Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37282.t1 | XP_013467665.1 | 96.6 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 3.10E-160 | 574.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37282.t1 | Q7F8R0 | 58.9 | 299 | 100 | 7 | 4 | 287 | 6 | 296 | 3.4e-86 | 319.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37282.t1 | A0A072VIQ3 | 96.6 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 2.3e-160 | 574.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37282.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene37282 | -0.841187 | 5.53E-58 | -1.69E-46 |
| MS.gene049669 | MS.gene37282 | -0.827657 | 1.39E-54 | -1.69E-46 |
| MS.gene050026 | MS.gene37282 | -0.810573 | 1.08E-50 | -1.69E-46 |
| MS.gene050201 | MS.gene37282 | -0.821816 | 3.30E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene37282 | -0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene37282 | -0.810184 | 1.31E-50 | -1.69E-46 |
| MS.gene051832 | MS.gene37282 | -0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene37282 | 0.803453 | 3.46E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene37282 | 0.829754 | 4.31E-55 | -1.69E-46 |
| MS.gene052358 | MS.gene37282 | 0.818004 | 2.46E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene37282 | -0.822542 | 2.24E-53 | -1.69E-46 |
| MS.gene052493 | MS.gene37282 | -0.801123 | 1.04E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene37282 | -0.808964 | 2.39E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene37282 | -0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene37282 | -0.853517 | 2.27E-61 | -1.69E-46 |
| MS.gene052584 | MS.gene37282 | -0.831834 | 1.33E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene37282 | -0.832441 | 9.43E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene37282 | 0.875522 | 2.88E-68 | -1.69E-46 |
| MS.gene053054 | MS.gene37282 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene37282 | -0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene37282 | -0.820822 | 5.60E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene37282 | -0.822014 | 2.97E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene37282 | -0.848328 | 6.57E-60 | -1.69E-46 |
| MS.gene054291 | MS.gene37282 | 0.854682 | 1.05E-61 | -1.69E-46 |
| MS.gene054468 | MS.gene37282 | -0.835602 | 1.53E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene37282 | -0.803099 | 4.10E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene37282 | -0.821364 | 4.20E-53 | -1.69E-46 |
| MS.gene055453 | MS.gene37282 | 0.808732 | 2.68E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene37282 | -0.801252 | 9.83E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene37282 | -0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene37282 | -0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene37282 | -0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene37282 | -0.818322 | 2.08E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene37282 | -0.804883 | 1.74E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene37282 | -0.830973 | 2.17E-55 | -1.69E-46 |
| MS.gene057598 | MS.gene37282 | -0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene057921 | MS.gene37282 | -0.805653 | 1.20E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene37282 | -0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene37282 | -0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene37282 | -0.82475 | 6.81E-54 | -1.69E-46 |
| MS.gene060137 | MS.gene37282 | 0.80349 | 3.40E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene37282 | -0.821267 | 4.42E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene37282 | -0.835211 | 1.91E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene37282 | -0.807065 | 6.06E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene37282 | 0.858345 | 8.78E-63 | -1.69E-46 |
| MS.gene060879 | MS.gene37282 | -0.840209 | 9.98E-58 | -1.69E-46 |
| MS.gene061040 | MS.gene37282 | 0.827363 | 1.63E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37282.t1 | MTR_1g053960 | 96.587 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 0.0 | 575 |
| MS.gene37282.t1 | MTR_1g053960 | 96.035 | 227 | 6 | 1 | 67 | 290 | 1 | 227 | 7.79e-159 | 441 |
| MS.gene37282.t1 | MTR_7g093130 | 70.395 | 304 | 70 | 9 | 1 | 287 | 1 | 301 | 9.58e-136 | 386 |
| MS.gene37282.t1 | MTR_1g116940 | 58.462 | 260 | 95 | 6 | 40 | 290 | 3 | 258 | 6.89e-100 | 293 |
| MS.gene37282.t1 | MTR_7g093130 | 70.940 | 234 | 52 | 7 | 67 | 287 | 1 | 231 | 8.40e-100 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37282.t1 | AT3G12130 | 51.495 | 301 | 81 | 9 | 1 | 290 | 1 | 247 | 3.69e-82 | 248 |
