:CDS | 25.0% |
| ! | TGCTTTGATTATTGAAGATT+TGG | - | chr7.1:61076811-61076830 | MS.gene29995:intron | 25.0% |
| !! | CTTTTTGTATGATTAAGACT+TGG | - | chr7.1:61077469-61077488 | MS.gene29995:CDS | 25.0% |
| !! | GATAAAATCGAAGTATTAAG+AGG | + | chr7.1:61076639-61076658 | None:intergenic | 25.0% |
| !! | GTTTTATCAACTTCATACAT+TGG | + | chr7.1:61077423-61077442 | None:intergenic | 25.0% |
| !! | GTTTTCTTCAACCAAATAAT+TGG | - | chr7.1:61077013-61077032 | MS.gene29995:intron | 25.0% |
| !! | TTTAACTGATTTATAGGACA+TGG | - | chr7.1:61077559-61077578 | MS.gene29995:CDS | 25.0% |
| !! | TTTGCCATTTGTGTTTATAT+AGG | - | chr7.1:61077822-61077841 | MS.gene29995:CDS | 25.0% |
| !!! | AACTTTTGAAATGTTACGTT+AGG | - | chr7.1:61077440-61077459 | MS.gene29995:CDS | 25.0% |
| !!! | AAGTACAGATTTTAGCATTT+AGG | - | chr7.1:61077740-61077759 | MS.gene29995:CDS | 25.0% |
| !!! | TATTCTGTTTGTTGTTAGAA+AGG | - | chr7.1:61077900-61077919 | MS.gene29995:CDS | 25.0% |
| !!! | TGTGTTATACTTTTTTTCAC+AGG | - | chr7.1:61076784-61076803 | MS.gene29995:intron | 25.0% |
| AAACAGTGTAAAAGTGAAAC+AGG | - | chr7.1:61076550-61076569 | MS.gene29995:intron | 30.0% | |
| AAATCTGACAAGGTTATCAA+GGG | - | chr7.1:61076042-61076061 | MS.gene29995:intron | 30.0% | |
| ATTTGTTCAGATCTAAAGGA+AGG | - | chr7.1:61076861-61076880 | MS.gene29995:intron | 30.0% | |
| CACTTCAAGAACTAAGAATT+TGG | - | chr7.1:61076437-61076456 | MS.gene29995:intron | 30.0% | |
| CCGTTATTTGTAGTTTAGAA+AGG | + | chr7.1:61076093-61076112 | None:intergenic | 30.0% | |
| CCTATCATCTAAAAAAACAG+TGG | + | chr7.1:61077182-61077201 | None:intergenic | 30.0% | |
| CTCAAAGAAATGACTATAAG+AGG | - | chr7.1:61076151-61076170 | MS.gene29995:intron | 30.0% | |
| CTTCAAGAACTAAGAATTTG+GGG | - | chr7.1:61076439-61076458 | MS.gene29995:intron | 30.0% | |
| GAAAAAATCATGAGACATCT+TGG | - | chr7.1:61078017-61078036 | MS.gene29995:CDS | 30.0% | |
| GAAAGCAGAGATTAAACATT+CGG | + | chr7.1:61077769-61077788 | None:intergenic | 30.0% | |
| GTGTACACCTTCTATAATTA+TGG | - | chr7.1:61076664-61076683 | MS.gene29995:intron | 30.0% | |
| TACAACACAAATGGTTATAG+AGG | + | chr7.1:61077155-61077174 | None:intergenic | 30.0% | |
| TAGGCCTATATAAACACAAA+TGG | + | chr7.1:61077829-61077848 | None:intergenic | 30.0% | |
| TATAATTATGGCTCTCCTTA+AGG | - | chr7.1:61076676-61076695 | MS.gene29995:intron | 30.0% | |
| TTGCTTAGAAATAGAAGGTT+TGG | - | chr7.1:61076318-61076337 | MS.gene29995:intron | 30.0% | |
| ! | AAAATCGAAGTATTAAGAGG+AGG | + | chr7.1:61076636-61076655 | None:intergenic | 30.0% |
| ! | ATAGTCATTTCTTTGAGAGA+TGG | + | chr7.1:61076148-61076167 | None:intergenic | 30.0% |
| ! | ATTCATAAACTTGGTAGTCT+TGG | - | chr7.1:61076202-61076221 | MS.gene29995:intron | 30.0% |
| ! | ATTGATAATTGTCCTGAGTT+GGG | - | chr7.1:61076526-61076545 | MS.gene29995:intron | 30.0% |
| ! | CACTTGAATGTATAGTTTGT+TGG | - | chr7.1:61077284-61077303 | MS.gene29995:intron | 30.0% |
| ! | TTAGTTCTTGAAGTGAACAA+AGG | + | chr7.1:61076432-61076451 | None:intergenic | 30.0% |
