Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37483.t1 | XP_003625981.1 | 75 | 517 | 106 | 2 | 142 | 658 | 303 | 796 | 4.70E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37483.t1 | F4IXE7 | 30.0 | 434 | 268 | 7 | 222 | 649 | 620 | 1023 | 1.2e-54 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37483.t1 | G7KTL9 | 75.0 | 517 | 106 | 2 | 142 | 658 | 303 | 796 | 3.4e-204 | 721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37483.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene37483 | 0.806912 | 6.53E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene37483 | 0.841061 | 5.97E-58 | -1.69E-46 |
| MS.gene049435 | MS.gene37483 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene37483 | 0.841504 | 4.57E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene37483 | 0.840914 | 6.53E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene37483 | 0.84676 | 1.77E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene37483 | 0.85634 | 3.44E-62 | -1.69E-46 |
| MS.gene050623 | MS.gene37483 | -0.837638 | 4.62E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene37483 | 0.832877 | 7.35E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene37483 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene37483 | 0.831349 | 1.76E-55 | -1.69E-46 |
| MS.gene050780 | MS.gene37483 | 0.818478 | 1.92E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene37483 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene37483 | 0.81657 | 5.17E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene37483 | 0.807334 | 5.32E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene37483 | 0.816439 | 5.53E-52 | -1.69E-46 |
| MS.gene05215 | MS.gene37483 | 0.811502 | 6.78E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene37483 | 0.803961 | 2.72E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene37483 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene37483 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene37483 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene37483 | 0.809883 | 1.52E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene37483 | -0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene37483 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene37483 | 0.81148 | 6.85E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene37483 | 0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene37483 | 0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene055701 | MS.gene37483 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene37483 | 0.824504 | 7.79E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene37483 | 0.808235 | 3.42E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene37483 | 0.826315 | 2.90E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene37483 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene37483 | 0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene37483 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene37483 | 0.814668 | 1.37E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene37483 | 0.815058 | 1.12E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene37483 | 0.811016 | 8.64E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene37483 | 0.807078 | 6.03E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene37483 | 0.807149 | 5.82E-50 | -1.69E-46 |
| MS.gene05973 | MS.gene37483 | 0.805008 | 1.64E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene37483 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene37483 | 0.805559 | 1.26E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene37483 | 0.843407 | 1.43E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene37483 | 0.844912 | 5.63E-59 | -1.69E-46 |
| MS.gene060802 | MS.gene37483 | 0.815922 | 7.21E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene37483 | 0.82886 | 7.11E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene37483 | 0.839786 | 1.29E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37483.t1 | MTR_3g103110 | 63.041 | 809 | 139 | 8 | 1 | 658 | 1 | 800 | 0.0 | 946 |
