Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33652.t1 | XP_013466432.1 | 98.8 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.00E+00 | 1157.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33652.t1 | Q9SDQ3 | 59.9 | 598 | 214 | 11 | 1 | 592 | 16 | 593 | 3.9e-182 | 639.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33652.t1 | A0A072VGC8 | 98.8 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.0e+00 | 1157.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33652.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene33652 | -0.823246 | 1.54E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene33652 | -0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene33652 | -0.809227 | 2.10E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene33652 | -0.82469 | 7.04E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene33652 | -0.827491 | 1.52E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene33652 | -0.810565 | 1.08E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene33652 | -0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene33652 | -0.81006 | 1.39E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene33652 | -0.816893 | 4.37E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene33652 | -0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene33652 | -0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene33652 | -0.821382 | 4.16E-53 | -1.69E-46 |
| MS.gene052287 | MS.gene33652 | -0.829766 | 4.28E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene33652 | -0.802397 | 5.72E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene33652 | -0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene33652 | -0.835626 | 1.50E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene33652 | -0.832213 | 1.07E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene33652 | -0.809469 | 1.86E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene33652 | -0.81432 | 1.64E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene33652 | -0.810289 | 1.24E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene33652 | -0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene054804 | MS.gene33652 | -0.810021 | 1.42E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene33652 | -0.801466 | 8.89E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene33652 | -0.835558 | 1.56E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene33652 | -0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene33652 | -0.810105 | 1.36E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene33652 | -0.832777 | 7.79E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene33652 | -0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene33652 | -0.819065 | 1.41E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene33652 | -0.806025 | 1.01E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene33652 | -0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene33652 | -0.842011 | 3.35E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene33652 | -0.869358 | 3.29E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene33652 | -0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene056611 | MS.gene33652 | -0.853383 | 2.48E-61 | -1.69E-46 |
| MS.gene056931 | MS.gene33652 | -0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene33652 | -0.815201 | 1.04E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene33652 | -0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene33652 | -0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene057285 | MS.gene33652 | -0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene33652 | -0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene33652 | -0.834196 | 3.45E-56 | -1.69E-46 |
| MS.gene058903 | MS.gene33652 | -0.808935 | 2.42E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene33652 | -0.806858 | 6.71E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene33652 | -0.811175 | 7.98E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene33652 | -0.82019 | 7.82E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene33652 | -0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene33652 | -0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene33652 | -0.814858 | 1.24E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene33652 | -0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene33652 | -0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene33652 | -0.817534 | 3.14E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene33652 | -0.808818 | 2.57E-50 | -1.69E-46 |
| MS.gene059974 | MS.gene33652 | -0.861371 | 1.08E-63 | -1.69E-46 |
| MS.gene060005 | MS.gene33652 | -0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene060356 | MS.gene33652 | -0.801832 | 7.48E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene33652 | -0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene33652 | -0.806461 | 8.14E-50 | -1.69E-46 |
| MS.gene060799 | MS.gene33652 | -0.826243 | 3.02E-54 | -1.69E-46 |
| MS.gene060800 | MS.gene33652 | -0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene060801 | MS.gene33652 | -0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene33652 | -0.801064 | 1.07E-48 | -1.69E-46 |