| ! | TTGTGTTGAGCATTTTGTTA+TGG | - | chr7.1:61076726-61076745 | MS.gene29995:intron | 30.0% |
| ! | TTTGTAGTTTAGAAAGGTGT+TGG | + | chr7.1:61076087-61076106 | None:intergenic | 30.0% |
| !! | TACAGATTTTAGCATTTAGG+TGG | - | chr7.1:61077743-61077762 | MS.gene29995:CDS | 30.0% |
| !! | TCTTAAGGTATTGGCTATTT+GGG | - | chr7.1:61075946-61075965 | MS.gene29995:CDS | 30.0% |
| !! | TGAATGTATAGTTTGTTGGA+CGG | - | chr7.1:61077288-61077307 | MS.gene29995:intron | 30.0% |
| !! | TGTGTTGAGCATTTTGTTAT+GGG | - | chr7.1:61076727-61076746 | MS.gene29995:intron | 30.0% |
| !!! | CCACTGTTTTTTTAGATGAT+AGG | - | chr7.1:61077179-61077198 | MS.gene29995:intron | 30.0% |
| ACAAAATGCTCAACACAACA+CGG | + | chr7.1:61076724-61076743 | None:intergenic | 35.0% | |
| ACAAATGGCAAAAAGACACA+AGG | + | chr7.1:61077814-61077833 | None:intergenic | 35.0% | |
| ACAACTTGAGCCCAATTATT+TGG | + | chr7.1:61077027-61077046 | None:intergenic | 35.0% | |
| ACTACCTTCTCTTAAGGTAT+TGG | - | chr7.1:61075937-61075956 | MS.gene29995:CDS | 35.0% | |
| AGAAATAGAAGGTTTGGATG+AGG | - | chr7.1:61076324-61076343 | MS.gene29995:intron | 35.0% | |
| AGATAAACCAAGCAATGCTA+AGG | - | chr7.1:61078051-61078070 | MS.gene29995:CDS | 35.0% | |
| AGGAGAGCCATAATTATAGA+AGG | + | chr7.1:61076674-61076693 | None:intergenic | 35.0% | |
| AGTGGGTAATACAACACAAA+TGG | + | chr7.1:61077164-61077183 | None:intergenic | 35.0% | |
| ATAGCCAATACCTTAAGAGA+AGG | + | chr7.1:61075944-61075963 | None:intergenic | 35.0% | |
| ATGGTTATAGAGGCAAATGT+TGG | + | chr7.1:61077145-61077164 | None:intergenic | 35.0% | |
| CAAATCTGACAAGGTTATCA+AGG | - | chr7.1:61076041-61076060 | MS.gene29995:intron | 35.0% | |
| GAAGACGAAAAATACTTCAC+TGG | - | chr7.1:61077395-61077414 | MS.gene29995:CDS | 35.0% | |
| GATAAACCAAGCAATGCTAA+GGG | - | chr7.1:61078052-61078071 | MS.gene29995:CDS | 35.0% | |
| GGAAGAAAAGAACATCCTTA+AGG | + | chr7.1:61076694-61076713 | None:intergenic | 35.0% | |
| TGACCTTCATTCGTTATCAT+TGG | - | chr7.1:61076363-61076382 | MS.gene29995:intron | 35.0% | |
| TGGGATTGCTTAGAAATAGA+AGG | - | chr7.1:61076313-61076332 | MS.gene29995:intron | 35.0% | |
| TGTTGGAGATTCCAAAAGTT+CGG | + | chr7.1:61077128-61077147 | None:intergenic | 35.0% | |
| ! | AACAAATTGAGGCTTTTGCT+CGG | - | chr7.1:61076979-61076998 | MS.gene29995:intron | 35.0% |
| ! | AACGGAATGTCCTAATTTGT+TGG | - | chr7.1:61076108-61076127 | MS.gene29995:intron | 35.0% |
| ! | ACAAACTTTTCAGAGCAGTA+AGG | + | chr7.1:61076504-61076523 | None:intergenic | 35.0% |
| ! | AGAACTCGAGTTTGATTTCT+GGG | - | chr7.1:61077080-61077099 | MS.gene29995:intron | 35.0% |
| ! | CTTGATAACCTTGTCAGATT+TGG | + | chr7.1:61076043-61076062 | None:intergenic | 35.0% |
| ! | GATTGATAATTGTCCTGAGT+TGG | - | chr7.1:61076525-61076544 | MS.gene29995:intron | 35.0% |
| ! | TCATTTCTTTGAGAGATGGA+AGG | + | chr7.1:61076144-61076163 | None:intergenic | 35.0% |
| ! | TTGATAATTGTCCTGAGTTG+GGG | - | chr7.1:61076527-61076546 | MS.gene29995:intron | 35.0% |
