Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40278.t1 | XP_003603630.2 | 99.2 | 836 | 5 | 2 | 1 | 835 | 1 | 835 | 0.00E+00 | 1647.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40278.t1 | Q39123 | 80.0 | 829 | 151 | 9 | 16 | 835 | 11 | 833 | 0.0e+00 | 1323.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40278.t1 | G7J3H4 | 99.2 | 836 | 5 | 2 | 1 | 835 | 1 | 835 | 0.0e+00 | 1647.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene40278.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene40278 | -0.806011 | 1.01E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene40278 | -0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene40278 | -0.809532 | 1.81E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene40278 | -0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene050338 | MS.gene40278 | 0.829673 | 4.51E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene40278 | -0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene050707 | MS.gene40278 | 0.838209 | 3.30E-57 | -1.69E-46 |
| MS.gene050710 | MS.gene40278 | 0.817726 | 2.84E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene40278 | -0.839501 | 1.53E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene40278 | -0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene40278 | -0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene051438 | MS.gene40278 | -0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene051552 | MS.gene40278 | 0.827812 | 1.27E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene40278 | 0.801969 | 7.00E-49 | -1.69E-46 |
| MS.gene051749 | MS.gene40278 | 0.817451 | 3.28E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene40278 | -0.868129 | 8.21E-66 | -1.69E-46 |
| MS.gene052050 | MS.gene40278 | 0.813759 | 2.18E-51 | -1.69E-46 |
| MS.gene052129 | MS.gene40278 | 0.809776 | 1.60E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene40278 | -0.828886 | 7.00E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene40278 | -0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene40278 | -0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene40278 | -0.81621 | 6.22E-52 | -1.69E-46 |
| MS.gene053776 | MS.gene40278 | 0.805402 | 1.36E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene40278 | -0.826872 | 2.14E-54 | -1.69E-46 |
| MS.gene054107 | MS.gene40278 | -0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene054344 | MS.gene40278 | -0.830189 | 3.38E-55 | -1.69E-46 |
| MS.gene054850 | MS.gene40278 | 0.850898 | 1.26E-60 | -1.69E-46 |
| MS.gene054884 | MS.gene40278 | 0.855603 | 5.65E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene40278 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene40278 | -0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene40278 | -0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene40278 | -0.831757 | 1.39E-55 | -1.69E-46 |
| MS.gene055730 | MS.gene40278 | 0.80232 | 5.93E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene40278 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene40278 | -0.805259 | 1.46E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene40278 | -0.803794 | 2.94E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene40278 | -0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene40278 | -0.822656 | 2.11E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene40278 | -0.831854 | 1.32E-55 | -1.69E-46 |
| MS.gene056618 | MS.gene40278 | 0.818111 | 2.32E-52 | -1.69E-46 |
| MS.gene056678 | MS.gene40278 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene056688 | MS.gene40278 | 0.81859 | 1.81E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene40278 | 0.844509 | 7.24E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene40278 | -0.819408 | 1.18E-52 | -1.69E-46 |
| MS.gene057356 | MS.gene40278 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene40278 | -0.825988 | 3.47E-54 | -1.69E-46 |
| MS.gene058158 | MS.gene40278 | 0.816782 | 4.63E-52 | -1.69E-46 |
| MS.gene058382 | MS.gene40278 | 0.820181 | 7.86E-53 | -1.69E-46 |
| MS.gene058418 | MS.gene40278 | 0.835773 | 1.38E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene40278 | -0.857248 | 1.86E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene40278 | -0.837288 | 5.68E-57 | -1.69E-46 |
| MS.gene05926 | MS.gene40278 | 0.874231 | 7.94E-68 | -1.69E-46 |
| MS.gene059667 | MS.gene40278 | -0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene40278 | -0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene060405 | MS.gene40278 | 0.800635 | 1.31E-48 | -1.69E-46 |
| MS.gene061044 | MS.gene40278 | 0.805935 | 1.05E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene40278 | -0.820097 | 8.21E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40278 | MS.gene069869 | PPI |
| MS.gene76534 | MS.gene40278 | PPI |
| MS.gene85150 | MS.gene40278 | PPI |
| MS.gene40278 | MS.gene36776 | PPI |
| MS.gene36953 | MS.gene40278 | PPI |
| MS.gene36352 | MS.gene40278 | PPI |
| MS.gene36819 | MS.gene40278 | PPI |
| MS.gene072254 | MS.gene40278 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40278.t1 | MTR_3g109800 | 99.163 | 836 | 5 | 2 | 1 | 835 | 1 | 835 | 0.0 | 1712 |
| MS.gene40278.t1 | MTR_3g109800 | 99.112 | 788 | 5 | 2 | 1 | 787 | 1 | 787 | 0.0 | 1608 |
| MS.gene40278.t1 | MTR_2g101190 | 81.818 | 836 | 142 | 5 | 8 | 835 | 3 | 836 | 0.0 | 1439 |
| MS.gene40278.t1 | MTR_3g109800 | 98.867 | 706 | 6 | 2 | 1 | 705 | 1 | 705 | 0.0 | 1438 |
| MS.gene40278.t1 | MTR_8g013980 | 80.981 | 836 | 147 | 5 | 7 | 835 | 2 | 832 | 0.0 | 1431 |
| MS.gene40278.t1 | MTR_3g109800 | 98.992 | 595 | 5 | 1 | 241 | 835 | 1 | 594 | 0.0 | 1216 |
| MS.gene40278.t1 | MTR_2g030130 | 67.066 | 835 | 253 | 11 | 16 | 835 | 9 | 836 | 0.0 | 1159 |
| MS.gene40278.t1 | MTR_4g058970 | 65.380 | 829 | 272 | 8 | 16 | 835 | 24 | 846 | 0.0 | 1118 |
| MS.gene40278.t1 | MTR_2g094520 | 61.747 | 847 | 301 | 11 | 2 | 835 | 3 | 839 | 0.0 | 1052 |
| MS.gene40278.t1 | MTR_2g088470 | 23.916 | 669 | 345 | 25 | 20 | 590 | 70 | 672 | 3.60e-25 | 112 |
| MS.gene40278.t1 | MTR_8g432540 | 22.289 | 498 | 292 | 19 | 204 | 672 | 375 | 806 | 1.78e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40278.t1 | AT4G32880 | 79.976 | 829 | 151 | 9 | 16 | 835 | 11 | 833 | 0.0 | 1377 |
| MS.gene40278.t1 | AT1G52150 | 78.766 | 843 | 163 | 7 | 2 | 835 | 1 | 836 | 0.0 | 1376 |
| MS.gene40278.t1 | AT1G52150 | 78.673 | 844 | 163 | 8 | 2 | 835 | 1 | 837 | 0.0 | 1372 |
| MS.gene40278.t1 | AT1G52150 | 78.239 | 795 | 157 | 7 | 2 | 787 | 1 | 788 | 0.0 | 1279 |
| MS.gene40278.t1 | AT2G34710 | 64.802 | 858 | 273 | 10 | 1 | 835 | 1 | 852 | 0.0 | 1107 |
| MS.gene40278.t1 | AT1G30490 | 62.810 | 847 | 280 | 10 | 9 | 835 | 10 | 841 | 0.0 | 1079 |
| MS.gene40278.t1 | AT5G60690 | 63.145 | 833 | 279 | 11 | 18 | 835 | 23 | 842 | 0.0 | 1059 |
| MS.gene40278.t1 | AT5G32670 | 63.514 | 74 | 27 | 0 | 284 | 357 | 37 | 110 | 1.87e-23 | 99.4 |
| MS.gene40278.t1 | AT3G03260 | 22.053 | 721 | 405 | 32 | 15 | 637 | 19 | 680 | 1.57e-13 | 75.1 |
| MS.gene40278.t1 | AT3G03260 | 22.822 | 482 | 251 | 21 | 15 | 400 | 19 | 475 | 1.43e-12 | 71.6 |
Find 216 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATACCTGCTGCATTATC+TGG | 0.179885 | 3.3:-90990172 | None:intergenic |
| GGTTCTGTGTTGCTCTTTAA+AGG | 0.201093 | 3.3:+90989849 | MS.gene40278:CDS |
| TTTAGGCTTTACGTCATTTA+AGG | 0.223191 | 3.3:+90987699 | MS.gene40278:intron |
| TATAAATATACCTTCTGTTC+TGG | 0.245843 | 3.3:-90985254 | None:intergenic |
| CGAGTAAGCGTTTGTGCTTC+AGG | 0.246753 | 3.3:-90989620 | None:intergenic |
| TGGCACCAGGTCGCGACTTC+TGG | 0.250399 | 3.3:+90987107 | MS.gene40278:CDS |