| MS.gene37483.t1 | MTR_7g109640 | 71.003 | 638 | 139 | 3 | 44 | 658 | 182 | 796 | 0.0 | 871 |
| MS.gene37483.t1 | MTR_7g109640 | 66.250 | 80 | 24 | 1 | 22 | 101 | 74 | 150 | 7.52e-19 | 91.7 |
| MS.gene37483.t1 | MTR_3g103120 | 65.789 | 608 | 135 | 3 | 51 | 658 | 307 | 841 | 0.0 | 759 |
| MS.gene37483.t1 | MTR_3g103120 | 34.783 | 253 | 94 | 7 | 1 | 190 | 1 | 245 | 7.24e-21 | 98.2 |
| MS.gene37483.t1 | MTR_5g024390 | 72.727 | 440 | 102 | 5 | 223 | 658 | 3 | 428 | 0.0 | 662 |
| MS.gene37483.t1 | MTR_5g024500 | 72.273 | 440 | 104 | 5 | 223 | 658 | 3 | 428 | 0.0 | 657 |
| MS.gene37483.t1 | MTR_5g071340 | 40.826 | 436 | 225 | 8 | 222 | 651 | 678 | 1086 | 1.97e-105 | 345 |
| MS.gene37483.t1 | MTR_3g464550 | 40.920 | 435 | 222 | 9 | 222 | 649 | 602 | 1008 | 1.31e-103 | 340 |
| MS.gene37483.t1 | MTR_3g103160 | 40.100 | 601 | 189 | 16 | 57 | 651 | 3 | 438 | 4.42e-92 | 292 |
| MS.gene37483.t1 | MTR_2g078040 | 35.412 | 449 | 257 | 9 | 206 | 649 | 746 | 1166 | 3.50e-79 | 275 |
| MS.gene37483.t1 | MTR_1g103830 | 32.483 | 431 | 269 | 4 | 220 | 649 | 603 | 1012 | 1.04e-66 | 238 |
| MS.gene37483.t1 | MTR_1g072130 | 32.045 | 440 | 265 | 8 | 220 | 651 | 809 | 1222 | 3.65e-65 | 234 |
| MS.gene37483.t1 | MTR_7g095140 | 31.579 | 323 | 193 | 5 | 338 | 655 | 8 | 307 | 4.00e-49 | 176 |
| MS.gene37483.t1 | MTR_1g068930 | 26.013 | 469 | 250 | 15 | 224 | 649 | 441 | 855 | 5.67e-43 | 166 |
| MS.gene37483.t1 | MTR_1g068930 | 26.013 | 469 | 250 | 15 | 224 | 649 | 478 | 892 | 7.43e-43 | 166 |
| MS.gene37483.t1 | MTR_7g102610 | 25.263 | 475 | 237 | 14 | 249 | 656 | 527 | 950 | 1.08e-37 | 150 |
| MS.gene37483.t1 | MTR_4g099530 | 25.339 | 442 | 263 | 14 | 222 | 649 | 110 | 498 | 8.86e-34 | 136 |
| MS.gene37483.t1 | MTR_4g057290 | 26.744 | 430 | 206 | 12 | 257 | 621 | 126 | 511 | 8.90e-32 | 130 |
| MS.gene37483.t1 | MTR_4g056990 | 24.506 | 506 | 267 | 15 | 212 | 658 | 179 | 628 | 1.30e-30 | 127 |
| MS.gene37483.t1 | MTR_1g062330 | 24.837 | 459 | 241 | 12 | 257 | 651 | 386 | 804 | 1.69e-30 | 128 |
| MS.gene37483.t1 | MTR_4g050090 | 24.031 | 516 | 267 | 15 | 212 | 652 | 179 | 644 | 5.62e-28 | 120 |
| MS.gene37483.t1 | MTR_6g061000 | 58.140 | 86 | 27 | 2 | 310 | 395 | 25 | 101 | 3.20e-23 | 95.1 |
| MS.gene37483.t1 | MTR_2g084425 | 29.630 | 189 | 112 | 6 | 469 | 653 | 847 | 1018 | 3.15e-18 | 89.7 |
| MS.gene37483.t1 | MTR_3g109988 | 32.086 | 187 | 98 | 7 | 441 | 620 | 191 | 355 | 1.23e-14 | 76.3 |
| MS.gene37483.t1 | MTR_3g110005 | 32.086 | 187 | 98 | 7 | 441 | 620 | 191 | 355 | 1.23e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 359 | 777 | 7.33e-101 | 327 |
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 590 | 1008 | 5.99e-99 | 326 |
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 590 | 1008 | 5.99e-99 | 326 |
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 590 | 1008 | 8.69e-99 | 327 |
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 581 | 999 | 1.66e-98 | 326 |
| MS.gene37483.t1 | AT5G58610 | 39.955 | 443 | 238 | 7 | 211 | 649 | 581 | 999 | 2.30e-98 | 325 |
| MS.gene37483.t1 | AT5G58610 | 37.868 | 441 | 224 | 7 | 211 | 649 | 581 | 973 | 5.08e-87 | 294 |
| MS.gene37483.t1 | AT5G58610 | 37.868 | 441 | 224 | 7 | 211 | 649 | 581 | 973 | 5.08e-87 | 294 |
| MS.gene37483.t1 | AT5G58610 | 39.386 | 391 | 209 | 7 | 211 | 597 | 590 | 956 | 1.27e-83 | 283 |
| MS.gene37483.t1 | AT5G58610 | 39.386 | 391 | 209 | 7 | 211 | 597 | 581 | 947 | 2.11e-83 | 282 |
| MS.gene37483.t1 | AT5G36740 | 32.054 | 443 | 260 | 8 | 215 | 649 | 540 | 949 | 8.32e-70 | 247 |
| MS.gene37483.t1 | AT5G36740 | 32.054 | 443 | 260 | 8 | 215 | 649 | 540 | 949 | 8.32e-70 | 247 |
| MS.gene37483.t1 | AT5G58610 | 37.960 | 353 | 191 | 7 | 211 | 559 | 581 | 909 | 4.64e-68 | 239 |
| MS.gene37483.t1 | AT1G05380 | 32.265 | 437 | 261 | 5 | 220 | 649 | 517 | 925 | 1.26e-67 | 240 |
| MS.gene37483.t1 | AT1G05380 | 32.265 | 437 | 261 | 5 | 220 | 649 | 517 | 925 | 1.26e-67 | 240 |
| MS.gene37483.t1 | AT1G05380 | 32.265 | 437 | 261 | 5 | 220 | 649 | 517 | 925 | 1.26e-67 | 240 |
| MS.gene37483.t1 | AT5G36740 | 31.473 | 448 | 266 | 8 | 215 | 649 | 387 | 806 | 1.60e-67 | 239 |