| !! | AAAGTGAAACAGGTGTTGAT+TGG | - | chr7.1:61076560-61076579 | MS.gene29995:intron | 35.0% |
| !! | AAGTATATAGCTTCTAGAGC+AGG | + | chr7.1:61076010-61076029 | None:intergenic | 35.0% |
| !! | ACGGAATGTCCTAATTTGTT+GGG | - | chr7.1:61076109-61076128 | MS.gene29995:intron | 35.0% |
| !! | CTCTTAAGGTATTGGCTATT+TGG | - | chr7.1:61075945-61075964 | MS.gene29995:CDS | 35.0% |
| !! | CTTAAGGTATTGGCTATTTG+GGG | - | chr7.1:61075947-61075966 | MS.gene29995:CDS | 35.0% |
| !! | GTTTGTTGTTAGAAAGGAGA+AGG | - | chr7.1:61077906-61077925 | MS.gene29995:CDS | 35.0% |
| !! | TTACTGCTCTGAAAAGTTTG+TGG | - | chr7.1:61076503-61076522 | MS.gene29995:intron | 35.0% |
| AAAATGCTCAACACAACACG+GGG | + | chr7.1:61076722-61076741 | None:intergenic | 40.0% | |
| AAAATTATCAGCAGTCGACG+AGG | + | chr7.1:61077709-61077728 | None:intergenic | 40.0% | |
| AAGGTAGTTTCTCCAATTGC+GGG | + | chr7.1:61075925-61075944 | None:intergenic | 40.0% | |
| AAGTACAGAGGACATGTTAC+TGG | + | chr7.1:61077320-61077339 | None:intergenic | 40.0% | |
| AATGAACCCTTAGCATTGCT+TGG | + | chr7.1:61078061-61078080 | None:intergenic | 40.0% | |
| ACATCCTTACCAGACTCTTT+AGG | - | chr7.1:61076403-61076422 | MS.gene29995:intron | 40.0% | |
| AGGTTTCTTAGCATCTCATC+TGG | + | chr7.1:61076268-61076287 | None:intergenic | 40.0% | |
| ATGTCCTCTGTACTTCTTCT+GGG | - | chr7.1:61077325-61077344 | MS.gene29995:intron | 40.0% | |
| CAAAATGCTCAACACAACAC+GGG | + | chr7.1:61076723-61076742 | None:intergenic | 40.0% | |
| CAAAGGTTTCCTAAAGAGTC+TGG | + | chr7.1:61076415-61076434 | None:intergenic | 40.0% | |
| GAAGGTAGTTTCTCCAATTG+CGG | + | chr7.1:61075926-61075945 | None:intergenic | 40.0% | |
| GGAGAAACTACCTTCTCTTA+AGG | - | chr7.1:61075931-61075950 | MS.gene29995:CDS | 40.0% | |
| GTTTCACTTGCAAATGAGAG+AGG | + | chr7.1:61077976-61077995 | None:intergenic | 40.0% | |
| GTTTCCTAAAGAGTCTGGTA+AGG | + | chr7.1:61076410-61076429 | None:intergenic | 40.0% | |
| ! | AGAGTGTCTCAGACAACAAA+AGG | + | chr7.1:61077791-61077810 | None:intergenic | 40.0% |
| ! | AGTTTTACCTTTGTGCTCAG+AGG | + | chr7.1:61077362-61077381 | None:intergenic | 40.0% |
| ! | GAGAACTCGAGTTTGATTTC+TGG | - | chr7.1:61077079-61077098 | MS.gene29995:intron | 40.0% |
| ! | GCTCCAATGATAACGAATGA+AGG | + | chr7.1:61076369-61076388 | None:intergenic | 40.0% |
| ! | GTTTTACCTTTGTGCTCAGA+GGG | + | chr7.1:61077361-61077380 | None:intergenic | 40.0% |
| ! | TCCGAAGTTGATTTCTCTTC+CGG | - | chr7.1:61076465-61076484 | MS.gene29995:intron | 40.0% |
| AAACCGCGAATGCGATATAC+AGG | - | chr7.1:61077992-61078011 | MS.gene29995:CDS | 45.0% | |
| AAGAGTCTGGTAAGGATGTC+AGG | + | chr7.1:61076402-61076421 | None:intergenic | 45.0% | |
| ACAAGGTTATCAAGGGAGGA+TGG | - | chr7.1:61076049-61076068 | MS.gene29995:intron | 45.0% | |
| AGAGGTGGTTGAAGGAATGA+TGG | + | chr7.1:61077958-61077977 | None:intergenic | 45.0% | |
| CAAATGAGAGAGGTGGTTGA+AGG | + | chr7.1:61077966-61077985 | None:intergenic | 45.0% | |
| CATGGCAAGCCCAACAAATT+AGG | + | chr7.1:61076121-61076140 | None:intergenic | 45.0% | |