| MS.gene37282.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 10 | 217 | 1.90e-58 | 186 |
| MS.gene37282.t1 | AT5G06770 | 71.698 | 53 | 15 | 0 | 20 | 72 | 4 | 56 | 7.50e-21 | 89.0 |
| MS.gene37282.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 32 | 239 | 2.96e-58 | 187 |
| MS.gene37282.t1 | AT5G06770 | 67.949 | 78 | 19 | 2 | 1 | 72 | 1 | 78 | 9.04e-29 | 110 |
| MS.gene37282.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37282.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37282.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37282.t1 | AT3G12130 | 63.924 | 158 | 49 | 4 | 139 | 290 | 20 | 175 | 2.17e-53 | 172 |
| MS.gene37282.t1 | AT5G06770 | 59.333 | 150 | 56 | 4 | 141 | 290 | 23 | 167 | 3.66e-51 | 166 |
Find 96 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCAATGTTTCTAAGATT+TGG | 0.218015 | 1.2:-39854733 | None:intergenic |
| TCTGCTGAAGGCTGCAAATT+TGG | 0.233846 | 1.2:+39854427 | MS.gene37282:CDS |
| TTGGTCTTGATGTTTCTTCC+AGG | 0.287578 | 1.2:-39854880 | None:intergenic |
| ATGTTTCTTCCAGGTGCGGC+TGG | 0.289209 | 1.2:-39854871 | None:intergenic |
| CCCATTCACCATGGGCAAAA+TGG | 0.307326 | 1.2:-39854459 | None:intergenic |
| GTTCAATGTTTCTAAGATTT+GGG | 0.309393 | 1.2:-39854732 | None:intergenic |
| GATCAGTGTAGAAGCTTCTT+TGG | 0.311263 | 1.2:+39854618 | MS.gene37282:CDS |
| GGAGCACCCAGGGTGGATTT+AGG | 0.312131 | 1.2:-39854835 | None:intergenic |
| TAAGATTTGGGTCAGATTCA+TGG | 0.329032 | 1.2:-39854720 | None:intergenic |
| CAGGTTTAAGATTCATCATC+TGG | 0.330164 | 1.2:-39854318 | None:intergenic |
| ACTGATCTTGGCAGTGGAAT+TGG | 0.339065 | 1.2:-39854602 | None:intergenic |
| GCTAAAGGATCCTGCACATT+TGG | 0.348312 | 1.2:+39854919 | MS.gene37282:CDS |
| CACTTCTCACATCATGTTCC+CGG | 0.349238 | 1.2:+39854277 | MS.gene37282:CDS |
| ATCAACCCTCCCTCGTTTGC+GGG | 0.354317 | 1.2:-39851375 | None:intergenic |
| GGTCGAGTTGAGGCTCCTTC+TGG | 0.361759 | 1.2:+39854556 | MS.gene37282:CDS |
| TTGAAAATTTGACTCCTGTT+TGG | 0.371380 | 1.2:-39854690 | None:intergenic |
| AGGGTTGATGCTGCTGTTAA+TGG | 0.373294 | 1.2:+39851389 | MS.gene37282:CDS |
| TCTTTGGCTGGAGCTATCAT+TGG | 0.389153 | 1.2:+39854634 | MS.gene37282:CDS |
| GTTGAGGCTCCTTCTGGTCT+AGG | 0.393390 | 1.2:+39854562 | MS.gene37282:CDS |
| TCCACCCTGGGTGCTCCTGC+TGG | 0.401990 | 1.2:+39854841 | MS.gene37282:CDS |
| AGCATTGCTGGCTGTCCATT+TGG | 0.402746 | 1.2:+39854244 | MS.gene37282:intron |
| GGTGGGGCGGCAACATTTCT+AGG | 0.421558 | 1.2:-39854349 | None:intergenic |
| GGTCTAGGCGGTACTAGCTT+TGG | 0.431440 | 1.2:+39854577 | MS.gene37282:CDS |
| AGAAGCTTCTACACTGATCT+TGG | 0.443492 | 1.2:-39854614 | None:intergenic |
| AGCAAAATTCTCACACAGCT+TGG | 0.448378 | 1.2:-39854899 | None:intergenic |
| GCCGCTGAATTGCGAAAGAT+AGG | 0.451271 | 1.2:+39854967 | MS.gene37282:CDS |
| GGTGGTGGCCCAGCCGCACC+TGG | 0.454343 | 1.2:+39854862 | MS.gene37282:CDS |
| CTGGGTGCTCCTGCTGGTGG+TGG | 0.456820 | 1.2:+39854847 | MS.gene37282:CDS |
| GCAACAGAAATGGACTCAAC+TGG | 0.458170 | 1.2:+39852426 | MS.gene37282:intron |
| CATCAACCCTCCCTCGTTTG+CGG | 0.460993 | 1.2:-39851376 | None:intergenic |
| CTTAGAAACATTGAACTTGA+GGG | 0.465557 | 1.2:+39854739 | MS.gene37282:CDS |
| GGCATACGACCAACATTTGT+AGG | 0.466912 | 1.2:-39854532 | None:intergenic |
| ACAAATGTTGGTCGTATGCC+TGG | 0.469504 | 1.2:+39854535 | MS.gene37282:CDS |
| GCGGCTGGGCCACCACCAGC+AGG | 0.473223 | 1.2:-39854856 | None:intergenic |
| TTCGCAATTCAGCGGCTCCA+TGG | 0.475467 | 1.2:-39854960 | None:intergenic |
| AGTGTAGAAGCTTCTTTGGC+TGG | 0.476113 | 1.2:+39854622 | MS.gene37282:CDS |
| CCAACATTTGTAGGTGCCAT+TGG | 0.476227 | 1.2:-39854523 | None:intergenic |
| AAGCAGATATGTCGCCAAAC+AGG | 0.477279 | 1.2:+39854676 | MS.gene37282:CDS |
| TGTTTCTTCCAGGTGCGGCT+GGG | 0.483249 | 1.2:-39854870 | None:intergenic |
| TGCCCCACCTAAATCCACCC+TGG | 0.484995 | 1.2:+39854828 | MS.gene37282:CDS |
| TCATCAACTGATGGAGCAAA+AGG | 0.487156 | 1.2:-39854493 | None:intergenic |
| AAGTGACAACCCTCACCAAA+TGG | 0.487932 | 1.2:-39854259 | None:intergenic |
| TCGCAATTCAGCGGCTCCAT+GGG | 0.491844 | 1.2:-39854959 | None:intergenic |
| GCCCCACCTAAATCCACCCT+GGG | 0.494162 | 1.2:+39854829 | MS.gene37282:CDS |
| TGCTGGCTGTCCATTTGGTG+AGG | 0.513418 | 1.2:+39854249 | MS.gene37282:CDS |
| GGCTGGAGCTATCATTGGAA+AGG | 0.517932 | 1.2:+39854639 | MS.gene37282:CDS |
| CCATTGTTAGAGACTGGTGG+TGG | 0.518004 | 1.2:-39854367 | None:intergenic |
| ACATTTCTAGGAGGTGCAGC+AGG | 0.522238 | 1.2:-39854337 | None:intergenic |
| GCTGGCTGTCCATTTGGTGA+GGG | 0.526668 | 1.2:+39854250 | MS.gene37282:CDS |
| TCTTAGAAACATTGAACTTG+AGG | 0.528176 | 1.2:+39854738 | MS.gene37282:CDS |
