AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42509

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42509.t1 MTR_7g091690 96.429 504 7 1 1 493 1 504 0.0 982
MS.gene42509.t1 MTR_5g094760 89.881 504 40 1 1 493 1 504 0.0 899
MS.gene42509.t1 MTR_0204s0020 82.413 489 75 1 11 488 5 493 0.0 830
MS.gene42509.t1 MTR_0204s0020 81.800 489 75 2 11 488 5 490 0.0 818
MS.gene42509.t1 MTR_4g116770 78.643 501 94 2 1 488 197 697 0.0 806
MS.gene42509.t1 MTR_0204s0040 78.643 501 94 2 1 488 1 501 0.0 806
MS.gene42509.t1 MTR_4g116790 79.276 497 91 2 9 493 8 504 0.0 797
MS.gene42509.t1 MTR_4g116790 79.888 358 71 1 9 365 8 365 0.0 598
MS.gene42509.t1 MTR_6g087040 57.600 500 198 4 1 487 1 499 0.0 594
MS.gene42509.t1 MTR_6g088375 57.600 500 198 4 1 487 1 499 0.0 594
MS.gene42509.t1 MTR_8g102860 57.778 495 194 4 14 494 13 506 0.0 585
MS.gene42509.t1 MTR_5g006070 56.008 491 200 5 19 493 14 504 0.0 584
MS.gene42509.t1 MTR_3g008160 58.385 483 187 4 19 487 15 497 0.0 583
MS.gene42509.t1 MTR_1g104770 55.467 503 204 6 1 487 1 499 0.0 582
MS.gene42509.t1 MTR_1g104750 54.382 502 210 6 1 487 1 498 0.0 569
MS.gene42509.t1 MTR_1g104780 55.600 500 201 7 1 484 1 495 0.0 540
MS.gene42509.t1 MTR_5g006070 55.044 456 189 5 54 493 1 456 0.0 535
MS.gene42509.t1 MTR_3g008170 53.830 483 208 5 20 487 16 498 0.0 533
MS.gene42509.t1 MTR_8g102860 57.363 455 179 4 54 494 1 454 0.0 533
MS.gene42509.t1 MTR_3g008160 57.366 448 177 4 54 487 1 448 0.0 533
MS.gene42509.t1 MTR_0009s0370 54.065 492 209 4 19 493 13 504 0.0 533
MS.gene42509.t1 MTR_5g082540 53.564 491 212 4 10 485 6 495 0.0 531
MS.gene42509.t1 MTR_5g041550 53.191 517 218 6 1 497 1 513 0.0 528
MS.gene42509.t1 MTR_3g093010 54.032 496 211 4 9 487 4 499 0.0 524
MS.gene42509.t1 MTR_1g038630 53.484 488 211 4 11 483 7 493 0.0 522
MS.gene42509.t1 MTR_3g023480 50.197 508 230 6 9 497 5 508 1.06e-175 504
MS.gene42509.t1 MTR_4g091370 55.925 481 196 4 19 483 15 495 4.50e-175 503
MS.gene42509.t1 MTR_3g074390 51.566 479 216 5 21 484 22 499 2.86e-173 498
MS.gene42509.t1 MTR_3g074410 50.402 498 229 6 1 483 1 495 2.22e-171 493
MS.gene42509.t1 MTR_1g038600 51.527 491 208 5 11 488 7 480 3.30e-171 492
MS.gene42509.t1 MTR_4g090600 55.717 481 197 4 19 483 15 495 1.20e-165 478
MS.gene42509.t1 MTR_3g074270 49.798 496 214 5 1 484 1 473 9.55e-164 473
MS.gene42509.t1 MTR_3g007910 48.805 502 207 6 1 487 1 467 1.18e-163 472
MS.gene42509.t1 MTR_3g093060 53.125 448 192 4 54 483 1 448 2.50e-161 465
MS.gene42509.t1 MTR_3g074380 51.499 367 174 4 1 365 1 365 3.99e-121 360
MS.gene42509.t1 MTR_3g074370 46.729 321 155 5 191 496 20 339 4.31e-101 307
MS.gene42509.t1 MTR_3g074320 46.729 321 155 5 191 496 20 339 1.45e-100 306
MS.gene42509.t1 MTR_3g074340 46.417 321 156 5 191 496 20 339 4.60e-100 305
MS.gene42509.t1 MTR_3g074400 38.170 448 213 10 54 468 1 417 4.69e-87 274
MS.gene42509.t1 MTR_6g088450 30.000 480 283 15 17 467 45 500 8.40e-53 186
MS.gene42509.t1 MTR_5g096000 48.187 193 77 2 1 193 1 170 1.26e-46 164
MS.gene42509.t1 MTR_5g096000 47.101 138 61 2 361 487 162 298 8.48e-29 116
MS.gene42509.t1 MTR_3g084110 26.543 486 315 10 17 480 13 478 2.18e-46 169
MS.gene42509.t1 MTR_8g103500 27.366 486 296 11 22 477 13 471 2.30e-45 166
MS.gene42509.t1 MTR_7g005910 27.049 488 314 11 26 494 32 496 5.39e-45 165
MS.gene42509.t1 MTR_4g069500 25.911 494 313 10 20 481 23 495 6.32e-45 165
MS.gene42509.t1 MTR_1g116650 26.892 502 305 13 7 485 58 520 2.62e-43 161
MS.gene42509.t1 MTR_4g069500 27.381 420 271 8 94 481 28 445 6.45e-43 159
MS.gene42509.t1 MTR_3g074330 49.383 162 71 2 1 155 1 158 8.28e-43 150
MS.gene42509.t1 MTR_3g074360 49.383 162 71 2 1 155 1 158 8.28e-43 150
MS.gene42509.t1 MTR_2g049020 31.549 355 213 6 26 370 25 359 1.62e-42 159
MS.gene42509.t1 MTR_4g072030 26.955 486 298 12 30 479 29 493 1.99e-42 158
MS.gene42509.t1 MTR_3g074310 48.765 162 72 2 1 155 1 158 3.90e-42 148
MS.gene42509.t1 MTR_1g116660 27.711 498 304 16 26 496 34 502 4.51e-42 157
MS.gene42509.t1 MTR_1g038620 46.203 158 68 1 206 363 50 190 5.30e-42 148
MS.gene42509.t1 MTR_4g077740 28.931 477 282 12 28 473 46 496 1.74e-41 155
MS.gene42509.t1 MTR_5g077580 26.391 557 280 15 26 480 25 553 2.12e-40 153
MS.gene42509.t1 MTR_3g116240 26.971 482 290 13 30 473 30 487 3.00e-40 152
MS.gene42509.t1 MTR_2g048720 32.628 331 202 7 26 352 25 338 1.66e-39 151
MS.gene42509.t1 MTR_1g022315 28.643 398 260 8 97 478 1 390 3.45e-39 147
MS.gene42509.t1 MTR_1g022315 28.429 401 263 8 94 478 97 489 5.83e-39 148
MS.gene42509.t1 MTR_5g075300 26.978 493 305 11 22 480 14 485 6.57e-39 148
MS.gene42509.t1 MTR_7g446340 24.125 514 340 11 10 499 38 525 1.45e-38 147
MS.gene42509.t1 MTR_6g007340 24.125 514 340 11 10 499 38 525 1.45e-38 147
MS.gene42509.t1 MTR_8g077890 27.734 512 313 13 10 486 2 491 3.09e-38 146
MS.gene42509.t1 MTR_6g018790 27.991 468 292 11 20 473 102 538 4.93e-38 146
MS.gene42509.t1 MTR_8g077310 28.046 435 284 9 62 478 63 486 7.66e-38 145
MS.gene42509.t1 MTR_2g013310 26.316 475 302 13 28 479 53 502 8.17e-38 145
MS.gene42509.t1 MTR_8g077310 29.000 400 255 9 97 478 1 389 3.28e-37 141
MS.gene42509.t1 MTR_2g013310 26.829 410 272 10 92 479 26 429 4.67e-37 142
MS.gene42509.t1 MTR_7g082270 26.282 468 300 9 20 473 62 498 1.67e-36 141
MS.gene42509.t1 MTR_7g082270 26.585 410 272 6 20 429 62 442 5.36e-35 137
MS.gene42509.t1 MTR_8g077300 26.004 473 298 11 21 473 33 473 9.69e-35 136
MS.gene42509.t1 MTR_2g026160 27.660 376 237 7 26 387 26 380 1.96e-33 134
MS.gene42509.t1 MTR_0064s0040 43.506 154 73 3 17 169 14 154 3.18e-33 124
MS.gene42509.t1 MTR_7g094450 26.617 402 265 8 88 473 82 469 2.57e-32 129
MS.gene42509.t1 MTR_6g087910 26.396 394 259 8 97 473 103 482 6.58e-32 128
MS.gene42509.t1 MTR_5g020270 27.068 399 264 8 97 478 1 389 7.50e-32 126
MS.gene42509.t1 MTR_5g020270 28.058 417 270 10 82 478 83 489 9.21e-32 128
MS.gene42509.t1 MTR_3g080240 24.672 458 301 10 32 473 98 527 5.51e-31 126
MS.gene42509.t1 MTR_7g113960 27.637 474 270 17 27 473 27 454 5.62e-31 125
MS.gene42509.t1 MTR_2g020710 28.398 412 246 16 88 473 2 390 1.72e-29 120
MS.gene42509.t1 MTR_2g020710 28.504 421 249 17 82 473 82 479 1.97e-29 121
MS.gene42509.t1 MTR_4g064820 29.679 374 223 10 2 356 77 429 7.12e-29 119
MS.gene42509.t1 MTR_7g094110 26.566 399 269 8 88 473 84 471 1.01e-28 119
MS.gene42509.t1 MTR_4g118610 28.895 353 218 11 139 473 145 482 5.89e-28 117
MS.gene42509.t1 MTR_7g113970 26.933 401 265 12 88 473 104 491 1.29e-27 116
MS.gene42509.t1 MTR_1g114280 36.735 147 83 3 349 493 21 159 1.15e-26 105
MS.gene42509.t1 MTR_8g077310 27.114 343 235 6 62 400 63 394 1.17e-26 112
MS.gene42509.t1 MTR_5g020270 26.139 417 257 11 82 478 83 468 4.10e-26 111
MS.gene42509.t1 MTR_5g019870 26.714 423 269 12 95 480 64 482 9.64e-26 110
MS.gene42509.t1 MTR_4g013205 24.607 382 263 6 106 473 98 468 1.54e-25 109