| MS.gene060818 | MS.gene33652 | -0.82692 | 2.08E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene33652 | -0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene33652 | -0.829807 | 4.19E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33652.t1 | MTR_1g029420 | 98.818 | 592 | 7 | 0 | 1 | 592 | 1 | 592 | 0.0 | 1218 |
| MS.gene33652.t1 | MTR_3g089055 | 70.451 | 599 | 136 | 7 | 1 | 592 | 6 | 570 | 0.0 | 816 |
| MS.gene33652.t1 | MTR_3g089055 | 70.451 | 599 | 136 | 7 | 1 | 592 | 1 | 565 | 0.0 | 816 |
| MS.gene33652.t1 | MTR_5g097480 | 55.946 | 370 | 163 | 0 | 223 | 592 | 175 | 544 | 1.29e-159 | 468 |
| MS.gene33652.t1 | MTR_2g082090 | 43.551 | 535 | 289 | 3 | 70 | 591 | 44 | 578 | 3.79e-150 | 445 |
| MS.gene33652.t1 | MTR_3g056110 | 50.270 | 370 | 184 | 0 | 223 | 592 | 173 | 542 | 4.35e-142 | 423 |
| MS.gene33652.t1 | MTR_5g094450 | 44.632 | 475 | 229 | 7 | 123 | 592 | 87 | 532 | 7.95e-137 | 409 |
| MS.gene33652.t1 | MTR_4g133660 | 42.576 | 458 | 231 | 6 | 137 | 591 | 114 | 542 | 8.71e-132 | 396 |
| MS.gene33652.t1 | MTR_2g026250 | 46.631 | 371 | 197 | 1 | 223 | 592 | 226 | 596 | 2.64e-125 | 382 |
| MS.gene33652.t1 | MTR_7g057230 | 38.193 | 487 | 259 | 12 | 123 | 591 | 194 | 656 | 8.35e-82 | 270 |
| MS.gene33652.t1 | MTR_7g027190 | 39.175 | 388 | 204 | 6 | 224 | 592 | 299 | 673 | 1.68e-80 | 267 |
| MS.gene33652.t1 | MTR_6g047750 | 39.130 | 391 | 196 | 10 | 223 | 592 | 293 | 662 | 1.35e-74 | 251 |
| MS.gene33652.t1 | MTR_3g065980 | 36.292 | 383 | 213 | 8 | 226 | 592 | 173 | 540 | 8.74e-69 | 233 |
| MS.gene33652.t1 | MTR_7g074650 | 38.525 | 366 | 210 | 6 | 228 | 592 | 441 | 792 | 2.25e-66 | 231 |
| MS.gene33652.t1 | MTR_4g064160 | 32.973 | 370 | 247 | 1 | 223 | 591 | 314 | 683 | 6.74e-64 | 223 |
| MS.gene33652.t1 | MTR_8g442410 | 34.127 | 378 | 230 | 7 | 226 | 592 | 156 | 525 | 2.67e-62 | 215 |
| MS.gene33652.t1 | MTR_7g062120 | 29.904 | 418 | 279 | 3 | 189 | 592 | 323 | 740 | 4.57e-62 | 218 |
| MS.gene33652.t1 | MTR_4g104020 | 32.461 | 382 | 236 | 5 | 224 | 592 | 148 | 520 | 1.23e-60 | 210 |
| MS.gene33652.t1 | MTR_4g064200 | 33.333 | 369 | 241 | 4 | 225 | 591 | 284 | 649 | 2.18e-60 | 212 |
| MS.gene33652.t1 | MTR_4g097080 | 30.952 | 378 | 248 | 6 | 223 | 592 | 131 | 503 | 1.09e-58 | 204 |
| MS.gene33652.t1 | MTR_3g022830 | 29.257 | 417 | 239 | 4 | 226 | 592 | 26 | 436 | 1.27e-57 | 200 |
| MS.gene33652.t1 | MTR_4g064180 | 30.357 | 392 | 268 | 3 | 203 | 589 | 232 | 623 | 2.97e-56 | 200 |
| MS.gene33652.t1 | MTR_4g064120 | 29.337 | 392 | 272 | 3 | 203 | 589 | 232 | 623 | 1.71e-55 | 198 |
| MS.gene33652.t1 | MTR_4g064150 | 28.934 | 394 | 275 | 3 | 203 | 591 | 339 | 732 | 2.21e-55 | 200 |
| MS.gene33652.t1 | MTR_2g097390 | 30.108 | 372 | 253 | 3 | 223 | 591 | 273 | 640 | 2.90e-54 | 195 |
| MS.gene33652.t1 | MTR_2g097310 | 30.108 | 372 | 253 | 3 | 223 | 591 | 270 | 637 | 3.01e-54 | 195 |
| MS.gene33652.t1 | MTR_5g009080 | 28.837 | 430 | 239 | 7 | 224 | 592 | 55 | 478 | 3.26e-54 | 192 |
| MS.gene33652.t1 | MTR_2g097410 | 29.412 | 374 | 257 | 4 | 223 | 591 | 369 | 740 | 3.46e-54 | 196 |
| MS.gene33652.t1 | MTR_2g097350 | 31.016 | 374 | 247 | 5 | 223 | 591 | 272 | 639 | 4.96e-54 | 194 |
| MS.gene33652.t1 | MTR_4g076020 | 35.310 | 371 | 206 | 11 | 228 | 592 | 87 | 429 | 7.77e-54 | 189 |
| MS.gene33652.t1 | MTR_4g102790 | 34.293 | 382 | 224 | 13 | 225 | 591 | 292 | 661 | 3.37e-53 | 193 |
| MS.gene33652.t1 | MTR_5g015490 | 30.491 | 387 | 250 | 9 | 220 | 592 | 109 | 490 | 1.64e-52 | 187 |
| MS.gene33652.t1 | MTR_2g097467 | 28.362 | 409 | 280 | 4 | 187 | 591 | 254 | 653 | 1.78e-52 | 191 |
| MS.gene33652.t1 | MTR_2g097473 | 28.922 | 408 | 280 | 7 | 187 | 591 | 253 | 653 | 1.81e-51 | 187 |
| MS.gene33652.t1 | MTR_2g097463 | 26.535 | 456 | 320 | 5 | 148 | 591 | 202 | 654 | 3.11e-50 | 184 |
| MS.gene33652.t1 | MTR_4g077760 | 31.452 | 372 | 240 | 7 | 226 | 592 | 194 | 555 | 3.03e-49 | 180 |
| MS.gene33652.t1 | MTR_3g072710 | 32.570 | 393 | 228 | 11 | 224 | 591 | 119 | 499 | 5.80e-47 | 172 |
| MS.gene33652.t1 | MTR_1g069725 | 32.275 | 378 | 221 | 12 | 225 | 591 | 109 | 462 | 6.37e-47 | 171 |
| MS.gene33652.t1 | MTR_2g089100 | 29.545 | 396 | 249 | 7 | 223 | 591 | 50 | 442 | 8.68e-47 | 171 |
| MS.gene33652.t1 | MTR_2g099110 | 30.334 | 389 | 241 | 8 | 224 | 592 | 73 | 451 | 2.77e-46 | 169 |
| MS.gene33652.t1 | MTR_1g096030 | 29.975 | 397 | 234 | 12 | 224 | 592 | 79 | 459 | 2.03e-45 | 167 |
| MS.gene33652.t1 | MTR_5g015950 | 26.506 | 415 | 257 | 7 | 223 | 591 | 33 | 445 | 2.26e-41 | 155 |
| MS.gene33652.t1 | MTR_3g053270 | 26.506 | 415 | 257 | 7 | 223 | 591 | 33 | 445 | 2.26e-41 | 155 |
| MS.gene33652.t1 | MTR_2g097380 | 29.934 | 304 | 194 | 3 | 241 | 543 | 240 | 525 | 6.44e-41 | 156 |
| MS.gene33652.t1 | MTR_5g058860 | 30.735 | 449 | 286 | 16 | 161 | 591 | 55 | 496 | 1.11e-40 | 155 |
| MS.gene33652.t1 | MTR_4g095500 | 26.699 | 412 | 258 | 7 | 223 | 591 | 57 | 467 | 6.13e-37 | 144 |
| MS.gene33652.t1 | MTR_2g034250 | 24.737 | 380 | 268 | 7 | 226 | 592 | 211 | 585 | 2.09e-31 | 129 |
| MS.gene33652.t1 | MTR_4g076140 | 32.444 | 225 | 145 | 2 | 224 | 447 | 47 | 265 | 3.14e-30 | 124 |
| MS.gene33652.t1 | MTR_4g076140 | 39.333 | 150 | 90 | 1 | 444 | 592 | 320 | 469 | 9.02e-30 | 123 |
| MS.gene33652.t1 | MTR_2g034280 | 24.934 | 381 | 263 | 8 | 226 | 592 | 204 | 575 | 1.40e-27 | 117 |
| MS.gene33652.t1 | MTR_2g034260 | 24.808 | 391 | 253 | 11 | 226 | 592 | 211 | 584 | 1.82e-27 | 117 |
| MS.gene33652.t1 | MTR_0092s0100 | 27.660 | 376 | 243 | 12 | 226 | 592 | 373 | 728 | 2.46e-25 | 111 |