| CAAAGCTTCCATGTTGTTAC+AGG | 0.257668 | 3.3:+90988073 | MS.gene40278:CDS |
| ATGATCAACAATATGAATTA+TGG | 0.263716 | 3.3:-90987409 | None:intergenic |
| GCACTTTCCCCTTCGCGTTT+TGG | 0.273753 | 3.3:+90989563 | MS.gene40278:CDS |
| GCTACATGGACCAGCTTTAA+TGG | 0.282319 | 3.3:-90988518 | None:intergenic |
| GGGGCCCGAGCAGGAGCTTT+TGG | 0.283710 | 3.3:+90988547 | MS.gene40278:CDS |
| ACAGCTCTCTCATAAGTTAT+TGG | 0.294717 | 3.3:-90990419 | None:intergenic |
| CTGCGAAGAGAAGTAGGTTT+TGG | 0.316368 | 3.3:-90985165 | None:intergenic |
| GCTGCGCTACACATCACTTT+TGG | 0.327871 | 3.3:+90987132 | MS.gene40278:CDS |
| CTAAAATACTTACTTGTAAG+AGG | 0.330219 | 3.3:-90988829 | None:intergenic |
| TAACCTTCATCCCGGGCATT+TGG | 0.334513 | 3.3:-90986123 | None:intergenic |
| AGCAATGAACAAACTGCTTA+TGG | 0.337413 | 3.3:+90985430 | MS.gene40278:CDS |
| TCTGTTTCATGTTCATCAAT+TGG | 0.338860 | 3.3:+90990483 | MS.gene40278:CDS |
| ACGAAAACCAGAAGGCAAAA+TGG | 0.343351 | 3.3:-90989184 | None:intergenic |
| AACCTAAACAGATCAAAGTT+TGG | 0.353061 | 3.3:+90985229 | MS.gene40278:CDS |
| CCAAGGGATGCAAGCCCTGC+TGG | 0.354906 | 3.3:+90985868 | MS.gene40278:CDS |
| GCACTTGAGGTTGGAACCAC+TGG | 0.370337 | 3.3:+90989377 | MS.gene40278:CDS |
| TAAAGTGGGCGCAAAACTTC+AGG | 0.378668 | 3.3:-90987544 | None:intergenic |
| AACCAAACTTTGATCTGTTT+AGG | 0.378767 | 3.3:-90985231 | None:intergenic |
| AATGTTATGTCCACAGGAAA+TGG | 0.379586 | 3.3:+90986914 | MS.gene40278:CDS |
| TCAAGTGCTTCCACTTGCTC+TGG | 0.381079 | 3.3:-90985123 | None:intergenic |
| TTGAGAACATGGGCTACTAT+AGG | 0.388073 | 3.3:+90988777 | MS.gene40278:CDS |
| AGGAAGTTAATTACCCTTGC+AGG | 0.390715 | 3.3:-90986745 | None:intergenic |
| AGGATGATGGCAGTGAGTTC+AGG | 0.392334 | 3.3:+90985045 | None:intergenic |
| CCAGCAGGGCTTGCATCCCT+TGG | 0.392669 | 3.3:-90985868 | None:intergenic |
| CAGGCACGTGCAGCCACTCC+AGG | 0.395142 | 3.3:-90986703 | None:intergenic |
| CGACCTGGTGCCAGAGTTGT+TGG | 0.396680 | 3.3:-90987097 | None:intergenic |
| AAAGCTCCTGCTCGGGCCCC+TGG | 0.404062 | 3.3:-90988544 | None:intergenic |
| TGAGAACATGGGCTACTATA+GGG | 0.407729 | 3.3:+90988778 | MS.gene40278:CDS |
| CTTGCTTCTGCACTTGAGGT+TGG | 0.412761 | 3.3:+90989368 | MS.gene40278:CDS |
| GGGTGACAATTCAGGTCATT+CGG | 0.414286 | 3.3:+90989412 | MS.gene40278:CDS |
| CAGGGTTTCATGTGTATTCA+AGG | 0.417991 | 3.3:+90990368 | MS.gene40278:intron |
| GTTGAGTGGGTCCAAATGCC+CGG | 0.418997 | 3.3:+90986112 | MS.gene40278:CDS |
| TCAGAGAAAGATGCATCAAT+TGG | 0.421642 | 3.3:-90989153 | None:intergenic |
| GCTGGTCCATGTAGCTTGCC+AGG | 0.423708 | 3.3:+90988526 | MS.gene40278:CDS |
| CTTCCCCATCCTGTCACACT+TGG | 0.428131 | 3.3:-90987746 | None:intergenic |
| TTTACGTTTGCGAATCAAGC+TGG | 0.434930 | 3.3:+90990050 | MS.gene40278:CDS |
| GGTGACAATTCAGGTCATTC+GGG | 0.437203 | 3.3:+90989413 | MS.gene40278:CDS |
| CGAAAACCAGAAGGCAAAAT+GGG | 0.440093 | 3.3:-90989183 | None:intergenic |
| GCACGTGCCTGCGGCCTCGT+GGG | 0.440499 | 3.3:+90986715 | MS.gene40278:CDS |
| AATCGATACTTAAATCCCTT+TGG | 0.442177 | 3.3:+90989812 | MS.gene40278:CDS |
| AGCTTGCCAGGGGCCCGAGC+AGG | 0.444554 | 3.3:+90988538 | MS.gene40278:CDS |
| GTTTGTGCTTCAGGAGTTCC+AGG | 0.444785 | 3.3:-90989611 | None:intergenic |
| CGATCTTGCTTCTGCACTTG+AGG | 0.446890 | 3.3:+90989364 | MS.gene40278:CDS |
| GGTGGATCTGTAACAGCTAT+AGG | 0.449783 | 3.3:+90989642 | MS.gene40278:CDS |
| ACCACCAAAAGCTCCTGCTC+GGG | 0.452836 | 3.3:-90988551 | None:intergenic |
| CATTGAATTGCTTTACATGC+AGG | 0.453193 | 3.3:+90986943 | MS.gene40278:CDS |
| ACCATGAGAGCCTATCTTTG+AGG | 0.453750 | 3.3:-90986862 | None:intergenic |
| CTGCGATATTATCTTGAAGA+TGG | 0.455006 | 3.3:-90989484 | None:intergenic |
| CTGTAACAACATGGAAGCTT+TGG | 0.455633 | 3.3:-90988072 | None:intergenic |
| CGGGCCCCTGGCAAGCTACA+TGG | 0.457289 | 3.3:-90988532 | None:intergenic |
| GAAGGTTACAAGCTGTGAAC+AGG | 0.458532 | 3.3:+90985399 | MS.gene40278:CDS |
| GCAGGGCTTGCATCCCTTGG+TGG | 0.461144 | 3.3:-90985865 | None:intergenic |
| GACCACCAAAAGCTCCTGCT+CGG | 0.462737 | 3.3:-90988552 | None:intergenic |
| GCTTGCTCAGAGAACAACTA+TGG | 0.463260 | 3.3:+90987582 | MS.gene40278:CDS |
| GGTTATCAAGCTTGAGAACA+TGG | 0.465661 | 3.3:+90988766 | MS.gene40278:CDS |
| CTATACCTGCTGCATTATCT+GGG | 0.466306 | 3.3:-90990171 | None:intergenic |
| GCAATTTCTCATGGTTCCCC+TGG | 0.467349 | 3.3:+90986685 | MS.gene40278:CDS |
| TTGCTGAAATCCTCAAAGAT+AGG | 0.468317 | 3.3:+90986852 | MS.gene40278:CDS |
| GATTCAACGAAGCTGTCAAC+GGG | 0.469615 | 3.3:+90987901 | MS.gene40278:CDS |
| TTCATCACCTAGCAAGATGA+TGG | 0.470764 | 3.3:+90987989 | MS.gene40278:CDS |
| GATGGGCTTCAAATGCAAAC+TGG | 0.472343 | 3.3:-90989466 | None:intergenic |
| CATCTTCCTCAGCTTTGTAG+TGG | 0.473433 | 3.3:+90989084 | MS.gene40278:intron |
| GAGTTTCTATCAAAGGCTAC+TGG | 0.476434 | 3.3:+90986082 | MS.gene40278:CDS |
| TTCTCATGGTTCCCCTGGAG+TGG | 0.477241 | 3.3:+90986690 | MS.gene40278:CDS |
| CTCAGCCAAGTGTGACAGGA+TGG | 0.477876 | 3.3:+90987741 | MS.gene40278:CDS |
| TGCACGTGCCTGCGGCCTCG+TGG | 0.486826 | 3.3:+90986714 | MS.gene40278:CDS |
| TAGCCTGGTCCGGATTCCAT+TGG | 0.487508 | 3.3:+90986655 | MS.gene40278:intron |
| TGGTATTTGTTTATCCAGCA+TGG | 0.488354 | 3.3:+90990391 | MS.gene40278:CDS |
| GTTTCTCAGCCAAGTGTGAC+AGG | 0.488578 | 3.3:+90987737 | MS.gene40278:CDS |
| GGTTCAATATGAGAGAGAAT+AGG | 0.490102 | 3.3:-90985210 | None:intergenic |
| CAGCCAAGTGTGACAGGATG+GGG | 0.491303 | 3.3:+90987743 | MS.gene40278:CDS |
| GCTCTAACAAAATGCGGCAC+TGG | 0.492687 | 3.3:-90987336 | None:intergenic |
| GGTCCAAATGCCCGGGATGA+AGG | 0.494227 | 3.3:+90986120 | MS.gene40278:CDS |
| GCGGGAACACAGATCAGAAT+GGG | 0.495304 | 3.3:+90988462 | MS.gene40278:CDS |
| GGTATTTGTTTATCCAGCAT+GGG | 0.496206 | 3.3:+90990392 | MS.gene40278:CDS |
| TTTAGCAGAGTTTCTATCAA+AGG | 0.497850 | 3.3:+90986075 | MS.gene40278:CDS |
| ATTCCAATGGAATCCGGACC+AGG | 0.499148 | 3.3:-90986658 | None:intergenic |
| TGCGGCACTGGAGGCATACT+AGG | 0.502619 | 3.3:-90987324 | None:intergenic |
| TGCGATATTATCTTGAAGAT+GGG | 0.503723 | 3.3:-90989483 | None:intergenic |
| AGTTATTGGCCTCCCCATGC+TGG | 0.504544 | 3.3:-90990405 | None:intergenic |
| TACTGGAACCGCTGTTGAGT+GGG | 0.504776 | 3.3:+90986099 | MS.gene40278:CDS |
| GTTCTAAATGTTATGTCCAC+AGG | 0.505259 | 3.3:+90986908 | MS.gene40278:CDS |
| GAGAAGCAGAGGAAAGAAGC+TGG | 0.505430 | 3.3:+90985377 | MS.gene40278:CDS |
| AAGATGATGGGACTAAATCT+TGG | 0.505856 | 3.3:+90988002 | MS.gene40278:CDS |
| GCAACGATTCCAATGGAATC+CGG | 0.506436 | 3.3:-90986664 | None:intergenic |
| CTAAGCGCACGTAGAGCTGC+AGG | 0.508511 | 3.3:-90987773 | None:intergenic |
| TTTGGCACATAGCACAGAAC+TGG | 0.509436 | 3.3:-90988054 | None:intergenic |
| CTAAATCTTGGTTATAACAA+TGG | 0.512081 | 3.3:+90988014 | MS.gene40278:CDS |
| AGGGATGATATTACAATGCC+TGG | 0.513022 | 3.3:+90988797 | MS.gene40278:CDS |
| GGAACCACTGGAAACAAAGC+AGG | 0.514125 | 3.3:+90989389 | MS.gene40278:CDS |
| TGTTGCCTGCGAAGAGAAGT+AGG | 0.514330 | 3.3:-90985171 | None:intergenic |
| GTGAGTTCAGGATGCAAAGA+TGG | 0.514612 | 3.3:+90985057 | MS.gene40278:CDS |
| TCCTCAGCTTTGTAGTGGAG+TGG | 0.515145 | 3.3:+90989089 | MS.gene40278:intron |
| CTGAAGCACAAACGCTTACT+CGG | 0.516996 | 3.3:+90989621 | MS.gene40278:CDS |
| TCCTCAAAGATAGGCTCTCA+TGG | 0.518370 | 3.3:+90986861 | MS.gene40278:CDS |
| TCGTGGGTCTTGAACCTGCA+AGG | 0.518555 | 3.3:+90986731 | MS.gene40278:CDS |
| TCAGCAGCTGCCATTAAAGC+TGG | 0.518942 | 3.3:+90988508 | MS.gene40278:CDS |
| GCAAGATCGAGTGTGCGGTT+AGG | 0.519277 | 3.3:-90989350 | None:intergenic |
| GGAATCGTTGCAATTTCTCA+TGG | 0.524738 | 3.3:+90986676 | MS.gene40278:CDS |
| TTTAGTCCCATCATCTTGCT+AGG | 0.525629 | 3.3:-90987996 | None:intergenic |
| AACTCGTGTCCGTAGTGGCA+AGG | 0.527560 | 3.3:-90985810 | None:intergenic |
