AlfalfaGEDB | MS.gene35794

M. sativa cultivar XinJiangDaYe / MS.gene35794

KEGG: K00430
GO: GO:0003674 GO:0003824 GO:0004601 GO:0005488 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0016209 GO:0016491 GO:0016684 GO:0020037 GO:0046906 GO:0048037 GO:0050896 GO:0055114 GO:0097159 GO:1901363
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35794.t1	RHN75585.1	98.3	117	2	0	1	117	133	249	2.40E-58	234.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35794.t1	Q9SUT2	73.1	119	30	1	1	117	71	189	1.5e-45	183.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35794.t1	G7IKK4	98.3	117	2	0	1	117	72	188	1.7e-58	234.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049298	MS.gene35794	0.855229	7.26E-62	-1.69E-46
MS.gene04932	MS.gene35794	0.817106	3.92E-52	-1.69E-46
MS.gene050338	MS.gene35794	0.836234	1.05E-56	-1.69E-46
MS.gene050444	MS.gene35794	-0.849306	3.52E-60	-1.69E-46
MS.gene050707	MS.gene35794	0.806983	6.31E-50	-1.69E-46
MS.gene050710	MS.gene35794	0.867794	1.05E-65	-1.69E-46
MS.gene050809	MS.gene35794	0.835727	1.42E-56	-1.69E-46
MS.gene051439	MS.gene35794	0.825788	3.87E-54	-1.69E-46
MS.gene051517	MS.gene35794	0.804525	2.07E-49	-1.69E-46
MS.gene051552	MS.gene35794	0.822529	2.26E-53	-1.69E-46
MS.gene051651	MS.gene35794	0.802883	4.54E-49	-1.69E-46
MS.gene051838	MS.gene35794	-0.812268	4.62E-51	-1.69E-46
MS.gene051864	MS.gene35794	-0.828516	8.61E-55	-1.69E-46
MS.gene051914	MS.gene35794	0.808808	2.58E-50	-1.69E-46
MS.gene052129	MS.gene35794	0.831247	1.86E-55	-1.69E-46
MS.gene052223	MS.gene35794	0.807663	4.53E-50	-1.69E-46
MS.gene052308	MS.gene35794	0.825917	3.61E-54	-1.69E-46
MS.gene052610	MS.gene35794	0.814587	1.43E-51	-1.69E-46
MS.gene052702	MS.gene35794	0.820372	7.10E-53	-1.69E-46
MS.gene053108	MS.gene35794	0.804375	2.23E-49	-1.69E-46
MS.gene053479	MS.gene35794	-0.80452	2.08E-49	-1.69E-46
MS.gene054850	MS.gene35794	0.84919	3.79E-60	-1.69E-46
MS.gene054884	MS.gene35794	0.805894	1.07E-49	-1.69E-46
MS.gene054941	MS.gene35794	0.863251	2.84E-64	-1.69E-46
MS.gene056330	MS.gene35794	0.800183	1.62E-48	-1.69E-46
MS.gene056387	MS.gene35794	-0.819904	9.09E-53	-1.69E-46
MS.gene05652	MS.gene35794	0.848521	5.81E-60	-1.69E-46
MS.gene056590	MS.gene35794	0.806576	7.69E-50	-1.69E-46
MS.gene056591	MS.gene35794	0.80509	1.58E-49	-1.69E-46
MS.gene056618	MS.gene35794	0.801885	7.29E-49	-1.69E-46
MS.gene056678	MS.gene35794	0.832341	9.99E-56	-1.69E-46
MS.gene056688	MS.gene35794	0.848759	5.00E-60	-1.69E-46
MS.gene056694	MS.gene35794	0.804374	2.23E-49	-1.69E-46
MS.gene056697	MS.gene35794	0.860498	1.98E-63	-1.69E-46
MS.gene056856	MS.gene35794	0.807195	5.69E-50	-1.69E-46
MS.gene057356	MS.gene35794	0.828041	1.12E-54	-1.69E-46
MS.gene057669	MS.gene35794	0.851902	6.56E-61	-1.69E-46
MS.gene057717	MS.gene35794	0.889478	2.34E-73	-1.69E-46
MS.gene058067	MS.gene35794	0.801804	7.58E-49	-1.69E-46
