AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42511

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42511.t1 MTR_7g091690 98.169 437 8 0 14 450 68 504 0.0 875
MS.gene42511.t1 MTR_5g094760 92.449 437 33 0 14 450 68 504 0.0 811
MS.gene42511.t1 MTR_0204s0020 84.988 433 65 0 13 445 61 493 0.0 766
MS.gene42511.t1 MTR_0204s0020 84.988 433 65 0 13 445 58 490 0.0 766
MS.gene42511.t1 MTR_4g116770 81.250 432 81 0 14 445 266 697 0.0 734
MS.gene42511.t1 MTR_0204s0040 81.062 433 82 0 13 445 69 501 0.0 733
MS.gene42511.t1 MTR_4g116790 81.236 437 82 0 14 450 68 504 0.0 731
MS.gene42511.t1 MTR_3g008160 58.810 437 178 2 10 444 12 448 0.0 548
MS.gene42511.t1 MTR_3g008160 58.810 437 178 2 10 444 61 497 0.0 547
MS.gene42511.t1 MTR_5g006070 57.604 434 181 3 20 450 23 456 0.0 543
MS.gene42511.t1 MTR_5g006070 57.604 434 181 3 20 450 71 504 0.0 543
MS.gene42511.t1 MTR_6g087040 58.257 436 181 1 10 444 64 499 0.0 538
MS.gene42511.t1 MTR_6g088375 58.257 436 181 1 10 444 64 499 0.0 538
MS.gene42511.t1 MTR_1g104770 56.492 439 187 4 10 444 61 499 0.0 533
MS.gene42511.t1 MTR_8g102860 57.955 440 182 2 14 450 66 505 0.0 530
MS.gene42511.t1 MTR_8g102860 57.955 440 182 2 14 450 14 453 0.0 530
MS.gene42511.t1 MTR_1g104750 55.251 438 193 3 10 444 61 498 0.0 522
MS.gene42511.t1 MTR_1g104780 57.208 437 184 3 8 441 59 495 2.53e-180 514
MS.gene42511.t1 MTR_4g116790 79.866 298 60 0 14 311 68 365 3.93e-178 503
MS.gene42511.t1 MTR_3g008170 55.023 438 194 3 10 444 61 498 5.13e-176 503
MS.gene42511.t1 MTR_5g082540 55.452 431 189 2 14 442 66 495 1.67e-172 494
MS.gene42511.t1 MTR_3g093010 56.643 429 182 2 20 444 71 499 1.78e-170 489
MS.gene42511.t1 MTR_1g038630 54.839 434 192 3 10 440 61 493 5.40e-169 485
MS.gene42511.t1 MTR_0009s0370 54.839 434 192 2 21 450 71 504 1.75e-168 484
MS.gene42511.t1 MTR_5g041550 55.102 441 194 2 8 444 60 500 4.38e-168 483
MS.gene42511.t1 MTR_3g093060 55.896 424 183 2 21 440 25 448 2.90e-165 473
MS.gene42511.t1 MTR_3g007910 52.914 429 180 3 20 444 57 467 1.56e-160 462
MS.gene42511.t1 MTR_4g091370 55.632 435 189 2 10 440 61 495 6.33e-160 462
MS.gene42511.t1 MTR_1g038600 55.556 405 177 2 43 445 77 480 6.46e-158 456
MS.gene42511.t1 MTR_3g074390 51.620 432 204 4 14 441 69 499 5.45e-157 454
MS.gene42511.t1 MTR_3g023480 51.364 440 206 3 17 450 67 504 8.60e-157 454
MS.gene42511.t1 MTR_3g074410 51.887 424 199 4 21 440 73 495 2.36e-154 447
MS.gene42511.t1 MTR_4g090600 56.009 441 190 2 4 440 55 495 1.16e-153 446
MS.gene42511.t1 MTR_3g074270 50.698 430 192 3 13 441 63 473 1.38e-147 429