| CGCATCTGAGTGATGCCAAA+GGG | 0.530194 | 3.3:-90989827 | None:intergenic |
| GTTGTATGCGCCAACAACTC+TGG | 0.530549 | 3.3:+90987087 | MS.gene40278:intron |
| TGCGGGAACACAGATCAGAA+TGG | 0.530863 | 3.3:+90988461 | MS.gene40278:CDS |
| GAAAAGATATTTGATGACAA+TGG | 0.533386 | 3.3:+90990122 | MS.gene40278:CDS |
| CTGGTCCATGTAGCTTGCCA+GGG | 0.538428 | 3.3:+90988527 | MS.gene40278:CDS |
| CTGCATGTAAAGCAATTCAA+TGG | 0.540926 | 3.3:-90986942 | None:intergenic |
| AGCAACCAGAAGTCGCGACC+TGG | 0.542154 | 3.3:-90987112 | None:intergenic |
| TCAGCCAAGTGTGACAGGAT+GGG | 0.542398 | 3.3:+90987742 | MS.gene40278:CDS |
| TCAAGATAATATCGCAGCTA+TGG | 0.544488 | 3.3:+90989490 | MS.gene40278:CDS |
| CAAGGGATGCAAGCCCTGCT+GGG | 0.545537 | 3.3:+90985869 | MS.gene40278:CDS |
| TGCTCAATTGTGTGAGCTAG+TGG | 0.546269 | 3.3:-90988586 | None:intergenic |
| TGATGTCTTGAAGTGCAACC+AGG | 0.546715 | 3.3:-90990094 | None:intergenic |
| TCACTTAACAACACACAGAA+TGG | 0.547612 | 3.3:+90987300 | MS.gene40278:CDS |
| CTGATTAGACCCTGTGAAGG+AGG | 0.548637 | 3.3:+90987381 | MS.gene40278:CDS |
| GTCAACGGGTTTACAGATGA+TGG | 0.550490 | 3.3:+90987915 | MS.gene40278:CDS |
| TGATTAGACCCTGTGAAGGA+GGG | 0.553128 | 3.3:+90987382 | MS.gene40278:CDS |
| TTCAAGACCCACGAGGCCGC+AGG | 0.553773 | 3.3:-90986722 | None:intergenic |
| ACAGACGACCCTTGCCACTA+CGG | 0.558722 | 3.3:+90985801 | MS.gene40278:intron |
| TATTTGATGACTTACCCAGC+AGG | 0.561038 | 3.3:-90985883 | None:intergenic |
| TGCTAAAGTCTCCTCTGCAA+TGG | 0.562754 | 3.3:-90986059 | None:intergenic |
| GTATTTGTTTATCCAGCATG+GGG | 0.564375 | 3.3:+90990393 | MS.gene40278:CDS |
| GTCCTTGTAGAATGTCCCTC+CGG | 0.565212 | 3.3:+90988420 | MS.gene40278:intron |
| AGCATGGATGACTCATAAAG+TGG | 0.566145 | 3.3:-90987559 | None:intergenic |
| TTTGGAGGATGGCAGTCTTG+TGG | 0.566818 | 3.3:+90987150 | MS.gene40278:CDS |
| GCAGAACTACTTAAATGTGA+AGG | 0.568295 | 3.3:+90989784 | MS.gene40278:CDS |
| AGGGTAATTAACCTTCATCC+CGG | 0.569520 | 3.3:-90986131 | None:intergenic |
| AAGTTTGGTTCCAGAACAGA+AGG | 0.569991 | 3.3:+90985244 | MS.gene40278:CDS |
| TCTGAGAACCAAAACGCGAA+GGG | 0.570540 | 3.3:-90989571 | None:intergenic |
| AATGGTTCCTCCATTTCCTG+TGG | 0.571463 | 3.3:-90986924 | None:intergenic |
| GATTAGACCCTGTGAAGGAG+GGG | 0.573104 | 3.3:+90987383 | MS.gene40278:CDS |
| AGAAATTGCAACGATTCCAA+TGG | 0.574191 | 3.3:-90986671 | None:intergenic |
| ACTCGTGTCCGTAGTGGCAA+GGG | 0.576336 | 3.3:-90985809 | None:intergenic |
| CAAAACCTACTTCTCTTCGC+AGG | 0.577384 | 3.3:+90985166 | MS.gene40278:CDS |
| GCAGGTGCAGAGAGAAGCAG+AGG | 0.578902 | 3.3:+90985366 | MS.gene40278:intron |
| AAAACTTCAGGCACACTCCA+AGG | 0.579548 | 3.3:-90987532 | None:intergenic |
| AGGCACGTGCAGCCACTCCA+GGG | 0.585841 | 3.3:-90986702 | None:intergenic |
| CTACTGGAACCGCTGTTGAG+TGG | 0.586215 | 3.3:+90986098 | MS.gene40278:CDS |
| TTCTGAGAACCAAAACGCGA+AGG | 0.588476 | 3.3:-90989572 | None:intergenic |
| AAGGTACACACCAGAGCAAG+TGG | 0.590467 | 3.3:+90985113 | MS.gene40278:CDS |
| CTAACAAAATGCGGCACTGG+AGG | 0.590611 | 3.3:-90987333 | None:intergenic |
| TGGTCTATGTTAGATAGTGA+TGG | 0.594042 | 3.3:+90987939 | MS.gene40278:CDS |
| GTGTGACAGGATGGGGAAGG+CGG | 0.594930 | 3.3:+90987750 | MS.gene40278:CDS |
| TGGACAATGGAAAGTACGTA+AGG | 0.595746 | 3.3:+90985094 | MS.gene40278:CDS |
| TGGTCCATGTAGCTTGCCAG+GGG | 0.596219 | 3.3:+90988528 | MS.gene40278:CDS |
| CTTATGAGAGAGCTGTAGCA+TGG | 0.596800 | 3.3:+90990426 | MS.gene40278:CDS |
| GCGCCAACAACTCTGGCACC+AGG | 0.600039 | 3.3:+90987094 | MS.gene40278:CDS |
| CGTGGGTCTTGAACCTGCAA+GGG | 0.600458 | 3.3:+90986732 | MS.gene40278:CDS |
| TTGAGTGGGTCCAAATGCCC+GGG | 0.600560 | 3.3:+90986113 | MS.gene40278:CDS |
| GGATTCAACGAAGCTGTCAA+CGG | 0.601339 | 3.3:+90987900 | MS.gene40278:CDS |
| CAGAACTACTTAAATGTGAA+GGG | 0.602255 | 3.3:+90989785 | MS.gene40278:CDS |
| ACAGAACTGGTGGTGACAGA+TGG | 0.602468 | 3.3:-90988041 | None:intergenic |
| GGGTAATTAACCTTCATCCC+GGG | 0.604192 | 3.3:-90986130 | None:intergenic |
| TCATCACCTAGCAAGATGAT+GGG | 0.607665 | 3.3:+90987990 | MS.gene40278:CDS |
| TTTGTTTATCCAGCATGGGG+AGG | 0.608499 | 3.3:+90990396 | MS.gene40278:CDS |
| GTTATGTCCACAGGAAATGG+AGG | 0.608625 | 3.3:+90986917 | MS.gene40278:CDS |
| GCATGGATGACTCATAAAGT+GGG | 0.609344 | 3.3:-90987558 | None:intergenic |
| AGCAAGATAGCAATGGACAA+TGG | 0.610868 | 3.3:+90985081 | MS.gene40278:CDS |
| AGCAGAGGAAAGAAGCTGGA+AGG | 0.615005 | 3.3:+90985381 | MS.gene40278:CDS |
| GGAGTGGCTGCACGTGCCTG+CGG | 0.616801 | 3.3:+90986706 | MS.gene40278:CDS |
| ATTAGACCCTGTGAAGGAGG+GGG | 0.617333 | 3.3:+90987384 | MS.gene40278:CDS |
| GGAGTGGACGAGCATGCAGT+TGG | 0.618690 | 3.3:+90989105 | MS.gene40278:CDS |
| ATTTGATGACTTACCCAGCA+GGG | 0.619457 | 3.3:-90985882 | None:intergenic |
| AGATGGTAGCAAGATAGCAA+TGG | 0.621096 | 3.3:+90985074 | MS.gene40278:CDS |
| AGGTGATGAATTCACAAGAA+GGG | 0.622669 | 3.3:-90987976 | None:intergenic |
| CATACCTCTTGAATCTAGCA+CGG | 0.625244 | 3.3:+90989209 | MS.gene40278:CDS |
| CTCACAACTCGTGTCCGTAG+TGG | 0.627252 | 3.3:-90985815 | None:intergenic |
| GGCACATAGCACAGAACTGG+TGG | 0.630842 | 3.3:-90988051 | None:intergenic |
| CGGTCAGCAGCATCCACCAA+GGG | 0.631326 | 3.3:+90985852 | MS.gene40278:CDS |
| TAGGTGATGAATTCACAAGA+AGG | 0.633200 | 3.3:-90987977 | None:intergenic |
| GGCACGTGCAGCCACTCCAG+GGG | 0.635325 | 3.3:-90986701 | None:intergenic |
| AATGAACAAACTGCTTATGG+AGG | 0.636215 | 3.3:+90985433 | MS.gene40278:CDS |
| ATCTAAGAAGAATAGCCGGA+GGG | 0.640469 | 3.3:-90988435 | None:intergenic |
| CCGCATCTGAGTGATGCCAA+AGG | 0.646305 | 3.3:-90989828 | None:intergenic |
| ACGGGTTTACAGATGATGGA+TGG | 0.646531 | 3.3:+90987919 | MS.gene40278:CDS |
| CTGAGAACCAAAACGCGAAG+GGG | 0.646857 | 3.3:-90989570 | None:intergenic |
| TGTTCTCTGAGCAAGCAGCA+TGG | 0.647938 | 3.3:-90987575 | None:intergenic |
| ATACCTGCTGCATTATCTGG+GGG | 0.648878 | 3.3:-90990169 | None:intergenic |
| GTTATCAAGCTTGAGAACAT+GGG | 0.649916 | 3.3:+90988767 | MS.gene40278:CDS |
| TATACCTGCTGCATTATCTG+GGG | 0.653102 | 3.3:-90990170 | None:intergenic |
| CAAGTGTGACAGGATGGGGA+AGG | 0.654511 | 3.3:+90987747 | MS.gene40278:CDS |
| TGTAAGAGGAAAATATCACC+AGG | 0.656562 | 3.3:-90988815 | None:intergenic |
| CTTGCCGTGCTAGATTCAAG+AGG | 0.658066 | 3.3:-90989213 | None:intergenic |
| ACTTCAGCTCTAACAAAATG+CGG | 0.660310 | 3.3:-90987342 | None:intergenic |
| GGACACGAGTTGTGAGTCAG+TGG | 0.661062 | 3.3:+90985822 | MS.gene40278:CDS |
| GAATGATACCTGTAACAACA+TGG | 0.661449 | 3.3:-90988081 | None:intergenic |
| GATGTCTTGAAGTGCAACCA+GGG | 0.661753 | 3.3:-90990093 | None:intergenic |
| TCACACAATTGAGCACGAAG+AGG | 0.662824 | 3.3:+90988594 | MS.gene40278:CDS |
| GAACCACTGGAAACAAAGCA+GGG | 0.663545 | 3.3:+90989390 | MS.gene40278:CDS |
| GCGGTCAGCAGCATCCACCA+AGG | 0.664352 | 3.3:+90985851 | MS.gene40278:CDS |
| GGTATGATACGAAAACCAGA+AGG | 0.665928 | 3.3:-90989192 | None:intergenic |
| GGTCTAATCAGATAACCGCT+AGG | 0.667041 | 3.3:-90987369 | None:intergenic |
| AATCTAAGAAGAATAGCCGG+AGG | 0.667152 | 3.3:-90988436 | None:intergenic |
| AAAACGTGTTCTCGTACACA+AGG | 0.669091 | 3.3:-90985487 | None:intergenic |
| CCTTTGGCATCACTCAGATG+CGG | 0.670379 | 3.3:+90989828 | MS.gene40278:CDS |
| TTCTGTAATACAGTTCATGG+AGG | 0.670808 | 3.3:+90988745 | MS.gene40278:intron |
| TATCTGATTAGACCCTGTGA+AGG | 0.676545 | 3.3:+90987378 | MS.gene40278:CDS |
| TGTGAGTCAGTGGTAACAAG+CGG | 0.679277 | 3.3:+90985832 | MS.gene40278:CDS |
| AAGCACAAACGCTTACTCGG+TGG | 0.679968 | 3.3:+90989624 | MS.gene40278:CDS |
| CAGAAGCAAGATCGAGTGTG+CGG | 0.682497 | 3.3:-90989355 | None:intergenic |
| ACCACTGGAAACAAAGCAGG+GGG | 0.697026 | 3.3:+90989392 | MS.gene40278:CDS |
| TGTGCTTCAGGAGTTCCAGG+TGG | 0.700188 | 3.3:-90989608 | None:intergenic |
| CATTTGGACCCACTCAACAG+CGG | 0.704277 | 3.3:-90986107 | None:intergenic |