MS.gene058128	MS.gene35794	0.836617	8.43E-57	-1.69E-46
MS.gene058158	MS.gene35794	0.839416	1.61E-57	-1.69E-46
MS.gene058382	MS.gene35794	0.812311	4.52E-51	-1.69E-46
MS.gene058416	MS.gene35794	0.812386	4.35E-51	-1.69E-46
MS.gene058418	MS.gene35794	0.817309	3.52E-52	-1.69E-46
MS.gene058452	MS.gene35794	0.805367	1.38E-49	-1.69E-46
MS.gene058853	MS.gene35794	0.82774	1.32E-54	-1.69E-46
MS.gene05914	MS.gene35794	-0.804006	2.66E-49	-1.69E-46
MS.gene05926	MS.gene35794	0.90226	1.16E-78	-1.69E-46
MS.gene05960	MS.gene35794	0.831355	1.75E-55	-1.69E-46
MS.gene059616	MS.gene35794	0.830576	2.72E-55	-1.69E-46
MS.gene060087	MS.gene35794	0.804566	2.03E-49	-1.69E-46
MS.gene060405	MS.gene35794	0.867037	1.84E-65	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35794.t1	MTR_2g088770	98.291	117	2	0	1	117	72	188	7.28e-81	240
MS.gene35794.t1	MTR_4g046713	70.339	118	34	1	1	117	73	190	2.48e-54	172
MS.gene35794.t1	MTR_3g466200	58.333	120	47	3	1	117	71	190	9.61e-40	135
MS.gene35794.t1	MTR_1g025980	53.390	118	53	2	1	117	70	186	2.86e-39	133
MS.gene35794.t1	MTR_7g107520	57.627	118	47	2	1	117	71	186	6.04e-38	130
MS.gene35794.t1	MTR_3g072190	55.462	119	51	2	1	117	5	123	2.96e-37	126
MS.gene35794.t1	MTR_2g040000	55.085	118	51	2	1	117	75	191	3.06e-37	128
MS.gene35794.t1	MTR_3g094650	57.143	119	49	2	1	117	74	192	3.23e-37	128
MS.gene35794.t1	MTR_2g008160	55.556	117	50	2	1	117	70	184	4.40e-37	125
MS.gene35794.t1	MTR_5g022870	52.542	118	54	2	1	117	69	185	4.61e-37	127
MS.gene35794.t1	MTR_1g101830	56.780	118	49	2	1	117	73	189	6.26e-37	127
MS.gene35794.t1	MTR_3g072190	55.462	119	51	2	1	117	72	190	1.34e-36	126
MS.gene35794.t1	MTR_5g074970	55.833	120	50	3	1	117	76	195	4.34e-36	125
MS.gene35794.t1	MTR_2g084020	54.622	119	52	2	1	117	71	189	7.79e-36	124
MS.gene35794.t1	MTR_2g008160	55.556	117	50	2	1	117	70	184	8.38e-36	124
MS.gene35794.t1	MTR_8g075100	50.847	118	56	2	1	117	72	188	2.28e-35	123
MS.gene35794.t1	MTR_2g008160	55.556	117	50	2	1	117	70	184	2.45e-35	123
MS.gene35794.t1	MTR_2g084010	53.782	119	53	2	1	117	71	189	2.46e-35	123
MS.gene35794.t1	MTR_4g083710	52.101	119	55	2	1	117	73	191	3.90e-35	123
MS.gene35794.t1	MTR_2g084080	52.941	119	54	2	1	117	71	189	4.25e-35	122
MS.gene35794.t1	MTR_4g125940	53.390	118	53	2	1	117	19	135	4.93e-35	121
MS.gene35794.t1	MTR_2g029820	54.622	119	52	2	1	117	75	193	1.55e-34	122
MS.gene35794.t1	MTR_2g084110	52.101	119	55	2	1	117	71	189	1.68e-34	121
MS.gene35794.t1	MTR_4g125940	53.390	118	53	2	1	117	74	190	1.78e-34	121
MS.gene35794.t1	MTR_2g029800	53.782	119	53	2	1	117	75	193	2.10e-34	121
MS.gene35794.t1	MTR_5g049280	48.305	118	59	2	1	116	79	196	2.23e-34	121
MS.gene35794.t1	MTR_8g076820	53.782	119	53	2	1	117	76	194	2.71e-34	121
MS.gene35794.t1	MTR_5g014100	52.941	119	54	2	1	117	72	190	4.10e-34	120
MS.gene35794.t1	MTR_6g027440	52.137	117	53	2	1	116	67	181	6.89e-34	119
MS.gene35794.t1	MTR_5g017850	50.420	119	56	3	1	117	73	190	7.54e-34	119