| MS.gene33652.t1 | MTR_0092s0100 | 27.660 | 376 | 243 | 12 | 226 | 592 | 376 | 731 | 2.71e-25 | 111 |
| MS.gene33652.t1 | MTR_4g026485 | 26.396 | 394 | 266 | 12 | 205 | 592 | 249 | 624 | 1.18e-24 | 108 |
| MS.gene33652.t1 | MTR_8g093070 | 28.125 | 384 | 232 | 15 | 225 | 591 | 139 | 495 | 1.32e-24 | 108 |
| MS.gene33652.t1 | MTR_8g020840 | 24.938 | 401 | 255 | 16 | 220 | 592 | 166 | 548 | 1.34e-23 | 105 |
| MS.gene33652.t1 | MTR_7g109580 | 24.474 | 380 | 263 | 11 | 224 | 592 | 188 | 554 | 9.60e-22 | 99.8 |
| MS.gene33652.t1 | MTR_3g022580 | 32.716 | 162 | 103 | 2 | 431 | 592 | 28 | 183 | 2.27e-19 | 86.7 |
| MS.gene33652.t1 | MTR_1g086970 | 26.389 | 288 | 186 | 11 | 315 | 592 | 207 | 478 | 5.71e-18 | 87.4 |
| MS.gene33652.t1 | MTR_3g022005 | 39.785 | 93 | 56 | 0 | 500 | 592 | 33 | 125 | 2.89e-14 | 70.1 |
| MS.gene33652.t1 | MTR_4g074310 | 31.156 | 199 | 95 | 5 | 265 | 458 | 35 | 196 | 7.23e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33652.t1 | AT1G21450 | 62.023 | 603 | 193 | 14 | 1 | 592 | 16 | 593 | 0.0 | 696 |
| MS.gene33652.t1 | AT5G48150 | 51.429 | 455 | 199 | 6 | 147 | 592 | 49 | 490 | 2.22e-159 | 465 |
| MS.gene33652.t1 | AT5G48150 | 51.429 | 455 | 199 | 6 | 147 | 592 | 49 | 490 | 2.22e-159 | 465 |
| MS.gene33652.t1 | AT5G48150 | 51.429 | 455 | 199 | 6 | 147 | 592 | 49 | 490 | 2.22e-159 | 465 |
| MS.gene33652.t1 | AT5G48150 | 51.429 | 455 | 199 | 6 | 147 | 592 | 49 | 490 | 2.22e-159 | 465 |
| MS.gene33652.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 157 | 526 | 8.71e-146 | 432 |
| MS.gene33652.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 228 | 597 | 4.70e-145 | 432 |
| MS.gene33652.t1 | AT1G50600 | 53.784 | 370 | 171 | 0 | 223 | 592 | 232 | 601 | 8.55e-145 | 432 |
| MS.gene33652.t1 | AT2G04890 | 53.514 | 370 | 165 | 1 | 223 | 592 | 51 | 413 | 4.21e-142 | 418 |
| MS.gene33652.t1 | AT4G17230 | 50.541 | 370 | 183 | 0 | 223 | 592 | 156 | 525 | 1.52e-132 | 398 |
| MS.gene33652.t1 | AT4G17230 | 50.541 | 370 | 183 | 0 | 223 | 592 | 156 | 525 | 1.52e-132 | 398 |
| MS.gene33652.t1 | AT5G52510 | 38.961 | 385 | 210 | 8 | 223 | 592 | 266 | 640 | 4.45e-79 | 262 |
| MS.gene33652.t1 | AT3G03450 | 38.032 | 376 | 210 | 9 | 226 | 592 | 184 | 545 | 1.07e-71 | 240 |
| MS.gene33652.t1 | AT1G66350 | 37.028 | 397 | 223 | 10 | 202 | 592 | 131 | 506 | 2.26e-69 | 233 |
| MS.gene33652.t1 | AT1G07530 | 35.310 | 371 | 238 | 2 | 223 | 591 | 394 | 764 | 1.52e-67 | 234 |
| MS.gene33652.t1 | AT3G54220 | 38.482 | 369 | 207 | 8 | 228 | 591 | 296 | 649 | 1.73e-67 | 231 |
| MS.gene33652.t1 | AT5G17490 | 38.133 | 375 | 209 | 10 | 224 | 592 | 159 | 516 | 1.46e-66 | 226 |
| MS.gene33652.t1 | AT1G14920 | 35.389 | 373 | 219 | 9 | 226 | 592 | 173 | 529 | 2.32e-62 | 215 |
| MS.gene33652.t1 | AT5G59450 | 30.982 | 397 | 258 | 5 | 203 | 592 | 211 | 598 | 2.77e-62 | 216 |
| MS.gene33652.t1 | AT2G29060 | 29.581 | 453 | 300 | 6 | 148 | 591 | 212 | 654 | 3.18e-59 | 209 |
| MS.gene33652.t1 | AT5G66770 | 35.389 | 373 | 226 | 8 | 226 | 592 | 221 | 584 | 4.18e-59 | 207 |
| MS.gene33652.t1 | AT2G01570 | 35.092 | 379 | 212 | 11 | 226 | 592 | 225 | 581 | 4.25e-59 | 207 |
| MS.gene33652.t1 | AT2G29060 | 29.581 | 453 | 300 | 6 | 148 | 591 | 249 | 691 | 4.78e-59 | 209 |
| MS.gene33652.t1 | AT3G46600 | 30.189 | 371 | 257 | 2 | 223 | 592 | 2 | 371 | 7.25e-56 | 193 |
| MS.gene33652.t1 | AT2G37650 | 29.919 | 371 | 257 | 2 | 223 | 592 | 333 | 701 | 8.96e-56 | 201 |
| MS.gene33652.t1 | AT2G37650 | 29.919 | 371 | 257 | 2 | 223 | 592 | 345 | 713 | 9.56e-56 | 201 |
| MS.gene33652.t1 | AT5G41920 | 32.235 | 425 | 251 | 11 | 175 | 592 | 6 | 400 | 1.81e-55 | 193 |
| MS.gene33652.t1 | AT3G46600 | 29.716 | 387 | 270 | 2 | 207 | 592 | 194 | 579 | 4.96e-55 | 196 |
| MS.gene33652.t1 | AT3G46600 | 29.716 | 387 | 270 | 2 | 207 | 592 | 162 | 547 | 7.29e-55 | 195 |
| MS.gene33652.t1 | AT2G29065 | 30.952 | 378 | 252 | 6 | 223 | 591 | 250 | 627 | 4.61e-54 | 194 |
| MS.gene33652.t1 | AT4G37650 | 29.371 | 429 | 259 | 12 | 191 | 592 | 118 | 529 | 9.50e-53 | 189 |
| MS.gene33652.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 152 | 528 | 1.07e-51 | 186 |
| MS.gene33652.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 152 | 528 | 1.07e-51 | 186 |
| MS.gene33652.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 316 | 692 | 2.66e-51 | 188 |
| MS.gene33652.t1 | AT1G07520 | 29.894 | 378 | 255 | 7 | 223 | 591 | 317 | 693 | 3.09e-51 | 187 |
| MS.gene33652.t1 | AT3G50650 | 29.536 | 474 | 281 | 11 | 157 | 592 | 84 | 542 | 9.95e-50 | 181 |
| MS.gene33652.t1 | AT1G63100 | 32.565 | 347 | 214 | 7 | 225 | 563 | 252 | 586 | 1.47e-43 | 165 |
| MS.gene33652.t1 | AT1G63100 | 32.565 | 347 | 214 | 7 | 225 | 563 | 277 | 611 | 1.65e-43 | 165 |
| MS.gene33652.t1 | AT1G55580 | 27.845 | 413 | 246 | 9 | 223 | 592 | 42 | 445 | 1.11e-41 | 156 |
| MS.gene33652.t1 | AT4G08250 | 29.211 | 380 | 248 | 9 | 224 | 591 | 106 | 476 | 3.03e-40 | 153 |
| MS.gene33652.t1 | AT3G49950 | 26.410 | 390 | 256 | 11 | 223 | 591 | 28 | 407 | 5.83e-36 | 139 |
| MS.gene33652.t1 | AT1G50420 | 35.714 | 210 | 126 | 2 | 224 | 430 | 56 | 259 | 1.08e-33 | 134 |
| MS.gene33652.t1 | AT1G50420 | 38.411 | 151 | 90 | 2 | 444 | 592 | 330 | 479 | 5.83e-27 | 115 |
| MS.gene33652.t1 | AT3G13840 | 26.425 | 386 | 253 | 11 | 220 | 592 | 143 | 510 | 5.03e-25 | 109 |