MS.gene42511.t1 MTR_3g074370 48.113 318 160 4 137 450 20 336 1.57e-107 322
MS.gene42511.t1 MTR_3g074320 49.191 309 152 4 137 441 20 327 7.98e-107 320
MS.gene42511.t1 MTR_3g074340 49.191 309 152 4 137 441 20 327 1.17e-106 320
MS.gene42511.t1 MTR_3g074380 52.000 300 141 3 14 311 67 365 2.73e-98 299
MS.gene42511.t1 MTR_3g074400 39.535 430 207 9 21 428 22 420 4.54e-89 278
MS.gene42511.t1 MTR_6g088450 32.587 402 251 11 38 424 104 500 1.65e-54 190
MS.gene42511.t1 MTR_4g069500 28.571 420 277 7 40 438 28 445 7.40e-48 171
MS.gene42511.t1 MTR_8g103500 29.976 417 265 8 37 434 63 471 1.61e-47 171
MS.gene42511.t1 MTR_4g069500 28.571 420 277 7 40 438 78 495 1.63e-47 171
MS.gene42511.t1 MTR_4g072030 29.257 417 269 8 44 436 79 493 2.48e-46 168
MS.gene42511.t1 MTR_3g084110 27.877 391 274 5 52 437 91 478 2.81e-46 167
MS.gene42511.t1 MTR_1g116650 29.426 401 252 9 52 442 141 520 2.17e-45 166
MS.gene42511.t1 MTR_7g005910 27.068 399 276 7 52 442 96 487 7.67e-44 160
MS.gene42511.t1 MTR_3g116240 29.227 414 262 9 43 430 79 487 3.04e-43 159
MS.gene42511.t1 MTR_1g038620 46.203 158 68 1 152 309 50 190 1.66e-42 149
MS.gene42511.t1 MTR_1g022315 28.894 398 270 5 43 435 1 390 1.92e-42 154
MS.gene42511.t1 MTR_1g116660 27.569 399 265 10 52 437 98 485 2.77e-42 156
MS.gene42511.t1 MTR_1g022315 28.678 401 273 5 40 435 97 489 4.68e-42 155
MS.gene42511.t1 MTR_8g077890 29.767 430 275 10 38 443 65 491 1.12e-41 155
MS.gene42511.t1 MTR_5g075300 28.132 423 279 8 38 437 65 485 2.13e-41 154
MS.gene42511.t1 MTR_8g077310 28.241 432 291 8 11 435 67 486 6.31e-41 152
MS.gene42511.t1 MTR_4g077740 31.010 416 252 11 35 430 96 496 9.31e-41 152
MS.gene42511.t1 MTR_6g018790 28.738 428 286 7 6 430 127 538 1.98e-40 152
MS.gene42511.t1 MTR_8g077310 28.750 400 267 7 43 435 1 389 1.74e-39 146
MS.gene42511.t1 MTR_2g013310 26.585 410 284 8 38 436 26 429 2.20e-39 147
MS.gene42511.t1 MTR_2g013310 26.585 410 284 8 38 436 99 502 3.85e-39 148
MS.gene42511.t1 MTR_5g077580 25.806 496 267 11 32 437 69 553 8.26e-39 148
MS.gene42511.t1 MTR_7g082270 27.336 428 292 7 6 430 87 498 2.11e-38 145
MS.gene42511.t1 MTR_2g049020 32.313 294 185 4 33 316 70 359 6.00e-38 145
MS.gene42511.t1 MTR_7g446340 25.243 412 289 7 38 437 101 505 1.43e-37 144
MS.gene42511.t1 MTR_6g007340 25.243 412 289 7 38 437 101 505 1.43e-37 144
MS.gene42511.t1 MTR_5g096000 52.174 138 65 1 307 444 162 298 2.95e-37 138
MS.gene42511.t1 MTR_5g096000 54.717 106 48 0 34 139 65 170 7.09e-28 113
MS.gene42511.t1 MTR_8g077300 28.148 405 271 8 34 430 81 473 1.80e-36 140
MS.gene42511.t1 MTR_2g048720 34.661 251 159 4 52 298 89 338 1.21e-35 139