| TGACATGCTTGAAACCACCC+TGG | 0.704585 | 3.3:+90990076 | MS.gene40278:CDS |
| GGTTTCATGTGTATTCAAGG+TGG | 0.704702 | 3.3:+90990371 | MS.gene40278:CDS |
| GTATCGTGATTGTCGAACTG+TGG | 0.710790 | 3.3:+90986883 | MS.gene40278:CDS |
| AACCACTGGAAACAAAGCAG+GGG | 0.710996 | 3.3:+90989391 | MS.gene40278:CDS |
| AGAGCTGAAGTGTTGCCTAG+CGG | 0.716290 | 3.3:+90987354 | MS.gene40278:CDS |
| GTCTTGAAGTGCAACCAGGG+TGG | 0.726402 | 3.3:-90990090 | None:intergenic |
| TTGCAGGTTCAAGACCCACG+AGG | 0.774422 | 3.3:-90986729 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGTATATTTATAATTTATT+TGG | + | chr3.3:90985264-90985283 | MS.gene40278:intron | 10.0% |
| !! | CTAAAACATTATATTATATA+AGG | - | chr3.3:90989974-90989993 | None:intergenic | 10.0% |
| !! | TTAATAAATTAATAATGAAG+AGG | - | chr3.3:90986772-90986791 | None:intergenic | 10.0% |
| !!! | TATTTTATAGAATAAGTAAA+AGG | - | chr3.3:90987460-90987479 | None:intergenic | 10.0% |
| !!! | TTTTAACAATATCAATATTT+AGG | + | chr3.3:90987266-90987285 | MS.gene40278:intron | 10.0% |
| !! | AAAAATAGTGAATGTTATTA+AGG | - | chr3.3:90986287-90986306 | None:intergenic | 15.0% |
| !! | AATATAATATATAGTACTCA+AGG | - | chr3.3:90988183-90988202 | None:intergenic | 15.0% |
| !! | AATTTATTTGGCAAATTAAA+AGG | + | chr3.3:90985276-90985295 | MS.gene40278:intron | 15.0% |
| !! | ATATAATATATAGTACTCAA+GGG | - | chr3.3:90988182-90988201 | None:intergenic | 15.0% |
| !! | ATTTATTTGGCAAATTAAAA+GGG | + | chr3.3:90985277-90985296 | MS.gene40278:intron | 15.0% |
| !!! | TAACGATATATGAAATATTT+TGG | + | chr3.3:90990343-90990362 | MS.gene40278:intron | 15.0% |
| !!! | TAGCTAAAATCATTATTTTA+AGG | + | chr3.3:90985684-90985703 | MS.gene40278:intron | 15.0% |
| !!! | TATTTTTTCTGATAAGAATT+TGG | + | chr3.3:90989887-90989906 | MS.gene40278:intron | 15.0% |
| !!! | TTAAAATAATGATTTTAGCT+AGG | - | chr3.3:90985685-90985704 | None:intergenic | 15.0% |
| !! | AAATAAAAGGTAAAGAAAGT+AGG | - | chr3.3:90986154-90986173 | None:intergenic | 20.0% |
| !! | AAATACATGTAGTAAATGTT+TGG | - | chr3.3:90988370-90988389 | None:intergenic | 20.0% |
| !! | AACATTTACATCACATAATT+AGG | - | chr3.3:90986601-90986620 | None:intergenic | 20.0% |
| !! | AACTGAAAGTTAAGTAAATA+TGG | - | chr3.3:90987485-90987504 | None:intergenic | 20.0% |
| !! | AAGAAAAATTACATCACATA+AGG | - | chr3.3:90986495-90986514 | None:intergenic | 20.0% |
| !! | AATAAAAGGTAAAGAAAGTA+GGG | - | chr3.3:90986153-90986172 | None:intergenic | 20.0% |
| !! | AATTAAGAAGGTGAAATAAA+AGG | - | chr3.3:90986167-90986186 | None:intergenic | 20.0% |
| !! | AGTAAAATAGCAAAATACAA+GGG | - | chr3.3:90985913-90985932 | None:intergenic | 20.0% |
| !! | AGTATAGTACTATAGTTATA+TGG | - | chr3.3:90985944-90985963 | None:intergenic | 20.0% |
| !! | ATAAAGGGAATAAATTAAGA+AGG | - | chr3.3:90986179-90986198 | None:intergenic | 20.0% |
| !! | ATATAACTATAGTACTATAC+TGG | + | chr3.3:90985943-90985962 | MS.gene40278:intron | 20.0% |
| !! | ATCTCATTAGTGTTAATTAA+AGG | + | chr3.3:90986327-90986346 | MS.gene40278:intron | 20.0% |
| !! | ATGATCAACAATATGAATTA+TGG | - | chr3.3:90987412-90987431 | None:intergenic | 20.0% |
| !! | ATGATCATAAAAGAAATGTT+AGG | + | chr3.3:90985628-90985647 | MS.gene40278:intron | 20.0% |
| !! | TAAAGGTAAAAAAATCAATC+AGG | - | chr3.3:90986463-90986482 | None:intergenic | 20.0% |
| !! | TAAATTAATAATGAAGAGGA+AGG | - | chr3.3:90986768-90986787 | None:intergenic | 20.0% |
| !! | TACTATGTAATGCAAATAAA+GGG | - | chr3.3:90986194-90986213 | None:intergenic | 20.0% |
| !! | TAGTAAAATAGCAAAATACA+AGG | - | chr3.3:90985914-90985933 | None:intergenic | 20.0% |
| !! | TTTACCTTCAAATCTATATA+TGG | - | chr3.3:90987633-90987652 | None:intergenic | 20.0% |
| !!! | AAAAGAAAATATAAGAGTGT+TGG | - | chr3.3:90986578-90986597 | None:intergenic | 20.0% |
| !!! | AATTTAAATATGATTTTGGC+AGG | + | chr3.3:90990016-90990035 | MS.gene40278:intron | 20.0% |
| !!! | ATTGAAAGATTCTTTCATTT+TGG | + | chr3.3:90986387-90986406 | MS.gene40278:intron | 20.0% |
| !!! | TAATTACATTTTGTGTATGT+TGG | - | chr3.3:90985517-90985536 | None:intergenic | 20.0% |
| !!! | TACTTCCTTTTTATTTTACA+GGG | + | chr3.3:90987878-90987897 | MS.gene40278:intron | 20.0% |
| !!! | TTACTTCCTTTTTATTTTAC+AGG | + | chr3.3:90987877-90987896 | MS.gene40278:intron | 20.0% |
| !!! | TTGAAAGATTCTTTCATTTT+GGG | + | chr3.3:90986388-90986407 | MS.gene40278:intron | 20.0% |
| ! | AAAAATCTAAGAAGAATAGC+CGG | - | chr3.3:90988442-90988461 | None:intergenic | 25.0% |
| ! | AATAGATATGTTCAAGAGAA+TGG | - | chr3.3:90988859-90988878 | None:intergenic | 25.0% |
| ! | AATTACATCACATAAGGAAA+AGG | - | chr3.3:90986489-90986508 | None:intergenic | 25.0% |
| ! | ATGATGATCTTAATCATGTT+CGG | + | chr3.3:90989724-90989743 | MS.gene40278:intron | 25.0% |
| ! | ATGTAAGAGATAACAAAATC+AGG | - | chr3.3:90988633-90988652 | None:intergenic | 25.0% |
| ! | ATTACATCACATAAGGAAAA+GGG | - | chr3.3:90986488-90986507 | None:intergenic | 25.0% |
| ! | ATTGCCATATATAGATTTGA+AGG | + | chr3.3:90987626-90987645 | MS.gene40278:intron | 25.0% |
| ! | CTAAAATACTTACTTGTAAG+AGG | - | chr3.3:90988832-90988851 | None:intergenic | 25.0% |
| ! | CTAAATCTTGGTTATAACAA+TGG | + | chr3.3:90988014-90988033 | MS.gene40278:CDS | 25.0% |
| ! | GTACTATGTAATGCAAATAA+AGG | - | chr3.3:90986195-90986214 | None:intergenic | 25.0% |
| ! | TATAAATATACCTTCTGTTC+TGG | - | chr3.3:90985257-90985276 | None:intergenic | 25.0% |
| ! | TCTTAGTCACAATAATAACT+TGG | + | chr3.3:90987003-90987022 | MS.gene40278:intron | 25.0% |
| ! | TTCAAATCTATATATGGCAA+TGG | - | chr3.3:90987627-90987646 | None:intergenic | 25.0% |
| ! | TTGGAATAGTACTAAGTTAT+TGG | + | chr3.3:90988220-90988239 | MS.gene40278:intron | 25.0% |
| !! | AAAGAGTATGTTGATGTTAA+CGG | + | chr3.3:90990212-90990231 | MS.gene40278:intron | 25.0% |
| !! | AGTAAAAAAAGAAGTTGGTT+TGG | - | chr3.3:90986251-90986270 | None:intergenic | 25.0% |
| !! | CTATTCTTCTTAGATTTTTG+CGG | + | chr3.3:90988443-90988462 | MS.gene40278:CDS | 25.0% |
| !! | GAAAAGATATTTGATGACAA+TGG | + | chr3.3:90990122-90990141 | MS.gene40278:CDS | 25.0% |
| !! | GAATGTTATTAAGGTTTGTT+TGG | - | chr3.3:90986278-90986297 | None:intergenic | 25.0% |
| !! | GTCATCAAATATCTTTTCTA+GGG | - | chr3.3:90990120-90990139 | None:intergenic | 25.0% |
| !! | TATTCTTCTTAGATTTTTGC+GGG | + | chr3.3:90988444-90988463 | MS.gene40278:CDS | 25.0% |
| !! | TGATTTTACTGATGTCAAAA+TGG | - | chr3.3:90988315-90988334 | None:intergenic | 25.0% |
| !! | TGTCATCAAATATCTTTTCT+AGG | - | chr3.3:90990121-90990140 | None:intergenic | 25.0% |
| !! | TTAAGTTTTACTAGTGTGTT+TGG | + | chr3.3:90988201-90988220 | MS.gene40278:intron | 25.0% |
| !! | TTTTCTGATAAGAATTTGGT+TGG | + | chr3.3:90989891-90989910 | MS.gene40278:intron | 25.0% |
| !!! | AATTTTTTCGTCAACTAAGT+CGG | + | chr3.3:90986414-90986433 | MS.gene40278:intron | 25.0% |
| !!! | ACTTCCTTTTTATTTTACAG+GGG | + | chr3.3:90987879-90987898 | MS.gene40278:intron | 25.0% |
| !!! | ATATGAAATATTTTGGTGCA+GGG | + | chr3.3:90990350-90990369 | MS.gene40278:intron | 25.0% |
| !!! | GTGTTGTTTATTAATTTTGC+AGG | + | chr3.3:90985348-90985367 | MS.gene40278:intron | 25.0% |
| !!! | TATATGAAATATTTTGGTGC+AGG | + | chr3.3:90990349-90990368 | MS.gene40278:intron | 25.0% |
| !!! | TATTTTTAACTGCATTGGTA+TGG | + | chr3.3:90986300-90986319 | MS.gene40278:intron | 25.0% |
| !!! | TTCACTATTTTTAACTGCAT+TGG | + | chr3.3:90986295-90986314 | MS.gene40278:intron | 25.0% |
| AAATTTGTGATGTCCTTTAC+AGG | + | chr3.3:90986829-90986848 | MS.gene40278:intron | 30.0% | |
| AACCAAACTTTGATCTGTTT+AGG | - | chr3.3:90985234-90985253 | None:intergenic | 30.0% | |
| AACCTAAACAGATCAAAGTT+TGG | + | chr3.3:90985229-90985248 | MS.gene40278:CDS | 30.0% | |