| ACATCTTTCTCCAAATGTGC+AGG | 0.531941 | 1.2:-39854929 | None:intergenic |
| ACCCTGGGTGCTCCTGCTGG+TGG | 0.535033 | 1.2:+39854844 | MS.gene37282:CDS |
| GCTGGAGCTATCATTGGAAA+GGG | 0.536163 | 1.2:+39854640 | MS.gene37282:CDS |
| CACCCAGGGTGGATTTAGGT+GGG | 0.536478 | 1.2:-39854831 | None:intergenic |
| ACCGAGTTCCCATTCACCAT+GGG | 0.537718 | 1.2:-39854467 | None:intergenic |
| GGCAACGGCATTATAACCAC+CGG | 0.537881 | 1.2:-39854296 | None:intergenic |
| ACCACCAGCAGGAGCACCCA+GGG | 0.538705 | 1.2:-39854845 | None:intergenic |
| GCACCCAGGGTGGATTTAGG+TGG | 0.545220 | 1.2:-39854832 | None:intergenic |
| GCCCATGGTGAATGGGAACT+CGG | 0.546163 | 1.2:+39854466 | MS.gene37282:CDS |
| AACAAGTTTAATTCTGCTGA+AGG | 0.547801 | 1.2:+39854415 | MS.gene37282:CDS |
| TCCTATCTTTCGCAATTCAG+CGG | 0.550243 | 1.2:-39854968 | None:intergenic |
| GCAGAACCATTGTTAGAGAC+TGG | 0.559543 | 1.2:-39854373 | None:intergenic |
| CTAGTACCGCCTAGACCAGA+AGG | 0.560068 | 1.2:-39854571 | None:intergenic |
| TGGATGCCCGCAAACGAGGG+AGG | 0.563890 | 1.2:+39851369 | MS.gene37282:CDS |
| AAGATTCATCATCTGGGCAA+CGG | 0.568550 | 1.2:-39854311 | None:intergenic |
| GGACGGTGATCATCAACTGA+TGG | 0.568940 | 1.2:-39854502 | None:intergenic |
| CCAATGGCACCTACAAATGT+TGG | 0.569357 | 1.2:+39854523 | MS.gene37282:CDS |
| TTCTACACTGATCTTGGCAG+TGG | 0.569888 | 1.2:-39854608 | None:intergenic |
| CATTTGTAGGTGCCATTGGA+CGG | 0.575412 | 1.2:-39854519 | None:intergenic |
| CACCACCAGCAGGAGCACCC+AGG | 0.583302 | 1.2:-39854846 | None:intergenic |
| CAATGGATGCCCGCAAACGA+GGG | 0.583791 | 1.2:+39851366 | None:intergenic |
| GAAAGATGTCACTTTGCCCA+TGG | 0.584192 | 1.2:+39854943 | MS.gene37282:CDS |
| CTTGATGTTTCTTCCAGGTG+CGG | 0.585145 | 1.2:-39854875 | None:intergenic |
| ACAATGGATGCCCGCAAACG+AGG | 0.590226 | 1.2:+39851365 | None:intergenic |
| GAAATGGACTCAACTGGTGT+AGG | 0.590424 | 1.2:+39852432 | MS.gene37282:intron |
| AGGTTTAAGATTCATCATCT+GGG | 0.591191 | 1.2:-39854317 | None:intergenic |
| AATTAAACTTGTTACATATG+CGG | 0.591258 | 1.2:-39854405 | None:intergenic |
| CCACCACCAGTCTCTAACAA+TGG | 0.591961 | 1.2:+39854367 | MS.gene37282:CDS |
| TACCGAGTTCCCATTCACCA+TGG | 0.592664 | 1.2:-39854468 | None:intergenic |
| GGATGCCCGCAAACGAGGGA+GGG | 0.598945 | 1.2:+39851370 | MS.gene37282:CDS |
| AGTTGATGATCACCGTCCAA+TGG | 0.605823 | 1.2:+39854507 | MS.gene37282:CDS |
| ATTGTTAGAGACTGGTGGTG+GGG | 0.606388 | 1.2:-39854365 | None:intergenic |
| GAAGGAGCCTCAACTCGACC+AGG | 0.607588 | 1.2:-39854553 | None:intergenic |
| TCGTATGCCTGGTCGAGTTG+AGG | 0.614018 | 1.2:+39854546 | MS.gene37282:CDS |
| GGAGCTATCATTGGAAAGGG+TGG | 0.621933 | 1.2:+39854643 | MS.gene37282:CDS |
| GTTAGAGACTGGTGGTGGGG+CGG | 0.623695 | 1.2:-39854362 | None:intergenic |
| CATTGTTAGAGACTGGTGGT+GGG | 0.635968 | 1.2:-39854366 | None:intergenic |
| ACCCAGGGTGGATTTAGGTG+GGG | 0.640360 | 1.2:-39854830 | None:intergenic |
| AATTGCACAAGCAAGTAACA+TGG | 0.648235 | 1.2:+39854774 | MS.gene37282:CDS |
| TCCGTCAAGAAAACCAAACA+AGG | 0.648477 | 1.2:+39851413 | MS.gene37282:CDS |
| GCAACGGCATTATAACCACC+GGG | 0.654418 | 1.2:-39854295 | None:intergenic |
| TTCTCACATCATGTTCCCGG+TGG | 0.667160 | 1.2:+39854280 | MS.gene37282:CDS |
| GGGGCGGCAACATTTCTAGG+AGG | 0.676956 | 1.2:-39854346 | None:intergenic |
| ACCAGCAGGAGCACCCAGGG+TGG | 0.680551 | 1.2:-39854842 | None:intergenic |
| GAACCATTGTTAGAGACTGG+TGG | 0.695821 | 1.2:-39854370 | None:intergenic |
| GAGGCTCCTTCTGGTCTAGG+CGG | 0.707296 | 1.2:+39854565 | MS.gene37282:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAAATTTAGTTGT+TGG | + | chr1.2:39851589-39851608 | MS.gene37282:intron | 10.0% |
| !! | AATAAATAAAAAGTTTGAAG+AGG | - | chr1.2:39851450-39851469 | None:intergenic | 15.0% |
| !! | CTATTTACAAGATAATAAAA+TGG | + | chr1.2:39852847-39852866 | MS.gene37282:intron | 15.0% |
| !! | TACTACATTTAATAATTTAG+AGG | + | chr1.2:39852372-39852391 | MS.gene37282:intron | 15.0% |
| !! | TTCAAAATATTTGTTTAGAT+AGG | - | chr1.2:39852504-39852523 | None:intergenic | 15.0% |
| !!! | AGATTTTAAAAATTACAATC+TGG | - | chr1.2:39853054-39853073 | None:intergenic | 15.0% |
| !!! | TTTTCATAACAATAATACTT+TGG | + | chr1.2:39854173-39854192 | MS.gene37282:intron | 15.0% |
| !! | ACAGAATAATGGTTTATTAA+TGG | + | chr1.2:39852638-39852657 | MS.gene37282:intron | 20.0% |
| !! | ATATTATAGGCAATGATATA+TGG | + | chr1.2:39853732-39853751 | MS.gene37282:intron | 20.0% |
| !! | ATCAAATTGTAACAGAATAA+TGG | + | chr1.2:39852627-39852646 | MS.gene37282:intron | 20.0% |
| !! | GTTTAGTCAATTAAGAAATA+CGG | + | chr1.2:39853226-39853245 | MS.gene37282:intron | 20.0% |
| !! | TTACAAGATAATAAAATGGT+TGG | + | chr1.2:39852851-39852870 | MS.gene37282:intron | 20.0% |