MS.gene35794.t1	MTR_4g029200	50.420	119	57	2	1	117	92	210	8.20e-34	120
MS.gene35794.t1	MTR_5g021060	52.941	119	54	2	1	117	76	194	9.40e-34	119
MS.gene35794.t1	MTR_5g017860	50.420	119	56	3	1	117	73	190	1.44e-33	119
MS.gene35794.t1	MTR_2g029560	50.420	119	57	2	1	117	70	188	1.70e-33	119
MS.gene35794.t1	MTR_2g029815	52.941	119	54	2	1	117	75	193	1.74e-33	119
MS.gene35794.t1	MTR_2g029830	50.000	122	53	2	1	117	6	124	4.08e-33	117
MS.gene35794.t1	MTR_2g008710	52.586	116	52	2	1	116	73	185	7.64e-33	117
MS.gene35794.t1	MTR_5g083860	52.101	119	55	2	1	117	77	195	1.08e-32	116
MS.gene35794.t1	MTR_2g084090	52.101	119	55	2	1	117	71	189	1.31e-32	116
MS.gene35794.t1	MTR_2g029830	50.000	122	53	2	1	117	74	192	1.42e-32	117
MS.gene35794.t1	MTR_2g028980	52.101	119	55	2	1	117	75	193	1.92e-32	116
MS.gene35794.t1	MTR_1g054205	48.333	120	59	2	1	117	70	189	4.89e-32	115
MS.gene35794.t1	MTR_1g077000	46.610	118	61	2	1	117	85	201	5.39e-32	115
MS.gene35794.t1	MTR_0155s0040	48.305	118	59	2	1	117	73	189	6.91e-32	114
MS.gene35794.t1	MTR_4g122640	51.261	119	56	2	1	117	84	202	7.40e-32	114
MS.gene35794.t1	MTR_1g022970	51.261	119	56	2	1	117	92	210	1.02e-31	114
MS.gene35794.t1	MTR_4g114210	50.000	116	55	2	1	116	67	179	1.37e-31	114
MS.gene35794.t1	MTR_2g029850	51.261	119	56	2	1	117	75	193	1.69e-31	114
MS.gene35794.t1	MTR_4g029180	52.066	121	54	4	1	117	73	193	2.11e-31	113
MS.gene35794.t1	MTR_2g084000	49.580	119	58	2	1	117	72	190	2.24e-31	113
MS.gene35794.t1	MTR_1g115900	52.101	119	54	3	1	117	73	190	2.55e-31	113
MS.gene35794.t1	MTR_4g074980	48.739	119	59	2	1	117	71	189	2.62e-31	111
MS.gene35794.t1	MTR_2g437770	47.009	117	59	2	1	117	96	209	3.53e-31	113
MS.gene35794.t1	MTR_2g067440	50.862	116	57	0	1	116	106	221	3.90e-31	114
MS.gene35794.t1	MTR_2g029730	48.739	119	59	2	1	117	71	189	4.23e-31	112
MS.gene35794.t1	MTR_4g074980	48.739	119	59	2	1	117	71	189	4.23e-31	112
MS.gene35794.t1	MTR_4g074995	50.420	119	44	3	1	117	70	175	4.61e-31	112
MS.gene35794.t1	MTR_2g029860	52.101	119	55	2	1	117	75	193	5.17e-31	112
MS.gene35794.t1	MTR_7g086870	46.154	117	60	2	1	116	68	182	7.04e-31	111
MS.gene35794.t1	MTR_3g094670	57.143	119	49	2	1	117	74	192	7.33e-31	112
MS.gene35794.t1	MTR_7g072510	48.739	119	59	2	1	117	66	184	7.58e-31	111
MS.gene35794.t1	MTR_4g029170	51.240	121	55	4	1	117	73	193	8.27e-31	111
MS.gene35794.t1	MTR_7g029030	47.899	119	60	1	1	117	71	189	1.15e-30	111
MS.gene35794.t1	MTR_5g074860	51.639	122	54	4	1	117	75	196	1.32e-30	111
MS.gene35794.t1	MTR_3g094630	56.303	119	50	2	1	117	74	192	1.49e-30	111
MS.gene35794.t1	MTR_4g074990	49.580	119	58	2	1	117	70	188	1.89e-30	110
MS.gene35794.t1	MTR_7g072480	49.580	119	58	2	1	117	70	188	2.25e-30	110
MS.gene35794.t1	MTR_7g086820	44.444	117	62	2	1	116	66	180	5.21e-30	109
MS.gene35794.t1	MTR_5g074760	52.459	122	53	5	1	117	71	192	7.31e-30	109
