Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37122.t1 | XP_024642408.1 | 98.1 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 1.90E-78 | 302 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37122.t1 | Q9M895 | 74.8 | 155 | 39 | 0 | 1 | 155 | 461 | 615 | 6.9e-61 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37122.t1 | A0A072U7X6 | 98.1 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 1.4e-78 | 302.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene37122 | 0.832449 | 9.39E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene37122 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene37122 | 0.832886 | 7.32E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene37122 | 0.815518 | 8.88E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene37122 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene37122 | 0.809331 | 2.00E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene37122 | 0.842397 | 2.65E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene37122 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene37122 | 0.81817 | 2.25E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene37122 | 0.808229 | 3.43E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene37122 | 0.836987 | 6.78E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene37122 | 0.810202 | 1.30E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene37122 | -0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene050809 | MS.gene37122 | -0.803062 | 4.17E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene37122 | 0.821758 | 3.41E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene37122 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene37122 | 0.80635 | 8.59E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene37122 | 0.800277 | 1.55E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene37122 | -0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene37122 | 0.825096 | 5.65E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene37122 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene052129 | MS.gene37122 | -0.81938 | 1.20E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene37122 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene37122 | 0.826873 | 2.14E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene37122 | 0.831603 | 1.52E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene37122 | 0.814552 | 1.45E-51 | -1.69E-46 |
| MS.gene053284 | MS.gene37122 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene37122 | -0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene37122 | 0.836807 | 7.54E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene37122 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene37122 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene37122 | 0.824264 | 8.87E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene37122 | 0.837117 | 6.28E-57 | -1.69E-46 |
| MS.gene055636 | MS.gene37122 | 0.820163 | 7.93E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene37122 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene37122 | 0.821322 | 4.29E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene37122 | 0.819843 | 9.38E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene37122 | 0.804582 | 2.02E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene37122 | -0.812999 | 3.20E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene37122 | 0.806161 | 9.41E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene37122 | 0.809739 | 1.63E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene37122 | 0.842973 | 1.86E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene37122 | 0.822189 | 2.71E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene37122 | 0.819064 | 1.41E-52 | -1.69E-46 |
| MS.gene059079 | MS.gene37122 | 0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene37122 | 0.819035 | 1.43E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene37122 | 0.808228 | 3.43E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene37122 | 0.804655 | 1.95E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene37122 | 0.804496 | 2.10E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene37122 | 0.818388 | 2.01E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene37122 | 0.817396 | 3.37E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene37122 | 0.830234 | 3.29E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37122.t1 | MTR_6g016600 | 98.065 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 6.29e-105 | 313 |