| AATCGATACTTAAATCCCTT+TGG | + | chr3.3:90989812-90989831 | MS.gene40278:CDS | 30.0% | |
| AATGCAATTGTGAAGGAAAA+TGG | - | chr3.3:90987821-90987840 | None:intergenic | 30.0% | |
| AGATTTGAAGGTAAACATGT+TGG | + | chr3.3:90987638-90987657 | MS.gene40278:intron | 30.0% | |
| AGCTACAAAATAATAGCTTG+TGG | - | chr3.3:90988289-90988308 | None:intergenic | 30.0% | |
| ATATATAGTACTCAAGGGAA+AGG | - | chr3.3:90988177-90988196 | None:intergenic | 30.0% | |
| CAGAACTACTTAAATGTGAA+GGG | + | chr3.3:90989785-90989804 | MS.gene40278:CDS | 30.0% | |
| CATGTTAGATTTCGTTAATG+TGG | - | chr3.3:90987051-90987070 | None:intergenic | 30.0% | |
| CTCTCAATTGCAATTATAGA+AGG | - | chr3.3:90988929-90988948 | None:intergenic | 30.0% | |
| CTGATTATAGAAGATGCTTT+CGG | + | chr3.3:90989027-90989046 | MS.gene40278:intron | 30.0% | |
| GAATCCCCTGTAAAATAAAA+AGG | - | chr3.3:90987886-90987905 | None:intergenic | 30.0% | |
| GACTTAGTTGACGAAAAAAT+TGG | - | chr3.3:90986415-90986434 | None:intergenic | 30.0% | |
| TACATGTTTATGCACCTATA+TGG | + | chr3.3:90987188-90987207 | MS.gene40278:intron | 30.0% | |
| TACTAAGTTATTGGTGTGTT+TGG | + | chr3.3:90988229-90988248 | MS.gene40278:intron | 30.0% | |
| TAGTAACAATGCAATTGTGA+AGG | - | chr3.3:90987828-90987847 | None:intergenic | 30.0% | |
| TCTGTTTCATGTTCATCAAT+TGG | + | chr3.3:90990483-90990502 | MS.gene40278:CDS | 30.0% | |
| TGATGATCTTAATCATGTTC+GGG | + | chr3.3:90989725-90989744 | MS.gene40278:intron | 30.0% | |
| TGCGATATTATCTTGAAGAT+GGG | - | chr3.3:90989486-90989505 | None:intergenic | 30.0% | |
| TGTTAAACATGCAACCATAT+AGG | - | chr3.3:90987205-90987224 | None:intergenic | 30.0% | |
| TTCACTCAATGCATATTACT+GGG | - | chr3.3:90986805-90986824 | None:intergenic | 30.0% | |
| TTCTTAGTACTCACTACTTA+TGG | + | chr3.3:90988111-90988130 | MS.gene40278:intron | 30.0% | |
| TTGACATCAGTAAAATCACT+TGG | + | chr3.3:90988317-90988336 | MS.gene40278:intron | 30.0% | |
| TTGAGAGAAAACACTTCTAT+TGG | + | chr3.3:90988942-90988961 | MS.gene40278:intron | 30.0% | |
| TTTAGCAGAGTTTCTATCAA+AGG | + | chr3.3:90986075-90986094 | MS.gene40278:CDS | 30.0% | |
| TTTAGGCTTTACGTCATTTA+AGG | + | chr3.3:90987699-90987718 | MS.gene40278:intron | 30.0% | |
| ! | AAGAGTATGTTGATGTTAAC+GGG | + | chr3.3:90990213-90990232 | MS.gene40278:intron | 30.0% |
| ! | ACAAAATAATAGCTTGTGGT+TGG | - | chr3.3:90988285-90988304 | None:intergenic | 30.0% |
| ! | ACATAAGGAAAAGGGTATAA+AGG | - | chr3.3:90986480-90986499 | None:intergenic | 30.0% |
| ! | ATCCTTATACTCAAGACTTT+TGG | + | chr3.3:90986536-90986555 | MS.gene40278:intron | 30.0% |
| ! | GTTTTCTGTAATACAGTTCA+TGG | + | chr3.3:90988742-90988761 | MS.gene40278:intron | 30.0% |
| ! | TCAAACATGTTTTTCGTCTT+TGG | + | chr3.3:90988697-90988716 | MS.gene40278:intron | 30.0% |
| ! | TGTTGATCATATGCTTTTAG+AGG | + | chr3.3:90987422-90987441 | MS.gene40278:CDS | 30.0% |
| ! | TTACATTTTGTGTATGTTGG+CGG | - | chr3.3:90985514-90985533 | None:intergenic | 30.0% |
| ! | TTGATTCGCAAACGTAAAAA+CGG | - | chr3.3:90990048-90990067 | None:intergenic | 30.0% |
| !! | AATATCAGAGTTTGAGTTGA+AGG | - | chr3.3:90987237-90987256 | None:intergenic | 30.0% |
| !! | TAAATTTTGCCATTTGAGTC+TGG | + | chr3.3:90985651-90985670 | MS.gene40278:intron | 30.0% |
| !!! | TTTTTTCGCAGATTCTATCT+AGG | + | chr3.3:90989760-90989779 | MS.gene40278:intron | 30.0% |
| AAAATGTATGCGACGAAGTT+TGG | + | chr3.3:90990269-90990288 | MS.gene40278:intron | 35.0% | |
| AATAGTTAGCTATGCACATG+AGG | - | chr3.3:90989054-90989073 | None:intergenic | 35.0% | |
| AATGAACAAACTGCTTATGG+AGG | + | chr3.3:90985433-90985452 | MS.gene40278:CDS | 35.0% | |
| AATGTTATGTCCACAGGAAA+TGG | + | chr3.3:90986914-90986933 | MS.gene40278:CDS | 35.0% | |
| ACAGCTCTCTCATAAGTTAT+TGG | - | chr3.3:90990422-90990441 | None:intergenic | 35.0% | |
| ACCAAATGACTTCTGATACT+CGG | + | chr3.3:90988259-90988278 | MS.gene40278:intron | 35.0% | |
| ACTGTATTACAGAAAACCAC+TGG | - | chr3.3:90988739-90988758 | None:intergenic | 35.0% | |
| AGAAATTGCAACGATTCCAA+TGG | - | chr3.3:90986674-90986693 | None:intergenic | 35.0% | |
| AGCAATGAACAAACTGCTTA+TGG | + | chr3.3:90985430-90985449 | MS.gene40278:CDS | 35.0% | |
| AGGTGATGAATTCACAAGAA+GGG | - | chr3.3:90987979-90987998 | None:intergenic | 35.0% | |
| CATTGAATTGCTTTACATGC+AGG | + | chr3.3:90986943-90986962 | MS.gene40278:CDS | 35.0% | |
| CTGCATGTAAAGCAATTCAA+TGG | - | chr3.3:90986945-90986964 | None:intergenic | 35.0% | |
| CTGCGATATTATCTTGAAGA+TGG | - | chr3.3:90989487-90989506 | None:intergenic | 35.0% | |
| GAAATTCTTCCACTTCTTGT+TGG | + | chr3.3:90989276-90989295 | MS.gene40278:intron | 35.0% | |
| GAATGATACCTGTAACAACA+TGG | - | chr3.3:90988084-90988103 | None:intergenic | 35.0% | |
| GCAGAACTACTTAAATGTGA+AGG | + | chr3.3:90989784-90989803 | MS.gene40278:CDS | 35.0% | |
| GCAGCAGTAAAAAAAGAAGT+TGG | - | chr3.3:90986256-90986275 | None:intergenic | 35.0% | |
| GGTATTTGTTTATCCAGCAT+GGG | + | chr3.3:90990392-90990411 | MS.gene40278:CDS | 35.0% | |
| GGTTCAATATGAGAGAGAAT+AGG | - | chr3.3:90985213-90985232 | None:intergenic | 35.0% | |
| GTATTTGTTTATCCAGCATG+GGG | + | chr3.3:90990393-90990412 | MS.gene40278:CDS | 35.0% | |
| GTTATCAAGCTTGAGAACAT+GGG | + | chr3.3:90988767-90988786 | MS.gene40278:CDS | 35.0% | |
| GTTCACTCAATGCATATTAC+TGG | - | chr3.3:90986806-90986825 | None:intergenic | 35.0% | |
| TACTATCCAACGACATACAT+TGG | - | chr3.3:90985998-90986017 | None:intergenic | 35.0% | |
| TAGGTGATGAATTCACAAGA+AGG | - | chr3.3:90987980-90987999 | None:intergenic | 35.0% | |
| TCAAGATAATATCGCAGCTA+TGG | + | chr3.3:90989490-90989509 | MS.gene40278:CDS | 35.0% | |
| TCACTTAACAACACACAGAA+TGG | + | chr3.3:90987300-90987319 | MS.gene40278:CDS | 35.0% | |
| TCAGAGAAAGATGCATCAAT+TGG | - | chr3.3:90989156-90989175 | None:intergenic | 35.0% | |
| TGATTCGCAAACGTAAAAAC+GGG | - | chr3.3:90990047-90990066 | None:intergenic | 35.0% | |
| TGCTGTTATGCATAGTGAAA+TGG | - | chr3.3:90989688-90989707 | None:intergenic | 35.0% | |
| TGGTATTTGTTTATCCAGCA+TGG | + | chr3.3:90990391-90990410 | MS.gene40278:CDS | 35.0% | |
| TGGTCTATGTTAGATAGTGA+TGG | + | chr3.3:90987939-90987958 | MS.gene40278:CDS | 35.0% | |
| TGTAAGAGGAAAATATCACC+AGG | - | chr3.3:90988818-90988837 | None:intergenic | 35.0% | |
| TGTATGTCGTTGGATAGTAA+TGG | + | chr3.3:90985999-90986018 | MS.gene40278:intron | 35.0% | |
| TTCTGTAATACAGTTCATGG+AGG | + | chr3.3:90988745-90988764 | MS.gene40278:intron | 35.0% | |
| TTGCTGAAATCCTCAAAGAT+AGG | + | chr3.3:90986852-90986871 | MS.gene40278:CDS | 35.0% | |
| ! | ACTTCAGCTCTAACAAAATG+CGG | - | chr3.3:90987345-90987364 | None:intergenic | 35.0% |
| ! | AGTCACAACGTTTGATTTAG+CGG | - | chr3.3:90989946-90989965 | None:intergenic | 35.0% |
| ! | ATGTTGATGTTAACGGGTAT+TGG | + | chr3.3:90990219-90990238 | MS.gene40278:intron | 35.0% |
| ! | GTTCTAAATGTTATGTCCAC+AGG | + | chr3.3:90986908-90986927 | MS.gene40278:CDS | 35.0% |
| ! | TGTTGATGTTAACGGGTATT+GGG | + | chr3.3:90990220-90990239 | MS.gene40278:intron | 35.0% |
| !! | AAGATGATGGGACTAAATCT+TGG | + | chr3.3:90988002-90988021 | MS.gene40278:CDS | 35.0% |
| !! | GAGTTTGAGTTGAAGGATAT+AGG | - | chr3.3:90987230-90987249 | None:intergenic | 35.0% |
| !! | TGATTCTTTGAAATCAGCCT+TGG | + | chr3.3:90987515-90987534 | MS.gene40278:intron | 35.0% |
| !!! | AAGTAGGTTTTGGACATTCA+TGG | - | chr3.3:90985158-90985177 | None:intergenic | 35.0% |
| !!! | CATCAATTGGTCTTTTGTCT+AGG | + | chr3.3:90990496-90990515 | MS.gene40278:CDS | 35.0% |
| AAAACGTGTTCTCGTACACA+AGG | - | chr3.3:90985490-90985509 | None:intergenic | 40.0% | |
| AAAGCCTAAACGACAATTGC+AGG | - | chr3.3:90987689-90987708 | None:intergenic | 40.0% | |
| AAGCCTAAACGACAATTGCA+GGG | - | chr3.3:90987688-90987707 | None:intergenic | 40.0% | |