MS.gene42509.t1 MTR_2g026140 27.083 336 198 9 33 354 30 332 6.27e-25 108
MS.gene42509.t1 MTR_4g069500 25.817 306 194 7 207 481 3 306 6.83e-24 102
MS.gene42509.t1 MTR_7g094110 25.564 399 253 9 88 473 84 451 3.28e-22 99.8
MS.gene42509.t1 MTR_5g024740 27.682 289 172 8 27 309 4 261 3.07e-21 97.8
MS.gene42509.t1 MTR_3g118530 29.730 222 147 3 94 314 54 267 1.62e-20 95.5
MS.gene42509.t1 MTR_3g116060 31.395 172 113 2 94 262 52 221 2.53e-20 95.1
MS.gene42509.t1 MTR_3g118530 29.730 222 147 3 94 314 54 267 3.09e-20 94.4
MS.gene42509.t1 MTR_2g020710 27.557 352 214 14 82 415 82 410 4.60e-20 92.8
MS.gene42509.t1 MTR_2g020710 27.635 351 213 14 82 414 82 409 6.39e-20 92.4
MS.gene42509.t1 MTR_4g118610 26.269 335 225 8 88 415 94 413 6.94e-20 92.4
MS.gene42509.t1 MTR_7g113960 26.023 342 205 9 24 354 24 328 1.75e-19 90.9
MS.gene42509.t1 MTR_8g073100 25.703 249 167 4 93 336 53 288 1.31e-18 89.7
MS.gene42509.t1 MTR_2g020710 28.472 288 171 12 82 353 82 350 4.38e-18 86.3
MS.gene42509.t1 MTR_5g044910 28.916 166 117 1 93 257 53 218 4.78e-18 87.8
MS.gene42509.t1 MTR_7g113970 26.937 271 183 8 88 354 104 363 7.12e-17 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42509.t1 AT4G02050 76.832 505 106 1 1 494 1 505 0.0 815
MS.gene42509.t1 AT4G02050 76.832 505 106 1 1 494 1 505 0.0 815
MS.gene42509.t1 AT5G26340 56.530 513 203 6 1 497 1 509 0.0 602
MS.gene42509.t1 AT1G77210 56.487 501 198 5 1 485 1 497 0.0 590
MS.gene42509.t1 AT1G77210 56.487 501 198 5 1 485 1 497 0.0 590
MS.gene42509.t1 AT3G19940 54.583 480 204 3 23 488 21 500 0.0 556
MS.gene42509.t1 AT1G11260 55.711 499 201 6 1 483 1 495 0.0 545
MS.gene42509.t1 AT1G50310 54.054 481 206 4 23 488 21 501 0.0 543
MS.gene42509.t1 AT5G23270 53.707 499 212 5 1 483 1 496 0.0 539
MS.gene42509.t1 AT3G19930 53.175 504 214 5 1 488 1 498 0.0 532
MS.gene42509.t1 AT3G19930 53.175 504 214 5 1 488 1 498 0.0 532
MS.gene42509.t1 AT4G21480 54.251 494 210 4 7 485 3 495 0.0 527
MS.gene42509.t1 AT3G05960 50.100 499 236 3 10 495 4 502 2.53e-179 513
MS.gene42509.t1 AT5G26250 51.143 481 223 2 19 487 14 494 9.53e-178 509
MS.gene42509.t1 AT1G34580 50.398 502 227 6 1 484 1 498 2.05e-175 503
MS.gene42509.t1 AT5G61520 47.750 511 239 6 10 497 2 507 1.60e-167 483
MS.gene42509.t1 AT1G34580 50.334 449 204 5 54 484 1 448 8.05e-158 456
MS.gene42509.t1 AT1G07340 47.305 501 241 7 1 485 1 494 4.50e-156 454
MS.gene42509.t1 AT5G61520 48.164 463 217 5 53 497 2 459 7.93e-151 439
MS.gene42509.t1 AT1G77210 54.519 343 144 2 155 485 6 348 4.92e-137 400
MS.gene42509.t1 AT1G50310 51.437 348 155 3 155 488 11 358 2.35e-129 381
MS.gene42509.t1 AT4G36670 28.231 503 304 13 12 480 3 482 4.31e-45 165
MS.gene42509.t1 AT3G18830 27.823 496 291 13 26 479 35 505 1.76e-44 164
MS.gene42509.t1 AT2G43330 27.938 519 321 15 7 497 11 504 4.24e-44 163
MS.gene42509.t1 AT2G18480 29.661 472 265 15 41 473 36 479 3.81e-43 160
MS.gene42509.t1 AT2G16120 27.756 508 309 10 1 473 1 485 9.00e-43 159
MS.gene42509.t1 AT5G59250 29.019 479 284 12 27 473 98 552 1.48e-41 156
MS.gene42509.t1 AT2G16130 26.857 525 328 10 9 499 9 511 3.50e-41 155
MS.gene42509.t1 AT1G75220 29.561 433 262 9 78 478 66 487 1.37e-39 150
MS.gene42509.t1 AT3G05165 29.167 408 253 10 85 473 69 459 5.76e-39 148
MS.gene42509.t1 AT3G05165 29.167 408 253 10 85 473 69 459 5.76e-39 148
MS.gene42509.t1 AT3G05165 29.167 408 253 10 85 473 69 459 5.76e-39 148
MS.gene42509.t1 AT5G17010 27.000 500 310 13 7 473 21 498 5.74e-38 145
MS.gene42509.t1 AT5G17010 27.000 500 310 13 7 473 21 498 5.74e-38 145
MS.gene42509.t1 AT5G17010 27.000 500 310 13 7 473 21 498 5.74e-38 145
MS.gene42509.t1 AT5G27350 26.789 489 306 13 3 473 6 460 1.39e-37 144
MS.gene42509.t1 AT5G16150 27.660 470 291 12 20 473 102 538 1.39e-36 142
MS.gene42509.t1 AT5G16150 27.660 470 291 12 20 473 102 538 1.39e-36 142
MS.gene42509.t1 AT5G16150 27.660 470 291 12 20 473 102 538 1.39e-36 142
MS.gene42509.t1 AT5G27360 26.582 474 287 10 22 473 30 464 1.89e-36 141
MS.gene42509.t1 AT1G05030 27.015 459 287 12 33 473 85 513 2.53e-36 141
MS.gene42509.t1 AT1G08930 28.362 409 253 11 86 473 98 487 3.75e-36 140
MS.gene42509.t1 AT1G08930 28.362 409 253 11 86 473 98 487 3.75e-36 140
MS.gene42509.t1 AT1G30220 30.137 365 224 9 1 354 1 345 4.04e-36 141
MS.gene42509.t1 AT5G27360 26.582 474 287 10 22 473 78 512 5.22e-36 140
MS.gene42509.t1 AT1G19450 29.493 434 261 10 78 478 67 488 5.85e-36 140
MS.gene42509.t1 AT1G08890 25.911 494 307 14 1 473 1 456 8.51e-36 139
MS.gene42509.t1 AT4G16480 29.134 381 231 9 9 371 5 364 1.63e-35 140
MS.gene42509.t1 AT4G16480 29.134 381 231 9 9 371 5 364 1.63e-35 140
MS.gene42509.t1 AT4G16480 29.134 381 231 9 9 371 5 364 1.63e-35 140
MS.gene42509.t1 AT5G27360 29.444 360 222 8 131 473 16 360 2.94e-35 135
MS.gene42509.t1 AT5G27360 29.444 360 222 8 131 473 16 360 2.94e-35 135
MS.gene42509.t1 AT1G08900 27.654 405 257 10 88 473 25 412 3.87e-35 136
MS.gene42509.t1 AT1G05030 27.561 410 267 10 82 473 64 461 6.30e-35 136
MS.gene42509.t1 AT1G08900 27.654 405 257 10 88 473 59 446 8.32e-35 136
MS.gene42509.t1 AT1G08900 27.654 405 257 10 88 473 67 454 8.88e-35 136
MS.gene42509.t1 AT1G08900 27.654 405 257 10 88 473 67 454 8.88e-35 136
MS.gene42509.t1 AT2G20780 25.911 494 307 14 12 478 40 501 1.02e-34 137
MS.gene42509.t1 AT2G35740 28.378 370 234 8 26 383 25 375 1.06e-34 137
MS.gene42509.t1 AT3G03090 26.181 508 310 15 4 473 18 498 1.89e-34 135
MS.gene42509.t1 AT3G05160 29.167 408 251 10 86 473 12 401 3.19e-34 133
MS.gene42509.t1 AT3G05160 29.167 408 251 10 86 473 12 401 3.19e-34 133
MS.gene42509.t1 AT3G05160 29.095 409 252 10 85 473 60 450 4.96e-34 134
MS.gene42509.t1 AT3G05165 28.933 356 227 8 85 431 69 407 1.78e-33 133
MS.gene42509.t1 AT2G48020 25.257 487 316 10 2 473 4 457 2.01e-33 132
MS.gene42509.t1 AT2G48020 25.257 487 316 10 2 473 4 457 2.01e-33 132
MS.gene42509.t1 AT3G05165 28.933 356 227 8 86 432 70 408 2.27e-33 132
MS.gene42509.t1 AT3G05165 28.933 356 227 8 86 432 70 408 2.27e-33 132
MS.gene42509.t1 AT5G18840 28.738 428 253 13 82 480 77 481 7.14e-32 128
MS.gene42509.t1 AT2G20780 27.007 411 268 11 91 478 42 443 9.08e-32 127
MS.gene42509.t1 AT4G04750 27.228 404 262 9 88 473 78 467 1.16e-31 127
MS.gene42509.t1 AT4G04750 27.228 404 262 9 88 473 78 467 1.16e-31 127
MS.gene42509.t1 AT4G04750 27.228 404 262 9 88 473 122 511 1.42e-31 128
MS.gene42509.t1 AT3G05400 25.445 393 265 10 96 473 76 455 1.83e-31 127
MS.gene42509.t1 AT3G05400 27.807 374 238 11 119 473 75 435 5.67e-31 125
MS.gene42509.t1 AT1G54730 26.477 457 291 13 33 475 38 463 6.00e-31 125
MS.gene42509.t1 AT4G04760 28.395 405 257 9 88 473 14 404 3.38e-30 122
MS.gene42509.t1 AT1G08900 27.841 352 228 8 88 430 67 401 5.19e-30 122
MS.gene42509.t1 AT4G04760 28.395 405 257 9 88 473 73 463 7.60e-30 122