MS.gene35794.t1	MTR_7g093370	49.167	120	58	2	1	117	115	234	9.88e-30	109
MS.gene35794.t1	MTR_5g074740	52.459	122	53	5	1	117	71	192	9.92e-30	108
MS.gene35794.t1	MTR_4g133800	47.863	117	58	2	1	117	87	200	1.10e-29	108
MS.gene35794.t1	MTR_2g029740	50.420	119	57	2	1	117	75	193	1.16e-29	109
MS.gene35794.t1	MTR_3g092990	47.899	119	60	2	1	117	61	179	3.86e-29	107
MS.gene35794.t1	MTR_3g092990	47.899	119	60	2	1	117	72	190	5.37e-29	107
MS.gene35794.t1	MTR_2g067450	48.739	119	58	1	1	116	56	174	5.39e-29	106
MS.gene35794.t1	MTR_7g026990	47.059	119	61	2	1	117	77	195	8.17e-29	106
MS.gene35794.t1	MTR_2g029750	50.420	119	57	2	1	117	75	193	8.53e-29	107
MS.gene35794.t1	MTR_2g077990	48.739	119	58	1	1	116	122	240	8.91e-29	107
MS.gene35794.t1	MTR_2g078280	47.899	119	59	1	1	116	122	240	9.14e-29	107
MS.gene35794.t1	MTR_4g029190	45.378	119	63	2	1	117	92	210	1.39e-28	106
MS.gene35794.t1	MTR_4g031140	47.059	119	61	2	1	117	74	192	1.56e-28	106
MS.gene35794.t1	MTR_2g008730	52.475	101	47	1	16	116	62	161	2.55e-28	104
MS.gene35794.t1	MTR_5g074710	49.180	122	57	5	1	117	71	192	6.23e-28	104
MS.gene35794.t1	MTR_4g030890	46.218	119	62	2	1	117	146	264	8.63e-28	105
MS.gene35794.t1	MTR_2g029910	47.899	119	60	2	1	117	76	194	4.97e-27	102
MS.gene35794.t1	MTR_2g078610	46.218	119	61	1	1	116	122	240	7.30e-27	102
MS.gene35794.t1	MTR_7g086790	43.966	116	61	2	2	116	17	129	9.32e-27	98.2
MS.gene35794.t1	MTR_4g087965	43.443	122	64	2	1	117	88	209	2.42e-26	100
MS.gene35794.t1	MTR_8g062780	39.167	120	70	2	1	117	69	188	1.39e-25	98.2
MS.gene35794.t1	MTR_5g074860	49.107	112	52	4	1	107	75	186	1.83e-25	97.1
MS.gene35794.t1	MTR_5g016010	43.443	122	64	3	1	117	73	194	2.65e-25	97.4
MS.gene35794.t1	MTR_3g467600	47.541	122	59	5	1	117	73	194	3.73e-25	97.1
MS.gene35794.t1	MTR_4g095450	45.902	122	61	3	1	117	73	194	3.75e-25	97.1
MS.gene35794.t1	MTR_1g086320	45.455	121	62	3	1	117	76	196	7.78e-25	96.3
MS.gene35794.t1	MTR_1g009750	42.975	121	65	2	1	117	73	193	2.11e-24	95.1
MS.gene35794.t1	MTR_7g072490	48.958	96	47	2	1	94	2	97	2.22e-24	92.4
MS.gene35794.t1	MTR_2g099175	41.379	116	65	2	1	116	82	194	3.35e-24	94.7
MS.gene35794.t1	MTR_6g043280	42.017	119	66	2	1	117	87	204	3.67e-24	94.4
MS.gene35794.t1	MTR_1g086490	44.628	121	63	3	1	117	76	196	4.34e-24	94.4
MS.gene35794.t1	MTR_1g038680	47.541	122	59	3	1	117	75	196	5.82e-24	94.0
MS.gene35794.t1	MTR_4g132490	38.793	116	69	1	1	114	75	190	1.44e-23	92.8
MS.gene35794.t1	MTR_1g090760	38.843	121	70	2	1	117	74	194	2.16e-23	92.4
MS.gene35794.t1	MTR_0147s0010	43.158	95	54	0	22	116	133	227	6.69e-23	91.7
MS.gene35794.t1	MTR_3g105790	43.925	107	58	1	1	107	71	175	1.05e-22	90.5
MS.gene35794.t1	MTR_4g132110	43.697	119	62	3	1	116	78	194	1.11e-22	90.5
MS.gene35794.t1	MTR_3g466180	47.059	119	61	2	1	117	77	195	1.41e-22	90.1
MS.gene35794.t1	MTR_0286s0010	40.833	120	68	2	1	117	81	200	2.40e-22	89.7
MS.gene35794.t1	MTR_6g008075	40.833	120	68	2	1	117	81	200	2.40e-22	89.7