| AATCTAAGAAGAATAGCCGG+AGG | - | chr3.3:90988439-90988458 | None:intergenic | 40.0% | |
| ACGAAAACCAGAAGGCAAAA+TGG | - | chr3.3:90989187-90989206 | None:intergenic | 40.0% | |
| ACTATACCTGCTGCATTATC+TGG | - | chr3.3:90990175-90990194 | None:intergenic | 40.0% | |
| ACTGATCCAATGTATGTCGT+TGG | + | chr3.3:90985989-90986008 | MS.gene40278:intron | 40.0% | |
| AGATGGTAGCAAGATAGCAA+TGG | + | chr3.3:90985074-90985093 | MS.gene40278:CDS | 40.0% | |
| AGCAAGATAGCAATGGACAA+TGG | + | chr3.3:90985081-90985100 | MS.gene40278:CDS | 40.0% | |
| AGCATGGATGACTCATAAAG+TGG | - | chr3.3:90987562-90987581 | None:intergenic | 40.0% | |
| AGGAAGTTAATTACCCTTGC+AGG | - | chr3.3:90986748-90986767 | None:intergenic | 40.0% | |
| AGGATTTCAGCAACCTGTAA+AGG | - | chr3.3:90986845-90986864 | None:intergenic | 40.0% | |
| AGGGATGATATTACAATGCC+TGG | + | chr3.3:90988797-90988816 | MS.gene40278:CDS | 40.0% | |
| AGGGTAATTAACCTTCATCC+CGG | - | chr3.3:90986134-90986153 | None:intergenic | 40.0% | |
| ATCATCACTCCAACAAGAAG+TGG | - | chr3.3:90989288-90989307 | None:intergenic | 40.0% | |
| ATCTAAGAAGAATAGCCGGA+GGG | - | chr3.3:90988438-90988457 | None:intergenic | 40.0% | |
| CAAAGCTTCCATGTTGTTAC+AGG | + | chr3.3:90988073-90988092 | MS.gene40278:CDS | 40.0% | |
| CAGGGTTTCATGTGTATTCA+AGG | + | chr3.3:90990368-90990387 | MS.gene40278:intron | 40.0% | |
| CATACCTCTTGAATCTAGCA+CGG | + | chr3.3:90989209-90989228 | MS.gene40278:CDS | 40.0% | |
| CGAAAACCAGAAGGCAAAAT+GGG | - | chr3.3:90989186-90989205 | None:intergenic | 40.0% | |
| CTATACCTGCTGCATTATCT+GGG | - | chr3.3:90990174-90990193 | None:intergenic | 40.0% | |
| CTGTAACAACATGGAAGCTT+TGG | - | chr3.3:90988075-90988094 | None:intergenic | 40.0% | |
| CTTGTAGACTAACAAACCAG+TGG | + | chr3.3:90988720-90988739 | MS.gene40278:intron | 40.0% | |
| CTTTGTCTTATGTACGATGC+AGG | + | chr3.3:90989316-90989335 | MS.gene40278:intron | 40.0% | |
| GAGCTGAGATCATCAAAGTT+AGG | + | chr3.3:90985596-90985615 | MS.gene40278:intron | 40.0% | |
| GAGTATCAGAAGTCATTTGG+TGG | - | chr3.3:90988260-90988279 | None:intergenic | 40.0% | |
| GAGTTTCTATCAAAGGCTAC+TGG | + | chr3.3:90986082-90986101 | MS.gene40278:CDS | 40.0% | |
| GCATGGATGACTCATAAAGT+GGG | - | chr3.3:90987561-90987580 | None:intergenic | 40.0% | |
| GGAATCGTTGCAATTTCTCA+TGG | + | chr3.3:90986676-90986695 | MS.gene40278:CDS | 40.0% | |
| GGCCAAAAGTCTTGAGTATA+AGG | - | chr3.3:90986541-90986560 | None:intergenic | 40.0% | |
| GGTATGATACGAAAACCAGA+AGG | - | chr3.3:90989195-90989214 | None:intergenic | 40.0% | |
| GGTTATCAAGCTTGAGAACA+TGG | + | chr3.3:90988766-90988785 | MS.gene40278:CDS | 40.0% | |
| GGTTTCATGTGTATTCAAGG+TGG | + | chr3.3:90990371-90990390 | MS.gene40278:CDS | 40.0% | |
| TATACCTGCTGCATTATCTG+GGG | - | chr3.3:90990173-90990192 | None:intergenic | 40.0% | |
| TATCTGATTAGACCCTGTGA+AGG | + | chr3.3:90987378-90987397 | MS.gene40278:CDS | 40.0% | |
| TCATCACCTAGCAAGATGAT+GGG | + | chr3.3:90987990-90988009 | MS.gene40278:CDS | 40.0% | |
| TGATCTTAATCATGTTCGGG+CGG | + | chr3.3:90989728-90989747 | MS.gene40278:intron | 40.0% | |
| TTCATCACCTAGCAAGATGA+TGG | + | chr3.3:90987989-90988008 | MS.gene40278:CDS | 40.0% | |
| TTTACGTTTGCGAATCAAGC+TGG | + | chr3.3:90990050-90990069 | MS.gene40278:CDS | 40.0% | |
| TTTAGTCCCATCATCTTGCT+AGG | - | chr3.3:90987999-90988018 | None:intergenic | 40.0% | |
| ! | AAGTTTGGTTCCAGAACAGA+AGG | + | chr3.3:90985244-90985263 | MS.gene40278:CDS | 40.0% |
| ! | AATGCTTTTCACTTACCACC+TGG | + | chr3.3:90989593-90989612 | MS.gene40278:CDS | 40.0% |
| ! | ACTTTGATGATCTCAGCTCA+AGG | - | chr3.3:90985595-90985614 | None:intergenic | 40.0% |
| ! | ATACTCAAGACTTTTGGCCA+AGG | + | chr3.3:90986542-90986561 | MS.gene40278:intron | 40.0% |
| ! | ATTTGATGACTTACCCAGCA+GGG | - | chr3.3:90985885-90985904 | None:intergenic | 40.0% |
| ! | GGTTCTGTGTTGCTCTTTAA+AGG | + | chr3.3:90989849-90989868 | MS.gene40278:CDS | 40.0% |
| ! | GTGATGAATGTTTTGTAGCC+TGG | + | chr3.3:90986640-90986659 | MS.gene40278:intron | 40.0% |
| ! | TAACCCTGCAATTGTCGTTT+AGG | + | chr3.3:90987682-90987701 | MS.gene40278:intron | 40.0% |
| ! | TATCAGAAGTCATTTGGTGG+TGG | - | chr3.3:90988257-90988276 | None:intergenic | 40.0% |
| ! | TATTTGATGACTTACCCAGC+AGG | - | chr3.3:90985886-90985905 | None:intergenic | 40.0% |
| ! | TGAGAACATGGGCTACTATA+GGG | + | chr3.3:90988778-90988797 | MS.gene40278:CDS | 40.0% |
| ! | TGGACAATGGAAAGTACGTA+AGG | + | chr3.3:90985094-90985113 | MS.gene40278:CDS | 40.0% |
| ! | TTGAGAACATGGGCTACTAT+AGG | + | chr3.3:90988777-90988796 | MS.gene40278:CDS | 40.0% |
| !! | GTGTTGGTTTATGTAGTCCT+TGG | - | chr3.3:90986562-90986581 | None:intergenic | 40.0% |
| !! | TACACATCACTTTTGGAGGA+TGG | + | chr3.3:90987139-90987158 | MS.gene40278:CDS | 40.0% |
| !! | TGTTAACGGGTATTGGGAAA+TGG | + | chr3.3:90990226-90990245 | MS.gene40278:intron | 40.0% |
| AAAACTTCAGGCACACTCCA+AGG | - | chr3.3:90987535-90987554 | None:intergenic | 45.0% | |
| AACCACTGGAAACAAAGCAG+GGG | + | chr3.3:90989391-90989410 | MS.gene40278:CDS | 45.0% | |
| AATGGTTCCTCCATTTCCTG+TGG | - | chr3.3:90986927-90986946 | None:intergenic | 45.0% | |
| ACCATGAGAGCCTATCTTTG+AGG | - | chr3.3:90986865-90986884 | None:intergenic | 45.0% | |
| ATACCTGCTGCATTATCTGG+GGG | - | chr3.3:90990172-90990191 | None:intergenic | 45.0% | |
| CAAAACCTACTTCTCTTCGC+AGG | + | chr3.3:90985166-90985185 | MS.gene40278:CDS | 45.0% | |
| CTGAAGCACAAACGCTTACT+CGG | + | chr3.3:90989621-90989640 | MS.gene40278:CDS | 45.0% | |
| CTTATGAGAGAGCTGTAGCA+TGG | + | chr3.3:90990426-90990445 | MS.gene40278:CDS | 45.0% | |
| GAACCACTGGAAACAAAGCA+GGG | + | chr3.3:90989390-90989409 | MS.gene40278:CDS | 45.0% | |
| GAAGGTTACAAGCTGTGAAC+AGG | + | chr3.3:90985399-90985418 | MS.gene40278:CDS | 45.0% | |
| GATGTCTTGAAGTGCAACCA+GGG | - | chr3.3:90990096-90990115 | None:intergenic | 45.0% | |
| GATTCAACGAAGCTGTCAAC+GGG | + | chr3.3:90987901-90987920 | MS.gene40278:CDS | 45.0% | |
| GATTTAGCGGTGAGGAGTTT+CGG | - | chr3.3:90989933-90989952 | None:intergenic | 45.0% | |
| GCAACGATTCCAATGGAATC+CGG | - | chr3.3:90986667-90986686 | None:intergenic | 45.0% | |
| GCAACTTGACCAGACTCAAA+TGG | - | chr3.3:90985663-90985682 | None:intergenic | 45.0% | |
| GCCGAGTATCAGAAGTCATT+TGG | - | chr3.3:90988263-90988282 | None:intergenic | 45.0% | |
| GCTTGCTCAGAGAACAACTA+TGG | + | chr3.3:90987582-90987601 | MS.gene40278:CDS | 45.0% | |
| GGATTCAACGAAGCTGTCAA+CGG | + | chr3.3:90987900-90987919 | MS.gene40278:CDS | 45.0% | |
| GGGTAATTAACCTTCATCCC+GGG | - | chr3.3:90986133-90986152 | None:intergenic | 45.0% | |
| GGGTGACAATTCAGGTCATT+CGG | + | chr3.3:90989412-90989431 | MS.gene40278:CDS | 45.0% | |
| GGTCTAATCAGATAACCGCT+AGG | - | chr3.3:90987372-90987391 | None:intergenic | 45.0% | |
| GGTGACAATTCAGGTCATTC+GGG | + | chr3.3:90989413-90989432 | MS.gene40278:CDS | 45.0% | |
| GGTGGATCTGTAACAGCTAT+AGG | + | chr3.3:90989642-90989661 | MS.gene40278:CDS | 45.0% | |
| GTATCGTGATTGTCGAACTG+TGG | + | chr3.3:90986883-90986902 | MS.gene40278:CDS | 45.0% | |
| GTGAGTTCAGGATGCAAAGA+TGG | + | chr3.3:90985057-90985076 | MS.gene40278:CDS | 45.0% | |
| GTTATGTCCACAGGAAATGG+AGG | + | chr3.3:90986917-90986936 | MS.gene40278:CDS | 45.0% | |
| TAAAGTGGGCGCAAAACTTC+AGG | - | chr3.3:90987547-90987566 | None:intergenic | 45.0% | |
| TCACACAATTGAGCACGAAG+AGG | + | chr3.3:90988594-90988613 | MS.gene40278:CDS | 45.0% | |
| TCCTCAAAGATAGGCTCTCA+TGG | + | chr3.3:90986861-90986880 | MS.gene40278:CDS | 45.0% | |
| TCTGAGAACCAAAACGCGAA+GGG | - | chr3.3:90989574-90989593 | None:intergenic | 45.0% | |
| TGATGTCTTGAAGTGCAACC+AGG | - | chr3.3:90990097-90990116 | None:intergenic | 45.0% | |
| TGATTAGACCCTGTGAAGGA+GGG | + | chr3.3:90987382-90987401 | MS.gene40278:CDS | 45.0% | |