| MS.gene37122.t1 | MTR_5g069780 | 52.459 | 122 | 54 | 2 | 1 | 120 | 447 | 566 | 1.47e-29 | 114 |
| MS.gene37122.t1 | MTR_7g010800 | 49.206 | 126 | 62 | 1 | 1 | 126 | 339 | 462 | 4.91e-29 | 112 |
| MS.gene37122.t1 | MTR_7g096060 | 41.860 | 129 | 75 | 0 | 1 | 129 | 374 | 502 | 7.73e-29 | 112 |
| MS.gene37122.t1 | MTR_3g115110 | 45.985 | 137 | 69 | 2 | 1 | 137 | 382 | 513 | 1.32e-28 | 111 |
| MS.gene37122.t1 | MTR_3g462930 | 49.180 | 122 | 58 | 2 | 1 | 120 | 438 | 557 | 5.23e-28 | 110 |
| MS.gene37122.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 1.27e-27 | 108 |
| MS.gene37122.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 1.32e-27 | 108 |
| MS.gene37122.t1 | MTR_6g059690 | 42.063 | 126 | 73 | 0 | 1 | 126 | 331 | 456 | 1.17e-26 | 106 |
| MS.gene37122.t1 | MTR_2g438140 | 38.043 | 184 | 100 | 4 | 1 | 173 | 419 | 599 | 1.20e-26 | 105 |
| MS.gene37122.t1 | MTR_2g438140 | 38.043 | 184 | 100 | 4 | 1 | 173 | 359 | 539 | 2.11e-26 | 105 |
| MS.gene37122.t1 | MTR_4g094662 | 38.043 | 184 | 100 | 4 | 1 | 173 | 362 | 542 | 2.14e-26 | 105 |
| MS.gene37122.t1 | MTR_0376s0020 | 40.164 | 122 | 73 | 0 | 1 | 122 | 134 | 255 | 9.93e-26 | 103 |
| MS.gene37122.t1 | MTR_7g078570 | 41.270 | 126 | 74 | 0 | 1 | 126 | 326 | 451 | 7.33e-25 | 100 |
| MS.gene37122.t1 | MTR_3g104470 | 42.336 | 137 | 74 | 2 | 1 | 137 | 354 | 485 | 3.06e-24 | 99.4 |
| MS.gene37122.t1 | MTR_4g064350 | 40.476 | 126 | 75 | 0 | 1 | 126 | 454 | 579 | 7.13e-24 | 98.2 |
| MS.gene37122.t1 | MTR_1g028390 | 42.748 | 131 | 73 | 1 | 1 | 131 | 458 | 586 | 8.75e-24 | 97.8 |
| MS.gene37122.t1 | MTR_5g075340 | 44.615 | 130 | 67 | 3 | 1 | 130 | 359 | 483 | 5.61e-23 | 95.5 |
| MS.gene37122.t1 | MTR_1g044600 | 39.683 | 126 | 76 | 0 | 1 | 126 | 262 | 387 | 7.55e-23 | 95.1 |
| MS.gene37122.t1 | MTR_3g104480 | 41.606 | 137 | 75 | 2 | 1 | 137 | 352 | 483 | 1.00e-22 | 94.7 |
| MS.gene37122.t1 | MTR_3g096000 | 39.552 | 134 | 78 | 2 | 1 | 131 | 430 | 563 | 2.55e-22 | 93.6 |
| MS.gene37122.t1 | MTR_7g089040 | 47.312 | 93 | 47 | 1 | 1 | 93 | 818 | 908 | 5.40e-21 | 89.7 |
| MS.gene37122.t1 | MTR_7g089040 | 43.434 | 99 | 55 | 1 | 1 | 99 | 515 | 612 | 1.84e-13 | 68.2 |
| MS.gene37122.t1 | MTR_1g063380 | 44.762 | 105 | 56 | 1 | 1 | 105 | 336 | 438 | 1.00e-20 | 89.0 |
| MS.gene37122.t1 | MTR_1g063380 | 37.719 | 114 | 61 | 2 | 1 | 114 | 612 | 715 | 4.53e-17 | 78.6 |
| MS.gene37122.t1 | MTR_7g101870 | 43.810 | 105 | 57 | 1 | 1 | 105 | 337 | 439 | 2.23e-20 | 88.2 |
| MS.gene37122.t1 | MTR_7g101870 | 32.836 | 134 | 80 | 2 | 1 | 134 | 613 | 736 | 9.13e-17 | 77.8 |
| MS.gene37122.t1 | MTR_3g117230 | 39.286 | 112 | 66 | 1 | 1 | 112 | 273 | 382 | 4.03e-20 | 86.7 |
| MS.gene37122.t1 | MTR_8g056860 | 41.748 | 103 | 58 | 1 | 10 | 112 | 616 | 716 | 6.87e-20 | 86.7 |
| MS.gene37122.t1 | MTR_1g083330 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 7.23e-20 | 86.3 |
| MS.gene37122.t1 | MTR_4g033235 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 7.78e-20 | 85.9 |
| MS.gene37122.t1 | MTR_1g095660 | 38.053 | 113 | 68 | 1 | 1 | 113 | 258 | 368 | 8.05e-20 | 85.9 |
| MS.gene37122.t1 | MTR_2g007010 | 51.087 | 92 | 43 | 1 | 5 | 96 | 376 | 465 | 9.51e-20 | 86.3 |
| MS.gene37122.t1 | MTR_2g007010 | 38.710 | 93 | 57 | 0 | 1 | 93 | 659 | 751 | 2.03e-12 | 65.1 |
| MS.gene37122.t1 | MTR_8g023550 | 38.938 | 113 | 67 | 1 | 1 | 113 | 284 | 394 | 1.00e-19 | 85.5 |
| MS.gene37122.t1 | MTR_2g095320 | 42.857 | 105 | 58 | 1 | 1 | 105 | 280 | 382 | 1.26e-19 | 85.9 |
| MS.gene37122.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 196 | 323 | 1.58e-19 | 85.5 |
| MS.gene37122.t1 | MTR_3g112260 | 38.393 | 112 | 67 | 1 | 1 | 112 | 270 | 379 | 1.76e-19 | 85.1 |
| MS.gene37122.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 146 | 273 | 1.90e-19 | 85.1 |
| MS.gene37122.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 372 | 499 | 2.02e-19 | 85.5 |
| MS.gene37122.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 322 | 449 | 2.14e-19 | 85.1 |