MS.gene35794.t1	MTR_6g043240	41.176	119	65	3	1	117	88	203	5.99e-22	88.6
MS.gene35794.t1	MTR_5g074700	49.485	97	46	3	24	117	3	99	7.93e-22	86.3
MS.gene35794.t1	MTR_1g066710	40.517	116	68	1	2	116	74	189	1.78e-21	87.0
MS.gene35794.t1	MTR_4g127670	38.843	121	68	3	1	117	70	188	2.55e-21	86.7
MS.gene35794.t1	MTR_4g132110	41.935	124	62	4	1	116	78	199	2.64e-20	84.0
MS.gene35794.t1	MTR_6g043460	37.500	120	71	3	1	117	82	200	3.04e-20	84.0
MS.gene35794.t1	MTR_1g066380	37.607	117	72	1	1	116	5	121	4.39e-20	82.4
MS.gene35794.t1	MTR_3g105790	44.565	92	51	0	16	107	8	99	8.76e-20	81.3
MS.gene35794.t1	MTR_1g066380	37.607	117	72	1	1	116	73	189	9.52e-20	82.4
MS.gene35794.t1	MTR_1g066680	37.607	117	72	1	1	116	72	188	2.41e-18	78.6
MS.gene35794.t1	MTR_1g066640	37.607	117	72	1	1	116	73	189	6.45e-18	77.4
MS.gene35794.t1	MTR_7g086785	38.679	106	60	2	1	105	4	105	3.02e-17	72.4
MS.gene35794.t1	MTR_5g033470	36.667	120	72	3	1	116	119	238	1.33e-16	74.3
MS.gene35794.t1	MTR_6g048160	55.000	60	25	1	1	60	29	86	2.72e-16	68.6
MS.gene35794.t1	MTR_1g089005	58.065	62	25	1	5	65	71	132	2.81e-15	67.8
MS.gene35794.t1	MTR_3g072210	57.407	54	23	0	64	117	55	108	2.67e-14	66.6
MS.gene35794.t1	MTR_1g009750	35.897	117	62	2	1	117	73	176	2.82e-14	67.4
MS.gene35794.t1	MTR_4g114220	41.346	104	47	5	1	100	49	142	3.00e-14	64.7
MS.gene35794.t1	MTR_3g072260	56.452	62	25	2	1	60	72	133	3.20e-14	64.7
MS.gene35794.t1	MTR_6g071110	35.577	104	55	2	10	113	70	161	1.33e-12	60.8
MS.gene35794.t1	MTR_2g077980	52.727	55	26	0	6	60	1	55	1.71e-12	62.4
MS.gene35794.t1	MTR_7g086810	52.174	46	22	0	27	72	54	99	7.62e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35794.t1	AT4G11290	73.109	119	30	1	1	117	71	189	6.63e-59	184
MS.gene35794.t1	AT3G21770	71.795	117	33	0	1	117	75	191	1.44e-57	181
MS.gene35794.t1	AT1G05260	73.504	117	31	0	1	117	72	188	4.63e-57	179
MS.gene35794.t1	AT5G15180	57.265	117	50	0	1	117	78	194	2.19e-45	149
MS.gene35794.t1	AT1G05240	53.846	117	54	0	1	117	72	188	2.78e-42	141
MS.gene35794.t1	AT1G05250	53.846	117	54	0	1	117	72	188	2.78e-42	141
MS.gene35794.t1	AT3G01190	57.265	117	48	1	1	117	72	186	6.29e-40	135
MS.gene35794.t1	AT4G36430	54.622	119	52	2	1	117	76	194	5.95e-38	130
MS.gene35794.t1	AT5G42180	50.847	118	56	2	1	117	69	185	1.97e-37	129
MS.gene35794.t1	AT1G49570	52.941	119	54	2	1	117	94	212	6.07e-37	128
MS.gene35794.t1	AT5G05340	53.782	119	53	2	1	117	76	194	2.62e-36	126
MS.gene35794.t1	AT2G18150	53.782	119	53	2	1	117	82	200	4.69e-36	125
MS.gene35794.t1	AT3G03670	49.573	117	58	1	1	116	69	185	7.63e-36	125
MS.gene35794.t1	AT5G66390	53.782	119	53	2	1	117	79	197	6.49e-35	122
MS.gene35794.t1	AT1G68850	46.610	118	61	2	1	116	76	193	3.82e-34	120
MS.gene35794.t1	AT5G51890	50.000	118	57	2	1	117	72	188	1.07e-33	119
MS.gene35794.t1	AT1G77100	51.282	117	56	1	1	117	70	185	1.38e-33	119
MS.gene35794.t1	AT2G35380	51.261	119	56	2	1	117	76	194	1.50e-33	119