| MS.gene33652.t1 | AT2G45160 | 26.774 | 310 | 199 | 9 | 295 | 592 | 346 | 639 | 3.41e-20 | 95.1 |
| MS.gene33652.t1 | AT3G60630 | 25.000 | 348 | 232 | 10 | 258 | 592 | 291 | 622 | 5.29e-20 | 94.4 |
| MS.gene33652.t1 | AT5G67411 | 33.668 | 199 | 119 | 7 | 342 | 529 | 2 | 198 | 6.75e-18 | 82.8 |
| MS.gene33652.t1 | AT4G00150 | 23.989 | 371 | 246 | 13 | 230 | 592 | 212 | 554 | 6.18e-17 | 84.7 |
Find 151 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAATCTGATTCAAAAT+TGG | 0.173475 | 1.1:+14978593 | None:intergenic |
| CAGGCAGTTGGTTTCAATTC+AGG | 0.191357 | 1.1:-14978205 | MS.gene33652:CDS |
| TCCACAACTGTTACAAGTTT+TGG | 0.228798 | 1.1:+14977586 | None:intergenic |
| TAGAAGCAAGTGTTTGTATC+AGG | 0.258688 | 1.1:+14977914 | None:intergenic |
| CTGATAGAACCGTCTAGTTC+TGG | 0.275886 | 1.1:-14978750 | MS.gene33652:CDS |
| TGCCAAGCTATACTCGTTAA+AGG | 0.281634 | 1.1:-14978901 | MS.gene33652:CDS |
| TGATACAAACACTTGCTTCT+AGG | 0.282847 | 1.1:-14977912 | MS.gene33652:CDS |
| AACAGATCGTTGCACGGATT+CGG | 0.283044 | 1.1:+14977846 | None:intergenic |
| GGAAGGACTTGCGGCTCGTT+TGG | 0.307317 | 1.1:-14978148 | MS.gene33652:CDS |
| ACAGATCGTTGCACGGATTC+GGG | 0.312714 | 1.1:+14977847 | None:intergenic |
| GCGATTGAAAATACAAGAAT+TGG | 0.316595 | 1.1:-14978529 | MS.gene33652:CDS |
| CCGTCTAGTTCTGGGATATC+TGG | 0.321129 | 1.1:-14978741 | MS.gene33652:CDS |
| GCGGCTCGTTTGGCTTCATC+GGG | 0.324337 | 1.1:-14978138 | MS.gene33652:CDS |
| TCTTTCACATTTGTGCTCAT+TGG | 0.325783 | 1.1:+14977310 | None:intergenic |
| AGCTAATTCAGGAGGTTCTA+TGG | 0.328878 | 1.1:-14978676 | MS.gene33652:CDS |
| TGATATTTCTTTGGTGCTAC+TGG | 0.337052 | 1.1:+14978326 | None:intergenic |
| GGTATGAAGTTGCCGGAAAA+TGG | 0.337471 | 1.1:-14977369 | MS.gene33652:CDS |
| TGCGGCTCGTTTGGCTTCAT+CGG | 0.352118 | 1.1:-14978139 | MS.gene33652:CDS |
| TTATAGGCTTCAACAAATCT+TGG | 0.356310 | 1.1:+14977529 | None:intergenic |
| CACAGCAGAGTAGTAATTAT+AGG | 0.363820 | 1.1:+14977513 | None:intergenic |
| GTACAAGATAGTAGAGGAAA+TGG | 0.378806 | 1.1:-14977251 | MS.gene33652:CDS |
| TTTGGATTTATTGCTGCTAA+TGG | 0.383067 | 1.1:-14978018 | MS.gene33652:CDS |
| TACATGCTTCTATGCTTATC+AGG | 0.384672 | 1.1:+14978837 | None:intergenic |
| CCTGATTGCTTTGAATTTGA+CGG | 0.401860 | 1.1:-14978558 | MS.gene33652:CDS |
| CCGTCAAATTCAAAGCAATC+AGG | 0.405445 | 1.1:+14978558 | None:intergenic |
| ATGGAGGGCAAGGATGAAAA+TGG | 0.406129 | 1.1:-14977350 | MS.gene33652:CDS |
| CACTCTTCCGAGAGAGAGCC+AGG | 0.410423 | 1.1:-14977473 | MS.gene33652:CDS |
| TTCAATTCAGGGAGAACCTT+CGG | 0.411593 | 1.1:-14978193 | MS.gene33652:CDS |
| ACGATGAGGAAAACATGTTT+AGG | 0.418481 | 1.1:-14978467 | MS.gene33652:CDS |
| ACGAAACATAAGTTTCAAAC+TGG | 0.420279 | 1.1:+14978643 | None:intergenic |
| AAGCAATTAGAGAACTCATT+AGG | 0.421160 | 1.1:-14977288 | MS.gene33652:CDS |
| CTCACATAAGGTGGCTTCCC+TGG | 0.421499 | 1.1:+14977889 | None:intergenic |
| GGACGACAGTTGAGCATTGA+TGG | 0.424496 | 1.1:+14977721 | None:intergenic |
| AGGCAGTTGGTTTCAATTCA+GGG | 0.425383 | 1.1:-14978204 | MS.gene33652:CDS |
| ATAGAACGGTATGAAGTTGC+CGG | 0.427124 | 1.1:-14977376 | MS.gene33652:CDS |
| ATTCATAGAGTAATTGCTTC+GGG | 0.428091 | 1.1:+14978286 | None:intergenic |
| TACCAGCTCAGAGCTAATTC+AGG | 0.431218 | 1.1:-14978687 | MS.gene33652:CDS |
| TACAAGATAGTAGAGGAAAT+GGG | 0.434064 | 1.1:-14977250 | MS.gene33652:CDS |
| TCAACAAATCTTGGGAGAAA+GGG | 0.445090 | 1.1:+14977538 | None:intergenic |
| GTTCACCACAAGAGCTTCCC+CGG | 0.452377 | 1.1:+14977699 | None:intergenic |
| TACCGTTGATACACTTTCAT+CGG | 0.452419 | 1.1:+14977651 | None:intergenic |
| ACCGTTGATACACTTTCATC+GGG | 0.454201 | 1.1:+14977652 | None:intergenic |
| GGGTTATATATTGACTTCCT+TGG | 0.454975 | 1.1:+14977935 | None:intergenic |
| TATAGGCTTCAACAAATCTT+GGG | 0.456724 | 1.1:+14977530 | None:intergenic |
| TTCAACAAATCTTGGGAGAA+AGG | 0.466115 | 1.1:+14977537 | None:intergenic |
| TTTCAACATTCAACCTATCC+TGG | 0.466892 | 1.1:+14977455 | None:intergenic |
| TCTGAGGACAAAGATTCCTT+TGG | 0.467050 | 1.1:+14978366 | None:intergenic |
| TGATAGAACCGTCTAGTTCT+GGG | 0.467216 | 1.1:-14978749 | MS.gene33652:CDS |
| TCAATGCTCAACTGTCGTCC+CGG | 0.473427 | 1.1:-14977718 | MS.gene33652:CDS |
| CAATGCTCAACTGTCGTCCC+GGG | 0.477152 | 1.1:-14977717 | MS.gene33652:CDS |
| CATTCATAGAGTAATTGCTT+CGG | 0.479741 | 1.1:+14978285 | None:intergenic |
| GCTTATCAGGAGCAAAATCA+TGG | 0.483645 | 1.1:+14978850 | None:intergenic |
| TCTTAACCATGCGGAGAAGC+TGG | 0.488691 | 1.1:+14977617 | None:intergenic |
| GTTGGAGGCCTAAGTATCAT+AGG | 0.491231 | 1.1:-14977826 | MS.gene33652:CDS |
| CAGCTATGATCGATGATCTC+AGG | 0.491997 | 1.1:-14978224 | MS.gene33652:CDS |
| GCCAAGCTATACTCGTTAAA+GGG | 0.492765 | 1.1:-14978900 | MS.gene33652:CDS |
| TGAAAATACAAGAATTGGAG+AGG | 0.493157 | 1.1:-14978524 | MS.gene33652:CDS |
| TCGTCCCGGGGAAGCTCTTG+TGG | 0.495157 | 1.1:-14977704 | MS.gene33652:CDS |
| GTCTTTGACCTATGATACTT+AGG | 0.498050 | 1.1:+14977818 | None:intergenic |
| CGACTTGTTCTGAATGGGAT+TGG | 0.499359 | 1.1:+14978401 | None:intergenic |
| AAATCATGGGAGGACAAGCC+AGG | 0.501458 | 1.1:+14978864 | None:intergenic |
| TTGGCACACTCAGCAAAGTC+AGG | 0.501614 | 1.1:+14978420 | None:intergenic |
| TGTCATTGCGTGTGAGGGCG+AGG | 0.504713 | 1.1:-14977404 | MS.gene33652:CDS |
| CCACCTTATGTGAGATTGAC+CGG | 0.507424 | 1.1:-14977880 | MS.gene33652:CDS |
| GAGTTGGCTGATGCGTCGTA+TGG | 0.511052 | 1.1:-14978927 | MS.gene33652:CDS |
| CAAACACTTGCTTCTAGGCC+AGG | 0.511442 | 1.1:-14977907 | MS.gene33652:CDS |