| !! | TTTAATTGATGTAACATAAC+AGG | - | chr1.2:39853590-39853609 | None:intergenic | 20.0% |
| !!! | AATTAAACTTGTTACATATG+CGG | - | chr1.2:39854408-39854427 | None:intergenic | 20.0% |
| !!! | TTAAACAGTTTTTTAAGTTC+AGG | - | chr1.2:39851980-39851999 | None:intergenic | 20.0% |
| !!! | TTATTTTGATAGTAGTTAAC+AGG | + | chr1.2:39854124-39854143 | MS.gene37282:intron | 20.0% |
| !!! | TTCTTTTAGATAAAGGTAAT+TGG | - | chr1.2:39852152-39852171 | None:intergenic | 20.0% |
| !!! | TTTAGGTTTCTTTTAGATAA+AGG | - | chr1.2:39852159-39852178 | None:intergenic | 20.0% |
| ! | AACTACTTAGTTGAAGTAAT+AGG | - | chr1.2:39852959-39852978 | None:intergenic | 25.0% |
| ! | AATTAAGAAATACGGAATTC+CGG | + | chr1.2:39853234-39853253 | MS.gene37282:intron | 25.0% |
| ! | ACATTCCTATATTCTTCTTA+AGG | + | chr1.2:39854078-39854097 | MS.gene37282:intron | 25.0% |
| ! | ACTACTTAGTTGAAGTAATA+GGG | - | chr1.2:39852958-39852977 | None:intergenic | 25.0% |
| ! | AGCAAGATTTACAGTAATTA+AGG | - | chr1.2:39852757-39852776 | None:intergenic | 25.0% |
| ! | ATGTTAGTATTAAAGAGAGT+TGG | - | chr1.2:39853531-39853550 | None:intergenic | 25.0% |
| ! | CATATCAATGGCTATAAAAT+TGG | - | chr1.2:39853856-39853875 | None:intergenic | 25.0% |
| ! | GCTGATAAGTCATTATTAAA+TGG | - | chr1.2:39852782-39852801 | None:intergenic | 25.0% |
| ! | TAATGGTTTATTAATGGAGT+TGG | + | chr1.2:39852644-39852663 | MS.gene37282:intron | 25.0% |
| ! | TACAAAATTTACAGTCGTAA+AGG | - | chr1.2:39853151-39853170 | None:intergenic | 25.0% |
| ! | TAGTTAACAGGAAATGAAAA+GGG | + | chr1.2:39854136-39854155 | MS.gene37282:intron | 25.0% |
| ! | TTGTTGGATTTATGTTTGTT+TGG | + | chr1.2:39851605-39851624 | MS.gene37282:intron | 25.0% |
| ! | TTTAGTGTAATTACAAGTGT+CGG | + | chr1.2:39851854-39851873 | MS.gene37282:intron | 25.0% |
| ! | TTTATTAATGGAGTTGGAAA+AGG | + | chr1.2:39852650-39852669 | MS.gene37282:intron | 25.0% |
| !! | ATTTTATAGCCATTGATATG+TGG | + | chr1.2:39853856-39853875 | MS.gene37282:intron | 25.0% |
| !! | GAATGTTATTTGTTAGCTTA+TGG | - | chr1.2:39853882-39853901 | None:intergenic | 25.0% |
| !! | TTAATGTTTTGCAACAGAAA+TGG | + | chr1.2:39852416-39852435 | MS.gene37282:intron | 25.0% |
| !!! | AAAATTGGTTTTCTTTCAGA+GGG | - | chr1.2:39853841-39853860 | None:intergenic | 25.0% |
| !!! | AGTTCAATGTTTCTAAGATT+TGG | - | chr1.2:39854736-39854755 | None:intergenic | 25.0% |
| !!! | CAATTACGGTTTAGAATTTT+GGG | - | chr1.2:39852182-39852201 | None:intergenic | 25.0% |
| !!! | GTTCAATGTTTCTAAGATTT+GGG | - | chr1.2:39854735-39854754 | None:intergenic | 25.0% |
| !!! | TAAAATTGGTTTTCTTTCAG+AGG | - | chr1.2:39853842-39853861 | None:intergenic | 25.0% |
| !!! | TCAACCATCTTTTTTTCAAT+AGG | + | chr1.2:39853498-39853517 | MS.gene37282:intron | 25.0% |
| !!! | TTCTTTCCTTTAGTTTTTCT+TGG | + | chr1.2:39853405-39853424 | MS.gene37282:intron | 25.0% |
| AACAAGTTTAATTCTGCTGA+AGG | + | chr1.2:39854415-39854434 | MS.gene37282:CDS | 30.0% | |
| AGATTAGAACCTGAAAAACT+TGG | - | chr1.2:39852478-39852497 | None:intergenic | 30.0% | |
| AGCACCTATTGAAAAAAAGA+TGG | - | chr1.2:39853505-39853524 | None:intergenic | 30.0% | |
| AGTTAACAGGAAATGAAAAG+GGG | + | chr1.2:39854137-39854156 | MS.gene37282:intron | 30.0% | |
| ATCTAATTCTGCATCTTAAC+TGG | + | chr1.2:39852562-39852581 | MS.gene37282:intron | 30.0% | |
| CATCTCTTGTAGCATATTAT+AGG | + | chr1.2:39853719-39853738 | MS.gene37282:intron | 30.0% | |
| CTACTTAGTTGAAGTAATAG+GGG | - | chr1.2:39852957-39852976 | None:intergenic | 30.0% | |
| CTTAGAAACATTGAACTTGA+GGG | + | chr1.2:39854739-39854758 | MS.gene37282:CDS | 30.0% | |
| CTTGTAAATAGCTTACCAAT+TGG | - | chr1.2:39852838-39852857 | None:intergenic | 30.0% | |
| GAAAAACTAAAGGAAAGAAC+AGG | - | chr1.2:39853404-39853423 | None:intergenic | 30.0% | |
| GATAATAAAATGGTTGGATC+AGG | + | chr1.2:39852857-39852876 | MS.gene37282:intron | 30.0% | |
| GTAGTTAACAGGAAATGAAA+AGG | + | chr1.2:39854135-39854154 | MS.gene37282:intron | 30.0% | |
| TAAATAGCTTACCAATTGGA+AGG | - | chr1.2:39852834-39852853 | None:intergenic | 30.0% | |
| TACTTAGTTGAAGTAATAGG+GGG | - | chr1.2:39852956-39852975 | None:intergenic | 30.0% | |
| TCTAATTCTGCATCTTAACT+GGG | + | chr1.2:39852563-39852582 | MS.gene37282:intron | 30.0% | |
| TCTGTGTTCTTGAATTTGAA+AGG | + | chr1.2:39851487-39851506 | MS.gene37282:intron | 30.0% | |
| TCTTAGAAACATTGAACTTG+AGG | + | chr1.2:39854738-39854757 | MS.gene37282:CDS | 30.0% | |
| TGCAAAACAAGAAAACATCA+TGG | - | chr1.2:39854225-39854244 | None:intergenic | 30.0% | |
| TTATAAGCCAACATAGAGTT+GGG | + | chr1.2:39853938-39853957 | MS.gene37282:intron | 30.0% | |
| TTCATCAACTAAAATCCCAT+TGG | + | chr1.2:39853675-39853694 | MS.gene37282:intron | 30.0% | |