MS.gene42509.t1 AT3G05155 24.566 403 274 10 86 473 67 454 4.84e-28 117
MS.gene42509.t1 AT5G27360 24.818 411 259 8 22 421 30 401 9.83e-27 112
MS.gene42509.t1 AT4G04760 27.561 410 251 10 88 473 73 460 1.85e-26 112
MS.gene42509.t1 AT1G54730 25.598 418 275 12 33 445 38 424 6.68e-26 110
MS.gene42509.t1 AT1G54730 25.602 457 274 13 33 475 38 442 8.32e-26 110
MS.gene42509.t1 AT1G67300 25.000 340 235 7 98 430 105 431 1.24e-25 110
MS.gene42509.t1 AT1G67300 24.332 337 240 5 98 430 105 430 1.94e-25 109
MS.gene42509.t1 AT1G67300 24.332 337 240 5 98 430 105 430 1.94e-25 109
MS.gene42509.t1 AT1G67300 24.332 337 240 5 98 430 105 430 1.95e-25 109
MS.gene42509.t1 AT1G67300 24.332 337 240 5 98 430 105 430 1.95e-25 109
MS.gene42509.t1 AT1G67300 24.620 329 233 5 98 422 105 422 4.48e-25 107
MS.gene42509.t1 AT1G67300 24.620 329 233 5 98 422 105 422 4.48e-25 107
MS.gene42509.t1 AT1G79820 24.873 394 263 9 98 473 108 486 4.79e-25 108
MS.gene42509.t1 AT1G79820 24.873 394 263 9 98 473 108 486 4.79e-25 108
MS.gene42509.t1 AT1G08920 24.455 413 260 10 88 473 74 461 5.33e-25 108
MS.gene42509.t1 AT3G05150 25.210 476 298 15 22 476 30 468 5.43e-25 108
MS.gene42509.t1 AT3G05150 25.210 476 298 15 22 476 30 468 6.92e-25 107
MS.gene42509.t1 AT3G05150 25.210 476 298 15 22 476 30 468 6.92e-25 107
MS.gene42509.t1 AT1G79820 24.702 336 238 6 98 430 108 431 1.30e-24 106
MS.gene42509.t1 AT1G08920 24.048 420 260 10 88 473 74 468 4.74e-24 105
MS.gene42509.t1 AT3G51490 28.692 237 151 4 27 262 4 223 8.14e-23 102
MS.gene42509.t1 AT3G51490 28.692 237 151 4 27 262 4 223 1.00e-22 102
MS.gene42509.t1 AT1G08920 24.868 378 235 9 88 448 74 419 2.30e-22 100
MS.gene42509.t1 AT3G51490 30.588 170 117 1 94 262 4 173 5.51e-22 100
MS.gene42509.t1 AT1G54730 24.880 418 257 13 33 445 38 403 7.73e-21 95.1
MS.gene42509.t1 AT1G54730 24.611 386 257 10 33 415 38 392 1.07e-20 94.7
MS.gene42509.t1 AT1G54730 24.611 386 257 10 33 415 38 392 1.07e-20 94.7
MS.gene42509.t1 AT3G20460 24.879 414 272 11 82 473 86 482 1.47e-20 95.1
MS.gene42509.t1 AT2G48020 23.947 380 254 7 2 377 4 352 4.88e-20 92.4
MS.gene42509.t1 AT2G48020 24.090 357 236 7 2 354 4 329 9.61e-19 88.2
MS.gene42509.t1 AT3G05155 24.354 271 191 5 86 354 67 325 2.27e-18 86.7
MS.gene42509.t1 AT1G54730 25.231 325 211 9 33 354 38 333 3.42e-18 86.3
MS.gene42509.t1 AT5G17010 24.597 496 267 18 7 473 18 435 1.96e-17 85.1
MS.gene42509.t1 AT1G54730 25.436 287 185 8 33 316 38 298 4.52e-17 82.8
MS.gene42509.t1 AT1G54730 25.436 287 185 8 33 316 38 298 4.52e-17 82.8
MS.gene42509.t1 AT1G20840 29.282 181 125 2 83 262 43 221 5.55e-17 84.7
MS.gene42509.t1 AT1G20840 29.282 181 125 2 83 262 43 221 5.55e-17 84.7
MS.gene42509.t1 AT1G79820 23.096 394 222 8 98 473 108 438 7.99e-17 83.2
MS.gene42509.t1 AT1G54730 25.436 287 185 8 33 316 38 298 1.37e-16 82.0
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.22e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.22e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.22e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT4G35300 31.169 154 105 1 111 263 71 224 2.35e-16 82.8
MS.gene42509.t1 AT1G79820 23.562 365 198 8 127 473 75 376 4.44e-14 74.3

Find 155 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTATGATGTTGGAATTTC+AGG 0.080575 7.1:+15666036 MS.gene42509:CDS
ATAGCCAATATGATAAATTT+TGG 0.137172 7.1:+15668039 MS.gene42509:CDS
ATGGGAATACCTTTGGTTTC+AGG 0.188422 7.1:-15669179 None:intergenic
TTTCAAGTGGCAACAACTTT+TGG 0.211854 7.1:+15668009 MS.gene42509:CDS
CTCGGCATTGGCATTGGATT+TGG 0.233409 7.1:+15667499 MS.gene42509:CDS
ATTATTCTTGGGGTCAAGTT+TGG 0.261275 7.1:+15668864 MS.gene42509:CDS
TATAAAGCTCTGCCCTTTCC+TGG 0.263623 7.1:-15665948 None:intergenic
CTTCTCTGCTCATTCAAGTT+TGG 0.265759 7.1:+15669095 MS.gene42509:CDS
CATTACTGTGATGTGTTTAC+AGG 0.274856 7.1:-15669254 None:intergenic
TGTTCCAAAATTTATCATAT+TGG 0.279298 7.1:-15668043 None:intergenic
GTCCAAAGGCTATTCAATAT+TGG 0.296291 7.1:+15668902 MS.gene42509:CDS
TTATTCTTGGGGTCAAGTTT+GGG 0.297946 7.1:+15668865 MS.gene42509:CDS
AATAGCCTTTGGACAGTTCT+TGG 0.304135 7.1:-15668893 None:intergenic
TGCCTATTTGTTGTAGCATT+TGG 0.311203 7.1:+15668939 MS.gene42509:CDS
GTTATAGTTGCAATTATTCT+TGG 0.312542 7.1:+15668852 MS.gene42509:CDS
ACCTCTTCTCTATACATTGC+CGG 0.322689 7.1:+15667328 MS.gene42509:CDS
GCTTGCATTGTTGCAGCTAC+AGG 0.332908 7.1:+15666000 MS.gene42509:CDS
CTCTTCAATGGGAATACCTT+TGG 0.335400 7.1:-15669186 None:intergenic
ATGGAGGCTGTCCCTAGGCT+TGG 0.353565 7.1:+15668086 MS.gene42509:CDS
GAAAGGGCAGAGCTTTATAA+AGG 0.363824 7.1:+15665952 MS.gene42509:CDS
TGTGGAGGAAGCATTGGTTC+TGG 0.368859 7.1:+15669219 MS.gene42509:CDS
CATAAATGCCATCTCTTCAA+TGG 0.370534 7.1:-15669198 None:intergenic
TTCAATATTGGTTGTAGTTG+TGG 0.376102 7.1:+15668914 MS.gene42509:CDS
ATCCAAATGCTACAACAAAT+AGG 0.379073 7.1:-15668941 None:intergenic
TTATAGTTGCAATTATTCTT+GGG 0.380461 7.1:+15668853 MS.gene42509:CDS
CGTCCATACTTCCTTGTAAT+GGG 0.397253 7.1:-15667376 None:intergenic
TCTCCCATTACAAGGAAGTA+TGG 0.398239 7.1:+15667373 MS.gene42509:CDS
CTCTACTCCTCGGCTTTGAC+TGG 0.402079 7.1:+15668447 MS.gene42509:CDS
TGATGCAGAGTTTGAAGATA+TGG 0.403313 7.1:+15668239 MS.gene42509:CDS
TGGCATTGGATTTGGAAATC+AGG 0.404411 7.1:+15667507 MS.gene42509:CDS
AGAACGAGGATTAGAAGAAA+GGG 0.404693 7.1:+15668176 MS.gene42509:CDS
TTGTAATGGGAGATGCAATC+AGG 0.405356 7.1:-15667363 None:intergenic
AACCAATATTGAATAGCCTT+TGG 0.406744 7.1:-15668904 None:intergenic
CTGTTTCAAAGCATGGGATT+CGG 0.410422 7.1:+15668411 MS.gene42509:CDS
GGCCGTGTTATGCTCGGCAT+TGG 0.424294 7.1:+15667487 MS.gene42509:CDS
GGTCGTGGGGCCCACTTGGT+TGG 0.426073 7.1:+15668964 MS.gene42509:CDS
TAGAACGAGGATTAGAAGAA+AGG 0.427403 7.1:+15668175 MS.gene42509:CDS
CCTGCTGAACGGATTTCTAA+TGG 0.431912 7.1:-15669008 None:intergenic
CAAGAACAGAACAACAAATA+TGG 0.432549 7.1:-15669156 None:intergenic
CCTCGTTCTATTAAGCTGTT+CGG 0.436515 7.1:-15668162 None:intergenic
TTTATAAAGGGAAAGTTACT+TGG 0.437568 7.1:+15665965 MS.gene42509:CDS
GTTATGCTCGGCATTGGCAT+TGG 0.439563 7.1:+15667493 MS.gene42509:CDS
CCATTAGAAATCCGTTCAGC+AGG 0.440401 7.1:+15669008 MS.gene42509:CDS
TATTAAGCTGTTCGGAGTCT+CGG 0.440925 7.1:-15668154 None:intergenic
CCTAGGCTTGGCTGCCGTAC+CGG 0.442685 7.1:+15668098 MS.gene42509:CDS
GTGGGGCCCACTTGGTTGGA+CGG 0.449151 7.1:+15668968 MS.gene42509:CDS
GGTGGTAGTAGCTTTCTGAT+TGG 0.452031 7.1:+15667418 MS.gene42509:CDS
AAGCTCCTAGAGAAAATTAG+AGG 0.455916 7.1:+15668204 MS.gene42509:CDS
CCGGTACGGCAGCCAAGCCT+AGG 0.456998 7.1:-15668098 None:intergenic
TTTCGAGTATGTTACGAAAC+GGG 0.458322 7.1:-15668296 None:intergenic
ACATACTCGAAAGAAGGTAT+AGG 0.458724 7.1:+15668307 MS.gene42509:CDS
ATTAAGCTGTTCGGAGTCTC+GGG 0.459490 7.1:-15668153 None:intergenic
TAGGGACAGCCTCCATCCCC+AGG 0.465250 7.1:-15668079 None:intergenic