| TCCCTTTAACGAGTATAGCT+TGG | 0.513672 | 1.1:+14978899 | None:intergenic |
| ACAAGATAGTAGAGGAAATG+GGG | 0.518024 | 1.1:-14977249 | MS.gene33652:CDS |
| TGATGCGACTTGTTCTGAAT+GGG | 0.520418 | 1.1:+14978396 | None:intergenic |
| AACCTATCCTGGCTCTCTCT+CGG | 0.522464 | 1.1:+14977466 | None:intergenic |
| TCCAAAACTTGTAACAGTTG+TGG | 0.523299 | 1.1:-14977587 | MS.gene33652:CDS |
| ATTGATTATATCTCCAGAGT+TGG | 0.524249 | 1.1:-14978943 | MS.gene33652:CDS |
| CATCGGGCATGTGATGAAGC+TGG | 0.525795 | 1.1:+14977668 | None:intergenic |
| GGATAGAATTGCAGCCTACA+TGG | 0.528367 | 1.1:-14978172 | MS.gene33652:CDS |
| ACACCGGTCAATCTCACATA+AGG | 0.532296 | 1.1:+14977877 | None:intergenic |
| AAACTTATGTTTCGTCTACA+AGG | 0.534213 | 1.1:-14978635 | MS.gene33652:CDS |
| TTATAAAGCTTTGAAATGCA+AGG | 0.539721 | 1.1:-14978106 | MS.gene33652:CDS |
| GGCTATTAAAGATGATAAGA+AGG | 0.541700 | 1.1:-14977983 | MS.gene33652:CDS |
| AAATATCACAAAACTTTCCT+CGG | 0.543588 | 1.1:-14978311 | MS.gene33652:CDS |
| GCTACGGCACGAAATTCAAA+TGG | 0.544112 | 1.1:+14977766 | None:intergenic |
| ATGATGCGACTTGTTCTGAA+TGG | 0.544379 | 1.1:+14978395 | None:intergenic |
| GTTTAGGACTGTTCAGAGCA+TGG | 0.548249 | 1.1:-14978451 | MS.gene33652:CDS |
| GAATCCGTGCAACGATCTGT+TGG | 0.549569 | 1.1:-14977844 | MS.gene33652:CDS |
| AGCAATGCAGATACTATTCG+AGG | 0.550536 | 1.1:-14978058 | MS.gene33652:CDS |
| GTTCTTCTGTAGGTGAATCA+AGG | 0.552374 | 1.1:+14978772 | None:intergenic |
| AGGGCAAGGATGAAAATGGC+TGG | 0.554676 | 1.1:-14977346 | MS.gene33652:CDS |
| AGAAGCAAGTGTTTGTATCA+GGG | 0.558440 | 1.1:+14977915 | None:intergenic |
| GGAAATTCTGTTCATGCTGA+TGG | 0.558581 | 1.1:-14978720 | MS.gene33652:CDS |
| GAATGTTGAAAGGCAATGCT+TGG | 0.559198 | 1.1:-14977443 | MS.gene33652:CDS |
| TACGACGCATCAGCCAACTC+TGG | 0.562234 | 1.1:+14978930 | None:intergenic |
| AAGGGAGCCGATGTTACACC+TGG | 0.562237 | 1.1:-14978882 | MS.gene33652:CDS |
| CTCCTGAATTAGCTCTGAGC+TGG | 0.562844 | 1.1:+14978685 | None:intergenic |
| GATCGATGATCTCAGGCAGT+TGG | 0.564311 | 1.1:-14978217 | MS.gene33652:CDS |
| AATTTCGTGCCGTAGCATCA+AGG | 0.565456 | 1.1:-14977759 | MS.gene33652:CDS |
| ACTTGATTGTTGCTTCAGCA+TGG | 0.566287 | 1.1:-14977198 | MS.gene33652:CDS |
| GAATTGGAGAGGGCATTGCT+TGG | 0.568349 | 1.1:-14978513 | MS.gene33652:CDS |
| TTGCCGGAAAATGGAGGGCA+AGG | 0.570168 | 1.1:-14977360 | MS.gene33652:CDS |
| AGTTGGCTGATGCGTCGTAT+GGG | 0.571217 | 1.1:-14978926 | MS.gene33652:CDS |
| AATTGAAGACCTTGATGCTA+CGG | 0.573876 | 1.1:+14977750 | None:intergenic |
| GGTTCTATCAGTTCTTCTGT+AGG | 0.574264 | 1.1:+14978762 | None:intergenic |
| TCCGTGCAACGATCTGTTGG+AGG | 0.575063 | 1.1:-14977841 | MS.gene33652:CDS |
| CAACAAATCTTGGGAGAAAG+GGG | 0.584291 | 1.1:+14977539 | None:intergenic |
| GAAAAGCTAGCAGAAGTACT+CGG | 0.588604 | 1.1:-14977793 | MS.gene33652:CDS |
| ATGAAGTTGCCGGAAAATGG+AGG | 0.588856 | 1.1:-14977366 | MS.gene33652:CDS |
| AGTAATTGCTTCGGGGTCCG+AGG | 0.588857 | 1.1:+14978294 | None:intergenic |
| CGTCAAATTCAAAGCAATCA+GGG | 0.590617 | 1.1:+14978559 | None:intergenic |
| CTGGCTCTCTCTCGGAAGAG+TGG | 0.590772 | 1.1:+14977474 | None:intergenic |
| GTCAATGTCATTGCGTGTGA+GGG | 0.592691 | 1.1:-14977409 | MS.gene33652:CDS |
| GCCTCCAACAGATCGTTGCA+CGG | 0.595803 | 1.1:+14977840 | None:intergenic |
| GCCCGATGAAAGTGTATCAA+CGG | 0.597244 | 1.1:-14977653 | MS.gene33652:CDS |
| TAAATCCAAACTTAAAACAT+GGG | 0.600368 | 1.1:+14978031 | None:intergenic |
| CAAGATAGTAGAGGAAATGG+GGG | 0.603750 | 1.1:-14977248 | MS.gene33652:CDS |
| ATAAATCCAAACTTAAAACA+TGG | 0.605905 | 1.1:+14978030 | None:intergenic |
| ACGAGACCAGCTTCTCCGCA+TGG | 0.606476 | 1.1:-14977623 | MS.gene33652:CDS |
| CCAGATATCCCAGAACTAGA+CGG | 0.610505 | 1.1:+14978741 | None:intergenic |
| TTGAAAGGCAATGCTTGGCG+AGG | 0.610581 | 1.1:-14977438 | MS.gene33652:CDS |
| AGGATAGGTTGAATGTTGAA+AGG | 0.611055 | 1.1:-14977453 | MS.gene33652:CDS |
| TGTGCTAGCGCACTTTCAGA+AGG | 0.613130 | 1.1:-14978264 | MS.gene33652:CDS |
| AAACACTTGCTTCTAGGCCA+GGG | 0.617893 | 1.1:-14977906 | MS.gene33652:CDS |
| GCTACTAAGATTTGAATCTG+AGG | 0.622598 | 1.1:+14978350 | None:intergenic |
| TAGGCTGCAATTCTATCCGA+AGG | 0.623160 | 1.1:+14978177 | None:intergenic |
| GTCGCATCATGACTCGCCAA+AGG | 0.623457 | 1.1:-14978382 | MS.gene33652:CDS |
| GAAAATACAAGAATTGGAGA+GGG | 0.625619 | 1.1:-14978523 | MS.gene33652:CDS |
| CCGGTCAATCTCACATAAGG+TGG | 0.626350 | 1.1:+14977880 | None:intergenic |
| ATTGCAGCCTACATGGTGGA+AGG | 0.627921 | 1.1:-14978165 | MS.gene33652:CDS |
| TGAAAGGCAATGCTTGGCGA+GGG | 0.630756 | 1.1:-14977437 | MS.gene33652:CDS |
| TGTCAATGTCATTGCGTGTG+AGG | 0.632541 | 1.1:-14977410 | MS.gene33652:CDS |
| TTCCGAGAGAGAGCCAGGAT+AGG | 0.634206 | 1.1:-14977468 | MS.gene33652:CDS |
| CTTATCAGGAGCAAAATCAT+GGG | 0.634286 | 1.1:+14978851 | None:intergenic |
| TGAAGTTGCCGGAAAATGGA+GGG | 0.635160 | 1.1:-14977365 | MS.gene33652:CDS |
| GCTGCTAGACGATCAGAAGA+CGG | 0.639186 | 1.1:+14978078 | None:intergenic |
| CTACATGGTGGAAGGACTTG+CGG | 0.640770 | 1.1:-14978157 | MS.gene33652:CDS |
| CGCAAGTCCTTCCACCATGT+AGG | 0.643612 | 1.1:+14978158 | None:intergenic |
| GGACAAGCCAGGTGTAACAT+CGG | 0.651711 | 1.1:+14978875 | None:intergenic |
| TTCACCACAAGAGCTTCCCC+GGG | 0.654911 | 1.1:+14977700 | None:intergenic |
| TGCTAATGGTGCTATCTCTG+AGG | 0.658374 | 1.1:-14978004 | MS.gene33652:CDS |
| AACAAATCTTGGGAGAAAGG+GGG | 0.658411 | 1.1:+14977540 | None:intergenic |