| TTCCACCTTAAGAAGAATAT+AGG | - | chr1.2:39854086-39854105 | None:intergenic | 30.0% | |
| TTCCTATATTCTTCTTAAGG+TGG | + | chr1.2:39854081-39854100 | MS.gene37282:intron | 30.0% | |
| TTGAAAATTTGACTCCTGTT+TGG | - | chr1.2:39854693-39854712 | None:intergenic | 30.0% | |
| ! | AGCTTTTGGTAAAACATTAG+AGG | + | chr1.2:39852985-39853004 | MS.gene37282:intron | 30.0% |
| ! | AGGTTTAAGATTCATCATCT+GGG | - | chr1.2:39854320-39854339 | None:intergenic | 30.0% |
| ! | AGTTCAACTAAAGAAGCATA+TGG | - | chr1.2:39851764-39851783 | None:intergenic | 30.0% |
| ! | GGAAAAGGATAATAATTTGC+AGG | + | chr1.2:39852665-39852684 | MS.gene37282:intron | 30.0% |
| ! | TGTATATGGTGTTTAAAACG+AGG | - | chr1.2:39852118-39852137 | None:intergenic | 30.0% |
| ! | TTTAGGATGATTGCTTCAAT+TGG | + | chr1.2:39852234-39852253 | MS.gene37282:intron | 30.0% |
| !! | AAGTAGTTCTATCAAGCTTT+TGG | + | chr1.2:39852971-39852990 | MS.gene37282:intron | 30.0% |
| !! | GCAATTACGGTTTAGAATTT+TGG | - | chr1.2:39852183-39852202 | None:intergenic | 30.0% |
| !! | GTGTTTTGTTCACATAAATC+TGG | + | chr1.2:39853295-39853314 | MS.gene37282:intron | 30.0% |
| !! | TGGCTTTGATTTGATGTATA+TGG | - | chr1.2:39852132-39852151 | None:intergenic | 30.0% |
| AACACAGAACAAGCAATCAA+AGG | - | chr1.2:39853174-39853193 | None:intergenic | 35.0% | |
| AACCATATCATATCCACCAA+AGG | - | chr1.2:39853803-39853822 | None:intergenic | 35.0% | |
| AACCTGAAAAACTTGGTACA+AGG | - | chr1.2:39852471-39852490 | None:intergenic | 35.0% | |
| AATTGCACAAGCAAGTAACA+TGG | + | chr1.2:39854774-39854793 | MS.gene37282:CDS | 35.0% | |
| ACACAACTCTGTTGCAATTA+CGG | - | chr1.2:39852196-39852215 | None:intergenic | 35.0% | |
| ACTATATCAACCTTCAACTC+AGG | - | chr1.2:39852288-39852307 | None:intergenic | 35.0% | |
| AGATGAGAAAAACCAATGGT+AGG | - | chr1.2:39853704-39853723 | None:intergenic | 35.0% | |
| AGTGTGTGTTATCTAACCTT+TGG | + | chr1.2:39853784-39853803 | MS.gene37282:intron | 35.0% | |
| ATAGGCAATGATATATGGTG+TGG | + | chr1.2:39853737-39853756 | MS.gene37282:intron | 35.0% | |
| ATTTAGTGTTCCCATTGTCA+TGG | - | chr1.2:39852696-39852715 | None:intergenic | 35.0% | |
| CAAGAGATGAGAAAAACCAA+TGG | - | chr1.2:39853708-39853727 | None:intergenic | 35.0% | |
| CCTAATATTGAACCTTCTAC+CGG | - | chr1.2:39853256-39853275 | None:intergenic | 35.0% | |
| CGAATCAGAACAATGACTAT+CGG | - | chr1.2:39853904-39853923 | None:intergenic | 35.0% | |
| CTATATCAACCTTCAACTCA+GGG | - | chr1.2:39852287-39852306 | None:intergenic | 35.0% | |
| GAACAACTAAAACACTGCAA+TGG | - | chr1.2:39853341-39853360 | None:intergenic | 35.0% | |
| GCATAAACAAAGTTCTCTCT+TGG | - | chr1.2:39852927-39852946 | None:intergenic | 35.0% | |
| GGAAGACCAAGAAAAACTAA+AGG | - | chr1.2:39853414-39853433 | None:intergenic | 35.0% | |
| GTTATAAGCCAACATAGAGT+TGG | + | chr1.2:39853937-39853956 | MS.gene37282:intron | 35.0% | |
| TAAGATTTGGGTCAGATTCA+TGG | - | chr1.2:39854723-39854742 | None:intergenic | 35.0% | |
| TGAACTATGAAGCACAGATA+CGG | + | chr1.2:39851778-39851797 | MS.gene37282:intron | 35.0% | |
| TTAGACACAGACGCATAATT+TGG | - | chr1.2:39852891-39852910 | None:intergenic | 35.0% | |
| TTATTGCTCTATGCTTGTCA+TGG | + | chr1.2:39851724-39851743 | MS.gene37282:intron | 35.0% | |
| TTTAGTGTTCCCATTGTCAT+GGG | - | chr1.2:39852695-39852714 | None:intergenic | 35.0% | |
| ! | AACCTTTGGTGGATATGATA+TGG | + | chr1.2:39853798-39853817 | MS.gene37282:intron | 35.0% |
| ! | AATCTAGACTTAGCTGGTTT+GGG | - | chr1.2:39853479-39853498 | None:intergenic | 35.0% |
| ! | CAGGTTTAAGATTCATCATC+TGG | - | chr1.2:39854321-39854340 | None:intergenic | 35.0% |
| ! | CTGTGTGAGAATTTTGCTAA+AGG | + | chr1.2:39854904-39854923 | MS.gene37282:CDS | 35.0% |
| ! | GGGTATTCTAAGCTTTATAC+AGG | + | chr1.2:39852583-39852602 | MS.gene37282:intron | 35.0% |
| !! | TCAGAGAGTGTTCAAAGTTT+AGG | + | chr1.2:39852217-39852236 | MS.gene37282:intron | 35.0% |
| !!! | ACCTTGTTTGGTTTTCTTGA+CGG | - | chr1.2:39851417-39851436 | None:intergenic | 35.0% |
| !!! | CGGTTTAGAATTTTGGGTTT+AGG | - | chr1.2:39852176-39852195 | None:intergenic | 35.0% |
| AAATACGGAATTCCGGTAGA+AGG | + | chr1.2:39853241-39853260 | MS.gene37282:intron | 40.0% | |
| AACCAATGGTAGGTTTCCAA+TGG | - | chr1.2:39853694-39853713 | None:intergenic | 40.0% | |
| AAGATTCATCATCTGGGCAA+CGG | - | chr1.2:39854314-39854333 | None:intergenic | 40.0% | |
| ACATCTTTCTCCAAATGTGC+AGG | - | chr1.2:39854932-39854951 | None:intergenic | 40.0% | |
| ACCAATGGTAGGTTTCCAAT+GGG | - | chr1.2:39853693-39853712 | None:intergenic | 40.0% | |
| AGAAGCTTCTACACTGATCT+TGG | - | chr1.2:39854617-39854636 | None:intergenic | 40.0% | |