| MS.gene37122.t1 | MTR_8g099605 | 37.069 | 116 | 71 | 1 | 1 | 116 | 545 | 658 | 7.03e-19 | 84.0 |
| MS.gene37122.t1 | MTR_8g099605 | 37.069 | 116 | 71 | 1 | 1 | 116 | 304 | 417 | 9.50e-19 | 83.2 |
| MS.gene37122.t1 | MTR_2g078630 | 44.330 | 97 | 53 | 1 | 1 | 97 | 202 | 297 | 9.26e-18 | 80.5 |
| MS.gene37122.t1 | MTR_2g078630 | 44.330 | 97 | 53 | 1 | 1 | 97 | 730 | 825 | 1.18e-17 | 80.5 |
| MS.gene37122.t1 | MTR_7g099640 | 40.000 | 115 | 67 | 1 | 1 | 115 | 321 | 433 | 1.94e-17 | 79.3 |
| MS.gene37122.t1 | MTR_5g074850 | 39.286 | 112 | 66 | 1 | 1 | 112 | 636 | 745 | 1.97e-17 | 79.7 |
| MS.gene37122.t1 | MTR_1g069105 | 40.000 | 115 | 67 | 1 | 1 | 115 | 322 | 434 | 2.67e-17 | 79.0 |
| MS.gene37122.t1 | MTR_7g088830 | 37.931 | 116 | 68 | 2 | 1 | 114 | 791 | 904 | 3.33e-17 | 79.0 |
| MS.gene37122.t1 | MTR_7g088830 | 32.576 | 132 | 76 | 4 | 1 | 123 | 522 | 649 | 4.65e-11 | 61.2 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 446 | 538 | 5.76e-17 | 78.2 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 270 | 362 | 5.81e-17 | 77.8 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 403 | 495 | 6.25e-17 | 78.2 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 352 | 444 | 6.86e-17 | 77.8 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 420 | 512 | 7.87e-17 | 77.8 |
| MS.gene37122.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 377 | 469 | 8.59e-17 | 77.8 |
| MS.gene37122.t1 | MTR_3g023900 | 48.276 | 87 | 45 | 0 | 10 | 96 | 382 | 468 | 9.34e-17 | 77.8 |
| MS.gene37122.t1 | MTR_7g099640 | 44.211 | 95 | 51 | 1 | 1 | 95 | 321 | 413 | 3.96e-16 | 75.5 |
| MS.gene37122.t1 | MTR_4g094270 | 34.074 | 135 | 75 | 2 | 1 | 129 | 291 | 417 | 1.06e-15 | 74.3 |
| MS.gene37122.t1 | MTR_2g095210 | 35.965 | 114 | 63 | 2 | 1 | 114 | 540 | 643 | 1.09e-14 | 71.6 |
| MS.gene37122.t1 | MTR_3g023890 | 34.637 | 179 | 105 | 5 | 10 | 177 | 237 | 414 | 1.43e-14 | 71.2 |
| MS.gene37122.t1 | MTR_7g088850 | 36.029 | 136 | 82 | 2 | 1 | 136 | 416 | 546 | 4.83e-14 | 69.7 |
| MS.gene37122.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 1.03e-11 | 63.2 |
| MS.gene37122.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 1.03e-11 | 63.2 |
| MS.gene37122.t1 | MTR_3g092080 | 40.625 | 96 | 51 | 3 | 2 | 95 | 217 | 308 | 2.36e-11 | 61.6 |
| MS.gene37122.t1 | MTR_3g092080 | 40.625 | 96 | 51 | 3 | 2 | 95 | 217 | 308 | 2.71e-11 | 61.6 |
| MS.gene37122.t1 | MTR_3g062510 | 32.075 | 106 | 70 | 1 | 1 | 106 | 293 | 396 | 3.18e-11 | 61.2 |
| MS.gene37122.t1 | MTR_8g099065 | 43.902 | 82 | 42 | 2 | 9 | 90 | 676 | 753 | 8.82e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37122.t1 | AT3G02450 | 74.839 | 155 | 39 | 0 | 1 | 155 | 461 | 615 | 1.17e-76 | 241 |
| MS.gene37122.t1 | AT5G58870 | 51.200 | 125 | 57 | 2 | 1 | 123 | 460 | 582 | 2.81e-31 | 119 |
| MS.gene37122.t1 | AT3G47060 | 50.400 | 125 | 58 | 2 | 1 | 123 | 456 | 578 | 1.96e-30 | 117 |
| MS.gene37122.t1 | AT5G15250 | 48.413 | 126 | 63 | 1 | 1 | 126 | 354 | 477 | 3.99e-29 | 113 |
| MS.gene37122.t1 | AT3G16290 | 41.667 | 132 | 75 | 1 | 1 | 132 | 540 | 669 | 1.30e-27 | 108 |
| MS.gene37122.t1 | AT1G50250 | 47.328 | 131 | 67 | 1 | 1 | 131 | 392 | 520 | 1.36e-27 | 108 |
| MS.gene37122.t1 | AT5G53170 | 45.802 | 131 | 69 | 1 | 1 | 131 | 488 | 616 | 2.02e-27 | 108 |
| MS.gene37122.t1 | AT5G42270 | 45.802 | 131 | 69 | 1 | 1 | 131 | 380 | 508 | 7.34e-27 | 106 |
| MS.gene37122.t1 | AT2G29080 | 41.085 | 129 | 76 | 0 | 1 | 129 | 452 | 580 | 9.12e-27 | 106 |
| MS.gene37122.t1 | AT1G07510 | 41.085 | 129 | 76 | 0 | 1 | 129 | 458 | 586 | 1.11e-26 | 106 |
| MS.gene37122.t1 | AT1G06430 | 38.043 | 184 | 100 | 4 | 1 | 173 | 350 | 530 | 2.27e-26 | 105 |
| MS.gene37122.t1 | AT1G06430 | 38.043 | 184 | 100 | 4 | 1 | 173 | 350 | 530 | 2.27e-26 | 105 |
| MS.gene37122.t1 | AT1G06430 | 38.043 | 184 | 100 | 4 | 1 | 173 | 350 | 530 | 2.27e-26 | 105 |
| MS.gene37122.t1 | AT2G30950 | 37.500 | 184 | 101 | 4 | 1 | 173 | 361 | 541 | 3.67e-26 | 104 |
| MS.gene37122.t1 | AT2G30950 | 37.500 | 184 | 101 | 4 | 1 | 173 | 357 | 537 | 3.77e-26 | 104 |
| MS.gene37122.t1 | AT2G30950 | 37.500 | 184 | 101 | 4 | 1 | 173 | 357 | 537 | 3.77e-26 | 104 |
| MS.gene37122.t1 | AT2G30950 | 37.500 | 184 | 101 | 4 | 1 | 173 | 357 | 537 | 3.77e-26 | 104 |
| MS.gene37122.t1 | AT2G26140 | 45.255 | 137 | 70 | 2 | 1 | 137 | 354 | 485 | 1.11e-25 | 103 |