| ATCAGGAGCAAAATCATGGG+AGG | 0.665372 | 1.1:+14978854 | None:intergenic |
| CAGCTCAGAGCTAATTCAGG+AGG | 0.666948 | 1.1:-14978684 | MS.gene33652:CDS |
| TTCATAGAGTAATTGCTTCG+GGG | 0.668763 | 1.1:+14978287 | None:intergenic |
| AATGCTCAACTGTCGTCCCG+GGG | 0.671564 | 1.1:-14977716 | MS.gene33652:CDS |
| GATTAAGGCTCTTAACCATG+CGG | 0.671983 | 1.1:+14977608 | None:intergenic |
| CGGCTCGTTTGGCTTCATCG+GGG | 0.673846 | 1.1:-14978137 | MS.gene33652:CDS |
| GAGATCATCGATCATAGCTG+AGG | 0.677523 | 1.1:+14978227 | None:intergenic |
| TGACAAGTACAAGATAGTAG+AGG | 0.679823 | 1.1:-14977257 | MS.gene33652:CDS |
| TAGAATTGCAGCCTACATGG+TGG | 0.682524 | 1.1:-14978169 | MS.gene33652:CDS |
| AGGGCGAGGATAGAATAGAA+CGG | 0.705742 | 1.1:-14977390 | MS.gene33652:CDS |
| AAGATAGTAGAGGAAATGGG+GGG | 0.714830 | 1.1:-14977247 | MS.gene33652:CDS |
| CGATGAGTGTGATGACGATG+AGG | 0.725180 | 1.1:-14978481 | MS.gene33652:CDS |
| GGATTCGGGATCATCAACAC+CGG | 0.740769 | 1.1:+14977861 | None:intergenic |
| GCTAGACGATCAGAAGACGG+AGG | 0.750067 | 1.1:+14978081 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATCCAAACTTAAAACA+TGG | + | chr1.1:14978113-14978132 | None:intergenic | 20.0% |
| !! | TAAATCCAAACTTAAAACAT+GGG | + | chr1.1:14978112-14978131 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGTGATATTTCTT+TGG | + | chr1.1:14977826-14977845 | None:intergenic | 20.0% |
| ! | AAATATCACAAAACTTTCCT+CGG | - | chr1.1:14977829-14977848 | MS.gene33652:CDS | 25.0% |
| ! | CAAGAAATCTGATTCAAAAT+TGG | + | chr1.1:14977550-14977569 | None:intergenic | 25.0% |
| !! | CAATTTTGAATCAGATTTCT+TGG | - | chr1.1:14977548-14977567 | MS.gene33652:CDS | 25.0% |
| !!! | ATAGATTTTGATATCAACCA+AGG | - | chr1.1:14978188-14978207 | MS.gene33652:CDS | 25.0% |
| !!! | TTATAAAGCTTTGAAATGCA+AGG | - | chr1.1:14978034-14978053 | MS.gene33652:CDS | 25.0% |
| AAACTTATGTTTCGTCTACA+AGG | - | chr1.1:14977505-14977524 | MS.gene33652:CDS | 30.0% | |
| AAGCAATTAGAGAACTCATT+AGG | - | chr1.1:14978852-14978871 | MS.gene33652:CDS | 30.0% | |
| ACGAAACATAAGTTTCAAAC+TGG | + | chr1.1:14977500-14977519 | None:intergenic | 30.0% | |
| ATTCATAGAGTAATTGCTTC+GGG | + | chr1.1:14977857-14977876 | None:intergenic | 30.0% | |
| ATTGATTATATCTCCAGAGT+TGG | - | chr1.1:14977197-14977216 | MS.gene33652:CDS | 30.0% | |
| CATTCATAGAGTAATTGCTT+CGG | + | chr1.1:14977858-14977877 | None:intergenic | 30.0% | |
| GAAAATACAAGAATTGGAGA+GGG | - | chr1.1:14977617-14977636 | MS.gene33652:CDS | 30.0% | |
| GCGATTGAAAATACAAGAAT+TGG | - | chr1.1:14977611-14977630 | MS.gene33652:CDS | 30.0% | |
| GGCTATTAAAGATGATAAGA+AGG | - | chr1.1:14978157-14978176 | MS.gene33652:CDS | 30.0% | |
| TACAAGATAGTAGAGGAAAT+GGG | - | chr1.1:14978890-14978909 | MS.gene33652:CDS | 30.0% | |
| TATAGGCTTCAACAAATCTT+GGG | + | chr1.1:14978613-14978632 | None:intergenic | 30.0% | |
| TGAAAATACAAGAATTGGAG+AGG | - | chr1.1:14977616-14977635 | MS.gene33652:CDS | 30.0% | |
| TTATAGGCTTCAACAAATCT+TGG | + | chr1.1:14978614-14978633 | None:intergenic | 30.0% | |
| TTTGGATTTATTGCTGCTAA+TGG | - | chr1.1:14978122-14978141 | MS.gene33652:CDS | 30.0% | |
| !!! | CTGTTACAAGTTTTGGATTA+AGG | + | chr1.1:14978550-14978569 | None:intergenic | 30.0% |
| AATTGAAGACCTTGATGCTA+CGG | + | chr1.1:14978393-14978412 | None:intergenic | 35.0% | |
| ACAAGATAGTAGAGGAAATG+GGG | - | chr1.1:14978891-14978910 | MS.gene33652:CDS | 35.0% | |
| ACGATGAGGAAAACATGTTT+AGG | - | chr1.1:14977673-14977692 | MS.gene33652:CDS | 35.0% | |
| AGAAGCAAGTGTTTGTATCA+GGG | + | chr1.1:14978228-14978247 | None:intergenic | 35.0% | |
| CACAGCAGAGTAGTAATTAT+AGG | + | chr1.1:14978630-14978649 | None:intergenic | 35.0% | |
| CGTCAAATTCAAAGCAATCA+GGG | + | chr1.1:14977584-14977603 | None:intergenic | 35.0% | |
| CTTATCAGGAGCAAAATCAT+GGG | + | chr1.1:14977292-14977311 | None:intergenic | 35.0% | |
| GCTACTAAGATTTGAATCTG+AGG | + | chr1.1:14977793-14977812 | None:intergenic | 35.0% | |
| GTACAAGATAGTAGAGGAAA+TGG | - | chr1.1:14978889-14978908 | MS.gene33652:CDS | 35.0% | |
| GTCTTTGACCTATGATACTT+AGG | + | chr1.1:14978325-14978344 | None:intergenic | 35.0% | |
| TACATGCTTCTATGCTTATC+AGG | + | chr1.1:14977306-14977325 | None:intergenic | 35.0% | |
| TACCGTTGATACACTTTCAT+CGG | + | chr1.1:14978492-14978511 | None:intergenic | 35.0% | |
| TAGAAGCAAGTGTTTGTATC+AGG | + | chr1.1:14978229-14978248 | None:intergenic | 35.0% | |
| TCAACAAATCTTGGGAGAAA+GGG | + | chr1.1:14978605-14978624 | None:intergenic | 35.0% | |
| TCCAAAACTTGTAACAGTTG+TGG | - | chr1.1:14978553-14978572 | MS.gene33652:CDS | 35.0% | |
| TCTTTCACATTTGTGCTCAT+TGG | + | chr1.1:14978833-14978852 | None:intergenic | 35.0% | |
| TGACAAGTACAAGATAGTAG+AGG | - | chr1.1:14978883-14978902 | MS.gene33652:CDS | 35.0% | |
| TGATACAAACACTTGCTTCT+AGG | - | chr1.1:14978228-14978247 | MS.gene33652:CDS | 35.0% | |
| TTCAACAAATCTTGGGAGAA+AGG | + | chr1.1:14978606-14978625 | None:intergenic | 35.0% | |
| TTCATAGAGTAATTGCTTCG+GGG | + | chr1.1:14977856-14977875 | None:intergenic | 35.0% | |
| TTTCAACATTCAACCTATCC+TGG | + | chr1.1:14978688-14978707 | None:intergenic | 35.0% | |
| ! | AGGATAGGTTGAATGTTGAA+AGG | - | chr1.1:14978687-14978706 | MS.gene33652:CDS | 35.0% |
| ! | CCTGATTGCTTTGAATTTGA+CGG | - | chr1.1:14977582-14977601 | MS.gene33652:CDS | 35.0% |
| ! | TCCACAACTGTTACAAGTTT+TGG | + | chr1.1:14978557-14978576 | None:intergenic | 35.0% |
| !! | GGGTTATATATTGACTTCCT+TGG | + | chr1.1:14978208-14978227 | None:intergenic | 35.0% |