| AGACTTCTGCATCATGTACA+AGG | + | chr1.2:39853609-39853628 | MS.gene37282:intron | 40.0% | |
| AGCAAAATTCTCACACAGCT+TGG | - | chr1.2:39854902-39854921 | None:intergenic | 40.0% | |
| AGCTTATGGCCACATATCAA+TGG | - | chr1.2:39853868-39853887 | None:intergenic | 40.0% | |
| ATAGCTTACCAATTGGAAGG+TGG | - | chr1.2:39852831-39852850 | None:intergenic | 40.0% | |
| CCGGTAGAAGGTTCAATATT+AGG | + | chr1.2:39853253-39853272 | MS.gene37282:intron | 40.0% | |
| GAATCTAGACTTAGCTGGTT+TGG | - | chr1.2:39853480-39853499 | None:intergenic | 40.0% | |
| GACTTCTGCATCATGTACAA+GGG | + | chr1.2:39853610-39853629 | MS.gene37282:intron | 40.0% | |
| GATCAGTGTAGAAGCTTCTT+TGG | + | chr1.2:39854618-39854637 | MS.gene37282:CDS | 40.0% | |
| GATGAAACCAGATCAACTCA+TGG | - | chr1.2:39853661-39853680 | None:intergenic | 40.0% | |
| GGCGAAAAAGAAACCTTGTT+TGG | - | chr1.2:39851429-39851448 | None:intergenic | 40.0% | |
| GTGTGTTATCTAACCTTTGG+TGG | + | chr1.2:39853787-39853806 | MS.gene37282:intron | 40.0% | |
| TAGCTTACCAATTGGAAGGT+GGG | - | chr1.2:39852830-39852849 | None:intergenic | 40.0% | |
| TCATCAACTGATGGAGCAAA+AGG | - | chr1.2:39854496-39854515 | None:intergenic | 40.0% | |
| TCCGTCAAGAAAACCAAACA+AGG | + | chr1.2:39851413-39851432 | MS.gene37282:CDS | 40.0% | |
| TCCTATCTTTCGCAATTCAG+CGG | - | chr1.2:39854971-39854990 | None:intergenic | 40.0% | |
| TGCTTGTTCTGTGTTTACGT+AGG | + | chr1.2:39853179-39853198 | MS.gene37282:intron | 40.0% | |
| TGGTTGAATCTAGACTTAGC+TGG | - | chr1.2:39853485-39853504 | None:intergenic | 40.0% | |
| TTCGACAACAGAGTTTCAGA+GGG | - | chr1.2:39852009-39852028 | None:intergenic | 40.0% | |
| TTGCTTCAACCTATGAAGCA+TGG | - | chr1.2:39851927-39851946 | None:intergenic | 40.0% | |
| ! | ATTGCTTCAATTGGAAGCAC+AGG | + | chr1.2:39852243-39852262 | MS.gene37282:intron | 40.0% |
| ! | TCTGATTCGCATTATCTGAC+TGG | + | chr1.2:39853915-39853934 | MS.gene37282:intron | 40.0% |
| !! | AGCCTTGTACCAAGTTTTTC+AGG | + | chr1.2:39852466-39852485 | MS.gene37282:CDS | 40.0% |
| !! | TCACTGGAATTTGCTATCGA+TGG | + | chr1.2:39852033-39852052 | MS.gene37282:intron | 40.0% |
| !! | TTGGTCTTGATGTTTCTTCC+AGG | - | chr1.2:39854883-39854902 | None:intergenic | 40.0% |
| !! | TTGGTTTTCTTTCAGAGGGA+GGG | - | chr1.2:39853837-39853856 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTCTTTCAGAGGG+AGG | - | chr1.2:39853838-39853857 | None:intergenic | 40.0% |
| !!! | TTCTTGTTTTGCAGCATTGC+TGG | + | chr1.2:39854232-39854251 | MS.gene37282:intron | 40.0% |
| AAGCAGATATGTCGCCAAAC+AGG | + | chr1.2:39854676-39854695 | MS.gene37282:CDS | 45.0% | |
| AAGTGACAACCCTCACCAAA+TGG | - | chr1.2:39854262-39854281 | None:intergenic | 45.0% | |
| ACAAATGTTGGTCGTATGCC+TGG | + | chr1.2:39854535-39854554 | MS.gene37282:CDS | 45.0% | |
| ACTGATCTTGGCAGTGGAAT+TGG | - | chr1.2:39854605-39854624 | None:intergenic | 45.0% | |
| AGTGTAGAAGCTTCTTTGGC+TGG | + | chr1.2:39854622-39854641 | MS.gene37282:CDS | 45.0% | |
| CAACATAGAGTTGGGCACTT+GGG | + | chr1.2:39853946-39853965 | MS.gene37282:intron | 45.0% | |
| CACTTCTCACATCATGTTCC+CGG | + | chr1.2:39854277-39854296 | MS.gene37282:CDS | 45.0% | |
| CAGGTGATTAGACTTGACTG+TGG | - | chr1.2:39853571-39853590 | None:intergenic | 45.0% | |
| CATTGTTAGAGACTGGTGGT+GGG | - | chr1.2:39854369-39854388 | None:intergenic | 45.0% | |
| CCAATGCTACAAAGCTGATC+AGG | - | chr1.2:39853110-39853129 | None:intergenic | 45.0% | |
| CCAATGGCACCTACAAATGT+TGG | + | chr1.2:39854523-39854542 | MS.gene37282:CDS | 45.0% | |
| CTTCGACAACAGAGTTTCAG+AGG | - | chr1.2:39852010-39852029 | None:intergenic | 45.0% | |
| CTTGATGTTTCTTCCAGGTG+CGG | - | chr1.2:39854878-39854897 | None:intergenic | 45.0% | |
| GAACCATTGTTAGAGACTGG+TGG | - | chr1.2:39854373-39854392 | None:intergenic | 45.0% | |
| GCAGAACCATTGTTAGAGAC+TGG | - | chr1.2:39854376-39854395 | None:intergenic | 45.0% | |
| GCTAAAGGATCCTGCACATT+TGG | + | chr1.2:39854919-39854938 | MS.gene37282:CDS | 45.0% | |
| GCTGGAGCTATCATTGGAAA+GGG | + | chr1.2:39854640-39854659 | MS.gene37282:CDS | 45.0% | |
| GGCATACGACCAACATTTGT+AGG | - | chr1.2:39854535-39854554 | None:intergenic | 45.0% | |
| TATGAAGCATGGACACTCCT+CGG | - | chr1.2:39851916-39851935 | None:intergenic | 45.0% | |
| TCCCATTGGAAACCTACCAT+TGG | + | chr1.2:39853689-39853708 | MS.gene37282:intron | 45.0% | |
| TCTGCTGAAGGCTGCAAATT+TGG | + | chr1.2:39854427-39854446 | MS.gene37282:CDS | 45.0% | |
| TCTGTTGTCGAAGTAGTCAC+TGG | + | chr1.2:39852017-39852036 | MS.gene37282:intron | 45.0% | |
| TCTTTGGCTGGAGCTATCAT+TGG | + | chr1.2:39854634-39854653 | MS.gene37282:CDS | 45.0% | |
| TGATGAACCCACCTTCCAAT+TGG | + | chr1.2:39852820-39852839 | MS.gene37282:intron | 45.0% | |