MS.gene35794.t1	AT4G33420	48.305	118	59	2	1	117	83	199	1.65e-33	119
MS.gene35794.t1	AT2G41480	51.724	116	53	2	1	116	75	187	2.20e-33	118
MS.gene35794.t1	AT3G50990	52.542	118	54	2	1	116	87	204	2.37e-33	119
MS.gene35794.t1	AT4G33420	48.305	118	59	2	1	117	130	246	3.19e-33	119
MS.gene35794.t1	AT5G17820	51.724	116	52	2	1	116	70	181	4.60e-33	117
MS.gene35794.t1	AT2G38390	52.500	120	54	3	1	117	77	196	4.88e-33	118
MS.gene35794.t1	AT1G44970	52.941	119	54	2	1	117	91	209	1.10e-32	117
MS.gene35794.t1	AT5G64120	51.724	116	53	2	1	116	81	193	1.76e-32	116
MS.gene35794.t1	AT5G06730	47.899	119	60	2	1	117	79	197	2.14e-32	116
MS.gene35794.t1	AT5G17820	51.724	116	52	2	1	116	123	234	2.67e-32	116
MS.gene35794.t1	AT2G18140	48.739	119	59	2	1	117	81	199	3.97e-32	115
MS.gene35794.t1	AT4G25980	50.427	117	56	2	1	117	117	231	4.53e-32	114
MS.gene35794.t1	AT2G39040	51.667	120	55	2	1	117	92	211	7.14e-32	115
MS.gene35794.t1	AT4G25980	50.427	117	56	2	1	117	72	186	8.39e-32	114
MS.gene35794.t1	AT4G16270	49.580	119	58	2	1	117	96	214	1.23e-31	114
MS.gene35794.t1	AT5G06720	47.059	119	61	2	1	117	78	196	1.53e-31	114
MS.gene35794.t1	AT2G38380	50.833	120	56	3	1	117	77	196	1.65e-31	114
MS.gene35794.t1	AT5G58390	50.000	120	57	3	1	117	67	186	5.89e-31	112
MS.gene35794.t1	AT5G39580	50.862	116	54	2	1	116	71	183	7.56e-31	110
MS.gene35794.t1	AT4G08770	49.167	120	58	3	1	117	70	189	8.64e-31	112
MS.gene35794.t1	AT2G35380	51.923	104	49	1	15	117	3	106	2.39e-30	108
MS.gene35794.t1	AT3G32980	49.167	120	58	3	1	117	77	196	2.74e-30	110
MS.gene35794.t1	AT5G14130	47.899	119	60	1	1	117	78	196	3.33e-30	110
MS.gene35794.t1	AT5G14130	47.899	119	60	1	1	117	119	237	5.22e-30	110
MS.gene35794.t1	AT5G39580	50.862	116	54	2	1	116	71	183	6.17e-30	109
MS.gene35794.t1	AT5G19890	49.153	118	56	3	1	117	76	190	7.90e-30	109
MS.gene35794.t1	AT4G08780	48.333	120	59	3	1	117	70	189	2.76e-29	108
MS.gene35794.t1	AT3G49110	50.000	120	57	3	1	117	79	198	6.96e-29	107
MS.gene35794.t1	AT3G49120	49.167	120	58	3	1	117	78	197	7.94e-29	107
MS.gene35794.t1	AT1G14550	47.500	120	60	3	1	117	72	191	8.03e-29	106
MS.gene35794.t1	AT5G58400	49.167	120	58	3	1	117	76	195	3.16e-28	105
MS.gene35794.t1	AT4G26010	46.154	117	60	2	1	116	68	182	3.28e-28	104
MS.gene35794.t1	AT4G26010	46.154	117	60	2	1	116	96	210	4.37e-28	105
MS.gene35794.t1	AT5G64110	46.154	117	59	2	1	117	80	192	9.96e-28	103
MS.gene35794.t1	AT5G22410	47.458	118	56	3	1	116	74	187	5.58e-27	102
MS.gene35794.t1	AT4G33870	41.026	117	68	1	1	116	114	230	1.19e-26	102
MS.gene35794.t1	AT2G34060	45.082	122	62	2	1	117	88	209	1.23e-26	101
MS.gene35794.t1	AT2G22420	42.857	119	66	2	1	117	69	187	2.37e-26	100
MS.gene35794.t1	AT1G14540	44.538	119	64	2	1	117	67	185	2.58e-26	99.8
MS.gene35794.t1	AT2G24800	43.590	117	64	1	1	117	77	191	3.15e-26	98.2
MS.gene35794.t1	AT2G24800	43.590	117	64	1	1	117	77	191	1.43e-25	98.2