| MS.gene37483.t1 | AT3G14980 | 31.136 | 440 | 267 | 8 | 222 | 655 | 620 | 1029 | 7.60e-64 | 229 |
| MS.gene37483.t1 | AT3G14980 | 31.136 | 440 | 267 | 8 | 222 | 655 | 620 | 1029 | 7.60e-64 | 229 |
| MS.gene37483.t1 | AT3G14980 | 31.136 | 440 | 267 | 8 | 222 | 655 | 620 | 1029 | 7.60e-64 | 229 |
| MS.gene37483.t1 | AT3G14980 | 31.136 | 440 | 267 | 8 | 222 | 655 | 575 | 984 | 8.08e-64 | 229 |
| MS.gene37483.t1 | AT3G14980 | 31.136 | 440 | 267 | 8 | 222 | 655 | 620 | 1029 | 1.17e-63 | 228 |
| MS.gene37483.t1 | AT5G36670 | 29.847 | 459 | 263 | 10 | 215 | 649 | 540 | 963 | 5.58e-61 | 221 |
| MS.gene37483.t1 | AT5G36670 | 29.847 | 459 | 263 | 10 | 215 | 649 | 540 | 963 | 5.58e-61 | 221 |
| MS.gene37483.t1 | AT4G14920 | 29.933 | 451 | 284 | 6 | 208 | 652 | 562 | 986 | 5.44e-60 | 218 |
| MS.gene37483.t1 | AT4G14920 | 29.933 | 451 | 284 | 6 | 208 | 652 | 562 | 986 | 6.14e-60 | 218 |
| MS.gene37483.t1 | AT4G14920 | 29.933 | 451 | 284 | 6 | 208 | 652 | 562 | 986 | 6.14e-60 | 218 |
| MS.gene37483.t1 | AT5G36670 | 29.310 | 464 | 269 | 10 | 215 | 649 | 387 | 820 | 1.39e-58 | 213 |
| MS.gene37483.t1 | AT5G36740 | 31.429 | 385 | 223 | 8 | 215 | 591 | 540 | 891 | 1.97e-58 | 212 |
| MS.gene37483.t1 | AT5G36740 | 31.429 | 385 | 223 | 8 | 215 | 591 | 540 | 891 | 1.97e-58 | 212 |
| MS.gene37483.t1 | AT5G36670 | 31.429 | 385 | 223 | 8 | 215 | 591 | 540 | 891 | 1.97e-58 | 212 |
| MS.gene37483.t1 | AT5G36670 | 29.310 | 464 | 269 | 10 | 215 | 649 | 540 | 973 | 3.56e-58 | 213 |
| MS.gene37483.t1 | AT5G63900 | 36.570 | 309 | 169 | 8 | 346 | 651 | 258 | 542 | 5.09e-58 | 205 |
| MS.gene37483.t1 | AT3G53680 | 28.859 | 447 | 222 | 14 | 224 | 624 | 411 | 807 | 7.48e-44 | 169 |
| MS.gene37483.t1 | AT3G53680 | 28.859 | 447 | 222 | 14 | 224 | 624 | 409 | 805 | 8.21e-44 | 169 |
| MS.gene37483.t1 | AT2G37520 | 26.025 | 488 | 239 | 15 | 224 | 651 | 392 | 817 | 5.35e-42 | 163 |
| MS.gene37483.t1 | AT3G14980 | 29.855 | 345 | 206 | 8 | 222 | 560 | 620 | 934 | 1.95e-41 | 162 |
| MS.gene37483.t1 | AT2G27980 | 26.389 | 504 | 263 | 14 | 217 | 652 | 597 | 1060 | 2.78e-38 | 152 |
| MS.gene37483.t1 | AT2G36720 | 25.435 | 460 | 237 | 14 | 257 | 653 | 557 | 973 | 7.15e-38 | 151 |
| MS.gene37483.t1 | AT2G36720 | 25.435 | 460 | 237 | 14 | 257 | 653 | 557 | 973 | 7.15e-38 | 151 |
Find 118 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACATTGTTGTTTGCATTT+TGG | 0.154123 | 3.4:-90739418 | None:intergenic |
| GTTGCAACTATAAGAATTTA+TGG | 0.208645 | 3.4:+90739901 | MS.gene37483:CDS |
| AAGGCCATATAGGTCTATTT+AGG | 0.215735 | 3.4:-90740182 | None:intergenic |
| CCAACTATTGATGCTTTATC+TGG | 0.251503 | 3.4:+90739769 | MS.gene37483:CDS |
| AACACCATCATTATTTGCTT+TGG | 0.281757 | 3.4:-90739254 | None:intergenic |
| TTCTGTCTGAAGAAGCTATT+AGG | 0.283860 | 3.4:+90739595 | MS.gene37483:CDS |
| AGGTTGCAAATAAAATAAAT+TGG | 0.285418 | 3.4:+90739629 | MS.gene37483:CDS |
| TAGGTCTATTTAGGGATTTA+AGG | 0.304954 | 3.4:-90740173 | None:intergenic |
| GTTTGTTCTATTTGTGGTTT+GGG | 0.311387 | 3.4:+90739274 | MS.gene37483:CDS |
| GCTATTAGGGAAACCAATTA+AGG | 0.314529 | 3.4:+90739609 | MS.gene37483:CDS |
| AAAGGTATTCACTTGTTTCT+TGG | 0.322354 | 3.4:+90738894 | MS.gene37483:CDS |
| TGTGTAAAGGCTACAAGATT+TGG | 0.323605 | 3.4:+90739502 | MS.gene37483:CDS |
| GTTGATAAAGAATCAAGTTT+TGG | 0.324712 | 3.4:+90738916 | MS.gene37483:CDS |
| AGGCCATATAGGTCTATTTA+GGG | 0.326281 | 3.4:-90740181 | None:intergenic |
| AATCCCTAAATAGACCTATA+TGG | 0.346948 | 3.4:+90740178 | MS.gene37483:CDS |
| TGTTTGTTCTATTTGTGGTT+TGG | 0.372212 | 3.4:+90739273 | MS.gene37483:CDS |
| GAAAATGGGTAAAGTCATTT+CGG | 0.376245 | 3.4:+90739879 | MS.gene37483:CDS |
| TATGGCCTTGTATTGCTTGA+TGG | 0.376913 | 3.4:+90740196 | MS.gene37483:CDS |
| CTTAGGTCTCGATCAAGTTC+CGG | 0.377173 | 3.4:+90739348 | MS.gene37483:CDS |
| TTAGGTTCTGGGCAGTTCTC+AGG | 0.378707 | 3.4:-90738278 | None:intergenic |
| GGTCATTGTTGGAATGTCAT+AGG | 0.382443 | 3.4:+90739116 | MS.gene37483:CDS |
| CGTGTTAATTTCACTATCAC+TGG | 0.385095 | 3.4:+90739028 | MS.gene37483:CDS |
| CCCTACTTCAGAACTTGCTT+CGG | 0.386240 | 3.4:-90739218 | None:intergenic |
| CCAGATAAAGCATCAATAGT+TGG | 0.388520 | 3.4:-90739769 | None:intergenic |