MS.gene42511.t1 MTR_5g020270 27.483 433 293 9 11 435 70 489 3.02e-35 137
MS.gene42511.t1 MTR_5g020270 26.884 398 277 6 43 435 1 389 4.90e-35 134
MS.gene42511.t1 MTR_6g087910 27.551 392 268 7 43 430 103 482 3.57e-34 134
MS.gene42511.t1 MTR_7g094450 26.119 402 278 6 34 430 82 469 1.56e-33 132
MS.gene42511.t1 MTR_7g113960 27.778 414 269 11 28 430 60 454 2.27e-33 131
MS.gene42511.t1 MTR_3g080240 26.471 408 285 9 28 430 130 527 2.64e-33 132
MS.gene42511.t1 MTR_7g082270 26.810 373 259 5 6 378 87 445 3.31e-33 130
MS.gene42511.t1 MTR_7g113970 26.683 401 277 9 34 430 104 491 8.62e-32 127
MS.gene42511.t1 MTR_4g118610 27.228 404 272 8 34 430 94 482 8.71e-32 127
MS.gene42511.t1 MTR_2g020710 27.913 412 259 13 34 430 2 390 1.60e-31 125
MS.gene42511.t1 MTR_2g020710 27.913 412 259 13 34 430 91 479 2.82e-31 125
MS.gene42511.t1 MTR_2g026160 29.492 295 191 5 52 333 90 380 3.15e-31 126
MS.gene42511.t1 MTR_7g094110 26.065 399 282 6 34 430 84 471 2.64e-30 122
MS.gene42511.t1 MTR_5g020270 25.635 433 280 10 11 435 70 468 2.10e-29 120
MS.gene42511.t1 MTR_4g013205 25.131 382 272 5 52 430 98 468 2.29e-29 120
MS.gene42511.t1 MTR_5g019870 26.950 423 279 11 41 437 64 482 1.26e-28 118
MS.gene42511.t1 MTR_4g069500 27.451 306 200 6 153 438 3 306 2.77e-28 114
MS.gene42511.t1 MTR_8g077310 27.647 340 230 7 11 346 67 394 6.88e-28 115
MS.gene42511.t1 MTR_1g114280 35.443 158 81 3 295 450 21 159 3.11e-26 104
MS.gene42511.t1 MTR_4g064820 32.168 286 173 8 35 302 147 429 4.00e-25 108
MS.gene42511.t1 MTR_0064s0040 47.573 103 53 1 13 115 53 154 3.56e-24 98.6
MS.gene42511.t1 MTR_7g094110 25.063 399 266 7 34 430 84 451 9.80e-24 103
MS.gene42511.t1 MTR_2g026140 28.626 262 158 7 52 300 87 332 3.02e-23 102
MS.gene42511.t1 MTR_3g118530 29.730 222 147 3 40 260 54 267 1.16e-20 95.5
MS.gene42511.t1 MTR_3g074330 48.421 95 42 1 14 101 64 158 1.56e-20 89.0
MS.gene42511.t1 MTR_3g074360 48.421 95 42 1 14 101 64 158 1.56e-20 89.0
MS.gene42511.t1 MTR_3g074310 48.421 95 42 1 14 101 64 158 1.86e-20 89.0
MS.gene42511.t1 MTR_3g118530 29.730 222 147 3 40 260 54 267 2.54e-20 94.4
MS.gene42511.t1 MTR_2g020710 27.405 343 211 13 34 361 91 410 2.57e-20 93.2
MS.gene42511.t1 MTR_3g116060 31.214 173 114 2 40 209 52 222 3.06e-20 94.0
MS.gene42511.t1 MTR_3g116060 27.660 235 151 7 206 428 484 711 5.64e-11 65.1
MS.gene42511.t1 MTR_5g024740 28.829 222 140 4 39 255 53 261 4.83e-20 93.6
MS.gene42511.t1 MTR_2g020710 27.485 342 210 13 34 360 91 409 5.65e-20 92.0
MS.gene42511.t1 MTR_4g118610 26.269 335 225 8 34 361 94 413 5.99e-20 92.0