| MS.gene37122.t1 | AT5G15250 | 40.940 | 149 | 63 | 2 | 1 | 126 | 354 | 500 | 9.72e-25 | 100 |
| MS.gene37122.t1 | AT5G64580 | 38.806 | 134 | 79 | 2 | 1 | 131 | 447 | 580 | 2.37e-22 | 94.0 |
| MS.gene37122.t1 | AT5G43010 | 38.346 | 133 | 78 | 2 | 1 | 133 | 270 | 398 | 1.40e-20 | 88.2 |
| MS.gene37122.t1 | AT1G45000 | 38.346 | 133 | 78 | 2 | 1 | 133 | 270 | 398 | 1.55e-20 | 87.8 |
| MS.gene37122.t1 | AT3G56690 | 47.312 | 93 | 47 | 1 | 1 | 93 | 854 | 944 | 1.99e-20 | 88.2 |
| MS.gene37122.t1 | AT3G56690 | 44.792 | 96 | 52 | 1 | 1 | 96 | 512 | 606 | 8.17e-17 | 77.8 |
| MS.gene37122.t1 | AT3G09840 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 3.77e-20 | 87.4 |
| MS.gene37122.t1 | AT3G09840 | 36.842 | 114 | 62 | 2 | 1 | 114 | 612 | 715 | 2.22e-15 | 73.6 |
| MS.gene37122.t1 | AT5G03340 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 3.81e-20 | 87.4 |
| MS.gene37122.t1 | AT5G03340 | 37.374 | 99 | 60 | 1 | 1 | 99 | 611 | 707 | 1.06e-14 | 71.6 |
| MS.gene37122.t1 | AT4G23940 | 37.931 | 116 | 70 | 1 | 1 | 116 | 568 | 681 | 5.91e-20 | 87.0 |
| MS.gene37122.t1 | AT3G05530 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 6.63e-20 | 86.3 |
| MS.gene37122.t1 | AT1G09100 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 1.10e-19 | 85.9 |
| MS.gene37122.t1 | AT1G53750 | 38.793 | 116 | 69 | 1 | 1 | 116 | 299 | 412 | 1.13e-19 | 85.5 |
| MS.gene37122.t1 | AT3G53230 | 41.905 | 105 | 59 | 1 | 1 | 105 | 336 | 438 | 1.86e-19 | 85.5 |
| MS.gene37122.t1 | AT3G53230 | 40.404 | 99 | 57 | 1 | 1 | 99 | 612 | 708 | 1.95e-16 | 76.6 |
| MS.gene37122.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.34e-19 | 84.7 |
| MS.gene37122.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.76e-19 | 84.7 |
| MS.gene37122.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 3.81e-19 | 84.7 |
| MS.gene37122.t1 | AT4G29040 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 1.67e-18 | 82.4 |
| MS.gene37122.t1 | AT2G20140 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 3.79e-18 | 81.3 |
| MS.gene37122.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 3.38e-17 | 79.0 |
| MS.gene37122.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 3.38e-17 | 79.0 |
| MS.gene37122.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 470 | 583 | 3.75e-17 | 79.0 |
| MS.gene37122.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 492 | 605 | 3.86e-17 | 79.0 |
| MS.gene37122.t1 | AT2G03670 | 45.263 | 95 | 50 | 1 | 1 | 95 | 418 | 510 | 1.73e-16 | 77.0 |
| MS.gene37122.t1 | AT2G03670 | 44.086 | 93 | 50 | 1 | 9 | 101 | 164 | 254 | 3.06e-15 | 73.2 |
| MS.gene37122.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 852 | 946 | 1.20e-15 | 74.7 |
| MS.gene37122.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 862 | 956 | 1.32e-15 | 74.3 |
| MS.gene37122.t1 | AT2G03670 | 44.086 | 93 | 50 | 1 | 9 | 101 | 164 | 254 | 3.11e-15 | 73.2 |
| MS.gene37122.t1 | AT5G19990 | 34.109 | 129 | 83 | 1 | 1 | 129 | 293 | 419 | 9.79e-15 | 71.6 |
| MS.gene37122.t1 | AT5G19990 | 34.109 | 129 | 83 | 1 | 1 | 129 | 293 | 419 | 9.79e-15 | 71.6 |
| MS.gene37122.t1 | AT5G19990 | 33.333 | 135 | 76 | 2 | 1 | 129 | 235 | 361 | 9.83e-15 | 71.2 |
| MS.gene37122.t1 | AT5G20000 | 34.884 | 129 | 82 | 1 | 1 | 129 | 293 | 419 | 1.15e-14 | 71.2 |
| MS.gene37122.t1 | AT3G01610 | 40.909 | 132 | 64 | 5 | 10 | 138 | 380 | 500 | 9.02e-13 | 66.2 |
| MS.gene37122.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 3.28e-11 | 61.6 |
| MS.gene37122.t1 | AT3G01610 | 40.769 | 130 | 67 | 4 | 10 | 138 | 380 | 500 | 9.03e-13 | 66.2 |
| MS.gene37122.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 3.35e-11 | 61.6 |
| MS.gene37122.t1 | AT1G05910 | 39.640 | 111 | 66 | 1 | 1 | 111 | 514 | 623 | 1.35e-12 | 65.9 |
| MS.gene37122.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 972 | 1071 | 1.25e-11 | 62.8 |
| MS.gene37122.t1 | AT5G58290 | 33.019 | 106 | 69 | 1 | 1 | 106 | 286 | 389 | 1.28e-11 | 62.8 |
| MS.gene37122.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 963 | 1062 | 1.32e-11 | 62.8 |
Find 54 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTGAAAGAGCAAAATT+TGG | 0.224551 | 6.2:+12107603 | MS.gene37122:CDS |
| CGCTCTATCCACTGAGCTAC+AGG | 0.375810 | 6.2:+12108175 | MS.gene37122:CDS |