TGGGGATGGAGGCTGTCCCT+AGG 0.469496 7.1:+15668081 MS.gene42509:CDS
CATTGCAACAGTTGATAAGC+TGG 0.471188 7.1:+15668500 MS.gene42509:CDS
AGGTAAATGCCGCAAGGCCC+TGG 0.473138 7.1:-15667309 None:intergenic
ATAAATGCCATCTCTTCAAT+GGG 0.473898 7.1:-15669197 None:intergenic
GGATGGTCGTGGGGCCCACT+TGG 0.474738 7.1:+15668960 MS.gene42509:CDS
CATTTATGTGGAGGAAGCAT+TGG 0.474974 7.1:+15669213 MS.gene42509:CDS
TCCGGTGCTGTTTCAAAGCA+TGG 0.475103 7.1:+15668404 MS.gene42509:CDS
GCTGGTGGGTCTTTAACAAC+AGG 0.477560 7.1:+15665916 MS.gene42509:CDS
TTCCATTCTCTTCTATGCTC+CGG 0.477795 7.1:+15668386 MS.gene42509:CDS
TTGTAGCATTTGGATGGTCG+TGG 0.479330 7.1:+15668949 MS.gene42509:CDS
TACAAGGAAGTATGGACGTC+GGG 0.482939 7.1:+15667381 MS.gene42509:CDS
ACAATTGCCATCACCAACTC+TGG 0.484629 7.1:-15668330 None:intergenic
CTTGCATTGTTGCAGCTACA+GGG 0.485624 7.1:+15666001 MS.gene42509:CDS
TCCACTTTATTTGTCAGAGA+TGG 0.487346 7.1:+15667951 MS.gene42509:CDS
CCAGTCAAGATTTGTGAAGT+TGG 0.488855 7.1:-15668357 None:intergenic
ACGTCCATACTTCCTTGTAA+TGG 0.497070 7.1:-15667377 None:intergenic
CTTTCGAGTATGTTACGAAA+CGG 0.501595 7.1:-15668297 None:intergenic
AATCAGGGATGCAACTAAAC+CGG 0.502456 7.1:-15667347 None:intergenic
AACCTCACAATGCTGATCTT+CGG 0.502742 7.1:+15667466 MS.gene42509:CDS
AATCCTCCTCGCAGGTGGGT+TGG 0.510788 7.1:-15667976 None:intergenic
TTGAAGAGATGGCATTTATG+TGG 0.513777 7.1:+15669201 MS.gene42509:CDS
TGTAGCATTTGGATGGTCGT+GGG 0.515391 7.1:+15668950 MS.gene42509:CDS
TGTTCAATCCTCCTCGCAGG+TGG 0.517855 7.1:-15667981 None:intergenic
CAGCTTATCAACTGTTGCAA+TGG 0.520597 7.1:-15668499 None:intergenic
AATACAAATGATCATATGTC+AGG 0.523087 7.1:+15668551 MS.gene42509:CDS
AAAGGGCAGAGCTTTATAAA+GGG 0.526295 7.1:+15665953 MS.gene42509:CDS
CCAACTTCACAAATCTTGAC+TGG 0.529164 7.1:+15668357 MS.gene42509:CDS
CCGGTGCTGTTTCAAAGCAT+GGG 0.532079 7.1:+15668405 MS.gene42509:CDS
TCTAATGGAAATATCTCACT+TGG 0.533960 7.1:-15668993 None:intergenic
AGATTAAACCCTGGGGATGG+AGG 0.535327 7.1:+15668070 MS.gene42509:CDS
AACACAGAAGATTAAACCCT+GGG 0.537070 7.1:+15668062 MS.gene42509:CDS
CAGCAGGGAAGAATTCTTCA+AGG 0.539718 7.1:-15667234 None:intergenic
GCCATCTCTGACAAATAAAG+TGG 0.544231 7.1:-15667952 None:intergenic
AGGAGAATCCATAAAATGGC+TGG 0.544781 7.1:+15665898 None:intergenic
AGGTATTCCCATTGAAGAGA+TGG 0.545003 7.1:+15669190 MS.gene42509:CDS
TACTCCTCGGCTTTGACTGG+TGG 0.545786 7.1:+15668450 MS.gene42509:CDS
TGCATTGTTGCAGCTACAGG+GGG 0.547012 7.1:+15666003 MS.gene42509:CDS
TATTTGTTGTAGCATTTGGA+TGG 0.547450 7.1:+15668943 MS.gene42509:CDS
ATCTTCGGCCGTGTTATGCT+CGG 0.549989 7.1:+15667481 MS.gene42509:CDS
CGTCATCAAAAGAGCCGGTA+CGG 0.552962 7.1:-15668112 None:intergenic
TTCGTAACATACTCGAAAGA+AGG 0.553553 7.1:+15668301 MS.gene42509:CDS
CACCGGAGCATAGAAGAGAA+TGG 0.554274 7.1:-15668388 None:intergenic
TATAGTTGCAATTATTCTTG+GGG 0.555101 7.1:+15668854 MS.gene42509:CDS
CAGGTGTGGTAGACCAGGAA+AGG 0.556274 7.1:+15665935 MS.gene42509:CDS
AGAGTTCTTCTTATCAGTGG+TGG 0.556292 7.1:+15668528 MS.gene42509:CDS
CTGTTCTTGCCTGAAACCAA+AGG 0.561132 7.1:+15669170 MS.gene42509:CDS
TTACTGCAAGTACGACAACC+AGG 0.562937 7.1:+15667291 MS.gene42509:CDS
TTCTTCAAGGAAGTCATCCA+TGG 0.566424 7.1:-15667221 None:intergenic
AACAACAGGTGTGGTAGACC+AGG 0.566567 7.1:+15665930 MS.gene42509:CDS
GAACGAGGATTAGAAGAAAG+GGG 0.568609 7.1:+15668177 MS.gene42509:CDS
TGATTGCATCTCCCATTACA+AGG 0.569353 7.1:+15667365 MS.gene42509:CDS
TGTAATGGGAGATGCAATCA+GGG 0.578905 7.1:-15667362 None:intergenic
GGTCATGAGGGTAATCCAGC+CGG 0.579949 7.1:-15669135 None:intergenic
AACAGGTGGGGTGACATCCA+TGG 0.581256 7.1:+15667204 MS.gene42509:intron
CGTCGGGCAAGTATCATCAC+TGG 0.581520 7.1:+15667397 MS.gene42509:CDS
ATTGAACATGATGTTTCAAG+TGG 0.581559 7.1:+15667996 MS.gene42509:CDS
GAGGATTAGAAGAAAGGGGA+AGG 0.582549 7.1:+15668181 MS.gene42509:CDS
TATTCTTGGGGTCAAGTTTG+GGG 0.582970 7.1:+15668866 MS.gene42509:CDS
GAACAACAAATATGGTCATG+AGG 0.584422 7.1:-15669148 None:intergenic
TGCCAATGCCGAGCATAACA+CGG 0.585387 7.1:-15667489 None:intergenic
ATTGCAACAGTTGATAAGCT+GGG 0.585996 7.1:+15668501 MS.gene42509:CDS
TATGGTTGATGCAAGCAAGT+TGG 0.586122 7.1:+15668257 MS.gene42509:CDS
TCATGTTCAATCCTCCTCGC+AGG 0.587735 7.1:-15667984 None:intergenic
TGATACTCTGCCCTGCTGAA+CGG 0.588483 7.1:-15669019 None:intergenic
CGGTACGGCAGCCAAGCCTA+GGG 0.588612 7.1:-15668097 None:intergenic
CAACAGTTGATAAGCTGGGA+AGG 0.589487 7.1:+15668505 MS.gene42509:CDS
AAGAGATGGCATTTATGTGG+AGG 0.590666 7.1:+15669204 MS.gene42509:CDS
AGAAGATTAAACCCTGGGGA+TGG 0.590747 7.1:+15668067 MS.gene42509:CDS
CCTATCGTCATCAAAAGAGC+CGG 0.591632 7.1:-15668117 None:intergenic
CCCATGCTTTGAAACAGCAC+CGG 0.593331 7.1:-15668405 None:intergenic
AGGGACAGCCTCCATCCCCA+GGG 0.595397 7.1:-15668078 None:intergenic
AGGAGAGTTCTTCTTATCAG+TGG 0.598221 7.1:+15668525 MS.gene42509:CDS
AGAATCCATAAAATGGCTGG+TGG 0.600321 7.1:+15665901 None:intergenic
TTGCATTGTTGCAGCTACAG+GGG 0.600682 7.1:+15666002 MS.gene42509:CDS
AACAACAAATATGGTCATGA+GGG 0.601571 7.1:-15669147 None:intergenic
AGACGCTTCGCTCTACTCCT+CGG 0.602710 7.1:+15668437 MS.gene42509:CDS
TTTCAAAGCATGGGATTCGG+TGG 0.606366 7.1:+15668414 MS.gene42509:CDS
AGGTGTGGTAGACCAGGAAA+GGG 0.606944 7.1:+15665936 MS.gene42509:CDS
ACCGGCAATGTATAGAGAAG+AGG 0.612477 7.1:-15667329 None:intergenic
GTTCAATCCTCCTCGCAGGT+GGG 0.618257 7.1:-15667980 None:intergenic
AAGAAGGTATAGGCCAGAGT+TGG 0.622934 7.1:+15668317 MS.gene42509:CDS
CATTAGAAATCCGTTCAGCA+GGG 0.625750 7.1:+15669009 MS.gene42509:CDS
GTATAGGCCAGAGTTGGTGA+TGG 0.643752 7.1:+15668323 MS.gene42509:CDS
GAATCCATAAAATGGCTGGT+GGG 0.644063 7.1:+15665902 None:intergenic
GTACGACAACCAGGGCCTTG+CGG 0.646710 7.1:+15667300 MS.gene42509:CDS
GGCCGAAGATCAGCATTGTG+AGG 0.651398 7.1:-15667468 None:intergenic
CTTGGAACCGTCCAACCAAG+TGG 0.658194 7.1:-15668975 None:intergenic
CCGAACAGCTTAATAGAACG+AGG 0.659416 7.1:+15668162 MS.gene42509:CDS
TTGGAACCGTCCAACCAAGT+GGG 0.660848 7.1:-15668974 None:intergenic
GTAGCATTTGGATGGTCGTG+GGG 0.662597 7.1:+15668951 MS.gene42509:CDS
GAGAAGAGGTAAATGCCGCA+AGG 0.671707 7.1:-15667315 None:intergenic
CGGGCAAGTATCATCACTGG+TGG 0.673943 7.1:+15667400 MS.gene42509:CDS
TGGGTCTTTAACAACAGGTG+TGG 0.674309 7.1:+15665921 MS.gene42509:CDS
AACGCCACCAGTCAAAGCCG+AGG 0.679011 7.1:-15668454 None:intergenic
GCACCAACCCACCTGCGAGG+AGG 0.681672 7.1:+15667973 MS.gene42509:CDS
ATGGCACCAACCCACCTGCG+AGG 0.683221 7.1:+15667970 MS.gene42509:CDS
GAACACAGAAGATTAAACCC+TGG 0.684252 7.1:+15668061 MS.gene42509:CDS
GATAACCAAGAACTGTCCAA+AGG 0.687640 7.1:+15668888 MS.gene42509:CDS
TACTGCAAGTACGACAACCA+GGG 0.691497 7.1:+15667292 MS.gene42509:CDS
TGAATGAGCAGAGAAGAGCA+AGG 0.694537 7.1:-15669088 None:intergenic
TTACAAGGAAGTATGGACGT+CGG 0.698563 7.1:+15667380 MS.gene42509:CDS
ACACAGAAGATTAAACCCTG+GGG 0.794077 7.1:+15668063 MS.gene42509:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACATACATTAAAATAAT+AGG + chr7.1:15668662-15668681 MS.gene42509:intron 10.0%