MS.gene35794.t1	AT5G64100	43.966	116	61	2	1	116	83	194	2.77e-25	97.4
MS.gene35794.t1	AT4G31760	47.107	121	54	4	1	117	75	189	4.01e-25	97.1
MS.gene35794.t1	AT1G71695	45.455	121	62	3	1	117	90	210	6.79e-25	96.7
MS.gene35794.t1	AT2G43480	43.103	116	62	2	1	116	83	194	7.38e-25	96.3
MS.gene35794.t1	AT5G24070	43.590	117	60	3	1	116	83	194	4.93e-24	94.4
MS.gene35794.t1	AT4G21960	42.241	116	66	1	2	116	78	193	5.31e-24	94.0
MS.gene35794.t1	AT1G30870	42.735	117	64	2	1	117	97	210	8.98e-24	93.6
MS.gene35794.t1	AT4G17690	42.149	121	65	3	1	117	72	191	1.95e-23	92.4
MS.gene35794.t1	AT5G47000	41.322	121	66	3	1	117	79	198	2.72e-23	92.0
MS.gene35794.t1	AT5G67400	41.803	122	66	3	1	117	73	194	4.22e-23	91.7
MS.gene35794.t1	AT1G34510	41.880	117	65	2	1	116	68	182	2.65e-22	89.4
MS.gene35794.t1	AT5G40150	38.333	120	71	2	1	117	78	197	1.28e-21	87.4
MS.gene35794.t1	AT3G49960	39.344	122	69	3	1	117	73	194	2.44e-21	87.0
MS.gene35794.t1	AT3G17070	37.815	119	71	2	1	116	21	139	2.75e-21	85.9
MS.gene35794.t1	AT4G37530	40.164	122	68	3	1	117	73	194	3.93e-21	85.5
MS.gene35794.t1	AT3G17070	37.815	119	71	2	1	116	84	202	4.12e-21	86.3
MS.gene35794.t1	AT5G19880	43.802	121	64	2	1	117	71	191	6.29e-21	85.9
MS.gene35794.t1	AT4G37530	40.164	122	68	3	1	117	73	194	8.66e-21	85.5
MS.gene35794.t1	AT2G18980	39.669	121	66	3	1	117	71	188	1.21e-20	84.7
MS.gene35794.t1	AT4G37520	39.344	122	69	3	1	117	73	194	1.25e-20	85.1
MS.gene35794.t1	AT3G28200	38.333	120	71	2	1	117	67	186	4.48e-20	83.2
MS.gene35794.t1	AT4G30170	35.537	121	71	3	1	117	73	190	3.34e-19	80.9
MS.gene35794.t1	AT1G24110	36.134	119	73	2	1	116	68	186	3.37e-19	80.9
MS.gene35794.t1	AT4G37520	39.344	122	66	4	1	117	73	191	7.17e-19	80.1
MS.gene35794.t1	AT2G37130	36.441	118	73	2	1	116	45	162	2.46e-17	75.5
MS.gene35794.t1	AT2G37130	36.752	117	72	2	2	116	77	193	3.31e-17	75.5
MS.gene35794.t1	AT3G42570	37.500	104	64	1	12	114	40	143	1.37e-16	71.2

Find 0 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTCTATCTTTAACAGACTA+AGG	-	15131:22122-22141	MS.gene35794:intron	25.0%
!!	TTTTAAATCAAGTCCTTGAT+TGG	+	15131:22375-22394	None:intergenic	25.0%
	AGCTTATCTACTGATACATT+TGG	-	15131:22212-22231	MS.gene35794:intron	30.0%
	ATAGAATTGAGTACTTACTG+TGG	+	15131:22109-22128	None:intergenic	30.0%
	TTAAATAAGCCAATCCAAAC+AGG	+	15131:22148-22167	None:intergenic	30.0%
!	ATTTGGTGATTTGTGATTTC+AGG	-	15131:22229-22248	MS.gene35794:CDS	30.0%
!	TTTGGTGATTTGTGATTTCA+GGG	-	15131:22230-22249	MS.gene35794:CDS	30.0%
	AAGCCTCTAACAGTAAGATT+TGG	+	15131:21985-22004	None:intergenic	35.0%
!!	GTTGGTTTGTTGAGTTCAAA+AGG	+	15131:21942-21961	None:intergenic	35.0%
!!!	GAGCATTTTTTTCAGCTTGT+TGG	+	15131:21960-21979	None:intergenic	35.0%
	ATTGGCAAAGAGAGTTTGGA+GGG	+	15131:22357-22376	None:intergenic	40.0%
	CAAACTCTCTTTGCCAATCA+AGG	-	15131:22359-22378	MS.gene35794:CDS	40.0%
	CCATATTGGAAAGTTCCAAC+AGG	-	15131:22257-22276	MS.gene35794:CDS	40.0%