| TTCTACACTGATCTTGGCAG+TGG | - | chr1.2:39854611-39854630 | None:intergenic | 45.0% | |
| ! | AGGAGAGTACAACAGTTGGA+GGG | - | chr1.2:39853447-39853466 | None:intergenic | 45.0% |
| ! | AGTGAGGAGAGTACAACAGT+TGG | - | chr1.2:39853451-39853470 | None:intergenic | 45.0% |
| ! | ATTGTTAGAGACTGGTGGTG+GGG | - | chr1.2:39854368-39854387 | None:intergenic | 45.0% |
| ! | CCAACATTTGTAGGTGCCAT+TGG | - | chr1.2:39854526-39854545 | None:intergenic | 45.0% |
| ! | CCATTTTGCCCATGGTGAAT+GGG | + | chr1.2:39854459-39854478 | MS.gene37282:CDS | 45.0% |
| ! | CCTGATCAGCTTTGTAGCAT+TGG | + | chr1.2:39853107-39853126 | MS.gene37282:intron | 45.0% |
| ! | GAAATGGACTCAACTGGTGT+AGG | + | chr1.2:39852432-39852451 | MS.gene37282:intron | 45.0% |
| ! | GATGCAGTTGCGGATTAACT+TGG | + | chr1.2:39854009-39854028 | MS.gene37282:intron | 45.0% |
| ! | GCAACAGAAATGGACTCAAC+TGG | + | chr1.2:39852426-39852445 | MS.gene37282:intron | 45.0% |
| ! | TTCACATGACCCTGAGTTGA+AGG | + | chr1.2:39852275-39852294 | MS.gene37282:intron | 45.0% |
| !! | ACAGACACCATGAGTTGATC+TGG | + | chr1.2:39853651-39853670 | MS.gene37282:intron | 45.0% |
| !! | AGGGTTGATGCTGCTGTTAA+TGG | + | chr1.2:39851389-39851408 | MS.gene37282:CDS | 45.0% |
| !! | AGTTGATGATCACCGTCCAA+TGG | + | chr1.2:39854507-39854526 | MS.gene37282:CDS | 45.0% |
| !! | CATTTGTAGGTGCCATTGGA+CGG | - | chr1.2:39854522-39854541 | None:intergenic | 45.0% |
| !! | GAAAGATGTCACTTTGCCCA+TGG | + | chr1.2:39854943-39854962 | MS.gene37282:CDS | 45.0% |
| !!! | AAATTACAATTTTATTTATA+TGG | - | chr1.2:39851668-39851687 | None:intergenic | 5.0% |
| AAAGAACAGGACCAGAGCAG+TGG | - | chr1.2:39853391-39853410 | None:intergenic | 50.0% | |
| ACCGAGTTCCCATTCACCAT+GGG | - | chr1.2:39854470-39854489 | None:intergenic | 50.0% | |
| CCAACATAGAGTTGGGCACT+TGG | + | chr1.2:39853945-39853964 | MS.gene37282:intron | 50.0% | |
| CCAAGTGCCCAACTCTATGT+TGG | - | chr1.2:39853948-39853967 | None:intergenic | 50.0% | |
| CCACCACCAGTCTCTAACAA+TGG | + | chr1.2:39854367-39854386 | MS.gene37282:CDS | 50.0% | |
| CCATTGTTAGAGACTGGTGG+TGG | - | chr1.2:39854370-39854389 | None:intergenic | 50.0% | |
| CCCATTCACCATGGGCAAAA+TGG | - | chr1.2:39854462-39854481 | None:intergenic | 50.0% | |
| GCAACGGCATTATAACCACC+GGG | - | chr1.2:39854298-39854317 | None:intergenic | 50.0% | |
| GCAGGAAGACCCATGACAAT+GGG | + | chr1.2:39852683-39852702 | MS.gene37282:intron | 50.0% | |
| GCCGCTGAATTGCGAAAGAT+AGG | + | chr1.2:39854967-39854986 | MS.gene37282:CDS | 50.0% | |
| GCTTTGCTCTGATGCAGTTG+CGG | + | chr1.2:39853999-39854018 | MS.gene37282:intron | 50.0% | |
| GGACGGTGATCATCAACTGA+TGG | - | chr1.2:39854505-39854524 | None:intergenic | 50.0% | |
| GGAGCTATCATTGGAAAGGG+TGG | + | chr1.2:39854643-39854662 | MS.gene37282:CDS | 50.0% | |
| GGCAACGGCATTATAACCAC+CGG | - | chr1.2:39854299-39854318 | None:intergenic | 50.0% | |
| GGCTGGAGCTATCATTGGAA+AGG | + | chr1.2:39854639-39854658 | MS.gene37282:CDS | 50.0% | |
| GTACAACAGTTGGAGGGAAG+AGG | - | chr1.2:39853441-39853460 | None:intergenic | 50.0% | |
| TACCGAGTTCCCATTCACCA+TGG | - | chr1.2:39854471-39854490 | None:intergenic | 50.0% | |
| TGCAGGAAGACCCATGACAA+TGG | + | chr1.2:39852682-39852701 | MS.gene37282:intron | 50.0% | |
| TTCTCACATCATGTTCCCGG+TGG | + | chr1.2:39854280-39854299 | MS.gene37282:CDS | 50.0% | |
| ! | ACATTTCTAGGAGGTGCAGC+AGG | - | chr1.2:39854340-39854359 | None:intergenic | 50.0% |
| ! | AGCATTGCTGGCTGTCCATT+TGG | + | chr1.2:39854244-39854263 | MS.gene37282:intron | 50.0% |
| ! | GAGGAGAGTACAACAGTTGG+AGG | - | chr1.2:39853448-39853467 | None:intergenic | 50.0% |
| ! | GCTTCAATTGGAAGCACAGG+TGG | + | chr1.2:39852246-39852265 | MS.gene37282:intron | 50.0% |
| !! | AACCATCGCTCTGGAGCAAA+GGG | - | chr1.2:39853083-39853102 | None:intergenic | 50.0% |
| !! | ATCTGCTGTTTCCACTGCTC+TGG | + | chr1.2:39853377-39853396 | MS.gene37282:intron | 50.0% |
| !! | GAGGAGTGTCCATGCTTCAT+AGG | + | chr1.2:39851915-39851934 | MS.gene37282:intron | 50.0% |
| !! | GCCATTTTGCCCATGGTGAA+TGG | + | chr1.2:39854458-39854477 | MS.gene37282:CDS | 50.0% |
| !! | GCTGGTTTGGGCATATAGTG+AGG | - | chr1.2:39853467-39853486 | None:intergenic | 50.0% |
| !!! | GACAAGTGCCATTTTGCCCA+TGG | + | chr1.2:39854451-39854470 | MS.gene37282:CDS | 50.0% |
| ATCAACCCTCCCTCGTTTGC+GGG | - | chr1.2:39851378-39851397 | None:intergenic | 55.0% | |
| ATGTTTCTTCCAGGTGCGGC+TGG | - | chr1.2:39854874-39854893 | None:intergenic | 55.0% | |
| CATCAACCCTCCCTCGTTTG+CGG | - | chr1.2:39851379-39851398 | None:intergenic | 55.0% | |
| CTAGTACCGCCTAGACCAGA+AGG | - | chr1.2:39854574-39854593 | None:intergenic | 55.0% | |