!! GAAATATTAAAGATATATTT+AGG + chr7.1:15667016-15667035 MS.gene42509:intron 10.0%
!!! ATTTTAGTTCATAAAATTTA+CGG + chr7.1:15667806-15667825 MS.gene42509:intron 10.0%
!! AAGATTCAAATAATGAATTA+AGG - chr7.1:15666067-15666086 None:intergenic 15.0%
!! ACATTAAAATAATAGGAAAA+AGG + chr7.1:15668669-15668688 MS.gene42509:intron 15.0%
!!! AATATTTTTAATCTCAATTC+AGG + chr7.1:15666593-15666612 MS.gene42509:intron 15.0%
!!! AGTAAAATTTTAAACTATTC+TGG + chr7.1:15666275-15666294 MS.gene42509:intron 15.0%
!!! TTTTAGTTCATAAAATTTAC+GGG + chr7.1:15667807-15667826 MS.gene42509:intron 15.0%
!!! TTTTATTACAACTAAATAGA+GGG - chr7.1:15668735-15668754 None:intergenic 15.0%
!!! TTTTTATTACAACTAAATAG+AGG - chr7.1:15668736-15668755 None:intergenic 15.0%
!! AAATATTGTGAATTAAGCTT+TGG - chr7.1:15666580-15666599 None:intergenic 20.0%
!! AATATTGTGAATTAAGCTTT+GGG - chr7.1:15666579-15666598 None:intergenic 20.0%
!! GACTAAAAGTTATTGAAATA+AGG - chr7.1:15667072-15667091 None:intergenic 20.0%
!! TGTTCCAAAATTTATCATAT+TGG - chr7.1:15668046-15668065 None:intergenic 20.0%
!! TTATAGTTGCAATTATTCTT+GGG + chr7.1:15668853-15668872 MS.gene42509:CDS 20.0%
!! TTGTTTACTACTAAGAATTT+CGG - chr7.1:15666930-15666949 None:intergenic 20.0%
!!! AAATAATTTGTCAACTTTTG+AGG - chr7.1:15667897-15667916 None:intergenic 20.0%
!!! ATAGCCAATATGATAAATTT+TGG + chr7.1:15668039-15668058 MS.gene42509:CDS 20.0%
!!! ATGGTAATTTTTTCTATGAA+AGG + chr7.1:15667670-15667689 MS.gene42509:intron 20.0%
!!! TAGCAAATTGATAATGAAAT+GGG - chr7.1:15666469-15666488 None:intergenic 20.0%
!!! TTAAACACAATTTGTTGATA+AGG + chr7.1:15666204-15666223 MS.gene42509:intron 20.0%
! AATAAGACATTCTATCATGA+TGG - chr7.1:15666529-15666548 None:intergenic 25.0%
! AATACAAATGATCATATGTC+AGG + chr7.1:15668551-15668570 MS.gene42509:CDS 25.0%
! AGAATTATTTCCCAACTTAA+TGG - chr7.1:15668628-15668647 None:intergenic 25.0%
! ATAATAGGAAAAAGGCAATA+AGG + chr7.1:15668677-15668696 MS.gene42509:intron 25.0%
! ATATTGTGAATTAAGCTTTG+GGG - chr7.1:15666578-15666597 None:intergenic 25.0%
! ATGCATGTTATATGATTAAC+AGG + chr7.1:15667187-15667206 MS.gene42509:intron 25.0%
! ATGTTATATGATTAACAGGT+GGG + chr7.1:15667191-15667210 MS.gene42509:intron 25.0%
! ATTGATCATGAATTCATCAT+AGG - chr7.1:15667606-15667625 None:intergenic 25.0%
! CAAATAATGAAATTGATGCA+AGG - chr7.1:15667124-15667143 None:intergenic 25.0%
! CAATTACGAAAGTGAAAAAA+AGG - chr7.1:15669058-15669077 None:intergenic 25.0%
! GTTATAGTTGCAATTATTCT+TGG + chr7.1:15668852-15668871 MS.gene42509:CDS 25.0%
! TATAGTTGCAATTATTCTTG+GGG + chr7.1:15668854-15668873 MS.gene42509:CDS 25.0%
! TGTATTTCCATCACAAATTT+GGG + chr7.1:15666684-15666703 MS.gene42509:intron 25.0%
! TTGTATTTCCATCACAAATT+TGG + chr7.1:15666683-15666702 MS.gene42509:intron 25.0%
! TTTATAAAGGGAAAGTTACT+TGG + chr7.1:15665965-15665984 MS.gene42509:CDS 25.0%
! TTTCTATTACTAAATCTACG+AGG - chr7.1:15667000-15667019 None:intergenic 25.0%
!! TTCTGTTTTCAATGTTTTTC+AGG + chr7.1:15666101-15666120 MS.gene42509:intron 25.0%
!!! ACTTTTAGTCTTAATGTAGT+TGG + chr7.1:15667082-15667101 MS.gene42509:intron 25.0%
!!! AGCAAATTGATAATGAAATG+GGG - chr7.1:15666468-15666487 None:intergenic 25.0%
!!! GAAACATTTTTTTCCTTTAC+TGG + chr7.1:15667638-15667657 MS.gene42509:intron 25.0%
!!! GTAATTTTTTCTATGAAAGG+AGG + chr7.1:15667673-15667692 MS.gene42509:intron 25.0%
!!! GTAGCAAATTGATAATGAAA+TGG - chr7.1:15666470-15666489 None:intergenic 25.0%
!!! TACCTCTTTCTTCAATTTTT+TGG + chr7.1:15666353-15666372 MS.gene42509:intron 25.0%
!!! TTCAATTTTTTGGTGTAAAC+CGG + chr7.1:15666363-15666382 MS.gene42509:intron 25.0%
AACAACAAATATGGTCATGA+GGG - chr7.1:15669150-15669169 None:intergenic 30.0%
AACCAATATTGAATAGCCTT+TGG - chr7.1:15668907-15668926 None:intergenic 30.0%
AAGGAAAGATAGTAATGTGA+TGG + chr7.1:15667831-15667850 MS.gene42509:intron 30.0%
ACAAGTATCAAACAGTTTGA+AGG + chr7.1:15667742-15667761 MS.gene42509:intron 30.0%
ATAAATGCCATCTCTTCAAT+GGG - chr7.1:15669200-15669219 None:intergenic 30.0%
ATCATGAATTCATCATAGGT+AGG - chr7.1:15667602-15667621 None:intergenic 30.0%
ATCCAAATGCTACAACAAAT+AGG - chr7.1:15668944-15668963 None:intergenic 30.0%
ATTGAACATGATGTTTCAAG+TGG + chr7.1:15667996-15668015 MS.gene42509:CDS 30.0%
ATTTGTGATTCAGAATGCTA+AGG - chr7.1:15666819-15666838 None:intergenic 30.0%
CAAACTGTTTGATACTTGTT+TGG - chr7.1:15667741-15667760 None:intergenic 30.0%
CAAGAACAGAACAACAAATA+TGG - chr7.1:15669159-15669178 None:intergenic 30.0%
CAAGAATTGGTCAATAACAA+GGG + chr7.1:15666625-15666644 MS.gene42509:intron 30.0%
CAAGTATCAAACAGTTTGAA+GGG + chr7.1:15667743-15667762 MS.gene42509:intron 30.0%
CACCAAAAAATTGAAGAAAG+AGG - chr7.1:15666358-15666377 None:intergenic 30.0%
CATGTTATATGATTAACAGG+TGG + chr7.1:15667190-15667209 MS.gene42509:intron 30.0%
GTGGTTAATATATGATCTGA+AGG - chr7.1:15666772-15666791 None:intergenic 30.0%
GTTCAACATAGATAATGAAG+TGG - chr7.1:15666791-15666810 None:intergenic 30.0%
GTTCATAAAATTTACGGGAA+AGG + chr7.1:15667812-15667831 MS.gene42509:intron 30.0%
TAATGCAGTAATGCTAGAAT+CGG + chr7.1:15668780-15668799 MS.gene42509:intron 30.0%
TCAAGAATTGGTCAATAACA+AGG + chr7.1:15666624-15666643 MS.gene42509:intron 30.0%
TCTAATGGAAATATCTCACT+TGG - chr7.1:15668996-15669015 None:intergenic 30.0%
TGCAATCTAAATGTGATTGT+AGG - chr7.1:15669285-15669304 None:intergenic 30.0%
TGTTATATGATTAACAGGTG+GGG + chr7.1:15667192-15667211 MS.gene42509:intron 30.0%
TTCTTAGTAGTAAACAAGCT+TGG + chr7.1:15666933-15666952 MS.gene42509:intron 30.0%
TTGTCTATCTTCATTCTATC+TGG - chr7.1:15666420-15666439 None:intergenic 30.0%
TTGTTTGGATAATCAAGAGA+CGG - chr7.1:15667726-15667745 None:intergenic 30.0%
! AGGAAAAGGCATGTAAATAT+AGG + chr7.1:15666875-15666894 MS.gene42509:intron 30.0%
! TAGTTCCTCTAATTTTCTCT+AGG - chr7.1:15668212-15668231 None:intergenic 30.0%
! TGATAAATCCTTAAGAGTGT+TGG + chr7.1:15667557-15667576 MS.gene42509:intron 30.0%
! TTCAATATTGGTTGTAGTTG+TGG + chr7.1:15668914-15668933 MS.gene42509:CDS 30.0%
!! TATTTGTTGTAGCATTTGGA+TGG + chr7.1:15668943-15668962 MS.gene42509:CDS 30.0%
!!! TGTAGCATTTGCCTTTTTTT+GGG - chr7.1:15669348-15669367 None:intergenic 30.0%
AAATGGGGTTAAAACTCTTG+AGG - chr7.1:15666453-15666472 None:intergenic 35.0%
AACACAGAAGATTAAACCCT+GGG + chr7.1:15668062-15668081 MS.gene42509:CDS 35.0%
AAGCTCCTAGAGAAAATTAG+AGG + chr7.1:15668204-15668223 MS.gene42509:CDS 35.0%
AATGGGGTTAAAACTCTTGA+GGG - chr7.1:15666452-15666471 None:intergenic 35.0%
ACTCATATTGTGATGAACTG+AGG + chr7.1:15666958-15666977 MS.gene42509:intron 35.0%
AGAACGAGGATTAGAAGAAA+GGG + chr7.1:15668176-15668195 MS.gene42509:CDS 35.0%
AGAATCGGAACAAAAATTGC+AGG + chr7.1:15668795-15668814 MS.gene42509:intron 35.0%
AGAATGATAGTCCTAGAATC+AGG - chr7.1:15666238-15666257 None:intergenic 35.0%
AGATGTGATTGCATTTCCAT+CGG - chr7.1:15666492-15666511 None:intergenic 35.0%