| !! | TGATATTTCTTTGGTGCTAC+TGG | + | chr1.1:14977817-14977836 | None:intergenic | 35.0% |
| AACAAATCTTGGGAGAAAGG+GGG | + | chr1.1:14978603-14978622 | None:intergenic | 40.0% | |
| AAGATAGTAGAGGAAATGGG+GGG | - | chr1.1:14978893-14978912 | MS.gene33652:CDS | 40.0% | |
| ACCGTTGATACACTTTCATC+GGG | + | chr1.1:14978491-14978510 | None:intergenic | 40.0% | |
| AGCAATGCAGATACTATTCG+AGG | - | chr1.1:14978082-14978101 | MS.gene33652:CDS | 40.0% | |
| AGCTAATTCAGGAGGTTCTA+TGG | - | chr1.1:14977464-14977483 | MS.gene33652:CDS | 40.0% | |
| ATAGAACGGTATGAAGTTGC+CGG | - | chr1.1:14978764-14978783 | MS.gene33652:CDS | 40.0% | |
| CAACAAATCTTGGGAGAAAG+GGG | + | chr1.1:14978604-14978623 | None:intergenic | 40.0% | |
| CAAGATAGTAGAGGAAATGG+GGG | - | chr1.1:14978892-14978911 | MS.gene33652:CDS | 40.0% | |
| CCGTCAAATTCAAAGCAATC+AGG | + | chr1.1:14977585-14977604 | None:intergenic | 40.0% | |
| GAATGTTGAAAGGCAATGCT+TGG | - | chr1.1:14978697-14978716 | MS.gene33652:CDS | 40.0% | |
| GATTAAGGCTCTTAACCATG+CGG | + | chr1.1:14978535-14978554 | None:intergenic | 40.0% | |
| GCCAAGCTATACTCGTTAAA+GGG | - | chr1.1:14977240-14977259 | MS.gene33652:CDS | 40.0% | |
| GCTTATCAGGAGCAAAATCA+TGG | + | chr1.1:14977293-14977312 | None:intergenic | 40.0% | |
| GGAAATTCTGTTCATGCTGA+TGG | - | chr1.1:14977420-14977439 | MS.gene33652:CDS | 40.0% | |
| GGTTCTATCAGTTCTTCTGT+AGG | + | chr1.1:14977381-14977400 | None:intergenic | 40.0% | |
| GTTCTTCTGTAGGTGAATCA+AGG | + | chr1.1:14977371-14977390 | None:intergenic | 40.0% | |
| TCCCTTTAACGAGTATAGCT+TGG | + | chr1.1:14977244-14977263 | None:intergenic | 40.0% | |
| TCTGAGGACAAAGATTCCTT+TGG | + | chr1.1:14977777-14977796 | None:intergenic | 40.0% | |
| TGCCAAGCTATACTCGTTAA+AGG | - | chr1.1:14977239-14977258 | MS.gene33652:CDS | 40.0% | |
| TTCAATTCAGGGAGAACCTT+CGG | - | chr1.1:14977947-14977966 | MS.gene33652:CDS | 40.0% | |
| ! | AAATGGGGGGACTTCATTTT+GGG | - | chr1.1:14978906-14978925 | MS.gene33652:CDS | 40.0% |
| ! | ACTTGATTGTTGCTTCAGCA+TGG | - | chr1.1:14978942-14978961 | MS.gene33652:CDS | 40.0% |
| ! | AGGCAGTTGGTTTCAATTCA+GGG | - | chr1.1:14977936-14977955 | MS.gene33652:CDS | 40.0% |
| ! | ATGATGCGACTTGTTCTGAA+TGG | + | chr1.1:14977748-14977767 | None:intergenic | 40.0% |
| ! | TGATGCGACTTGTTCTGAAT+GGG | + | chr1.1:14977747-14977766 | None:intergenic | 40.0% |
| !! | GAAAAGCTAGCAGAAGTACT+CGG | - | chr1.1:14978347-14978366 | MS.gene33652:CDS | 40.0% |
| !! | TGATAGAACCGTCTAGTTCT+GGG | - | chr1.1:14977391-14977410 | MS.gene33652:CDS | 40.0% |
| !!! | GTGTGCCCATGTTTTAAGTT+TGG | - | chr1.1:14978104-14978123 | MS.gene33652:CDS | 40.0% |
| AAACACTTGCTTCTAGGCCA+GGG | - | chr1.1:14978234-14978253 | MS.gene33652:CDS | 45.0% | |
| AACAGATCGTTGCACGGATT+CGG | + | chr1.1:14978297-14978316 | None:intergenic | 45.0% | |
| AATTTCGTGCCGTAGCATCA+AGG | - | chr1.1:14978381-14978400 | MS.gene33652:CDS | 45.0% | |
| ACACCGGTCAATCTCACATA+AGG | + | chr1.1:14978266-14978285 | None:intergenic | 45.0% | |
| AGGGCGAGGATAGAATAGAA+CGG | - | chr1.1:14978750-14978769 | MS.gene33652:CDS | 45.0% | |
| ATCAGGAGCAAAATCATGGG+AGG | + | chr1.1:14977289-14977308 | None:intergenic | 45.0% | |
| ATGAAGTTGCCGGAAAATGG+AGG | - | chr1.1:14978774-14978793 | MS.gene33652:CDS | 45.0% | |
| ATGGAGGGCAAGGATGAAAA+TGG | - | chr1.1:14978790-14978809 | MS.gene33652:CDS | 45.0% | |
| CAGCTATGATCGATGATCTC+AGG | - | chr1.1:14977916-14977935 | MS.gene33652:CDS | 45.0% | |
| CCACCTTATGTGAGATTGAC+CGG | - | chr1.1:14978260-14978279 | MS.gene33652:CDS | 45.0% | |
| CCAGATATCCCAGAACTAGA+CGG | + | chr1.1:14977402-14977421 | None:intergenic | 45.0% | |
| GAGATCATCGATCATAGCTG+AGG | + | chr1.1:14977916-14977935 | None:intergenic | 45.0% | |
| GCTACGGCACGAAATTCAAA+TGG | + | chr1.1:14978377-14978396 | None:intergenic | 45.0% | |
| GGATAGAATTGCAGCCTACA+TGG | - | chr1.1:14977968-14977987 | MS.gene33652:CDS | 45.0% | |
| GGTATGAAGTTGCCGGAAAA+TGG | - | chr1.1:14978771-14978790 | MS.gene33652:CDS | 45.0% | |
| GTCAATGTCATTGCGTGTGA+GGG | - | chr1.1:14978731-14978750 | MS.gene33652:CDS | 45.0% | |
| GTTGGAGGCCTAAGTATCAT+AGG | - | chr1.1:14978314-14978333 | MS.gene33652:CDS | 45.0% | |
| TACCAGCTCAGAGCTAATTC+AGG | - | chr1.1:14977453-14977472 | MS.gene33652:CDS | 45.0% | |
| TAGAATTGCAGCCTACATGG+TGG | - | chr1.1:14977971-14977990 | MS.gene33652:CDS | 45.0% | |
| TAGGCTGCAATTCTATCCGA+AGG | + | chr1.1:14977966-14977985 | None:intergenic | 45.0% | |
| TGAAGTTGCCGGAAAATGGA+GGG | - | chr1.1:14978775-14978794 | MS.gene33652:CDS | 45.0% | |
| TGTCAATGTCATTGCGTGTG+AGG | - | chr1.1:14978730-14978749 | MS.gene33652:CDS | 45.0% | |
| ! | CAGGCAGTTGGTTTCAATTC+AGG | - | chr1.1:14977935-14977954 | MS.gene33652:CDS | 45.0% |
| ! | CGACTTGTTCTGAATGGGAT+TGG | + | chr1.1:14977742-14977761 | None:intergenic | 45.0% |
| ! | CTGATAGAACCGTCTAGTTC+TGG | - | chr1.1:14977390-14977409 | MS.gene33652:CDS | 45.0% |
| ! | GAAATGGGGGGACTTCATTT+TGG | - | chr1.1:14978905-14978924 | MS.gene33652:CDS | 45.0% |
| ! | GCCCGATGAAAGTGTATCAA+CGG | - | chr1.1:14978487-14978506 | MS.gene33652:CDS | 45.0% |
| ! | GTTTAGGACTGTTCAGAGCA+TGG | - | chr1.1:14977689-14977708 | MS.gene33652:CDS | 45.0% |
| !! | TGCTAATGGTGCTATCTCTG+AGG | - | chr1.1:14978136-14978155 | MS.gene33652:CDS | 45.0% |
| AAATCATGGGAGGACAAGCC+AGG | + | chr1.1:14977279-14977298 | None:intergenic | 50.0% | |