| AGTAACAATGTTGTCAAAAG+AGG | 0.388998 | 3.4:+90738968 | MS.gene37483:CDS |
| TCAGGTTCTATGTTGAAATC+AGG | 0.401611 | 3.4:-90738260 | None:intergenic |
| AGTATTAAAGATGAGTATAA+TGG | 0.402129 | 3.4:+90738811 | MS.gene37483:CDS |
| GATGGTGTTTGTTCTATTTG+TGG | 0.402818 | 3.4:+90739268 | MS.gene37483:CDS |
| CAAATTGACACTTGTCTTCA+CGG | 0.405716 | 3.4:-90740110 | None:intergenic |
| TTCTTCAATGCAACTCTCGC+AGG | 0.405765 | 3.4:-90738333 | None:intergenic |
| CAATTTCTTCGTCTCTGTTA+CGG | 0.406401 | 3.4:+90738402 | MS.gene37483:CDS |
| ACCATCCACTACTATCTTGT+TGG | 0.407099 | 3.4:+90739084 | MS.gene37483:CDS |
| TGCTATTGCTGCTGCTTCCT+CGG | 0.411590 | 3.4:-90738513 | None:intergenic |
| GCATTCCACCTCGTTTGCTT+AGG | 0.414402 | 3.4:+90739331 | MS.gene37483:CDS |
| GAGAAGAATTCAGAGGTTTA+CGG | 0.421103 | 3.4:+90738833 | MS.gene37483:CDS |
| GCTGCTTCCTCGGATTCTCT+TGG | 0.429778 | 3.4:-90738503 | None:intergenic |
| CCCACCGAATTAGTAACTTC+TGG | 0.432390 | 3.4:-90738713 | None:intergenic |
| TCTGTCTGAAGAAGCTATTA+GGG | 0.432712 | 3.4:+90739596 | MS.gene37483:CDS |
| TTTCACTATCACTGGATTTG+AGG | 0.433458 | 3.4:+90739036 | MS.gene37483:CDS |
| ATCAAGTTCCGGATGGTGAT+TGG | 0.433575 | 3.4:+90739359 | MS.gene37483:CDS |
| CATAAACGCTTGAATTTCCA+TGG | 0.434704 | 3.4:+90739835 | MS.gene37483:CDS |
| TATAAGAATTTATGGTCAAA+AGG | 0.441015 | 3.4:+90739909 | MS.gene37483:CDS |
| TCAGAGTTCGCATGATGAAA+AGG | 0.443317 | 3.4:+90739144 | MS.gene37483:CDS |
| CAGATAAAGCATCAATAGTT+GGG | 0.446006 | 3.4:-90739768 | None:intergenic |
| TGTTGCTTCTGCTGTTTCCT+CGG | 0.450642 | 3.4:-90738447 | None:intergenic |
| CAGAGTTCGCATGATGAAAA+GGG | 0.457917 | 3.4:+90739145 | MS.gene37483:CDS |
| GCTACTGGTGCTGCAGTCGA+AGG | 0.458616 | 3.4:-90738377 | None:intergenic |
| TGAACCAGAAGTTACTAATT+CGG | 0.467506 | 3.4:+90738709 | MS.gene37483:CDS |
| CAAGCAATACAAGGCCATAT+AGG | 0.468400 | 3.4:-90740192 | None:intergenic |
| CTGCAGTCGAAGGGTGTTTG+AGG | 0.471352 | 3.4:-90738367 | None:intergenic |
| GACGAAGAAATTGCTGCTAC+TGG | 0.475004 | 3.4:-90738392 | None:intergenic |
| GACACGTGGACAAAAGCGTT+TGG | 0.477202 | 3.4:+90740072 | MS.gene37483:CDS |
| GAGAAACAGTTGACACGCTT+AGG | 0.478300 | 3.4:+90740009 | MS.gene37483:CDS |
| AGGCTCATGCTGGTTGTACA+AGG | 0.491245 | 3.4:+90739056 | MS.gene37483:CDS |
| AAATTGACACTTGTCTTCAC+GGG | 0.497364 | 3.4:-90740109 | None:intergenic |
| GAGAGGGAAGGTATCAAAGA+GGG | 0.502506 | 3.4:+90738859 | MS.gene37483:CDS |
| TACTACGGTGTCAACATCAA+TGG | 0.502626 | 3.4:+90738661 | MS.gene37483:CDS |
| TTGTCTTCGATATTGTTCCT+TGG | 0.503462 | 3.4:-90739956 | None:intergenic |
| ATCATCAGAAGTTGATTCAT+CGG | 0.513368 | 3.4:-90738549 | None:intergenic |
| GGAAGACGGAAGGTCATTGT+TGG | 0.514903 | 3.4:+90739105 | MS.gene37483:CDS |
| ACTGGATTTGAGGCTCATGC+TGG | 0.514944 | 3.4:+90739046 | MS.gene37483:CDS |
| TATCAAAGAGGGAAGGTACA+AGG | 0.524975 | 3.4:+90738870 | MS.gene37483:CDS |
| CCACGTGTCTATAGCATCCT+CGG | 0.528623 | 3.4:-90740058 | None:intergenic |
| CCGAAGCAAGTTCTGAAGTA+GGG | 0.528703 | 3.4:+90739218 | MS.gene37483:CDS |
| TCTTCAATGCAACTCTCGCA+GGG | 0.531694 | 3.4:-90738332 | None:intergenic |
| GTTACTAATTCGGTGGGTAG+TGG | 0.540215 | 3.4:+90738719 | MS.gene37483:CDS |
| TGCAGTCGAAGGGTGTTTGA+GGG | 0.545311 | 3.4:-90738366 | None:intergenic |
| TCCGAAGCAAGTTCTGAAGT+AGG | 0.548155 | 3.4:+90739217 | MS.gene37483:CDS |
| ACGCTTAGGAGTTGAAAGCT+TGG | 0.553379 | 3.4:+90740023 | MS.gene37483:CDS |
| GTCATTGTTGGAATGTCATA+GGG | 0.554868 | 3.4:+90739117 | MS.gene37483:CDS |
| CAGACGATTGTGGTAGAAGA+GGG | 0.555231 | 3.4:+90738786 | MS.gene37483:CDS |
| CTACTGGTGCTGCAGTCGAA+GGG | 0.556866 | 3.4:-90738376 | None:intergenic |
| TGCGAGAGTTGCATTGAAGA+AGG | 0.557070 | 3.4:+90738335 | MS.gene37483:CDS |
| AACTACCATCAAGCAATACA+AGG | 0.564139 | 3.4:-90740201 | None:intergenic |
| GGACAAAACCAATCACCATC+CGG | 0.566171 | 3.4:-90739367 | None:intergenic |
| CAGAGGTTTACGGTAAGAGA+GGG | 0.567218 | 3.4:+90738843 | MS.gene37483:CDS |
| TCGGTGGGTAGTGGTAAAAG+AGG | 0.571961 | 3.4:+90738728 | MS.gene37483:CDS |
| AAATCACATTATAGAAACCA+TGG | 0.572412 | 3.4:-90739852 | None:intergenic |