| TGCTAAAGTCTCCTCTGCAA+TGG | - | chr3.3:90986062-90986081 | None:intergenic | 45.0% | |
| TGCTCAATTGTGTGAGCTAG+TGG | - | chr3.3:90988589-90988608 | None:intergenic | 45.0% | |
| TGTGAGTCAGTGGTAACAAG+CGG | + | chr3.3:90985832-90985851 | MS.gene40278:CDS | 45.0% | |
| TTTGGCACATAGCACAGAAC+TGG | - | chr3.3:90988057-90988076 | None:intergenic | 45.0% | |
| TTTGTTTATCCAGCATGGGG+AGG | + | chr3.3:90990396-90990415 | MS.gene40278:CDS | 45.0% | |
| ! | CAACGTTTGATTTAGCGGTG+AGG | - | chr3.3:90989941-90989960 | None:intergenic | 45.0% |
| ! | CAGACTTTTGTCCATTGCAG+AGG | + | chr3.3:90986048-90986067 | MS.gene40278:intron | 45.0% |
| ! | CATCTTCCTCAGCTTTGTAG+TGG | + | chr3.3:90989084-90989103 | MS.gene40278:intron | 45.0% |
| ! | CTGCGAAGAGAAGTAGGTTT+TGG | - | chr3.3:90985168-90985187 | None:intergenic | 45.0% |
| ! | GAATGTTTTGTAGCCTGGTC+CGG | + | chr3.3:90986645-90986664 | MS.gene40278:intron | 45.0% |
| ! | GATGGGCTTCAAATGCAAAC+TGG | - | chr3.3:90989469-90989488 | None:intergenic | 45.0% |
| ! | GCTACATGGACCAGCTTTAA+TGG | - | chr3.3:90988521-90988540 | None:intergenic | 45.0% |
| ! | GTCAACGGGTTTACAGATGA+TGG | + | chr3.3:90987915-90987934 | MS.gene40278:CDS | 45.0% |
| ! | TTCTGAGAACCAAAACGCGA+AGG | - | chr3.3:90989575-90989594 | None:intergenic | 45.0% |
| !! | ACGGGTTTACAGATGATGGA+TGG | + | chr3.3:90987919-90987938 | MS.gene40278:CDS | 45.0% |
| !!! | TTTAAATTTAAATATGATTT+TGG | + | chr3.3:90990012-90990031 | MS.gene40278:intron | 5.0% |
| AAAGCAGGGGGTGACAATTC+AGG | + | chr3.3:90989404-90989423 | MS.gene40278:CDS | 50.0% | |
| AAGCACAAACGCTTACTCGG+TGG | + | chr3.3:90989624-90989643 | MS.gene40278:CDS | 50.0% | |
| AAGGTACACACCAGAGCAAG+TGG | + | chr3.3:90985113-90985132 | MS.gene40278:CDS | 50.0% | |
| ACCACTGGAAACAAAGCAGG+GGG | + | chr3.3:90989392-90989411 | MS.gene40278:CDS | 50.0% | |
| AGCAGAGGAAAGAAGCTGGA+AGG | + | chr3.3:90985381-90985400 | MS.gene40278:CDS | 50.0% | |
| ATTAGACCCTGTGAAGGAGG+GGG | + | chr3.3:90987384-90987403 | MS.gene40278:CDS | 50.0% | |
| ATTCCAATGGAATCCGGACC+AGG | - | chr3.3:90986661-90986680 | None:intergenic | 50.0% | |
| ATTCCCCCAGATAATGCAGC+AGG | + | chr3.3:90990166-90990185 | MS.gene40278:CDS | 50.0% | |
| CAGAAGCAAGATCGAGTGTG+CGG | - | chr3.3:90989358-90989377 | None:intergenic | 50.0% | |
| CATTTGGACCCACTCAACAG+CGG | - | chr3.3:90986110-90986129 | None:intergenic | 50.0% | |
| CCTTTGGCATCACTCAGATG+CGG | + | chr3.3:90989828-90989847 | MS.gene40278:CDS | 50.0% | |
| CGAGTAAGCGTTTGTGCTTC+AGG | - | chr3.3:90989623-90989642 | None:intergenic | 50.0% | |
| CGATCTTGCTTCTGCACTTG+AGG | + | chr3.3:90989364-90989383 | MS.gene40278:CDS | 50.0% | |
| CGCATCTGAGTGATGCCAAA+GGG | - | chr3.3:90989830-90989849 | None:intergenic | 50.0% | |
| CTGAGAACCAAAACGCGAAG+GGG | - | chr3.3:90989573-90989592 | None:intergenic | 50.0% | |
| CTGATTAGACCCTGTGAAGG+AGG | + | chr3.3:90987381-90987400 | MS.gene40278:CDS | 50.0% | |
| CTTGCCGTGCTAGATTCAAG+AGG | - | chr3.3:90989216-90989235 | None:intergenic | 50.0% | |
| CTTGCTTCTGCACTTGAGGT+TGG | + | chr3.3:90989368-90989387 | MS.gene40278:CDS | 50.0% | |
| GAGAAGCAGAGGAAAGAAGC+TGG | + | chr3.3:90985377-90985396 | MS.gene40278:CDS | 50.0% | |
| GATTAGACCCTGTGAAGGAG+GGG | + | chr3.3:90987383-90987402 | MS.gene40278:CDS | 50.0% | |
| GCAATTTCTCATGGTTCCCC+TGG | + | chr3.3:90986685-90986704 | MS.gene40278:CDS | 50.0% | |
| GCGGGAACACAGATCAGAAT+GGG | + | chr3.3:90988462-90988481 | MS.gene40278:CDS | 50.0% | |
| GCTCTAACAAAATGCGGCAC+TGG | - | chr3.3:90987339-90987358 | None:intergenic | 50.0% | |
| GGAACCACTGGAAACAAAGC+AGG | + | chr3.3:90989389-90989408 | MS.gene40278:CDS | 50.0% | |
| GTCCTTGTAGAATGTCCCTC+CGG | + | chr3.3:90988420-90988439 | MS.gene40278:intron | 50.0% | |
| GTTGTATGCGCCAACAACTC+TGG | + | chr3.3:90987087-90987106 | MS.gene40278:intron | 50.0% | |
| GTTTCTCAGCCAAGTGTGAC+AGG | + | chr3.3:90987737-90987756 | MS.gene40278:CDS | 50.0% | |
| GTTTGTGCTTCAGGAGTTCC+AGG | - | chr3.3:90989614-90989633 | None:intergenic | 50.0% | |
| TAACCTTCATCCCGGGCATT+TGG | - | chr3.3:90986126-90986145 | None:intergenic | 50.0% | |
| TACTGGAACCGCTGTTGAGT+GGG | + | chr3.3:90986099-90986118 | MS.gene40278:CDS | 50.0% | |
| TCAAGTGCTTCCACTTGCTC+TGG | - | chr3.3:90985126-90985145 | None:intergenic | 50.0% | |
| TCAGCAGCTGCCATTAAAGC+TGG | + | chr3.3:90988508-90988527 | MS.gene40278:CDS | 50.0% | |
| TCAGCCAAGTGTGACAGGAT+GGG | + | chr3.3:90987742-90987761 | MS.gene40278:CDS | 50.0% | |
| TCCACTCCACTACAAAGCTG+AGG | - | chr3.3:90989093-90989112 | None:intergenic | 50.0% | |
| TGACATGCTTGAAACCACCC+TGG | + | chr3.3:90990076-90990095 | MS.gene40278:CDS | 50.0% | |
| TGCGGGAACACAGATCAGAA+TGG | + | chr3.3:90988461-90988480 | MS.gene40278:CDS | 50.0% | |
| TGTTCTCTGAGCAAGCAGCA+TGG | - | chr3.3:90987578-90987597 | None:intergenic | 50.0% | |
| TGTTGCCTGCGAAGAGAAGT+AGG | - | chr3.3:90985174-90985193 | None:intergenic | 50.0% | |
| TTTGGAGGATGGCAGTCTTG+TGG | + | chr3.3:90987150-90987169 | MS.gene40278:CDS | 50.0% | |
| ! | ACAGAACTGGTGGTGACAGA+TGG | - | chr3.3:90988044-90988063 | None:intergenic | 50.0% |
| ! | CTAACAAAATGCGGCACTGG+AGG | - | chr3.3:90987336-90987355 | None:intergenic | 50.0% |
| ! | GATGCACCCATTTTGCCTTC+TGG | + | chr3.3:90989177-90989196 | MS.gene40278:CDS | 50.0% |
| ! | GCTGCGCTACACATCACTTT+TGG | + | chr3.3:90987132-90987151 | MS.gene40278:CDS | 50.0% |
| ! | TCCTCAGCTTTGTAGTGGAG+TGG | + | chr3.3:90989089-90989108 | MS.gene40278:intron | 50.0% |
| !! | AGAGCTGAAGTGTTGCCTAG+CGG | + | chr3.3:90987354-90987373 | MS.gene40278:CDS | 50.0% |
| !! | GCGCTACACATCACTTTTGG+AGG | + | chr3.3:90987135-90987154 | MS.gene40278:CDS | 50.0% |
| AACTCGTGTCCGTAGTGGCA+AGG | - | chr3.3:90985813-90985832 | None:intergenic | 55.0% | |
| ACAGACGACCCTTGCCACTA+CGG | + | chr3.3:90985801-90985820 | MS.gene40278:intron | 55.0% | |
| ACCACCAAAAGCTCCTGCTC+GGG | - | chr3.3:90988554-90988573 | None:intergenic | 55.0% | |
| ACTCGTGTCCGTAGTGGCAA+GGG | - | chr3.3:90985812-90985831 | None:intergenic | 55.0% | |
| AGCCGGAGGGACATTCTACA+AGG | - | chr3.3:90988425-90988444 | None:intergenic | 55.0% | |
| ATGGATCCCCCTCCTTCACA+GGG | - | chr3.3:90987393-90987412 | None:intergenic | 55.0% | |
| CAAGTGTGACAGGATGGGGA+AGG | + | chr3.3:90987747-90987766 | MS.gene40278:CDS | 55.0% | |
| CAGCCAAGTGTGACAGGATG+GGG | + | chr3.3:90987743-90987762 | MS.gene40278:CDS | 55.0% | |
| CCGCATCTGAGTGATGCCAA+AGG | - | chr3.3:90989831-90989850 | None:intergenic | 55.0% | |
| CGTGGGTCTTGAACCTGCAA+GGG | + | chr3.3:90986732-90986751 | MS.gene40278:CDS | 55.0% | |
| CTACTGGAACCGCTGTTGAG+TGG | + | chr3.3:90986098-90986117 | MS.gene40278:CDS | 55.0% | |
| CTCACAACTCGTGTCCGTAG+TGG | - | chr3.3:90985818-90985837 | None:intergenic | 55.0% | |
| CTCAGCCAAGTGTGACAGGA+TGG | + | chr3.3:90987741-90987760 | MS.gene40278:CDS | 55.0% | |
| CTGGGGGAATTCAGAGCACA+GGG | - | chr3.3:90990156-90990175 | None:intergenic | 55.0% | |
| CTTCCCCATCCTGTCACACT+TGG | - | chr3.3:90987749-90987768 | None:intergenic | 55.0% | |
| GACCACCAAAAGCTCCTGCT+CGG | - | chr3.3:90988555-90988574 | None:intergenic | 55.0% | |
| GCAAGATCGAGTGTGCGGTT+AGG | - | chr3.3:90989353-90989372 | None:intergenic | 55.0% | |
| GCACTTGAGGTTGGAACCAC+TGG | + | chr3.3:90989377-90989396 | MS.gene40278:CDS | 55.0% | |
| GGACACGAGTTGTGAGTCAG+TGG | + | chr3.3:90985822-90985841 | MS.gene40278:CDS | 55.0% | |
| GGCACATAGCACAGAACTGG+TGG | - | chr3.3:90988054-90988073 | None:intergenic | 55.0% | |
| GTCTTGAAGTGCAACCAGGG+TGG | - | chr3.3:90990093-90990112 | None:intergenic | 55.0% | |
| GTTGAGTGGGTCCAAATGCC+CGG | + | chr3.3:90986112-90986131 | MS.gene40278:CDS | 55.0% | |