| GCATTTGAGAGGAGTTCCTT+TGG | 0.379597 | 6.2:+12106467 | MS.gene37122:CDS |
| TGTGGCAAGGGAAGATATAA+TGG | 0.388759 | 6.2:+12107578 | MS.gene37122:CDS |
| TTTCTCCTTCCTTCTTCGTC+AGG | 0.391335 | 6.2:-12106432 | None:intergenic |
| CCCTTGGATGCCATCATTGA+TGG | 0.392559 | 6.2:+12107683 | MS.gene37122:CDS |
| ATTGACGATGTTTGCAAGAT+CGG | 0.426563 | 6.2:-12106550 | None:intergenic |
| ACTGAGCTACAGGCGCTGTC+TGG | 0.459515 | 6.2:+12108185 | MS.gene37122:CDS |
| AGGGCTGGATCCAAGGCTTC+TGG | 0.459623 | 6.2:-12106366 | None:intergenic |
| CCCATCAATGATGGCATCCA+AGG | 0.469878 | 6.2:-12107684 | None:intergenic |
| CATTGATGGGAAGAAGTGAT+AGG | 0.477672 | 6.2:+12107697 | MS.gene37122:CDS |
| CGACCGGGACGACACAGGGC+TGG | 0.495070 | 6.2:-12106381 | None:intergenic |
| AGCTTGGTAAGCTGTTCCCT+TGG | 0.496185 | 6.2:+12107667 | MS.gene37122:CDS |
| GACATACAAGGACCACCATT+AGG | 0.504087 | 6.2:+12107729 | MS.gene37122:CDS |
| TCTCGAGGAAAGTATATGTA+GGG | 0.504433 | 6.2:+12106406 | MS.gene37122:CDS |
| ACGACACAGGGCTGGATCCA+AGG | 0.506054 | 6.2:-12106373 | None:intergenic |
| GAGAGGAGTTCCTTTGGAGG+AGG | 0.513124 | 6.2:+12106473 | MS.gene37122:CDS |
| AAACCTACGACCTTCTGCTT+AGG | 0.514295 | 6.2:+12108145 | MS.gene37122:CDS |
| GAATCAATGATAAGCAACTA+AGG | 0.515226 | 6.2:+12107625 | MS.gene37122:CDS |
| CCTTGGATGCCATCATTGAT+GGG | 0.519963 | 6.2:+12107684 | MS.gene37122:CDS |
| AGAAACGACCGGGACGACAC+AGG | 0.521094 | 6.2:-12106386 | None:intergenic |
| GAAACGACCGGGACGACACA+GGG | 0.522419 | 6.2:-12106385 | None:intergenic |
| GATCCAGCCCTGTGTCGTCC+CGG | 0.528518 | 6.2:+12106378 | MS.gene37122:CDS |
| TCACTTCTTCCCATCAATGA+TGG | 0.540303 | 6.2:-12107693 | None:intergenic |
| TACTAACCGACCAGAAGCCT+TGG | 0.544542 | 6.2:+12106356 | MS.gene37122:CDS |
| TTAATTGCCACAGTTACTGA+TGG | 0.552662 | 6.2:+12106516 | MS.gene37122:CDS |
| TTTGAGAGGAGTTCCTTTGG+AGG | 0.552837 | 6.2:+12106470 | MS.gene37122:CDS |
| TTCTCGAGGAAAGTATATGT+AGG | 0.558873 | 6.2:+12106405 | MS.gene37122:CDS |
| TACTTTCCTCGAGAAACGAC+CGG | 0.560952 | 6.2:-12106397 | None:intergenic |
| ACTTTCCTCGAGAAACGACC+GGG | 0.571156 | 6.2:-12106396 | None:intergenic |
| ATATTAGCTGTGCATTTGAG+AGG | 0.572900 | 6.2:+12106456 | MS.gene37122:CDS |
| AGTAAAATAAGCAAGGAGCT+TGG | 0.574154 | 6.2:+12107651 | MS.gene37122:CDS |
| TTTCCTAAGCAGAAGGTCGT+AGG | 0.587678 | 6.2:-12108148 | None:intergenic |
| GTAGGGGAACCTGACGAAGA+AGG | 0.589232 | 6.2:+12106423 | MS.gene37122:CDS |
| AGGTAGTGAAACTGTGGCAA+GGG | 0.592368 | 6.2:+12107566 | MS.gene37122:intron |
| AAGGTCTAGTAAAATAAGCA+AGG | 0.598431 | 6.2:+12107644 | MS.gene37122:CDS |
| GTCGTCCCGGTCGTTTCTCG+AGG | 0.603735 | 6.2:+12106391 | MS.gene37122:CDS |
| AGGAAACAAGATGACATACA+AGG | 0.608187 | 6.2:+12107717 | MS.gene37122:CDS |
| GGGAACCTGACGAAGAAGGA+AGG | 0.608258 | 6.2:+12106427 | MS.gene37122:CDS |
| ATGTTAGCATCCTCCTCCAA+AGG | 0.613955 | 6.2:-12106483 | None:intergenic |
| CAGGTAGTGAAACTGTGGCA+AGG | 0.614725 | 6.2:+12107565 | MS.gene37122:intron |
| GCGTCTGTTTCCTAAGCAGA+AGG | 0.615393 | 6.2:-12108155 | None:intergenic |
| GCTTTGCTCGCTGCTCGAAG+AGG | 0.615478 | 6.2:+12106579 | MS.gene37122:CDS |
| CCATCAATGATGGCATCCAA+GGG | 0.617279 | 6.2:-12107683 | None:intergenic |
| ACAGTTACTGATGGTCTCGT+AGG | 0.621604 | 6.2:+12106525 | MS.gene37122:CDS |
| CAATAATAATAACCTAATGG+TGG | 0.640587 | 6.2:-12107741 | None:intergenic |
| CTCGAGGAAAGTATATGTAG+GGG | 0.655243 | 6.2:+12106407 | MS.gene37122:CDS |
| CTGGATCCAAGGCTTCTGGT+CGG | 0.665200 | 6.2:-12106362 | None:intergenic |
| AGACAGCGCCTGTAGCTCAG+TGG | 0.665739 | 6.2:-12108183 | None:intergenic |
| CTCTGCAGGTAGTGAAACTG+TGG | 0.666734 | 6.2:+12107560 | MS.gene37122:intron |
| TACGAGACCATCAGTAACTG+TGG | 0.680129 | 6.2:-12106523 | None:intergenic |
| ATTTGAATCAGAAATGAGAG+TGG | 0.693418 | 6.2:+12106320 | MS.gene37122:CDS |
| TAGTTGCTGACAGAAATGGA+TGG | 0.707484 | 6.2:+12106297 | None:intergenic |
| TCTTCGAGCAGCGAGCAAAG+CGG | 0.723854 | 6.2:-12106577 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATCAATTTCTATAAAA+GGG | - | chr6.2:12107326-12107345 | None:intergenic | 10.0% |
| !!! | AAAAAACTAATTCATTTTAT+AGG | - | chr6.2:12107834-12107853 | None:intergenic | 10.0% |
| !! | AAAAATATCATTTAATGTGA+AGG | - | chr6.2:12107482-12107501 | None:intergenic | 15.0% |