MS.gene42511.t1 MTR_7g113960 27.305 282 183 7 28 300 60 328 9.50e-20 91.3
MS.gene42511.t1 MTR_8g073100 25.703 249 167 4 39 282 53 288 1.18e-18 89.4
MS.gene42511.t1 MTR_2g020710 28.315 279 168 11 34 299 91 350 3.00e-18 86.7
MS.gene42511.t1 MTR_5g044910 29.167 168 114 2 39 203 53 218 6.29e-18 87.0
MS.gene42511.t1 MTR_7g113970 26.937 271 183 8 34 300 104 363 3.56e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42511.t1 AT4G02050 79.863 437 88 0 13 449 67 503 0.0 750
MS.gene42511.t1 AT4G02050 79.863 437 88 0 13 449 67 503 0.0 750
MS.gene42511.t1 AT5G26340 59.540 435 173 3 19 450 71 505 0.0 558
MS.gene42511.t1 AT1G77210 57.373 434 184 1 10 442 64 497 0.0 535
MS.gene42511.t1 AT1G77210 57.373 434 184 1 10 442 64 497 0.0 535
MS.gene42511.t1 AT3G19940 54.338 438 198 1 12 447 65 502 0.0 523
MS.gene42511.t1 AT1G50310 54.338 438 195 3 13 445 64 501 2.74e-179 511
MS.gene42511.t1 AT1G11260 57.241 435 182 2 10 440 61 495 3.42e-177 506
MS.gene42511.t1 AT3G19930 54.817 436 194 2 13 445 63 498 4.13e-173 495
MS.gene42511.t1 AT3G19930 54.817 436 194 2 13 445 63 498 4.13e-173 495
MS.gene42511.t1 AT4G21480 55.734 436 189 2 10 442 61 495 5.91e-169 484
MS.gene42511.t1 AT5G23270 54.884 430 191 2 14 440 67 496 5.32e-167 480
MS.gene42511.t1 AT3G05960 51.364 440 212 2 13 450 61 500 5.77e-164 472
MS.gene42511.t1 AT5G26250 51.501 433 209 1 13 444 62 494 1.56e-162 468
MS.gene42511.t1 AT1G34580 51.376 436 204 4 13 441 14 448 2.92e-159 458
MS.gene42511.t1 AT1G34580 51.376 436 204 4 13 441 64 498 9.49e-159 459
MS.gene42511.t1 AT5G61520 50.346 433 212 3 13 443 21 452 6.37e-155 447
MS.gene42511.t1 AT5G61520 49.887 441 218 3 5 443 61 500 3.82e-154 447
MS.gene42511.t1 AT1G77210 57.143 343 146 1 101 442 6 348 8.58e-148 425
MS.gene42511.t1 AT1G50310 53.736 348 158 2 101 445 11 358 5.39e-140 406
MS.gene42511.t1 AT1G07340 48.961 433 217 4 13 442 63 494 1.77e-138 407
MS.gene42511.t1 AT2G18480 31.019 432 265 12 25 430 55 479 3.02e-47 170
MS.gene42511.t1 AT3G18830 29.797 443 274 10 25 436 69 505 5.41e-47 170
MS.gene42511.t1 AT4G36670 29.128 436 283 9 25 437 50 482 9.44e-47 168
MS.gene42511.t1 AT2G43330 28.822 399 265 7 52 439 94 484 6.62e-45 164
MS.gene42511.t1 AT2G16120 29.384 422 275 6 38 437 72 492 6.63e-45 164
MS.gene42511.t1 AT1G75220 29.861 432 273 7 24 435 66 487 8.53e-45 163
MS.gene42511.t1 AT2G16130 29.398 415 270 6 38 430 72 485 9.29e-44 160
MS.gene42511.t1 AT1G19450 29.330 433 274 8 24 435 67 488 2.50e-40 151
MS.gene42511.t1 AT5G16150 28.372 430 285 8 6 430 127 538 4.26e-40 151