| GGTAGCCACGAAAACTATCT+CGG | 0.575564 | 3.4:-90739935 | None:intergenic |
| TATAATGGAGAAGAATTCAG+AGG | 0.575599 | 3.4:+90738826 | MS.gene37483:CDS |
| TCAGACGATTGTGGTAGAAG+AGG | 0.577488 | 3.4:+90738785 | MS.gene37483:CDS |
| TCAGAGGTTTACGGTAAGAG+AGG | 0.577597 | 3.4:+90738842 | MS.gene37483:CDS |
| GTAACAATGTTGTCAAAAGA+GGG | 0.581494 | 3.4:+90738969 | MS.gene37483:CDS |
| TGTTCTATTTGTGGTTTGGG+AGG | 0.585455 | 3.4:+90739277 | MS.gene37483:CDS |
| ACTACTATCTTGTTGGAAGA+CGG | 0.590421 | 3.4:+90739091 | MS.gene37483:CDS |
| AAAGCGACCAAGAGAATCCG+AGG | 0.592053 | 3.4:+90738496 | MS.gene37483:CDS |
| AGAGAGGGAAGGTATCAAAG+AGG | 0.595325 | 3.4:+90738858 | MS.gene37483:CDS |
| GTTTCCAAAGCAAATAATGA+TGG | 0.599744 | 3.4:+90739250 | MS.gene37483:CDS |
| ACCAGAAGTTACTAATTCGG+TGG | 0.600989 | 3.4:+90738712 | MS.gene37483:CDS |
| AAAGAGATTGAGAGAATCCG+AGG | 0.612293 | 3.4:+90738430 | MS.gene37483:CDS |
| GAGAAGAATTCAGACGATTG+TGG | 0.613172 | 3.4:+90738776 | MS.gene37483:CDS |
| AGAGGGAAGGTACAAGGGAA+AGG | 0.618121 | 3.4:+90738876 | MS.gene37483:CDS |
| GTCTTCCAACAAGATAGTAG+TGG | 0.619064 | 3.4:-90739089 | None:intergenic |
| AAAGAAGAGAAAGTTGAATG+TGG | 0.626130 | 3.4:+90739717 | MS.gene37483:CDS |
| CCAGAAGTTACTAATTCGGT+GGG | 0.626761 | 3.4:+90738713 | MS.gene37483:CDS |
| TTCTGAATCAACTTCTGACG+AGG | 0.630454 | 3.4:+90738595 | MS.gene37483:CDS |
| TCCAACAAGATAGTAGTGGA+TGG | 0.630549 | 3.4:-90739085 | None:intergenic |
| CAAACGAGGTGGAATGCAGA+AGG | 0.631169 | 3.4:-90739325 | None:intergenic |
| GAGAGTTGCATTGAAGAAGG+AGG | 0.635933 | 3.4:+90738338 | MS.gene37483:CDS |
| GGGTAGTGGTAAAAGAGGAA+AGG | 0.636646 | 3.4:+90738733 | MS.gene37483:CDS |
| AGAGTTGCATTGAAGAAGGA+GGG | 0.637310 | 3.4:+90738339 | MS.gene37483:CDS |
| ATCAAAGAGGGAAGGTACAA+GGG | 0.637578 | 3.4:+90738871 | MS.gene37483:CDS |
| CTATCTTGTTGGAAGACGGA+AGG | 0.639850 | 3.4:+90739095 | MS.gene37483:CDS |
| GGGAAGGTATCAAAGAGGGA+AGG | 0.651040 | 3.4:+90738863 | MS.gene37483:CDS |
| AGAGTTCGCATGATGAAAAG+GGG | 0.652963 | 3.4:+90739146 | MS.gene37483:CDS |
| TCTATGTTGAAATCAGGAGG+TGG | 0.653673 | 3.4:-90738254 | None:intergenic |
| GGTTCTATGTTGAAATCAGG+AGG | 0.654128 | 3.4:-90738257 | None:intergenic |
| GGTTTACGGTAAGAGAGGGA+AGG | 0.658054 | 3.4:+90738847 | MS.gene37483:CDS |
| AAGATTTGGATCTAGTCACA+TGG | 0.660288 | 3.4:+90739516 | MS.gene37483:CDS |
| AATTTGAGTAGTGATGATGA+TGG | 0.661624 | 3.4:+90739664 | MS.gene37483:CDS |
| AAGGAACAATATCGAAGACA+AGG | 0.663403 | 3.4:+90739958 | MS.gene37483:CDS |
| CCGAGGATGCTATAGACACG+TGG | 0.685477 | 3.4:+90740058 | MS.gene37483:CDS |
| TTGAGTAGTGATGATGATGG+CGG | 0.685672 | 3.4:+90739667 | MS.gene37483:CDS |
| GGTCTCGATCAAGTTCCGGA+TGG | 0.685979 | 3.4:+90739352 | MS.gene37483:CDS |
| GATCGAGACCTAAGCAAACG+AGG | 0.703690 | 3.4:-90739339 | None:intergenic |
| CGAGACCTAAGCAAACGAGG+TGG | 0.726299 | 3.4:-90739336 | None:intergenic |
| CGTGTCTATAGCATCCTCGG+AGG | 0.738184 | 3.4:-90740055 | None:intergenic |
| TGAAAAGGGGAATCATTGTG+TGG | 0.749018 | 3.4:+90739159 | MS.gene37483:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGTTGCAAATAAAATAAAT+TGG | + | chr3.4:90739629-90739648 | MS.gene37483:CDS | 20.0% |
| !! | AGTATTAAAGATGAGTATAA+TGG | + | chr3.4:90738811-90738830 | MS.gene37483:CDS | 20.0% |
| !! | TATAAGAATTTATGGTCAAA+AGG | + | chr3.4:90739909-90739928 | MS.gene37483:CDS | 20.0% |
| !!! | AATGTGATTTTAGAGAAAAT+GGG | + | chr3.4:90739865-90739884 | MS.gene37483:CDS | 20.0% |
| !!! | ATTTTATTTGCAACCTTAAT+TGG | - | chr3.4:90739625-90739644 | None:intergenic | 20.0% |
| !!! | TAATGTGATTTTAGAGAAAA+TGG | + | chr3.4:90739864-90739883 | MS.gene37483:CDS | 20.0% |
| ! | AAATCACATTATAGAAACCA+TGG | - | chr3.4:90739855-90739874 | None:intergenic | 25.0% |
| ! | CAGTTCGATTAAAAAATCTA+CGG | + | chr3.4:90738637-90738656 | MS.gene37483:CDS | 25.0% |
| ! | GTTGCAACTATAAGAATTTA+TGG | + | chr3.4:90739901-90739920 | MS.gene37483:CDS | 25.0% |
| ! | TAAAAAATCTACGGTTACTA+CGG | + | chr3.4:90738646-90738665 | MS.gene37483:CDS | 25.0% |
| !! | TCTAAGAGAAATGTAGTTTT+TGG | - | chr3.4:90738309-90738328 | None:intergenic | 25.0% |
| !!! | GGTTTTAAAAATGAGTACAA+TGG | + | chr3.4:90738754-90738773 | MS.gene37483:CDS | 25.0% |