| !! | ATTCAATAATAATAACCTAA+TGG | - | chr6.2:12107747-12107766 | None:intergenic | 15.0% |
| !! | CACTTAATTCTATATAAATT+AGG | + | chr6.2:12106722-12106741 | MS.gene37122:intron | 15.0% |
| !! | GTATAATCAATTTCTATAAA+AGG | - | chr6.2:12107327-12107346 | None:intergenic | 15.0% |
| !! | TTATTATTGAATTCATGAAT+TGG | + | chr6.2:12107755-12107774 | MS.gene37122:intron | 15.0% |
| !!! | ATTCTATATAAATTAGGTTT+TGG | + | chr6.2:12106728-12106747 | MS.gene37122:intron | 15.0% |
| !!! | GAATTAGTTTTTTTTGATTT+TGG | + | chr6.2:12107841-12107860 | MS.gene37122:intron | 15.0% |
| !! | AATTAAGTGTCACAAATATA+CGG | - | chr6.2:12106711-12106730 | None:intergenic | 20.0% |
| !! | TTATCACTTCAATATTTGAA+AGG | + | chr6.2:12107893-12107912 | MS.gene37122:intron | 20.0% |
| !!! | ACTTTATCTTTTGTTATAAG+AGG | + | chr6.2:12107130-12107149 | MS.gene37122:intron | 20.0% |
| !!! | CTTTATCTTTTGTTATAAGA+GGG | + | chr6.2:12107131-12107150 | MS.gene37122:intron | 20.0% |
| !!! | TTTATCTTTTGTTATAAGAG+GGG | + | chr6.2:12107132-12107151 | MS.gene37122:intron | 20.0% |
| ! | ACAAATATCACTAAATGGAA+GGG | - | chr6.2:12107931-12107950 | None:intergenic | 25.0% |
| ! | ATTGTACAAGTAAATTTGAC+AGG | - | chr6.2:12107785-12107804 | None:intergenic | 25.0% |
| ! | CAATAATAATAACCTAATGG+TGG | - | chr6.2:12107744-12107763 | None:intergenic | 25.0% |
| !! | AAATATGCGAATTCCAATTT+TGG | - | chr6.2:12108005-12108024 | None:intergenic | 25.0% |
| !! | TAAAATCAAAGAGTGTATGA+AGG | + | chr6.2:12106811-12106830 | MS.gene37122:intron | 25.0% |
| !! | TCTGAAGTAGTTATATCTAA+GGG | + | chr6.2:12106944-12106963 | MS.gene37122:intron | 25.0% |
| !! | TCTTTTACATACACCAAAAT+TGG | + | chr6.2:12107989-12108008 | MS.gene37122:intron | 25.0% |
| !!! | AAAAGCATTTATGCTATAAG+TGG | + | chr6.2:12107362-12107381 | MS.gene37122:intron | 25.0% |
| AAGGTCTAGTAAAATAAGCA+AGG | + | chr6.2:12107644-12107663 | MS.gene37122:CDS | 30.0% | |
| ATTCGCATATTTGTCAATAG+AGG | + | chr6.2:12108013-12108032 | MS.gene37122:intron | 30.0% | |
| ATTTGAATCAGAAATGAGAG+TGG | + | chr6.2:12106320-12106339 | MS.gene37122:CDS | 30.0% | |
| CATTCACCAATGATAATTCT+TGG | + | chr6.2:12106647-12106666 | MS.gene37122:intron | 30.0% | |
| GAATCAATGATAAGCAACTA+AGG | + | chr6.2:12107625-12107644 | MS.gene37122:CDS | 30.0% | |
| GACAAATATCACTAAATGGA+AGG | - | chr6.2:12107932-12107951 | None:intergenic | 30.0% | |
| GCTATTGAAAGAGCAAAATT+TGG | + | chr6.2:12107603-12107622 | MS.gene37122:CDS | 30.0% | |
| GGTTGACAAATATCACTAAA+TGG | - | chr6.2:12107936-12107955 | None:intergenic | 30.0% | |
| GTCTAACCAAGAATTATCAT+TGG | - | chr6.2:12106656-12106675 | None:intergenic | 30.0% | |
| TCATTTAATGTGAAGGTGAA+AGG | - | chr6.2:12107475-12107494 | None:intergenic | 30.0% | |
| !! | AGCTGATTTTATATGCTATC+TGG | + | chr6.2:12106856-12106875 | MS.gene37122:intron | 30.0% |
| !! | CTCTGAAGTAGTTATATCTA+AGG | + | chr6.2:12106943-12106962 | MS.gene37122:intron | 30.0% |
| !! | GCTGATTTTATATGCTATCT+GGG | + | chr6.2:12106857-12106876 | MS.gene37122:intron | 30.0% |
| AGGAAACAAGATGACATACA+AGG | + | chr6.2:12107717-12107736 | MS.gene37122:CDS | 35.0% | |
| AGTAAAATAAGCAAGGAGCT+TGG | + | chr6.2:12107651-12107670 | MS.gene37122:CDS | 35.0% | |
| ATACTCGTTAGACACATAAG+TGG | - | chr6.2:12107957-12107976 | None:intergenic | 35.0% | |
| ATATTAGCTGTGCATTTGAG+AGG | + | chr6.2:12106456-12106475 | MS.gene37122:CDS | 35.0% | |
| ATTGACGATGTTTGCAAGAT+CGG | - | chr6.2:12106553-12106572 | None:intergenic | 35.0% | |
| ATTTCTATAAAAGGGCAACC+CGG | - | chr6.2:12107318-12107337 | None:intergenic | 35.0% | |
| TATGCTATCTGGGAAACTTA+TGG | + | chr6.2:12106867-12106886 | MS.gene37122:intron | 35.0% | |
| TTAATTGCCACAGTTACTGA+TGG | + | chr6.2:12106516-12106535 | MS.gene37122:CDS | 35.0% | |
| ! | ACGTGTTTGAGTTAACTATG+TGG | + | chr6.2:12106980-12106999 | MS.gene37122:intron | 35.0% |
| ! | TCTCGAGGAAAGTATATGTA+GGG | + | chr6.2:12106406-12106425 | MS.gene37122:CDS | 35.0% |
| ! | TTCTCGAGGAAAGTATATGT+AGG | + | chr6.2:12106405-12106424 | MS.gene37122:CDS | 35.0% |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr6.2:12107220-12107239 | MS.gene37122:intron | 40.0% | |
| AATCCATATTTGCACTCTGC+AGG | + | chr6.2:12107546-12107565 | MS.gene37122:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr6.2:12107221-12107240 | MS.gene37122:intron | 40.0% | |