MS.gene42511.t1 AT5G16150 28.372 430 285 8 6 430 127 538 4.26e-40 151
MS.gene42511.t1 AT5G16150 28.372 430 285 8 6 430 127 538 4.26e-40 151
MS.gene42511.t1 AT5G59250 30.861 418 253 12 35 430 149 552 1.88e-39 149
MS.gene42511.t1 AT3G05165 28.431 408 267 7 31 430 69 459 3.57e-39 147
MS.gene42511.t1 AT3G05165 28.431 408 267 7 31 430 69 459 3.57e-39 147
MS.gene42511.t1 AT3G05165 28.431 408 267 7 31 430 69 459 3.57e-39 147
MS.gene42511.t1 AT1G05030 28.049 410 276 9 28 430 64 461 6.77e-39 147
MS.gene42511.t1 AT1G05030 28.049 410 276 9 28 430 116 513 1.06e-38 147
MS.gene42511.t1 AT5G27360 28.148 405 270 6 32 430 75 464 1.07e-38 146
MS.gene42511.t1 AT5G17010 29.612 412 263 9 35 430 98 498 1.18e-38 146
MS.gene42511.t1 AT5G17010 29.612 412 263 9 35 430 98 498 1.18e-38 146
MS.gene42511.t1 AT5G17010 29.612 412 263 9 35 430 98 498 1.18e-38 146
MS.gene42511.t1 AT5G27350 28.784 403 270 7 32 430 71 460 1.24e-38 146
MS.gene42511.t1 AT1G08930 28.922 408 259 10 34 430 100 487 1.69e-38 146
MS.gene42511.t1 AT1G08930 28.922 408 259 10 34 430 100 487 1.69e-38 146
MS.gene42511.t1 AT5G27360 28.148 405 270 6 32 430 123 512 1.74e-38 146
MS.gene42511.t1 AT1G08900 27.407 405 269 7 34 430 25 412 4.61e-38 143
MS.gene42511.t1 AT5G27360 29.167 360 234 6 77 430 16 360 7.68e-38 142
MS.gene42511.t1 AT5G27360 29.167 360 234 6 77 430 16 360 7.68e-38 142
MS.gene42511.t1 AT1G08890 28.186 408 262 11 34 430 69 456 7.92e-38 144
MS.gene42511.t1 AT3G03090 28.365 416 263 9 35 430 98 498 1.13e-37 144
MS.gene42511.t1 AT1G08900 27.407 405 269 7 34 430 67 454 1.17e-37 143
MS.gene42511.t1 AT1G08900 27.407 405 269 7 34 430 67 454 1.17e-37 143
MS.gene42511.t1 AT1G08900 27.407 405 269 7 34 430 59 446 1.24e-37 143
MS.gene42511.t1 AT2G48020 25.943 424 296 7 11 430 48 457 1.92e-36 140
MS.gene42511.t1 AT2G48020 25.943 424 296 7 11 430 48 457 1.92e-36 140
MS.gene42511.t1 AT2G20780 27.361 413 275 10 37 435 100 501 5.34e-35 137
MS.gene42511.t1 AT2G20780 27.494 411 277 10 37 435 42 443 6.66e-35 135
MS.gene42511.t1 AT3G05160 28.431 408 265 8 32 430 12 401 1.88e-34 133
MS.gene42511.t1 AT3G05160 28.431 408 265 8 32 430 12 401 1.88e-34 133
MS.gene42511.t1 AT5G18840 28.640 419 261 10 34 437 86 481 2.40e-34 134
MS.gene42511.t1 AT3G05400 25.700 393 275 7 42 430 76 455 2.83e-34 134
MS.gene42511.t1 AT3G05160 28.362 409 266 8 31 430 60 450 4.27e-34 133
MS.gene42511.t1 AT1G30220 32.806 253 162 4 55 300 94 345 7.83e-34 134
MS.gene42511.t1 AT3G05165 29.014 355 226 8 31 376 69 406 9.63e-34 133
MS.gene42511.t1 AT3G05400 28.075 374 248 8 65 430 75 435 1.10e-33 132