| !!! | GTTGATAAAGAATCAAGTTT+TGG | + | chr3.4:90738916-90738935 | MS.gene37483:CDS | 25.0% |
| AAAGAAGAGAAAGTTGAATG+TGG | + | chr3.4:90739717-90739736 | MS.gene37483:CDS | 30.0% | |
| AACACCATCATTATTTGCTT+TGG | - | chr3.4:90739257-90739276 | None:intergenic | 30.0% | |
| AATCCCTAAATAGACCTATA+TGG | + | chr3.4:90740178-90740197 | MS.gene37483:CDS | 30.0% | |
| AGTAACAATGTTGTCAAAAG+AGG | + | chr3.4:90738968-90738987 | MS.gene37483:CDS | 30.0% | |
| GAAAATGGGTAAAGTCATTT+CGG | + | chr3.4:90739879-90739898 | MS.gene37483:CDS | 30.0% | |
| GTAACAATGTTGTCAAAAGA+GGG | + | chr3.4:90738969-90738988 | MS.gene37483:CDS | 30.0% | |
| GTTTCCAAAGCAAATAATGA+TGG | + | chr3.4:90739250-90739269 | MS.gene37483:CDS | 30.0% | |
| GTTTGTTCTATTTGTGGTTT+GGG | + | chr3.4:90739274-90739293 | MS.gene37483:CDS | 30.0% | |
| TAGGTCTATTTAGGGATTTA+AGG | - | chr3.4:90740176-90740195 | None:intergenic | 30.0% | |
| TGAACCAGAAGTTACTAATT+CGG | + | chr3.4:90738709-90738728 | MS.gene37483:CDS | 30.0% | |
| TGTTTGTTCTATTTGTGGTT+TGG | + | chr3.4:90739273-90739292 | MS.gene37483:CDS | 30.0% | |
| ! | AATTTGAGTAGTGATGATGA+TGG | + | chr3.4:90739664-90739683 | MS.gene37483:CDS | 30.0% |
| ! | ATCATCAGAAGTTGATTCAT+CGG | - | chr3.4:90738552-90738571 | None:intergenic | 30.0% |
| ! | CAGATAAAGCATCAATAGTT+GGG | - | chr3.4:90739771-90739790 | None:intergenic | 30.0% |
| ! | CATATTTTGCAACAACAAGT+TGG | - | chr3.4:90739391-90739410 | None:intergenic | 30.0% |
| ! | TATAATGGAGAAGAATTCAG+AGG | + | chr3.4:90738826-90738845 | MS.gene37483:CDS | 30.0% |
| ! | TGTGAGCAAAATTTTCACTT+TGG | + | chr3.4:90739478-90739497 | MS.gene37483:CDS | 30.0% |
| ! | TTTTCACTTTGGATGTGTAA+AGG | + | chr3.4:90739489-90739508 | MS.gene37483:CDS | 30.0% |
| !! | AAAGGTATTCACTTGTTTCT+TGG | + | chr3.4:90738894-90738913 | MS.gene37483:CDS | 30.0% |
| !!! | AAAGATGTCGTTTTTAGTAG+AGG | + | chr3.4:90739805-90739824 | MS.gene37483:CDS | 30.0% |
| !!! | AAGAATCAAGTTTTGGTTTC+TGG | + | chr3.4:90738923-90738942 | MS.gene37483:CDS | 30.0% |
| !!! | AGAATCAAGTTTTGGTTTCT+GGG | + | chr3.4:90738924-90738943 | MS.gene37483:CDS | 30.0% |
| !!! | AGAGGGAGTTTATTTTATGA+TGG | + | chr3.4:90738986-90739005 | MS.gene37483:CDS | 30.0% |
| !!! | ATGTAGTTTTTGGCATTGTT+AGG | - | chr3.4:90738299-90738318 | None:intergenic | 30.0% |
| !!! | CACATTGTTGTTTGCATTTT+GGG | - | chr3.4:90739420-90739439 | None:intergenic | 30.0% |
| AAATTGACACTTGTCTTCAC+GGG | - | chr3.4:90740112-90740131 | None:intergenic | 35.0% | |
| AAGATTTGGATCTAGTCACA+TGG | + | chr3.4:90739516-90739535 | MS.gene37483:CDS | 35.0% | |
| AAGGAACAATATCGAAGACA+AGG | + | chr3.4:90739958-90739977 | MS.gene37483:CDS | 35.0% | |
| AAGGCCATATAGGTCTATTT+AGG | - | chr3.4:90740185-90740204 | None:intergenic | 35.0% | |
| ACTACTATCTTGTTGGAAGA+CGG | + | chr3.4:90739091-90739110 | MS.gene37483:CDS | 35.0% | |
| AGGCCATATAGGTCTATTTA+GGG | - | chr3.4:90740184-90740203 | None:intergenic | 35.0% | |
| CAAATTGACACTTGTCTTCA+CGG | - | chr3.4:90740113-90740132 | None:intergenic | 35.0% | |
| CAATTTCTTCGTCTCTGTTA+CGG | + | chr3.4:90738402-90738421 | MS.gene37483:CDS | 35.0% | |
| CATAAACGCTTGAATTTCCA+TGG | + | chr3.4:90739835-90739854 | MS.gene37483:CDS | 35.0% | |
| CCAACTATTGATGCTTTATC+TGG | + | chr3.4:90739769-90739788 | MS.gene37483:CDS | 35.0% | |
| CGTGTTAATTTCACTATCAC+TGG | + | chr3.4:90739028-90739047 | MS.gene37483:CDS | 35.0% | |
| GAGAAGAATTCAGAGGTTTA+CGG | + | chr3.4:90738833-90738852 | MS.gene37483:CDS | 35.0% | |
| GATGGTGTTTGTTCTATTTG+TGG | + | chr3.4:90739268-90739287 | MS.gene37483:CDS | 35.0% | |
| GCAATGTTAAAAACAGGAAC+TGG | + | chr3.4:90739542-90739561 | MS.gene37483:CDS | 35.0% | |
| GCTATTAGGGAAACCAATTA+AGG | + | chr3.4:90739609-90739628 | MS.gene37483:CDS | 35.0% | |
| GTCATTGTTGGAATGTCATA+GGG | + | chr3.4:90739117-90739136 | MS.gene37483:CDS | 35.0% | |
| TCAGGTTCTATGTTGAAATC+AGG | - | chr3.4:90738263-90738282 | None:intergenic | 35.0% | |
| TCTGTCTGAAGAAGCTATTA+GGG | + | chr3.4:90739596-90739615 | MS.gene37483:CDS | 35.0% | |
| TGGAGAGCAATGTTAAAAAC+AGG | + | chr3.4:90739536-90739555 | MS.gene37483:CDS | 35.0% | |