ATAGTCCTAGAATCAGGAAA+AGG - chr7.1:15666232-15666251 None:intergenic 35.0%
ATATTGTGATGAACTGAGGA+AGG + chr7.1:15666962-15666981 MS.gene42509:intron 35.0%
ATTACTCTATCAGCAGGAAA+AGG + chr7.1:15666861-15666880 MS.gene42509:intron 35.0%
ATTATTCTTGGGGTCAAGTT+TGG + chr7.1:15668864-15668883 MS.gene42509:CDS 35.0%
ATTTCGGATGAATGTTGCAT+AGG - chr7.1:15666914-15666933 None:intergenic 35.0%
CATAAATGCCATCTCTTCAA+TGG - chr7.1:15669201-15669220 None:intergenic 35.0%
CATTACTGTGATGTGTTTAC+AGG - chr7.1:15669257-15669276 None:intergenic 35.0%
CTGTGTTTGTACCCAAAAAA+AGG + chr7.1:15669334-15669353 MS.gene42509:intron 35.0%
GAACAACAAATATGGTCATG+AGG - chr7.1:15669151-15669170 None:intergenic 35.0%
GAATATTCCACAAGAGATTC+TGG + chr7.1:15666170-15666189 MS.gene42509:intron 35.0%
GAATCGGAACAAAAATTGCA+GGG + chr7.1:15668796-15668815 MS.gene42509:intron 35.0%
GTCCAAAGGCTATTCAATAT+TGG + chr7.1:15668902-15668921 MS.gene42509:CDS 35.0%
TAGAACGAGGATTAGAAGAA+AGG + chr7.1:15668175-15668194 MS.gene42509:CDS 35.0%
TAGGTGATACTTGACACAAT+AGG - chr7.1:15667583-15667602 None:intergenic 35.0%
TATCACATTACTCTATCAGC+AGG + chr7.1:15666855-15666874 MS.gene42509:intron 35.0%
TATTTCCCAACTTAATGGCA+CGG - chr7.1:15668623-15668642 None:intergenic 35.0%
TCATTAACCAGAATCTCTTG+TGG - chr7.1:15666180-15666199 None:intergenic 35.0%
TGATGCAGAGTTTGAAGATA+TGG + chr7.1:15668239-15668258 MS.gene42509:CDS 35.0%
TGTTAAAATCCTTGCTGCAA+TGG + chr7.1:15666314-15666333 MS.gene42509:intron 35.0%
TGTTTGGATAATCAAGAGAC+GGG - chr7.1:15667725-15667744 None:intergenic 35.0%
TTATTCTTGGGGTCAAGTTT+GGG + chr7.1:15668865-15668884 MS.gene42509:CDS 35.0%
TTCGTAACATACTCGAAAGA+AGG + chr7.1:15668301-15668320 MS.gene42509:CDS 35.0%
TTGAAGAGATGGCATTTATG+TGG + chr7.1:15669201-15669220 MS.gene42509:CDS 35.0%
TTTCACTTTCGTAATTGCTC+AGG + chr7.1:15669061-15669080 MS.gene42509:intron 35.0%
! AAAGGGCAGAGCTTTATAAA+GGG + chr7.1:15665953-15665972 MS.gene42509:CDS 35.0%
! ACATACTCGAAAGAAGGTAT+AGG + chr7.1:15668307-15668326 MS.gene42509:CDS 35.0%
! CCATTGTTCTAAACCAGTAA+AGG - chr7.1:15667654-15667673 None:intergenic 35.0%
! CTTTCGAGTATGTTACGAAA+CGG - chr7.1:15668300-15668319 None:intergenic 35.0%
! GTTTTTGTCTGTATACAGCA+GGG - chr7.1:15667252-15667271 None:intergenic 35.0%
! TCCACTTTATTTGTCAGAGA+TGG + chr7.1:15667951-15667970 MS.gene42509:CDS 35.0%
! TTCAAGTGGCAACAACTTTT+GGG + chr7.1:15668010-15668029 MS.gene42509:CDS 35.0%
! TTTCGAGTATGTTACGAAAC+GGG - chr7.1:15668299-15668318 None:intergenic 35.0%
!! AAATTTGGGTTTTGCGGAAA+GGG + chr7.1:15666698-15666717 MS.gene42509:intron 35.0%
!! ATCATGATGGATGATTCACT+TGG - chr7.1:15666516-15666535 None:intergenic 35.0%
!! ATTGCAACAGTTGATAAGCT+GGG + chr7.1:15668501-15668520 MS.gene42509:CDS 35.0%
!! CATCACAAATTTGGGTTTTG+CGG + chr7.1:15666692-15666711 MS.gene42509:intron 35.0%
!! CATTATCAATTTGCTACCGA+TGG + chr7.1:15666473-15666492 MS.gene42509:intron 35.0%
!! CCTTTACTGGTTTAGAACAA+TGG + chr7.1:15667651-15667670 MS.gene42509:intron 35.0%
!! GTTTCATTTTTCACATGAGC+AGG + chr7.1:15668830-15668849 MS.gene42509:intron 35.0%
!! TCATGATGGATGATTCACTT+GGG - chr7.1:15666515-15666534 None:intergenic 35.0%
!! TGCCTATTTGTTGTAGCATT+TGG + chr7.1:15668939-15668958 MS.gene42509:CDS 35.0%
!! TGTTTTTGTCTGTATACAGC+AGG - chr7.1:15667253-15667272 None:intergenic 35.0%
!! TTTCAAGTGGCAACAACTTT+TGG + chr7.1:15668009-15668028 MS.gene42509:CDS 35.0%
!!! CTGTAGCATTTGCCTTTTTT+TGG - chr7.1:15669349-15669368 None:intergenic 35.0%
!!! TCACTTTTTGGCTATGATGT+TGG + chr7.1:15666027-15666046 MS.gene42509:CDS 35.0%
AACCTCACAATGCTGATCTT+CGG + chr7.1:15667466-15667485 MS.gene42509:CDS 40.0%
AAGAGATGGCATTTATGTGG+AGG + chr7.1:15669204-15669223 MS.gene42509:CDS 40.0%
AATAGCCTTTGGACAGTTCT+TGG - chr7.1:15668896-15668915 None:intergenic 40.0%
AATCAGGGATGCAACTAAAC+CGG - chr7.1:15667350-15667369 None:intergenic 40.0%
ACAATAGGCCAACACTCTTA+AGG - chr7.1:15667568-15667587 None:intergenic 40.0%
ACACAGAAGATTAAACCCTG+GGG + chr7.1:15668063-15668082 MS.gene42509:CDS 40.0%
ACCTCTTCTCTATACATTGC+CGG + chr7.1:15667328-15667347 MS.gene42509:CDS 40.0%
ACGTCCATACTTCCTTGTAA+TGG - chr7.1:15667380-15667399 None:intergenic 40.0%
AGAGTTCTTCTTATCAGTGG+TGG + chr7.1:15668528-15668547 MS.gene42509:CDS 40.0%
AGGAGAGTTCTTCTTATCAG+TGG + chr7.1:15668525-15668544 MS.gene42509:CDS 40.0%
AGGTATTCCCATTGAAGAGA+TGG + chr7.1:15669190-15669209 MS.gene42509:CDS 40.0%
ATTGTCAATTGTTGGCGACA+TGG + chr7.1:15666653-15666672 MS.gene42509:intron 40.0%
CAGCTTATCAACTGTTGCAA+TGG - chr7.1:15668502-15668521 None:intergenic 40.0%
CATTAGAAATCCGTTCAGCA+GGG + chr7.1:15669009-15669028 MS.gene42509:CDS 40.0%
CCAACTTCACAAATCTTGAC+TGG + chr7.1:15668357-15668376 MS.gene42509:CDS 40.0%
CCAGTCAAGATTTGTGAAGT+TGG - chr7.1:15668360-15668379 None:intergenic 40.0%
CCTCGTTCTATTAAGCTGTT+CGG - chr7.1:15668165-15668184 None:intergenic 40.0%
CGCAAAACCCAAATTTGTGA+TGG - chr7.1:15666694-15666713 None:intergenic 40.0%
CGTCCATACTTCCTTGTAAT+GGG - chr7.1:15667379-15667398 None:intergenic 40.0%
CTCTTCAATGGGAATACCTT+TGG - chr7.1:15669189-15669208 None:intergenic 40.0%
CTGTTTCAAAGCATGGGATT+CGG + chr7.1:15668411-15668430 MS.gene42509:CDS 40.0%
GAACACAGAAGATTAAACCC+TGG + chr7.1:15668061-15668080 MS.gene42509:CDS 40.0%
GAACGAGGATTAGAAGAAAG+GGG + chr7.1:15668177-15668196 MS.gene42509:CDS 40.0%
GATAACCAAGAACTGTCCAA+AGG + chr7.1:15668888-15668907 MS.gene42509:CDS 40.0%
GATTCAGAATGCTAAGGTGA+TGG - chr7.1:15666813-15666832 None:intergenic 40.0%
GCCATCTCTGACAAATAAAG+TGG - chr7.1:15667955-15667974 None:intergenic 40.0%
GGCTATGATGTTGGAATTTC+AGG + chr7.1:15666036-15666055 MS.gene42509:CDS 40.0%
GGGACTCTATTGTCAATTGT+TGG + chr7.1:15666645-15666664 MS.gene42509:intron 40.0%
TAATCTCAATTCAGGACTCG+AGG + chr7.1:15666601-15666620 MS.gene42509:intron 40.0%
TATTAAGCTGTTCGGAGTCT+CGG - chr7.1:15668157-15668176 None:intergenic 40.0%
TATTCTTGGGGTCAAGTTTG+GGG + chr7.1:15668866-15668885 MS.gene42509:CDS 40.0%
TCTCCCATTACAAGGAAGTA+TGG + chr7.1:15667373-15667392 MS.gene42509:CDS 40.0%
TGATTGCATCTCCCATTACA+AGG + chr7.1:15667365-15667384 MS.gene42509:CDS 40.0%
TTCCATTCTCTTCTATGCTC+CGG + chr7.1:15668386-15668405 MS.gene42509:CDS 40.0%
TTCTTCAAGGAAGTCATCCA+TGG - chr7.1:15667224-15667243 None:intergenic 40.0%
TTGTCAATTGTTGGCGACAT+GGG + chr7.1:15666654-15666673 MS.gene42509:intron 40.0%
! AAAGATCCGTGCCATTAAGT+TGG + chr7.1:15668614-15668633 MS.gene42509:intron 40.0%
! AAGATCCGTGCCATTAAGTT+GGG + chr7.1:15668615-15668634 MS.gene42509:intron 40.0%
! ATGGGAATACCTTTGGTTTC+AGG - chr7.1:15669182-15669201 None:intergenic 40.0%
! CATTTATGTGGAGGAAGCAT+TGG + chr7.1:15669213-15669232 MS.gene42509:CDS 40.0%
! CTTCTCTGCTCATTCAAGTT+TGG + chr7.1:15669095-15669114 MS.gene42509:CDS 40.0%
! GAAAGGGCAGAGCTTTATAA+AGG + chr7.1:15665952-15665971 MS.gene42509:CDS 40.0%
! TATGGTTGATGCAAGCAAGT+TGG + chr7.1:15668257-15668276 MS.gene42509:CDS 40.0%