MS.gene42511.t1 AT3G05165 28.857 350 224 7 32 373 70 402 1.62e-33 132
MS.gene42511.t1 AT3G05165 28.857 350 224 7 32 373 70 402 1.62e-33 132
MS.gene42511.t1 AT4G04750 27.475 404 272 7 34 430 78 467 1.79e-33 132
MS.gene42511.t1 AT4G04750 27.475 404 272 7 34 430 78 467 1.79e-33 132
MS.gene42511.t1 AT4G04750 27.475 404 272 7 34 430 122 511 1.97e-33 132
MS.gene42511.t1 AT4G16480 32.258 279 172 5 52 317 90 364 3.71e-33 132
MS.gene42511.t1 AT4G16480 32.258 279 172 5 52 317 90 364 3.71e-33 132
MS.gene42511.t1 AT4G16480 32.258 279 172 5 52 317 90 364 3.71e-33 132
MS.gene42511.t1 AT1G08900 27.473 364 239 7 34 389 67 413 1.96e-32 128
MS.gene42511.t1 AT2G35740 29.450 309 205 6 20 316 55 362 2.02e-32 130
MS.gene42511.t1 AT4G04760 28.395 405 268 7 34 430 14 404 5.65e-32 126
MS.gene42511.t1 AT1G54730 26.119 402 282 7 34 432 74 463 5.92e-32 127
MS.gene42511.t1 AT4G04760 28.395 405 268 7 34 430 73 463 2.12e-31 125
MS.gene42511.t1 AT3G05155 24.566 403 285 7 32 430 67 454 3.40e-31 125
MS.gene42511.t1 AT1G79820 25.381 394 272 8 44 430 108 486 8.26e-29 119
MS.gene42511.t1 AT1G79820 25.381 394 272 8 44 430 108 486 8.26e-29 119
MS.gene42511.t1 AT4G04760 27.561 410 262 8 34 430 73 460 4.34e-28 116
MS.gene42511.t1 AT1G08920 24.455 413 271 7 34 430 74 461 6.20e-28 115
MS.gene42511.t1 AT1G67300 25.063 395 275 8 44 430 105 486 3.03e-27 114
MS.gene42511.t1 AT1G67300 25.063 395 274 7 44 430 105 485 4.32e-27 114
MS.gene42511.t1 AT1G67300 25.063 395 274 7 44 430 105 485 4.32e-27 114
MS.gene42511.t1 AT1G08920 24.048 420 271 7 34 430 74 468 5.97e-27 113
MS.gene42511.t1 AT5G27360 26.608 342 230 6 32 367 75 401 9.77e-27 112
MS.gene42511.t1 AT1G54730 25.373 402 264 8 34 432 74 442 1.05e-26 112
MS.gene42511.t1 AT1G67300 25.146 342 235 6 44 378 105 432 2.45e-26 111
MS.gene42511.t1 AT1G67300 25.146 342 235 6 44 378 105 432 2.45e-26 111
MS.gene42511.t1 AT1G54730 25.070 359 254 7 34 389 74 420 5.77e-26 109
MS.gene42511.t1 AT1G79820 24.852 338 239 6 44 378 108 433 1.10e-25 109
MS.gene42511.t1 AT1G67300 25.301 332 227 6 44 368 105 422 2.87e-25 107
MS.gene42511.t1 AT1G67300 25.301 332 227 6 44 368 105 422 2.87e-25 107
MS.gene42511.t1 AT3G05150 24.757 412 282 9 32 433 75 468 4.90e-25 107
MS.gene42511.t1 AT3G05150 24.757 412 282 9 32 433 75 468 7.90e-25 107
MS.gene42511.t1 AT3G05150 24.757 412 282 9 32 433 75 468 7.90e-25 107
MS.gene42511.t1 AT1G08920 23.925 372 242 7 34 389 74 420 9.91e-24 103
MS.gene42511.t1 AT3G51490 31.481 162 110 1 49 209 63 224 4.89e-22 99.8
MS.gene42511.t1 AT3G51490 31.481 162 110 1 49 209 63 224 5.21e-22 99.8