	CCTCCAAATCTTACTGTTAG+AGG	-	15131:21979-21998	MS.gene35794:CDS	40.0%
	CCTCTAACAGTAAGATTTGG+AGG	+	15131:21982-22001	None:intergenic	40.0%
	CCTGTTGGAACTTTCCAATA+TGG	+	15131:22260-22279	None:intergenic	40.0%
	CTTGATTGGCAAAGAGAGTT+TGG	+	15131:22361-22380	None:intergenic	40.0%
	GAAAGTTCCAACAGGTAGAA+GGG	-	15131:22265-22284	MS.gene35794:CDS	40.0%
	TGGAGTCGTATCGAATTTGT+TGG	-	15131:22289-22308	MS.gene35794:CDS	40.0%
	TTAACAGACTAAGGCCTGTT+TGG	-	15131:22131-22150	MS.gene35794:intron	40.0%
	AAAGACTTAGTCCTCCTCTC+TGG	-	15131:22392-22411	MS.gene35794:CDS	45.0%
	AAGACTTAGTCCTCCTCTCT+GGG	-	15131:22393-22412	MS.gene35794:CDS	45.0%
	AGACTAAGGCCTGTTTGGAT+TGG	-	15131:22136-22155	MS.gene35794:intron	45.0%
	AGGGTGGTGAAGTTGGAAAA+TGG	+	15131:22338-22357	None:intergenic	45.0%
	CAGCACAAGAAACAACACCA+GGG	+	15131:22050-22069	None:intergenic	45.0%
	GATTGGCAAAGAGAGTTTGG+AGG	+	15131:22358-22377	None:intergenic	45.0%
	GATTTCAGGGTGGTCCATAT+TGG	-	15131:22243-22262	MS.gene35794:CDS	45.0%
	GGAAAGTTCCAACAGGTAGA+AGG	-	15131:22264-22283	MS.gene35794:CDS	45.0%
	GTGAAGTTGGAAAATGGAGC+AGG	+	15131:22332-22351	None:intergenic	45.0%
	TCAGCACAAGAAACAACACC+AGG	+	15131:22051-22070	None:intergenic	45.0%
!	GGTGATTTGTGATTTCAGGG+TGG	-	15131:22233-22252	MS.gene35794:CDS	45.0%
	ACTCCATCCCTTCTACCTGT+TGG	+	15131:22275-22294	None:intergenic	50.0%
	AGTTTGGAGGGTGGTGAAGT+TGG	+	15131:22345-22364	None:intergenic	50.0%
	CTTGTTGAAGCTGAATGCCC+TGG	-	15131:22030-22049	MS.gene35794:CDS	50.0%
	GTTCCAACAGGTAGAAGGGA+TGG	-	15131:22269-22288	MS.gene35794:CDS	50.0%
	TGTGGCTGCAATAGAGTCTC+TGG	+	15131:22091-22110	None:intergenic	50.0%
!	CAGGGCATTCAGCTTCAACA+AGG	+	15131:22032-22051	None:intergenic	50.0%
	GGCAAAGAGAGTTTGGAGGG+TGG	+	15131:22354-22373	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
15131	gene	21922	22413	21922	ID=MS.gene35794
15131	mRNA	21922	22413	21922	ID=MS.gene35794.t1;Parent=MS.gene35794
15131	exon	22225	22413	22225	ID=MS.gene35794.t1.exon1;Parent=MS.gene35794.t1
15131	CDS	22225	22413	22225	ID=cds.MS.gene35794.t1;Parent=MS.gene35794.t1
15131	exon	21922	22084	21922	ID=MS.gene35794.t1.exon2;Parent=MS.gene35794.t1
15131	CDS	21922	22084	21922	ID=cds.MS.gene35794.t1;Parent=MS.gene35794.t1

Gene Sequence

>MS.gene35794

GGATGTGATGGATCAGTCCTTTTGAACTCAACAAACCAACAAGCTGAAAAAAATGCTCCTCCAAATCTTACTGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTTGTTTCTTGTGCTGATATCATAGCTTTATCTGCCAGAGACTCTATTGCAGCCACAGTAAGTACTCAATTCTATCTTTAACAGACTAAGGCCTGTTTGGATTGGCTTATTTAAGCTTATCTACTGTTTATAAGCTCTTTAAGTAGCTTAAGATTGCAAGCTTATCTACTGATACATTTGGTGATTTGTGATTTCAGGGTGGTCCATATTGGAAAGTTCCAACAGGTAGAAGGGATGGAGTCGTATCGAATTTGTTGGAAGCAAATCAAAACATTCCTGCTCCATTTTCCAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTGATTTAAAAGACTTAGTCCTCCTCTCTG

Protein sequence

>MS.gene35794.t1

GCDGSVLLNSTNQQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIAATGGPYWKVPTGRRDGVVSNLLEANQNIPAPFSNFTTLQTLFANQGLDLKDLVLLS