! TGGCATTGGATTTGGAAATC+AGG + chr7.1:15667507-15667526 MS.gene42509:CDS 40.0%
! TGTAATGGGAGATGCAATCA+GGG - chr7.1:15667365-15667384 None:intergenic 40.0%
! TGTTGTTTACCATTGCAGCA+AGG - chr7.1:15666326-15666345 None:intergenic 40.0%
! TTACAAGGAAGTATGGACGT+CGG + chr7.1:15667380-15667399 MS.gene42509:CDS 40.0%
! TTGTAATGGGAGATGCAATC+AGG - chr7.1:15667366-15667385 None:intergenic 40.0%
!! CAAATTTGGGTTTTGCGGAA+AGG + chr7.1:15666697-15666716 MS.gene42509:intron 40.0%
!! CATTGCAACAGTTGATAAGC+TGG + chr7.1:15668500-15668519 MS.gene42509:CDS 40.0%
!! GGAATCTTTCTCTTTTTCGC+CGG + chr7.1:15669116-15669135 MS.gene42509:CDS 40.0%
!!! TCAAGAGACGGGTTTTAAGA+AGG - chr7.1:15667714-15667733 None:intergenic 40.0%
ACAATTGCCATCACCAACTC+TGG - chr7.1:15668333-15668352 None:intergenic 45.0%
ACCGGCAATGTATAGAGAAG+AGG - chr7.1:15667332-15667351 None:intergenic 45.0%
AGAAGATTAAACCCTGGGGA+TGG + chr7.1:15668067-15668086 MS.gene42509:CDS 45.0%
AGCACACGACAACAGAGATT+GGG + chr7.1:15666394-15666413 MS.gene42509:intron 45.0%
AGTCAACCATCCGTCATGAT+AGG + chr7.1:15666738-15666757 MS.gene42509:intron 45.0%
ATTAAGCTGTTCGGAGTCTC+GGG - chr7.1:15668156-15668175 None:intergenic 45.0%
CAGCAGGGAAGAATTCTTCA+AGG - chr7.1:15667237-15667256 None:intergenic 45.0%
CCATTAGAAATCCGTTCAGC+AGG + chr7.1:15669008-15669027 MS.gene42509:CDS 45.0%
CCGAACAGCTTAATAGAACG+AGG + chr7.1:15668162-15668181 MS.gene42509:CDS 45.0%
CCTATCGTCATCAAAAGAGC+CGG - chr7.1:15668120-15668139 None:intergenic 45.0%
CTGTTCTTGCCTGAAACCAA+AGG + chr7.1:15669170-15669189 MS.gene42509:CDS 45.0%
CTTGCATTGTTGCAGCTACA+GGG + chr7.1:15666001-15666020 MS.gene42509:CDS 45.0%
GAGGATTAGAAGAAAGGGGA+AGG + chr7.1:15668181-15668200 MS.gene42509:CDS 45.0%
GGTGGTAGTAGCTTTCTGAT+TGG + chr7.1:15667418-15667437 MS.gene42509:CDS 45.0%
TACTGCAAGTACGACAACCA+GGG + chr7.1:15667292-15667311 MS.gene42509:CDS 45.0%
TATAAAGCTCTGCCCTTTCC+TGG - chr7.1:15665951-15665970 None:intergenic 45.0%
TGAATGAGCAGAGAAGAGCA+AGG - chr7.1:15669091-15669110 None:intergenic 45.0%
TGGGTCTTTAACAACAGGTG+TGG + chr7.1:15665921-15665940 MS.gene42509:CDS 45.0%
TGTAGCATTTGGATGGTCGT+GGG + chr7.1:15668950-15668969 MS.gene42509:CDS 45.0%
TTACTGCAAGTACGACAACC+AGG + chr7.1:15667291-15667310 MS.gene42509:CDS 45.0%
TTGCATTGTTGCAGCTACAG+GGG + chr7.1:15666002-15666021 MS.gene42509:CDS 45.0%
TTGTAGCATTTGGATGGTCG+TGG + chr7.1:15668949-15668968 MS.gene42509:CDS 45.0%
TTTCAAAGCATGGGATTCGG+TGG + chr7.1:15668414-15668433 MS.gene42509:CDS 45.0%
! AAGAAGGTATAGGCCAGAGT+TGG + chr7.1:15668317-15668336 MS.gene42509:CDS 45.0%
! AGGCTCCTTTTCCTGATTCT+AGG + chr7.1:15666224-15666243 MS.gene42509:intron 45.0%
! CCTGCTGAACGGATTTCTAA+TGG - chr7.1:15669011-15669030 None:intergenic 45.0%
! TACAAGGAAGTATGGACGTC+GGG + chr7.1:15667381-15667400 MS.gene42509:CDS 45.0%
! TGCCTTCAAAAGAAGCACGA+GGG - chr7.1:15667929-15667948 None:intergenic 45.0%
! TGTCGTGTGCTGATAATAGC+CGG - chr7.1:15666385-15666404 None:intergenic 45.0%
! TTCCCTCGTGCTTCTTTTGA+AGG + chr7.1:15667924-15667943 MS.gene42509:intron 45.0%
! TTGCCTTCAAAAGAAGCACG+AGG - chr7.1:15667930-15667949 None:intergenic 45.0%
!! ATGACGGATGGTTGACTAAG+GGG - chr7.1:15666735-15666754 None:intergenic 45.0%
!! CAACAGTTGATAAGCTGGGA+AGG + chr7.1:15668505-15668524 MS.gene42509:CDS 45.0%
!! CATGACGGATGGTTGACTAA+GGG - chr7.1:15666736-15666755 None:intergenic 45.0%
!! TCATGACGGATGGTTGACTA+AGG - chr7.1:15666737-15666756 None:intergenic 45.0%
!!! GCTCTTTTGATGACGATAGG+AGG + chr7.1:15668120-15668139 MS.gene42509:CDS 45.0%
AACAACAGGTGTGGTAGACC+AGG + chr7.1:15665930-15665949 MS.gene42509:CDS 50.0%
AACCATCCGTCATGATAGGC+AGG + chr7.1:15666742-15666761 MS.gene42509:intron 50.0%
ACCATCCGTCATGATAGGCA+GGG + chr7.1:15666743-15666762 MS.gene42509:intron 50.0%
AGATTAAACCCTGGGGATGG+AGG + chr7.1:15668070-15668089 MS.gene42509:CDS 50.0%
AGGTGTGGTAGACCAGGAAA+GGG + chr7.1:15665936-15665955 MS.gene42509:CDS 50.0%
ATCTTCGGCCGTGTTATGCT+CGG + chr7.1:15667481-15667500 MS.gene42509:CDS 50.0%
CACCGGAGCATAGAAGAGAA+TGG - chr7.1:15668391-15668410 None:intergenic 50.0%
CAGCACACGACAACAGAGAT+TGG + chr7.1:15666393-15666412 MS.gene42509:intron 50.0%
CAGGACTCGAGGTCAAGAAT+TGG + chr7.1:15666612-15666631 MS.gene42509:intron 50.0%
CGTCATCAAAAGAGCCGGTA+CGG - chr7.1:15668115-15668134 None:intergenic 50.0%
GAGAAGAGGTAAATGCCGCA+AGG - chr7.1:15667318-15667337 None:intergenic 50.0%
GCTTGCATTGTTGCAGCTAC+AGG + chr7.1:15666000-15666019 MS.gene42509:CDS 50.0%
GGAATCCCTGCCTATCATGA+CGG - chr7.1:15666751-15666770 None:intergenic 50.0%
GTAGCATTTGGATGGTCGTG+GGG + chr7.1:15668951-15668970 MS.gene42509:CDS 50.0%
TCATGTTCAATCCTCCTCGC+AGG - chr7.1:15667987-15668006 None:intergenic 50.0%
TGATACTCTGCCCTGCTGAA+CGG - chr7.1:15669022-15669041 None:intergenic 50.0%
TGCATTGTTGCAGCTACAGG+GGG + chr7.1:15666003-15666022 MS.gene42509:CDS 50.0%
TGCCAATGCCGAGCATAACA+CGG - chr7.1:15667492-15667511 None:intergenic 50.0%
TTGGAACCGTCCAACCAAGT+GGG - chr7.1:15668977-15668996 None:intergenic 50.0%
! GCTGGTGGGTCTTTAACAAC+AGG + chr7.1:15665916-15665935 MS.gene42509:CDS 50.0%
!! CCCATGCTTTGAAACAGCAC+CGG - chr7.1:15668408-15668427 None:intergenic 50.0%
!! CCGGTGCTGTTTCAAAGCAT+GGG + chr7.1:15668405-15668424 MS.gene42509:CDS 50.0%
!! CTCGGCATTGGCATTGGATT+TGG + chr7.1:15667499-15667518 MS.gene42509:CDS 50.0%
!! GCTACAGGGGGATCACTTTT+TGG + chr7.1:15666015-15666034 MS.gene42509:CDS 50.0%
!! GTATAGGCCAGAGTTGGTGA+TGG + chr7.1:15668323-15668342 MS.gene42509:CDS 50.0%
!! GTTATGCTCGGCATTGGCAT+TGG + chr7.1:15667493-15667512 MS.gene42509:CDS 50.0%
!! TCCGGTGCTGTTTCAAAGCA+TGG + chr7.1:15668404-15668423 MS.gene42509:CDS 50.0%
!! TCTTTCTCTTTTTCGCCGGC+TGG + chr7.1:15669120-15669139 MS.gene42509:CDS 50.0%
!! TGTGGAGGAAGCATTGGTTC+TGG + chr7.1:15669219-15669238 MS.gene42509:CDS 50.0%
!!! CCGGCTCTTTTGATGACGAT+AGG + chr7.1:15668117-15668136 MS.gene42509:CDS 50.0%
AACAGGTGGGGTGACATCCA+TGG + chr7.1:15667204-15667223 MS.gene42509:intron 55.0%
AGACGCTTCGCTCTACTCCT+CGG + chr7.1:15668437-15668456 MS.gene42509:CDS 55.0%
CAGGTGTGGTAGACCAGGAA+AGG + chr7.1:15665935-15665954 MS.gene42509:CDS 55.0%
CGGGCAAGTATCATCACTGG+TGG + chr7.1:15667400-15667419 MS.gene42509:CDS 55.0%
CGTCGGGCAAGTATCATCAC+TGG + chr7.1:15667397-15667416 MS.gene42509:CDS 55.0%
CTTGGAACCGTCCAACCAAG+TGG - chr7.1:15668978-15668997 None:intergenic 55.0%
GGCCGAAGATCAGCATTGTG+AGG - chr7.1:15667471-15667490 None:intergenic 55.0%
GGTCATGAGGGTAATCCAGC+CGG - chr7.1:15669138-15669157 None:intergenic 55.0%
GTTCAATCCTCCTCGCAGGT+GGG - chr7.1:15667983-15668002 None:intergenic 55.0%
TGTTCAATCCTCCTCGCAGG+TGG - chr7.1:15667984-15668003 None:intergenic 55.0%
! CTCTACTCCTCGGCTTTGAC+TGG + chr7.1:15668447-15668466 MS.gene42509:CDS 55.0%
! TACTCCTCGGCTTTGACTGG+TGG + chr7.1:15668450-15668469 MS.gene42509:CDS 55.0%