| TGTGTAAAGGCTACAAGATT+TGG | + | chr3.4:90739502-90739521 | MS.gene37483:CDS | 35.0% | |
| TTCTGTCTGAAGAAGCTATT+AGG | + | chr3.4:90739595-90739614 | MS.gene37483:CDS | 35.0% | |
| TTGTCTTCGATATTGTTCCT+TGG | - | chr3.4:90739959-90739978 | None:intergenic | 35.0% | |
| TTTCACTATCACTGGATTTG+AGG | + | chr3.4:90739036-90739055 | MS.gene37483:CDS | 35.0% | |
| ! | CCAGATAAAGCATCAATAGT+TGG | - | chr3.4:90739772-90739791 | None:intergenic | 35.0% |
| ! | TTTTGGCATTGTTAGGTTCT+GGG | - | chr3.4:90738292-90738311 | None:intergenic | 35.0% |
| !! | TTTTTGGCATTGTTAGGTTC+TGG | - | chr3.4:90738293-90738312 | None:intergenic | 35.0% |
| !!! | GCACATTGTTGTTTGCATTT+TGG | - | chr3.4:90739421-90739440 | None:intergenic | 35.0% |
| AAAGAGATTGAGAGAATCCG+AGG | + | chr3.4:90738430-90738449 | MS.gene37483:CDS | 40.0% | |
| ACCAGAAGTTACTAATTCGG+TGG | + | chr3.4:90738712-90738731 | MS.gene37483:CDS | 40.0% | |
| ACCATCCACTACTATCTTGT+TGG | + | chr3.4:90739084-90739103 | MS.gene37483:CDS | 40.0% | |
| AGAGTTCGCATGATGAAAAG+GGG | + | chr3.4:90739146-90739165 | MS.gene37483:CDS | 40.0% | |
| AGAGTTGCATTGAAGAAGGA+GGG | + | chr3.4:90738339-90738358 | MS.gene37483:CDS | 40.0% | |
| CAAGCAATACAAGGCCATAT+AGG | - | chr3.4:90740195-90740214 | None:intergenic | 40.0% | |
| CAGAGTTCGCATGATGAAAA+GGG | + | chr3.4:90739145-90739164 | MS.gene37483:CDS | 40.0% | |
| CCAGAAGTTACTAATTCGGT+GGG | + | chr3.4:90738713-90738732 | MS.gene37483:CDS | 40.0% | |
| GAGAAGAATTCAGACGATTG+TGG | + | chr3.4:90738776-90738795 | MS.gene37483:CDS | 40.0% | |
| GGTCATTGTTGGAATGTCAT+AGG | + | chr3.4:90739116-90739135 | MS.gene37483:CDS | 40.0% | |
| GGTTCTATGTTGAAATCAGG+AGG | - | chr3.4:90738260-90738279 | None:intergenic | 40.0% | |
| GTCTTCCAACAAGATAGTAG+TGG | - | chr3.4:90739092-90739111 | None:intergenic | 40.0% | |
| TCAGAGTTCGCATGATGAAA+AGG | + | chr3.4:90739144-90739163 | MS.gene37483:CDS | 40.0% | |
| TCTATGTTGAAATCAGGAGG+TGG | - | chr3.4:90738257-90738276 | None:intergenic | 40.0% | |
| TGAAAAGGGGAATCATTGTG+TGG | + | chr3.4:90739159-90739178 | MS.gene37483:CDS | 40.0% | |
| TTCTGAATCAACTTCTGACG+AGG | + | chr3.4:90738595-90738614 | MS.gene37483:CDS | 40.0% | |
| ! | ATCAAAGAGGGAAGGTACAA+GGG | + | chr3.4:90738871-90738890 | MS.gene37483:CDS | 40.0% |
| ! | TACTACGGTGTCAACATCAA+TGG | + | chr3.4:90738661-90738680 | MS.gene37483:CDS | 40.0% |
| ! | TATCAAAGAGGGAAGGTACA+AGG | + | chr3.4:90738870-90738889 | MS.gene37483:CDS | 40.0% |
| ! | TCCAACAAGATAGTAGTGGA+TGG | - | chr3.4:90739088-90739107 | None:intergenic | 40.0% |
| ! | TGTTCTATTTGTGGTTTGGG+AGG | + | chr3.4:90739277-90739296 | MS.gene37483:CDS | 40.0% |
| !! | TGGTTTTGCAGTGTAGTTTG+CGG | + | chr3.4:90739562-90739581 | MS.gene37483:CDS | 40.0% |
| !! | TTGAGTAGTGATGATGATGG+CGG | + | chr3.4:90739667-90739686 | MS.gene37483:CDS | 40.0% |
| !!! | CAAAAGCGTTTGGTTTTGCT+AGG | + | chr3.4:90740082-90740101 | MS.gene37483:CDS | 40.0% |
| ACGCTTAGGAGTTGAAAGCT+TGG | + | chr3.4:90740023-90740042 | MS.gene37483:CDS | 45.0% | |
| ATCAAGTTCCGGATGGTGAT+TGG | + | chr3.4:90739359-90739378 | MS.gene37483:CDS | 45.0% | |
| CAGACGATTGTGGTAGAAGA+GGG | + | chr3.4:90738786-90738805 | MS.gene37483:CDS | 45.0% | |
| CAGAGGTTTACGGTAAGAGA+GGG | + | chr3.4:90738843-90738862 | MS.gene37483:CDS | 45.0% | |
| CCCACCGAATTAGTAACTTC+TGG | - | chr3.4:90738716-90738735 | None:intergenic | 45.0% | |
| CTATCTTGTTGGAAGACGGA+AGG | + | chr3.4:90739095-90739114 | MS.gene37483:CDS | 45.0% | |
| CTTAGGTCTCGATCAAGTTC+CGG | + | chr3.4:90739348-90739367 | MS.gene37483:CDS | 45.0% | |
| GACGAAGAAATTGCTGCTAC+TGG | - | chr3.4:90738395-90738414 | None:intergenic | 45.0% | |
| GAGAAACAGTTGACACGCTT+AGG | + | chr3.4:90740009-90740028 | MS.gene37483:CDS | 45.0% | |
| GAGAGTTGCATTGAAGAAGG+AGG | + | chr3.4:90738338-90738357 | MS.gene37483:CDS | 45.0% | |
| GGACAAAACCAATCACCATC+CGG | - | chr3.4:90739370-90739389 | None:intergenic | 45.0% | |
| GGTAGCCACGAAAACTATCT+CGG | - | chr3.4:90739938-90739957 | None:intergenic | 45.0% | |
| TCAGACGATTGTGGTAGAAG+AGG | + | chr3.4:90738785-90738804 | MS.gene37483:CDS | 45.0% | |