| TAGCCTGGTCCGGATTCCAT+TGG | + | chr3.3:90986655-90986674 | MS.gene40278:intron | 55.0% | |
| TATGGATCCCCCTCCTTCAC+AGG | - | chr3.3:90987394-90987413 | None:intergenic | 55.0% | |
| TCGTGGGTCTTGAACCTGCA+AGG | + | chr3.3:90986731-90986750 | MS.gene40278:CDS | 55.0% | |
| TCTGGGGGAATTCAGAGCAC+AGG | - | chr3.3:90990157-90990176 | None:intergenic | 55.0% | |
| TGTGCTTCAGGAGTTCCAGG+TGG | - | chr3.3:90989611-90989630 | None:intergenic | 55.0% | |
| TTCTCATGGTTCCCCTGGAG+TGG | + | chr3.3:90986690-90986709 | MS.gene40278:CDS | 55.0% | |
| TTGAGTGGGTCCAAATGCCC+GGG | + | chr3.3:90986113-90986132 | MS.gene40278:CDS | 55.0% | |
| TTGCAGGTTCAAGACCCACG+AGG | - | chr3.3:90986732-90986751 | None:intergenic | 55.0% | |
| ! | AGTTATTGGCCTCCCCATGC+TGG | - | chr3.3:90990408-90990427 | None:intergenic | 55.0% |
| ! | CTGGTCCATGTAGCTTGCCA+GGG | + | chr3.3:90988527-90988546 | MS.gene40278:CDS | 55.0% |
| ! | GCACTTTCCCCTTCGCGTTT+TGG | + | chr3.3:90989563-90989582 | MS.gene40278:CDS | 55.0% |
| ! | TGGTCCATGTAGCTTGCCAG+GGG | + | chr3.3:90988528-90988547 | MS.gene40278:CDS | 55.0% |
| !! | ACCCCCTGCTTTGTTTCCAG+TGG | - | chr3.3:90989396-90989415 | None:intergenic | 55.0% |
| !! | AGCAGGAGCTTTTGGTGGTC+AGG | + | chr3.3:90988555-90988574 | MS.gene40278:CDS | 55.0% |
| AGCAACCAGAAGTCGCGACC+TGG | - | chr3.3:90987115-90987134 | None:intergenic | 60.0% | |
| CAAGGGATGCAAGCCCTGCT+GGG | + | chr3.3:90985869-90985888 | MS.gene40278:CDS | 60.0% | |
| CGGTCAGCAGCATCCACCAA+GGG | + | chr3.3:90985852-90985871 | MS.gene40278:CDS | 60.0% | |
| CTAAGCGCACGTAGAGCTGC+AGG | - | chr3.3:90987776-90987795 | None:intergenic | 60.0% | |
| GCAGGTGCAGAGAGAAGCAG+AGG | + | chr3.3:90985366-90985385 | MS.gene40278:intron | 60.0% | |
| GGAGTGGACGAGCATGCAGT+TGG | + | chr3.3:90989105-90989124 | MS.gene40278:CDS | 60.0% | |
| GGTCCAAATGCCCGGGATGA+AGG | + | chr3.3:90986120-90986139 | MS.gene40278:CDS | 60.0% | |
| GTGTGACAGGATGGGGAAGG+CGG | + | chr3.3:90987750-90987769 | MS.gene40278:CDS | 60.0% | |
| ! | CGACCTGGTGCCAGAGTTGT+TGG | - | chr3.3:90987100-90987119 | None:intergenic | 60.0% |
| ! | GCTGGTCCATGTAGCTTGCC+AGG | + | chr3.3:90988526-90988545 | MS.gene40278:CDS | 60.0% |
| ! | TGCGGCACTGGAGGCATACT+AGG | - | chr3.3:90987327-90987346 | None:intergenic | 60.0% |
| AGGCACGTGCAGCCACTCCA+GGG | - | chr3.3:90986705-90986724 | None:intergenic | 65.0% | |
| CCAAGGGATGCAAGCCCTGC+TGG | + | chr3.3:90985868-90985887 | MS.gene40278:CDS | 65.0% | |
| CCAGCAGGGCTTGCATCCCT+TGG | - | chr3.3:90985871-90985890 | None:intergenic | 65.0% | |
| GCAGGGCTTGCATCCCTTGG+TGG | - | chr3.3:90985868-90985887 | None:intergenic | 65.0% | |
| GCGCCAACAACTCTGGCACC+AGG | + | chr3.3:90987094-90987113 | MS.gene40278:CDS | 65.0% | |
| GCGGTCAGCAGCATCCACCA+AGG | + | chr3.3:90985851-90985870 | MS.gene40278:CDS | 65.0% | |
| TGGCACCAGGTCGCGACTTC+TGG | + | chr3.3:90987107-90987126 | MS.gene40278:CDS | 65.0% | |
| TTCAAGACCCACGAGGCCGC+AGG | - | chr3.3:90986725-90986744 | None:intergenic | 65.0% | |
| ! | GCCCGAGCAGGAGCTTTTGG+TGG | + | chr3.3:90988550-90988569 | MS.gene40278:CDS | 65.0% |
| AAAGCTCCTGCTCGGGCCCC+TGG | - | chr3.3:90988547-90988566 | None:intergenic | 70.0% | |
| CAGGCACGTGCAGCCACTCC+AGG | - | chr3.3:90986706-90986725 | None:intergenic | 70.0% | |
| CGGGCCCCTGGCAAGCTACA+TGG | - | chr3.3:90988535-90988554 | None:intergenic | 70.0% | |
| GGAGTGGCTGCACGTGCCTG+CGG | + | chr3.3:90986706-90986725 | MS.gene40278:CDS | 70.0% | |
| GGCACGTGCAGCCACTCCAG+GGG | - | chr3.3:90986704-90986723 | None:intergenic | 70.0% | |
| ! | GGGGCCCGAGCAGGAGCTTT+TGG | + | chr3.3:90988547-90988566 | MS.gene40278:CDS | 70.0% |
| AGCTTGCCAGGGGCCCGAGC+AGG | + | chr3.3:90988538-90988557 | MS.gene40278:CDS | 75.0% | |
| GCACGTGCCTGCGGCCTCGT+GGG | + | chr3.3:90986715-90986734 | MS.gene40278:CDS | 75.0% | |
| TGCACGTGCCTGCGGCCTCG+TGG | + | chr3.3:90986714-90986733 | MS.gene40278:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 90985048 | 90990517 | 90985048 | ID=MS.gene40278 |
| chr3.3 | mRNA | 90985048 | 90990517 | 90985048 | ID=MS.gene40278.t1;Parent=MS.gene40278 |
| chr3.3 | exon | 90985048 | 90985265 | 90985048 | ID=MS.gene40278.t1.exon1;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90985048 | 90985265 | 90985048 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90985370 | 90985529 | 90985370 | ID=MS.gene40278.t1.exon2;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90985370 | 90985529 | 90985370 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90985805 | 90985890 | 90985805 | ID=MS.gene40278.t1.exon3;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90985805 | 90985890 | 90985805 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90986051 | 90986141 | 90986051 | ID=MS.gene40278.t1.exon4;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90986051 | 90986141 | 90986051 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90986658 | 90986753 | 90986658 | ID=MS.gene40278.t1.exon5;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90986658 | 90986753 | 90986658 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90986851 | 90986964 | 90986851 | ID=MS.gene40278.t1.exon6;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90986851 | 90986964 | 90986851 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90987088 | 90987171 | 90987088 | ID=MS.gene40278.t1.exon7;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90987088 | 90987171 | 90987088 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90987288 | 90987443 | 90987288 | ID=MS.gene40278.t1.exon8;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90987288 | 90987443 | 90987288 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90987532 | 90987606 | 90987532 | ID=MS.gene40278.t1.exon9;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90987532 | 90987606 | 90987532 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90987704 | 90987810 | 90987704 | ID=MS.gene40278.t1.exon10;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90987704 | 90987810 | 90987704 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90987899 | 90988094 | 90987899 | ID=MS.gene40278.t1.exon11;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90987899 | 90988094 | 90987899 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90988430 | 90988615 | 90988430 | ID=MS.gene40278.t1.exon12;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90988430 | 90988615 | 90988430 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90988758 | 90988838 | 90988758 | ID=MS.gene40278.t1.exon13;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90988758 | 90988838 | 90988758 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90989096 | 90989230 | 90989096 | ID=MS.gene40278.t1.exon14;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90989096 | 90989230 | 90989096 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90989338 | 90989663 | 90989338 | ID=MS.gene40278.t1.exon15;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90989338 | 90989663 | 90989338 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90989771 | 90989870 | 90989771 | ID=MS.gene40278.t1.exon16;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90989771 | 90989870 | 90989771 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90990038 | 90990187 | 90990038 | ID=MS.gene40278.t1.exon17;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90990038 | 90990187 | 90990038 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| chr3.3 | exon | 90990371 | 90990517 | 90990371 | ID=MS.gene40278.t1.exon18;Parent=MS.gene40278.t1 |
| chr3.3 | CDS | 90990371 | 90990517 | 90990371 | ID=cds.MS.gene40278.t1;Parent=MS.gene40278.t1 |
| Gene Sequence |
| Protein sequence |