| CATTGATGGGAAGAAGTGAT+AGG | + | chr6.2:12107697-12107716 | MS.gene37122:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr6.2:12107252-12107271 | MS.gene37122:intron | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr6.2:12107226-12107245 | MS.gene37122:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr6.2:12107177-12107196 | MS.gene37122:intron | 40.0% | |
| TCACTTCTTCCCATCAATGA+TGG | - | chr6.2:12107696-12107715 | None:intergenic | 40.0% | |
| TGAAGGTGAAAGGTCAATGA+AGG | - | chr6.2:12107465-12107484 | None:intergenic | 40.0% | |
| TGTGGCAAGGGAAGATATAA+TGG | + | chr6.2:12107578-12107597 | MS.gene37122:CDS | 40.0% | |
| TGTTATAAGAGGGGTAACCT+TGG | + | chr6.2:12107141-12107160 | MS.gene37122:intron | 40.0% | |
| ! | CTCGAGGAAAGTATATGTAG+GGG | + | chr6.2:12106407-12106426 | MS.gene37122:CDS | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr6.2:12107228-12107247 | None:intergenic | 40.0% |
| AAACCTACGACCTTCTGCTT+AGG | + | chr6.2:12108145-12108164 | MS.gene37122:CDS | 45.0% | |
| AAGCAGTTGTGAGGCTACTT+TGG | + | chr6.2:12107006-12107025 | MS.gene37122:intron | 45.0% | |
| ACAGTTACTGATGGTCTCGT+AGG | + | chr6.2:12106525-12106544 | MS.gene37122:CDS | 45.0% | |
| ACTAAAGCTCCCGCATATGT+AGG | - | chr6.2:12107292-12107311 | None:intergenic | 45.0% | |
| AGGTAGTGAAACTGTGGCAA+GGG | + | chr6.2:12107566-12107585 | MS.gene37122:intron | 45.0% | |
| ATGTTAGCATCCTCCTCCAA+AGG | - | chr6.2:12106486-12106505 | None:intergenic | 45.0% | |
| CCATCAATGATGGCATCCAA+GGG | - | chr6.2:12107686-12107705 | None:intergenic | 45.0% | |
| CCTTGGATGCCATCATTGAT+GGG | + | chr6.2:12107684-12107703 | MS.gene37122:CDS | 45.0% | |
| CTAAAGCTCCCGCATATGTA+GGG | - | chr6.2:12107291-12107310 | None:intergenic | 45.0% | |
| CTACCTGCAGAGTGCAAATA+TGG | - | chr6.2:12107552-12107571 | None:intergenic | 45.0% | |
| GAAAGGTCAATGAAGGCAGA+GGG | - | chr6.2:12107458-12107477 | None:intergenic | 45.0% | |
| GACATACAAGGACCACCATT+AGG | + | chr6.2:12107729-12107748 | MS.gene37122:CDS | 45.0% | |
| GCATTTGAGAGGAGTTCCTT+TGG | + | chr6.2:12106467-12106486 | MS.gene37122:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr6.2:12107251-12107270 | MS.gene37122:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr6.2:12107248-12107267 | MS.gene37122:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr6.2:12107183-12107202 | MS.gene37122:intron | 45.0% | |
| TAAACATCTTCATACGCGCC+AGG | + | chr6.2:12108114-12108133 | MS.gene37122:intron | 45.0% | |
| TACGAGACCATCAGTAACTG+TGG | - | chr6.2:12106526-12106545 | None:intergenic | 45.0% | |
| TACTTTCCTCGAGAAACGAC+CGG | - | chr6.2:12106400-12106419 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr6.2:12107184-12107203 | MS.gene37122:intron | 45.0% | |
| TGAAAGGTCAATGAAGGCAG+AGG | - | chr6.2:12107459-12107478 | None:intergenic | 45.0% | |
| TTTCCTAAGCAGAAGGTCGT+AGG | - | chr6.2:12108151-12108170 | None:intergenic | 45.0% | |
| TTTCTCCTTCCTTCTTCGTC+AGG | - | chr6.2:12106435-12106454 | None:intergenic | 45.0% | |
| TTTGAGAGGAGTTCCTTTGG+AGG | + | chr6.2:12106470-12106489 | MS.gene37122:CDS | 45.0% | |
| ! | TGGTCAGCTAAGAGTGTATG+TGG | - | chr6.2:12107405-12107424 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr6.2:12107217-12107236 | None:intergenic | 45.0% |
| ACTTTCCTCGAGAAACGACC+GGG | - | chr6.2:12106399-12106418 | None:intergenic | 50.0% | |
| AGCTTGGTAAGCTGTTCCCT+TGG | + | chr6.2:12107667-12107686 | MS.gene37122:CDS | 50.0% | |
| ATCTTCATACGCGCCAGGTA+GGG | + | chr6.2:12108119-12108138 | MS.gene37122:intron | 50.0% | |
| ATGTGGCACAAGCAGTTGTG+AGG | + | chr6.2:12106997-12107016 | MS.gene37122:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr6.2:12107161-12107180 | None:intergenic | 50.0% | |
| CAGGTAGTGAAACTGTGGCA+AGG | + | chr6.2:12107565-12107584 | MS.gene37122:intron | 50.0% | |
| CCCATCAATGATGGCATCCA+AGG | - | chr6.2:12107687-12107706 | None:intergenic | 50.0% | |
| CCCTTGGATGCCATCATTGA+TGG | + | chr6.2:12107683-12107702 | MS.gene37122:CDS | 50.0% | |
| CTCTGCAGGTAGTGAAACTG+TGG | + | chr6.2:12107560-12107579 | MS.gene37122:intron | 50.0% | |
| GCGTCTGTTTCCTAAGCAGA+AGG | - | chr6.2:12108158-12108177 | None:intergenic | 50.0% | |
| TACTAACCGACCAGAAGCCT+TGG | + | chr6.2:12106356-12106375 | MS.gene37122:CDS | 50.0% | |
| !! | AAGCAGAAGGGGTGTCTGTA+GGG | - | chr6.2:12107435-12107454 | None:intergenic | 50.0% |