| GCACAGATACGGACACGACA+CGG | + | chr1.2:39851789-39851808 | MS.gene37282:intron | 55.0% | |
| GCATGGACACTCCTCGGATT+AGG | - | chr1.2:39851910-39851929 | None:intergenic | 55.0% | |
| GCCCATGGTGAATGGGAACT+CGG | + | chr1.2:39854466-39854485 | MS.gene37282:CDS | 55.0% | |
| GTTGAGGCTCCTTCTGGTCT+AGG | + | chr1.2:39854562-39854581 | MS.gene37282:CDS | 55.0% | |
| TCAGGATGCAACCATCGCTC+TGG | - | chr1.2:39853092-39853111 | None:intergenic | 55.0% | |
| TCGCAATTCAGCGGCTCCAT+GGG | - | chr1.2:39854962-39854981 | None:intergenic | 55.0% | |
| TGTTTCTTCCAGGTGCGGCT+GGG | - | chr1.2:39854873-39854892 | None:intergenic | 55.0% | |
| TTCGCAATTCAGCGGCTCCA+TGG | - | chr1.2:39854963-39854982 | None:intergenic | 55.0% | |
| ! | ACCCAGGGTGGATTTAGGTG+GGG | - | chr1.2:39854833-39854852 | None:intergenic | 55.0% |
| ! | CACCCAGGGTGGATTTAGGT+GGG | - | chr1.2:39854834-39854853 | None:intergenic | 55.0% |
| ! | GCTGGCTGTCCATTTGGTGA+GGG | + | chr1.2:39854250-39854269 | MS.gene37282:CDS | 55.0% |
| ! | GGTCTAGGCGGTACTAGCTT+TGG | + | chr1.2:39854577-39854596 | MS.gene37282:CDS | 55.0% |
| ! | TCGTATGCCTGGTCGAGTTG+AGG | + | chr1.2:39854546-39854565 | MS.gene37282:CDS | 55.0% |
| ! | TGCTGGCTGTCCATTTGGTG+AGG | + | chr1.2:39854249-39854268 | MS.gene37282:CDS | 55.0% |
| !! | ACCATCGCTCTGGAGCAAAG+GGG | - | chr1.2:39853082-39853101 | None:intergenic | 55.0% |
| !! | CAACCATCGCTCTGGAGCAA+AGG | - | chr1.2:39853084-39853103 | None:intergenic | 55.0% |
| ACCTGGACACGCCTAATCCG+AGG | + | chr1.2:39851896-39851915 | MS.gene37282:intron | 60.0% | |
| CAGTTGGAGGGAAGAGGCAG+AGG | - | chr1.2:39853435-39853454 | None:intergenic | 60.0% | |
| GAAGGAGCCTCAACTCGACC+AGG | - | chr1.2:39854556-39854575 | None:intergenic | 60.0% | |
| GAGGCTCCTTCTGGTCTAGG+CGG | + | chr1.2:39854565-39854584 | MS.gene37282:CDS | 60.0% | |
| GCCCCACCTAAATCCACCCT+GGG | + | chr1.2:39854829-39854848 | MS.gene37282:CDS | 60.0% | |
| GGTGGGGCGGCAACATTTCT+AGG | - | chr1.2:39854352-39854371 | None:intergenic | 60.0% | |
| TCCCCTTTGCTCCAGAGCGA+TGG | + | chr1.2:39853078-39853097 | MS.gene37282:intron | 60.0% | |
| TGCCCCACCTAAATCCACCC+TGG | + | chr1.2:39854828-39854847 | MS.gene37282:CDS | 60.0% | |
| ! | GCACCCAGGGTGGATTTAGG+TGG | - | chr1.2:39854835-39854854 | None:intergenic | 60.0% |
| ! | GGAGCACCCAGGGTGGATTT+AGG | - | chr1.2:39854838-39854857 | None:intergenic | 60.0% |
| ! | GGGGCGGCAACATTTCTAGG+AGG | - | chr1.2:39854349-39854368 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+AGG | - | chr1.2:39851900-39851919 | None:intergenic | 60.0% |
| !! | GGTCGAGTTGAGGCTCCTTC+TGG | + | chr1.2:39854556-39854575 | MS.gene37282:CDS | 60.0% |
| !! | GTTAGAGACTGGTGGTGGGG+CGG | - | chr1.2:39854365-39854384 | None:intergenic | 60.0% |
| !! | TGTCGGTGTCGCGTCAGTGT+CGG | + | chr1.2:39851871-39851890 | MS.gene37282:intron | 60.0% |
| GGATGCCCGCAAACGAGGGA+GGG | + | chr1.2:39851370-39851389 | MS.gene37282:CDS | 65.0% | |
| TGGATGCCCGCAAACGAGGG+AGG | + | chr1.2:39851369-39851388 | MS.gene37282:CDS | 65.0% | |
| ! | TCGCGTCAGTGTCGGACACC+TGG | + | chr1.2:39851879-39851898 | MS.gene37282:intron | 65.0% |
| !! | ACCACCAGCAGGAGCACCCA+GGG | - | chr1.2:39854848-39854867 | None:intergenic | 65.0% |
| ACCCTGGGTGCTCCTGCTGG+TGG | + | chr1.2:39854844-39854863 | MS.gene37282:CDS | 70.0% | |
| CTGGGTGCTCCTGCTGGTGG+TGG | + | chr1.2:39854847-39854866 | MS.gene37282:CDS | 70.0% | |
| TCCACCCTGGGTGCTCCTGC+TGG | + | chr1.2:39854841-39854860 | MS.gene37282:CDS | 70.0% | |
| !! | ACCAGCAGGAGCACCCAGGG+TGG | - | chr1.2:39854845-39854864 | None:intergenic | 70.0% |
| !! | CACCACCAGCAGGAGCACCC+AGG | - | chr1.2:39854849-39854868 | None:intergenic | 70.0% |
| ! | GCGGCTGGGCCACCACCAGC+AGG | - | chr1.2:39854859-39854878 | None:intergenic | 80.0% |
| !! | GGTGGTGGCCCAGCCGCACC+TGG | + | chr1.2:39854862-39854881 | MS.gene37282:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 39851368 | 39854996 | 39851368 | ID=MS.gene37282 |
| chr1.2 | mRNA | 39851368 | 39854996 | 39851368 | ID=MS.gene37282.t1;Parent=MS.gene37282 |
| chr1.2 | exon | 39851368 | 39851434 | 39851368 | ID=MS.gene37282.t1.exon1;Parent=MS.gene37282.t1 |
| chr1.2 | CDS | 39851368 | 39851434 | 39851368 | ID=cds.MS.gene37282.t1;Parent=MS.gene37282.t1 |
| chr1.2 | exon | 39852433 | 39852487 | 39852433 | ID=MS.gene37282.t1.exon2;Parent=MS.gene37282.t1 |
| chr1.2 | CDS | 39852433 | 39852487 | 39852433 | ID=cds.MS.gene37282.t1;Parent=MS.gene37282.t1 |
| chr1.2 | exon | 39854246 | 39854996 | 39854246 | ID=MS.gene37282.t1.exon3;Parent=MS.gene37282.t1 |
| chr1.2 | CDS | 39854246 | 39854996 | 39854246 | ID=cds.MS.gene37282.t1;Parent=MS.gene37282.t1 |
| Gene Sequence |
| Protein sequence |