| CATGTCCTCTGTACTTCTTC+TGG | - | chr7.1:61077324-61077343 | MS.gene29995:intron | 45.0% | |
| CTCTCAAGCGATTCAACGTT+TGG | + | chr7.1:61077062-61077081 | None:intergenic | 45.0% | |
| CTGAGCTACCAAATCTGACA+AGG | - | chr7.1:61076032-61076051 | MS.gene29995:intron | 45.0% | |
| GCAATGCTAAGGGTTCATTC+AGG | - | chr7.1:61078062-61078081 | MS.gene29995:CDS | 45.0% | |
| GCCGGAAGAGAAATCAACTT+CGG | + | chr7.1:61076469-61076488 | None:intergenic | 45.0% | |
| GCTAAGCGATACTTGTCTTG+CGG | - | chr7.1:61077102-61077121 | MS.gene29995:intron | 45.0% | |
| TCAAGCGATTCAACGTTTGG+TGG | + | chr7.1:61077059-61077078 | None:intergenic | 45.0% | |
| TCACTTGCAAATGAGAGAGG+TGG | + | chr7.1:61077973-61077992 | None:intergenic | 45.0% | |
| TCTGACAAGGTTATCAAGGG+AGG | - | chr7.1:61076045-61076064 | MS.gene29995:intron | 45.0% | |
| TCTGGTAAGGATGTCAGGTT+TGG | + | chr7.1:61076397-61076416 | None:intergenic | 45.0% | |
| TGTCCTCTGTACTTCTTCTG+GGG | - | chr7.1:61077326-61077345 | MS.gene29995:intron | 45.0% | |
| TTACACTGTTTCCCCAACTC+AGG | + | chr7.1:61076541-61076560 | None:intergenic | 45.0% | |
| ! | TAACCCCAGAAGAAGTACAG+AGG | + | chr7.1:61077332-61077351 | None:intergenic | 45.0% |
| ! | TCTTTGAGAGATGGAAGGCA+TGG | + | chr7.1:61076139-61076158 | None:intergenic | 45.0% |
| AGACAACCCTCTGAGCACAA+AGG | - | chr7.1:61077352-61077371 | MS.gene29995:CDS | 50.0% | |
| CCTCCTGTATATCGCATTCG+CGG | + | chr7.1:61077998-61078017 | None:intergenic | 50.0% | |
| CTGTTTACACCTCCCGCAAT+TGG | - | chr7.1:61075910-61075929 | MS.gene29995:CDS | 50.0% | |
| GTAGTTTCTCCAATTGCGGG+AGG | + | chr7.1:61075922-61075941 | None:intergenic | 50.0% | |
| TCAACACAACACGGGGAAAG+AGG | + | chr7.1:61076715-61076734 | None:intergenic | 50.0% | |
| TTATCAGCAGTCGACGAGGA+TGG | + | chr7.1:61077705-61077724 | None:intergenic | 50.0% | |
| ! | TTGTCTTGCGGCCGAACTTT+TGG | - | chr7.1:61077114-61077133 | MS.gene29995:intron | 50.0% |
| !! | GTAAGGCTTTGAATGCTCGC+CGG | + | chr7.1:61076487-61076506 | None:intergenic | 50.0% |
| !! | GTCAGTAGAAGTGCTTGCAG+AGG | + | chr7.1:61077936-61077955 | None:intergenic | 50.0% |
| CCGCGAATGCGATATACAGG+AGG | - | chr7.1:61077995-61078014 | MS.gene29995:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 61075854 | 61078102 | 61075854 | ID=MS.gene29995 |
| chr7.1 | mRNA | 61075854 | 61078102 | 61075854 | ID=MS.gene29995.t1;Parent=MS.gene29995 |
| chr7.1 | exon | 61077343 | 61078102 | 61077343 | ID=MS.gene29995.t1.exon1;Parent=MS.gene29995.t1 |
| chr7.1 | CDS | 61077343 | 61078102 | 61077343 | ID=cds.MS.gene29995.t1;Parent=MS.gene29995.t1 |
| chr7.1 | exon | 61076583 | 61076681 | 61076583 | ID=MS.gene29995.t1.exon2;Parent=MS.gene29995.t1 |
| chr7.1 | CDS | 61076583 | 61076681 | 61076583 | ID=cds.MS.gene29995.t1;Parent=MS.gene29995.t1 |
| chr7.1 | exon | 61075854 | 61076038 | 61075854 | ID=MS.gene29995.t1.exon3;Parent=MS.gene29995.t1 |
| chr7.1 | CDS | 61075854 | 61076038 | 61075854 | ID=cds.MS.gene29995.t1;Parent=MS.gene29995.t1 |
| Gene Sequence |
| Protein sequence |