| AAGGCAGAGGGAAGCAGAAG+GGG | - | chr6.2:12107446-12107465 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr6.2:12107196-12107215 | MS.gene37122:intron | 55.0% | |
| CATATGTAGGGTCCGGGAAG+GGG | - | chr6.2:12107279-12107298 | None:intergenic | 55.0% | |
| CATCTTCATACGCGCCAGGT+AGG | + | chr6.2:12108118-12108137 | MS.gene37122:intron | 55.0% | |
| CGCTCTATCCACTGAGCTAC+AGG | + | chr6.2:12108175-12108194 | MS.gene37122:CDS | 55.0% | |
| CTGGATCCAAGGCTTCTGGT+CGG | - | chr6.2:12106365-12106384 | None:intergenic | 55.0% | |
| CTTCCCGGACCCTACATATG+CGG | + | chr6.2:12107279-12107298 | MS.gene37122:intron | 55.0% | |
| GAAGGCAGAGGGAAGCAGAA+GGG | - | chr6.2:12107447-12107466 | None:intergenic | 55.0% | |
| GCATATGTAGGGTCCGGGAA+GGG | - | chr6.2:12107280-12107299 | None:intergenic | 55.0% | |
| GGGAACCTGACGAAGAAGGA+AGG | + | chr6.2:12106427-12106446 | MS.gene37122:CDS | 55.0% | |
| GGTGTCTGTAGGGAGGCTAA+TGG | - | chr6.2:12107425-12107444 | None:intergenic | 55.0% | |
| GTAGGGGAACCTGACGAAGA+AGG | + | chr6.2:12106423-12106442 | MS.gene37122:CDS | 55.0% | |
| TCGTAGGTTTGACCCCTACC+TGG | - | chr6.2:12108135-12108154 | None:intergenic | 55.0% | |
| TCTTCATACGCGCCAGGTAG+GGG | + | chr6.2:12108120-12108139 | MS.gene37122:intron | 55.0% | |
| TCTTCGAGCAGCGAGCAAAG+CGG | - | chr6.2:12106580-12106599 | None:intergenic | 55.0% | |
| TGAAGGCAGAGGGAAGCAGA+AGG | - | chr6.2:12107448-12107467 | None:intergenic | 55.0% | |
| TTCCCGGACCCTACATATGC+GGG | + | chr6.2:12107280-12107299 | MS.gene37122:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr6.2:12107296-12107315 | MS.gene37122:intron | 55.0% |
| ! | GAGAGGAGTTCCTTTGGAGG+AGG | + | chr6.2:12106473-12106492 | MS.gene37122:CDS | 55.0% |
| !! | GAAGCAGAAGGGGTGTCTGT+AGG | - | chr6.2:12107436-12107455 | None:intergenic | 55.0% |
| ACGACACAGGGCTGGATCCA+AGG | - | chr6.2:12106376-12106395 | None:intergenic | 60.0% | |
| AGAAACGACCGGGACGACAC+AGG | - | chr6.2:12106389-12106408 | None:intergenic | 60.0% | |
| AGACAGCGCCTGTAGCTCAG+TGG | - | chr6.2:12108186-12108205 | None:intergenic | 60.0% | |
| AGGGCTGGATCCAAGGCTTC+TGG | - | chr6.2:12106369-12106388 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr6.2:12107150-12107169 | MS.gene37122:intron | 60.0% | |
| CGCATATGTAGGGTCCGGGA+AGG | - | chr6.2:12107281-12107300 | None:intergenic | 60.0% | |
| CTCCCGCATATGTAGGGTCC+GGG | - | chr6.2:12107285-12107304 | None:intergenic | 60.0% | |
| GAAACGACCGGGACGACACA+GGG | - | chr6.2:12106388-12106407 | None:intergenic | 60.0% | |
| GCTCCCGCATATGTAGGGTC+CGG | - | chr6.2:12107286-12107305 | None:intergenic | 60.0% | |
| GCTTTGCTCGCTGCTCGAAG+AGG | + | chr6.2:12106579-12106598 | MS.gene37122:CDS | 60.0% | |
| ! | ACTGAGCTACAGGCGCTGTC+TGG | + | chr6.2:12108185-12108204 | MS.gene37122:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr6.2:12107264-12107283 | MS.gene37122:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr6.2:12107297-12107316 | MS.gene37122:intron | 60.0% |
| !! | CAGAAGGGGTGTCTGTAGGG+AGG | - | chr6.2:12107432-12107451 | None:intergenic | 60.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr6.2:12107266-12107285 | None:intergenic | 65.0% | |
| GATCCAGCCCTGTGTCGTCC+CGG | + | chr6.2:12106378-12106397 | MS.gene37122:CDS | 65.0% | |
| GTCGTCCCGGTCGTTTCTCG+AGG | + | chr6.2:12106391-12106410 | MS.gene37122:CDS | 65.0% | |
| CGACCGGGACGACACAGGGC+TGG | - | chr6.2:12106384-12106403 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 12106312 | 12108218 | 12106312 | ID=MS.gene37122 |
| chr6.2 | mRNA | 12106312 | 12108218 | 12106312 | ID=MS.gene37122.t1;Parent=MS.gene37122 |
| chr6.2 | exon | 12106312 | 12106600 | 12106312 | ID=MS.gene37122.t1.exon1;Parent=MS.gene37122.t1 |
| chr6.2 | CDS | 12106312 | 12106600 | 12106312 | ID=cds.MS.gene37122.t1;Parent=MS.gene37122.t1 |
| chr6.2 | exon | 12107568 | 12107750 | 12107568 | ID=MS.gene37122.t1.exon2;Parent=MS.gene37122.t1 |
| chr6.2 | CDS | 12107568 | 12107750 | 12107568 | ID=cds.MS.gene37122.t1;Parent=MS.gene37122.t1 |
| chr6.2 | exon | 12108136 | 12108218 | 12108136 | ID=MS.gene37122.t1.exon3;Parent=MS.gene37122.t1 |
| chr6.2 | CDS | 12108136 | 12108218 | 12108136 | ID=cds.MS.gene37122.t1;Parent=MS.gene37122.t1 |
| Gene Sequence |
| Protein sequence |