| ACAGATCGTTGCACGGATTC+GGG | + | chr1.1:14978296-14978315 | None:intergenic | 50.0% | |
| AGGGCAAGGATGAAAATGGC+TGG | - | chr1.1:14978794-14978813 | MS.gene33652:CDS | 50.0% | |
| AGTTGGCTGATGCGTCGTAT+GGG | - | chr1.1:14977214-14977233 | MS.gene33652:CDS | 50.0% | |
| CAAACACTTGCTTCTAGGCC+AGG | - | chr1.1:14978233-14978252 | MS.gene33652:CDS | 50.0% | |
| CAGCTCAGAGCTAATTCAGG+AGG | - | chr1.1:14977456-14977475 | MS.gene33652:CDS | 50.0% | |
| CCGGTCAATCTCACATAAGG+TGG | + | chr1.1:14978263-14978282 | None:intergenic | 50.0% | |
| GAATCCGTGCAACGATCTGT+TGG | - | chr1.1:14978296-14978315 | MS.gene33652:CDS | 50.0% | |
| GATCGATGATCTCAGGCAGT+TGG | - | chr1.1:14977923-14977942 | MS.gene33652:CDS | 50.0% | |
| GCTGCTAGACGATCAGAAGA+CGG | + | chr1.1:14978065-14978084 | None:intergenic | 50.0% | |
| GGACAAGCCAGGTGTAACAT+CGG | + | chr1.1:14977268-14977287 | None:intergenic | 50.0% | |
| GGATTCGGGATCATCAACAC+CGG | + | chr1.1:14978282-14978301 | None:intergenic | 50.0% | |
| TCAATGCTCAACTGTCGTCC+CGG | - | chr1.1:14978422-14978441 | MS.gene33652:CDS | 50.0% | |
| TCTTAACCATGCGGAGAAGC+TGG | + | chr1.1:14978526-14978545 | None:intergenic | 50.0% | |
| TGAAAGGCAATGCTTGGCGA+GGG | - | chr1.1:14978703-14978722 | MS.gene33652:CDS | 50.0% | |
| TGTGCTAGCGCACTTTCAGA+AGG | - | chr1.1:14977876-14977895 | MS.gene33652:CDS | 50.0% | |
| TTGAAAGGCAATGCTTGGCG+AGG | - | chr1.1:14978702-14978721 | MS.gene33652:CDS | 50.0% | |
| TTGGCACACTCAGCAAAGTC+AGG | + | chr1.1:14977723-14977742 | None:intergenic | 50.0% | |
| ! | AACCTATCCTGGCTCTCTCT+CGG | + | chr1.1:14978677-14978696 | None:intergenic | 50.0% |
| ! | ATTGCAGCCTACATGGTGGA+AGG | - | chr1.1:14977975-14977994 | MS.gene33652:CDS | 50.0% |
| ! | CATCCTTGCCCTCCATTTTC+CGG | + | chr1.1:14978786-14978805 | None:intergenic | 50.0% |
| ! | CGATGAGTGTGATGACGATG+AGG | - | chr1.1:14977659-14977678 | MS.gene33652:CDS | 50.0% |
| ! | CTACATGGTGGAAGGACTTG+CGG | - | chr1.1:14977983-14978002 | MS.gene33652:CDS | 50.0% |
| !! | CCGTCTAGTTCTGGGATATC+TGG | - | chr1.1:14977399-14977418 | MS.gene33652:CDS | 50.0% |
| !! | CTCCTGAATTAGCTCTGAGC+TGG | + | chr1.1:14977458-14977477 | None:intergenic | 50.0% |
| !! | GAATTGGAGAGGGCATTGCT+TGG | - | chr1.1:14977627-14977646 | MS.gene33652:CDS | 50.0% |
| !! | GGACGACAGTTGAGCATTGA+TGG | + | chr1.1:14978422-14978441 | None:intergenic | 50.0% |
| AAGGGAGCCGATGTTACACC+TGG | - | chr1.1:14977258-14977277 | MS.gene33652:CDS | 55.0% | |
| AATGCTCAACTGTCGTCCCG+GGG | - | chr1.1:14978424-14978443 | MS.gene33652:CDS | 55.0% | |
| AGTAATTGCTTCGGGGTCCG+AGG | + | chr1.1:14977849-14977868 | None:intergenic | 55.0% | |
| CAATGCTCAACTGTCGTCCC+GGG | - | chr1.1:14978423-14978442 | MS.gene33652:CDS | 55.0% | |
| CATCGGGCATGTGATGAAGC+TGG | + | chr1.1:14978475-14978494 | None:intergenic | 55.0% | |
| CGCAAGTCCTTCCACCATGT+AGG | + | chr1.1:14977985-14978004 | None:intergenic | 55.0% | |
| CTCACATAAGGTGGCTTCCC+TGG | + | chr1.1:14978254-14978273 | None:intergenic | 55.0% | |
| GAGTTGGCTGATGCGTCGTA+TGG | - | chr1.1:14977213-14977232 | MS.gene33652:CDS | 55.0% | |
| GCCTCCAACAGATCGTTGCA+CGG | + | chr1.1:14978303-14978322 | None:intergenic | 55.0% | |
| GCTAGACGATCAGAAGACGG+AGG | + | chr1.1:14978062-14978081 | None:intergenic | 55.0% | |
| GTCGCATCATGACTCGCCAA+AGG | - | chr1.1:14977758-14977777 | MS.gene33652:CDS | 55.0% | |
| GTTCACCACAAGAGCTTCCC+CGG | + | chr1.1:14978444-14978463 | None:intergenic | 55.0% | |
| TACGACGCATCAGCCAACTC+TGG | + | chr1.1:14977213-14977232 | None:intergenic | 55.0% | |
| TCCGTGCAACGATCTGTTGG+AGG | - | chr1.1:14978299-14978318 | MS.gene33652:CDS | 55.0% | |
| TTCACCACAAGAGCTTCCCC+GGG | + | chr1.1:14978443-14978462 | None:intergenic | 55.0% | |
| TTCCGAGAGAGAGCCAGGAT+AGG | - | chr1.1:14978672-14978691 | MS.gene33652:CDS | 55.0% | |
| TTGCCGGAAAATGGAGGGCA+AGG | - | chr1.1:14978780-14978799 | MS.gene33652:CDS | 55.0% | |
| ! | TGCGGCTCGTTTGGCTTCAT+CGG | - | chr1.1:14978001-14978020 | MS.gene33652:CDS | 55.0% |
| ! | TGGGAGAAAGGGGGAAGTGT+TGG | + | chr1.1:14978594-14978613 | None:intergenic | 55.0% |
| ! | TGGGGGGACTTCATTTTGGG+TGG | - | chr1.1:14978909-14978928 | MS.gene33652:CDS | 55.0% |
| !! | GGGGGGACTTCATTTTGGGT+GGG | - | chr1.1:14978910-14978929 | MS.gene33652:CDS | 55.0% |
| ACGAGACCAGCTTCTCCGCA+TGG | - | chr1.1:14978517-14978536 | MS.gene33652:CDS | 60.0% | |
| CACTCTTCCGAGAGAGAGCC+AGG | - | chr1.1:14978667-14978686 | MS.gene33652:CDS | 60.0% | |
| GGAAGGACTTGCGGCTCGTT+TGG | - | chr1.1:14977992-14978011 | MS.gene33652:CDS | 60.0% | |
| TGTCATTGCGTGTGAGGGCG+AGG | - | chr1.1:14978736-14978755 | MS.gene33652:CDS | 60.0% | |
| ! | CGGCTCGTTTGGCTTCATCG+GGG | - | chr1.1:14978003-14978022 | MS.gene33652:CDS | 60.0% |
| ! | CTGGCTCTCTCTCGGAAGAG+TGG | + | chr1.1:14978669-14978688 | None:intergenic | 60.0% |
| ! | GCGGCTCGTTTGGCTTCATC+GGG | - | chr1.1:14978002-14978021 | MS.gene33652:CDS | 60.0% |
| TCGTCCCGGGGAAGCTCTTG+TGG | - | chr1.1:14978436-14978455 | MS.gene33652:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 14977192 | 14978970 | 14977192 | ID=MS.gene33652 |
| chr1.1 | mRNA | 14977192 | 14978970 | 14977192 | ID=MS.gene33652.t1;Parent=MS.gene33652 |
| chr1.1 | exon | 14977192 | 14978970 | 14977192 | ID=MS.gene33652.t1.exon1;Parent=MS.gene33652.t1 |
| chr1.1 | CDS | 14977192 | 14978970 | 14977192 | ID=cds.MS.gene33652.t1;Parent=MS.gene33652.t1 |
| Gene Sequence |
| Protein sequence |