| TCAGAGGTTTACGGTAAGAG+AGG | + | chr3.4:90738842-90738861 | MS.gene37483:CDS | 45.0% | |
| TCTTCAATGCAACTCTCGCA+GGG | - | chr3.4:90738335-90738354 | None:intergenic | 45.0% | |
| TGCGAGAGTTGCATTGAAGA+AGG | + | chr3.4:90738335-90738354 | MS.gene37483:CDS | 45.0% | |
| TTCTTCAATGCAACTCTCGC+AGG | - | chr3.4:90738336-90738355 | None:intergenic | 45.0% | |
| ! | CCCTACTTCAGAACTTGCTT+CGG | - | chr3.4:90739221-90739240 | None:intergenic | 45.0% |
| ! | GATAGTTTTCGTGGCTACCA+AGG | + | chr3.4:90739939-90739958 | MS.gene37483:CDS | 45.0% |
| ! | GGGTAGTGGTAAAAGAGGAA+AGG | + | chr3.4:90738733-90738752 | MS.gene37483:CDS | 45.0% |
| ! | GTTACTAATTCGGTGGGTAG+TGG | + | chr3.4:90738719-90738738 | MS.gene37483:CDS | 45.0% |
| !! | AGAGAGGGAAGGTATCAAAG+AGG | + | chr3.4:90738858-90738877 | MS.gene37483:CDS | 45.0% |
| !! | CCGAAGCAAGTTCTGAAGTA+GGG | + | chr3.4:90739218-90739237 | MS.gene37483:CDS | 45.0% |
| !! | GAGAGGGAAGGTATCAAAGA+GGG | + | chr3.4:90738859-90738878 | MS.gene37483:CDS | 45.0% |
| !! | GGGACTACTGTGTTTTGTTG+TGG | + | chr3.4:90738944-90738963 | MS.gene37483:CDS | 45.0% |
| !! | GGTTTTGCAGTGTAGTTTGC+GGG | + | chr3.4:90739563-90739582 | MS.gene37483:CDS | 45.0% |
| !! | TCCGAAGCAAGTTCTGAAGT+AGG | + | chr3.4:90739217-90739236 | MS.gene37483:CDS | 45.0% |
| !! | TGTTGCTTCTGCTGTTTCCT+CGG | - | chr3.4:90738450-90738469 | None:intergenic | 45.0% |
| AAAGCGACCAAGAGAATCCG+AGG | + | chr3.4:90738496-90738515 | MS.gene37483:CDS | 50.0% | |
| CAAACGAGGTGGAATGCAGA+AGG | - | chr3.4:90739328-90739347 | None:intergenic | 50.0% | |
| CCACGTGTCTATAGCATCCT+CGG | - | chr3.4:90740061-90740080 | None:intergenic | 50.0% | |
| GATCGAGACCTAAGCAAACG+AGG | - | chr3.4:90739342-90739361 | None:intergenic | 50.0% | |
| GCATTCCACCTCGTTTGCTT+AGG | + | chr3.4:90739331-90739350 | MS.gene37483:CDS | 50.0% | |
| GGAAGACGGAAGGTCATTGT+TGG | + | chr3.4:90739105-90739124 | MS.gene37483:CDS | 50.0% | |
| GGTTTACGGTAAGAGAGGGA+AGG | + | chr3.4:90738847-90738866 | MS.gene37483:CDS | 50.0% | |
| ! | ACTGGATTTGAGGCTCATGC+TGG | + | chr3.4:90739046-90739065 | MS.gene37483:CDS | 50.0% |
| ! | AGAGGGAAGGTACAAGGGAA+AGG | + | chr3.4:90738876-90738895 | MS.gene37483:CDS | 50.0% |
| ! | AGGCTCATGCTGGTTGTACA+AGG | + | chr3.4:90739056-90739075 | MS.gene37483:CDS | 50.0% |
| ! | GGTTGCCGAGATAGTTTTCG+TGG | + | chr3.4:90739930-90739949 | MS.gene37483:CDS | 50.0% |
| ! | TCGGTGGGTAGTGGTAAAAG+AGG | + | chr3.4:90738728-90738747 | MS.gene37483:CDS | 50.0% |
| ! | TGCTATTGCTGCTGCTTCCT+CGG | - | chr3.4:90738516-90738535 | None:intergenic | 50.0% |
| !! | GACACGTGGACAAAAGCGTT+TGG | + | chr3.4:90740072-90740091 | MS.gene37483:CDS | 50.0% |
| !! | GGGAAGGTATCAAAGAGGGA+AGG | + | chr3.4:90738863-90738882 | MS.gene37483:CDS | 50.0% |
| !! | TGCAGTCGAAGGGTGTTTGA+GGG | - | chr3.4:90738369-90738388 | None:intergenic | 50.0% |
| !! | TTAGGTTCTGGGCAGTTCTC+AGG | - | chr3.4:90738281-90738300 | None:intergenic | 50.0% |
| !!! | CTTGGTTTTGCATTCCTCCG+AGG | + | chr3.4:90740041-90740060 | MS.gene37483:CDS | 50.0% |
| CCGAGGATGCTATAGACACG+TGG | + | chr3.4:90740058-90740077 | MS.gene37483:CDS | 55.0% | |
| CGAGACCTAAGCAAACGAGG+TGG | - | chr3.4:90739339-90739358 | None:intergenic | 55.0% | |
| CGTGTCTATAGCATCCTCGG+AGG | - | chr3.4:90740058-90740077 | None:intergenic | 55.0% | |
| GCTGCTTCCTCGGATTCTCT+TGG | - | chr3.4:90738506-90738525 | None:intergenic | 55.0% | |
| GGTCTCGATCAAGTTCCGGA+TGG | + | chr3.4:90739352-90739371 | MS.gene37483:CDS | 55.0% | |
| !! | CTACTGGTGCTGCAGTCGAA+GGG | - | chr3.4:90738379-90738398 | None:intergenic | 55.0% |
| !! | CTGCAGTCGAAGGGTGTTTG+AGG | - | chr3.4:90738370-90738389 | None:intergenic | 55.0% |
| !! | GCTACTGGTGCTGCAGTCGA+AGG | - | chr3.4:90738380-90738399 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 90738239 | 90740215 | 90738239 | ID=MS.gene37483 |
| chr3.4 | mRNA | 90738239 | 90740215 | 90738239 | ID=MS.gene37483.t1;Parent=MS.gene37483 |
| chr3.4 | exon | 90738239 | 90740215 | 90738239 | ID=MS.gene37483.t1.exon1;Parent=MS.gene37483.t1 |
| chr3.4 | CDS | 90738239 | 90740215 | 90738239 | ID=cds.MS.gene37483.t1;Parent=MS.gene37483.t1 |
| Gene Sequence |
| Protein sequence |