! TCCCTGCCTATCATGACGGA+TGG - chr7.1:15666747-15666766 None:intergenic 55.0%
AACGCCACCAGTCAAAGCCG+AGG - chr7.1:15668457-15668476 None:intergenic 60.0%
AATCCTCCTCGCAGGTGGGT+TGG - chr7.1:15667979-15667998 None:intergenic 60.0%
AGGTAAATGCCGCAAGGCCC+TGG - chr7.1:15667312-15667331 None:intergenic 60.0%
ATGGAGGCTGTCCCTAGGCT+TGG + chr7.1:15668086-15668105 MS.gene42509:CDS 60.0%
GGCCGTGTTATGCTCGGCAT+TGG + chr7.1:15667487-15667506 MS.gene42509:CDS 60.0%
GTACGACAACCAGGGCCTTG+CGG + chr7.1:15667300-15667319 MS.gene42509:CDS 60.0%
AGGGACAGCCTCCATCCCCA+GGG - chr7.1:15668081-15668100 None:intergenic 65.0%
ATGGCACCAACCCACCTGCG+AGG + chr7.1:15667970-15667989 MS.gene42509:CDS 65.0%
CCTAGGCTTGGCTGCCGTAC+CGG + chr7.1:15668098-15668117 MS.gene42509:CDS 65.0%
CGGTACGGCAGCCAAGCCTA+GGG - chr7.1:15668100-15668119 None:intergenic 65.0%
GTGGGGCCCACTTGGTTGGA+CGG + chr7.1:15668968-15668987 MS.gene42509:CDS 65.0%
TAGGGACAGCCTCCATCCCC+AGG - chr7.1:15668082-15668101 None:intergenic 65.0%
TGGGGATGGAGGCTGTCCCT+AGG + chr7.1:15668081-15668100 MS.gene42509:CDS 65.0%
CCGGTACGGCAGCCAAGCCT+AGG - chr7.1:15668101-15668120 None:intergenic 70.0%
GCACCAACCCACCTGCGAGG+AGG + chr7.1:15667973-15667992 MS.gene42509:CDS 70.0%
GGATGGTCGTGGGGCCCACT+TGG + chr7.1:15668960-15668979 MS.gene42509:CDS 70.0%
GGTCGTGGGGCCCACTTGGT+TGG + chr7.1:15668964-15668983 MS.gene42509:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 15665913 15669383 15665913 ID=MS.gene42509
chr7.1 mRNA 15665913 15669383 15665913 ID=MS.gene42509.t1;Parent=MS.gene42509
chr7.1 exon 15665913 15666057 15665913 ID=MS.gene42509.t1.exon1;Parent=MS.gene42509.t1
chr7.1 CDS 15665913 15666057 15665913 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
chr7.1 exon 15667209 15667528 15667209 ID=MS.gene42509.t1.exon2;Parent=MS.gene42509.t1
chr7.1 CDS 15667209 15667528 15667209 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
chr7.1 exon 15667946 15668572 15667946 ID=MS.gene42509.t1.exon3;Parent=MS.gene42509.t1
chr7.1 CDS 15667946 15668572 15667946 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
chr7.1 exon 15668852 15669049 15668852 ID=MS.gene42509.t1.exon4;Parent=MS.gene42509.t1
chr7.1 CDS 15668852 15669049 15668852 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
chr7.1 exon 15669083 15669270 15669083 ID=MS.gene42509.t1.exon5;Parent=MS.gene42509.t1
chr7.1 CDS 15669083 15669270 15669083 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
chr7.1 exon 15669356 15669383 15669356 ID=MS.gene42509.t1.exon6;Parent=MS.gene42509.t1
chr7.1 CDS 15669356 15669383 15669356 ID=cds.MS.gene42509.t1;Parent=MS.gene42509.t1
Gene Sequence

>MS.gene42509

ATGGCTGGTGGGTCTTTAACAACAGGTGTGGTAGACCAGGAAAGGGCAGAGCTTTATAAAGGGAAAGTTACTTGGTATGTTATCATTGCTTGCATTGTTGCAGCTACAGGGGGATCACTTTTTGGCTATGATGTTGGAATTTCAGGTTCTTCCTTAATTCATTATTTGAATCTTAAGTTTTTGTGTTTTTCTGTTTTCAATGTTTTTCAGGCTATTTCATTTCATTATATATTTTTCTTATAAATTTTGCATGAGTTGAATATTCCACAAGAGATTCTGGTTAATGAATTTTTAAACACAATTTGTTGATAAGGCTCCTTTTCCTGATTCTAGGACTATCATTCTTAATTATTTTCTCAAACAGTAAAATTTTAAACTATTCTGGCTTTGTCTTCTAAACATGTTAAAATCCTTGCTGCAATGGTAAACAACAAATTTTTTACCTCTTTCTTCAATTTTTTGGTGTAAACCGGCTATTATCAGCACACGACAACAGAGATTGGGCCAGATAGAATGAAGATAGACAACAAATCTTTCCCTCAAGAGTTTTAACCCCATTTCATTATCAATTTGCTACCGATGGAAATGCAATCACATCTCCCAAGTGAATCATCCATCATGATAGAATGTCTTATTGAATGTCATGTTTCTAATTGTCGTCTCCCCAAAGCTTAATTCACAATATTTTTAATCTCAATTCAGGACTCGAGGTCAAGAATTGGTCAATAACAAGGGACTCTATTGTCAATTGTTGGCGACATGGGATATGATTGTATTTCCATCACAAATTTGGGTTTTGCGGAAAGGGAAGAGCTTATTCCCCTTAGTCAACCATCCGTCATGATAGGCAGGGATTCCTTCAGATCATATATTAACCACTTCATTATCTATGTTGAACCATCACCTTAGCATTCTGAATCACAAATATTTAAGAAAACGTAGTATCACATTACTCTATCAGCAGGAAAAGGCATGTAAATATAGGAATGCTGCATCGTCCTATGCAACATTCATCCGAAATTCTTAGTAGTAAACAAGCTTGGCAACTCATATTGTGATGAACTGAGGAAGGAGAAAACTGTTTCCTCGTAGATTTAGTAATAGAAATATTAAAGATATATTTAGGTTATCTTAGAATATCTTTCTTGATTTGTTTCCTTATTTCAATAACTTTTAGTCTTAATGTAGTTGGTTGAGATGTTGATGAACCTTGCATCAATTTCATTATTTGTTAGTCTTTTTTTTTTTTTTTTTTGTGTTCATATTTTTTTCTGATGCATGTTATATGATTAACAGGTGGGGTGACATCCATGGATGACTTCCTTGAAGAATTCTTCCCTGCTGTATACAGACAAAAACAGCATGCACATGAAAACAATTACTGCAAGTACGACAACCAGGGCCTTGCGGCATTTACCTCTTCTCTATACATTGCCGGTTTAGTTGCATCCCTGATTGCATCTCCCATTACAAGGAAGTATGGACGTCGGGCAAGTATCATCACTGGTGGTAGTAGCTTTCTGATTGGATCAGCTCTGAATGCTTCAGCTGTTAACCTCACAATGCTGATCTTCGGCCGTGTTATGCTCGGCATTGGCATTGGATTTGGAAATCAGGTAATAACATATTTCTCTAATCTATCTATGATAAATCCTTAAGAGTGTTGGCCTATTGTGTCAAGTATCACCTACCTATGATGAATTCATGATCAATACTTAGCAGATAGAAACATTTTTTTCCTTTACTGGTTTAGAACAATGGTAATTTTTTCTATGAAAGGAGGAAACTAATTTTGTTTCCTTCTTAAAACCCGTCTCTTGATTATCCAAACAAGTATCAAACAGTTTGAAGGGTGTTAAGTGTTAATTGTTAATAATAACAGCGTAAATGTTAATTTTAGTTCATAAAATTTACGGGAAAGGAAAGATAGTAATGTGATGGAAACAATTTATGTTTGAGTTAGAAGACAAATCGAGTTATACCTCAAAAGTTGACAAATTATTTGAGCTATTTCCCTCGTGCTTCTTTTGAAGGCAATTCCACTTTATTTGTCAGAGATGGCACCAACCCACCTGCGAGGAGGATTGAACATGATGTTTCAAGTGGCAACAACTTTTGGGATTTTCATAGCCAATATGATAAATTTTGGAACACAGAAGATTAAACCCTGGGGATGGAGGCTGTCCCTAGGCTTGGCTGCCGTACCGGCTCTTTTGATGACGATAGGAGGAATATTTCTTCCCGAGACTCCGAACAGCTTAATAGAACGAGGATTAGAAGAAAGGGGAAGGAAGCTCCTAGAGAAAATTAGAGGAACTAGCGATGTTGATGCAGAGTTTGAAGATATGGTTGATGCAAGCAAGTTGGCAAACTCAATAAAGCACCCGTTTCGTAACATACTCGAAAGAAGGTATAGGCCAGAGTTGGTGATGGCAATTGTCATGCCAACTTCACAAATCTTGACTGGCATTAATTCCATTCTCTTCTATGCTCCGGTGCTGTTTCAAAGCATGGGATTCGGTGGAGACGCTTCGCTCTACTCCTCGGCTTTGACTGGTGGCGTTCTTGCTTGCTCAACATTCATCTCCATTGCAACAGTTGATAAGCTGGGAAGGAGAGTTCTTCTTATCAGTGGTGGAATACAAATGATCATATGTCAGGTATGAAAAAATCTGTCTTAAACAAATTCTGATCATGTTTAAAAGATCCGTGCCATTAAGTTGGGAAATAATTCTAATCAACAGCTTAGAATACATACATTAAAATAATAGGAAAAAGGCAATAAGGTTTTCTTATAGTTATTTCATTATTCTTACTTACCCTCTATTTAGTTGTAATAAAAAACTATGTTCATACATGAATTAGTCTAATGCAGTAATGCTAGAATCGGAACAAAAATTGCAGGGTAACTTATTTTGTTTCATTTTTCACATGAGCAGGTTATAGTTGCAATTATTCTTGGGGTCAAGTTTGGGGATAACCAAGAACTGTCCAAAGGCTATTCAATATTGGTTGTAGTTGTGGTTTGCCTATTTGTTGTAGCATTTGGATGGTCGTGGGGCCCACTTGGTTGGACGGTTCCAAGTGAGATATTTCCATTAGAAATCCGTTCAGCAGGGCAGAGTATCACAGTATCTGTAAACCTTTTTTTCACTTTCGTAATTGCTCAGGCATTCCTTGCTCTTCTCTGCTCATTCAAGTTTGGAATCTTTCTCTTTTTCGCCGGCTGGATTACCCTCATGACCATATTTGTTGTTCTGTTCTTGCCTGAAACCAAAGGTATTCCCATTGAAGAGATGGCATTTATGTGGAGGAAGCATTGGTTCTGGAAATCTATATTGCCTGTAAACACATCACAGTAATGCAATTCCTACAATCACATTTAGATTGCAGTAATAAATTACATAAATAAAAAATACTACTGTGTTTGTACCCAAAAAAAGGCAAATGCTACAGTATCAATTTGCTTAA
Protein sequence

>MS.gene42509.t1

MAGGSLTTGVVDQERAELYKGKVTWYVIIACIVAATGGSLFGYDVGISGGVTSMDDFLEEFFPAVYRQKQHAHENNYCKYDNQGLAAFTSSLYIAGLVASLIASPITRKYGRRASIITGGSSFLIGSALNASAVNLTMLIFGRVMLGIGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFIANMINFGTQKIKPWGWRLSLGLAAVPALLMTIGGIFLPETPNSLIERGLEERGRKLLEKIRGTSDVDAEFEDMVDASKLANSIKHPFRNILERRYRPELVMAIVMPTSQILTGINSILFYAPVLFQSMGFGGDASLYSSALTGGVLACSTFISIATVDKLGRRVLLISGGIQMIICQVIVAIILGVKFGDNQELSKGYSILVVVVVCLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVSAFLALLCSFKFGIFLFFAGWITLMTIFVVLFLPETKGIPIEEMAFMWRKHWFWKSILPVNTSQQMLQYQFA