MS.gene42511.t1 AT3G51490 30.409 171 118 1 40 209 4 174 5.38e-22 99.4
MS.gene42511.t1 AT1G54730 24.773 331 234 7 34 361 74 392 8.00e-21 94.7
MS.gene42511.t1 AT1G54730 24.773 331 234 7 34 361 74 392 8.00e-21 94.7
MS.gene42511.t1 AT1G54730 24.234 359 236 8 34 389 74 399 8.63e-21 94.4
MS.gene42511.t1 AT1G79820 23.604 394 231 7 44 430 108 438 2.02e-20 93.6
MS.gene42511.t1 AT3G20460 24.279 416 283 9 28 430 86 482 2.14e-20 94.0
MS.gene42511.t1 AT2G48020 24.921 317 222 6 11 323 48 352 5.91e-20 91.7
MS.gene42511.t1 AT5G17010 25.980 408 219 12 35 430 99 435 1.12e-18 88.6
MS.gene42511.t1 AT3G05155 24.354 271 191 5 32 300 67 325 1.32e-18 87.0
MS.gene42511.t1 AT2G48020 25.170 294 204 6 11 300 48 329 1.53e-18 87.0
MS.gene42511.t1 AT1G54730 25.556 270 188 6 34 300 74 333 4.44e-18 85.5
MS.gene42511.t1 AT1G79820 24.110 365 207 7 73 430 75 376 8.87e-18 85.1
MS.gene42511.t1 AT1G54730 25.862 232 162 5 34 262 74 298 3.33e-17 82.8
MS.gene42511.t1 AT1G54730 25.862 232 162 5 34 262 74 298 3.33e-17 82.8
MS.gene42511.t1 AT1G20840 29.121 182 126 2 29 209 43 222 6.78e-17 84.0
MS.gene42511.t1 AT1G20840 29.121 182 126 2 29 209 43 222 6.78e-17 84.0
MS.gene42511.t1 AT1G54730 25.862 232 162 5 34 262 74 298 8.03e-17 82.4
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.12e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.29e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.29e-16 81.6
MS.gene42511.t1 AT4G35300 31.169 154 105 1 57 209 71 224 3.29e-16 81.6

Find 137 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGCCAATATGATAAATTT+TGG 0.137172 7.1:+15773819 MS.gene42511:CDS
ATGGGAATACCTTTGGTTTC+AGG 0.188422 7.1:-15774959 None:intergenic
TTTCAAGTGGCAACAACTTT+TGG 0.211854 7.1:+15773789 MS.gene42511:CDS
CTCGGCATTGGCATTGGATT+TGG 0.233409 7.1:+15773276 MS.gene42511:CDS
ATTATTCTTGGGGTCAAGTT+TGG 0.261275 7.1:+15774644 MS.gene42511:CDS
CTTCTCTGCTCATTCAAGTT+TGG 0.265759 7.1:+15774875 MS.gene42511:CDS
CATTACTGTGATGTGTTTAC+AGG 0.274856 7.1:-15775034 None:intergenic
TGTTCCAAAATTTATCATAT+TGG 0.279298 7.1:-15773823 None:intergenic
GTCCAAAGGCTATTCAATAT+TGG 0.296291 7.1:+15774682 MS.gene42511:CDS
TTATTCTTGGGGTCAAGTTT+GGG 0.297946 7.1:+15774645 MS.gene42511:CDS
AATAGCCTTTGGACAGTTCT+TGG 0.304135 7.1:-15774673 None:intergenic
TGCCTATTTGTTGTAGCATT+TGG 0.311203 7.1:+15774719 MS.gene42511:CDS
GTTATAGTTGCAATTATTCT+TGG 0.312542 7.1:+15774632 MS.gene42511:CDS
ACCTCTTCTCTATACATTGC+CGG 0.322689 7.1:+15773105 MS.gene42511:CDS
CTCTTCAATGGGAATACCTT+TGG 0.335400 7.1:-15774966 None:intergenic
ATGGAGGCTGTCCCTAGGCT+TGG 0.353565 7.1:+15773866 MS.gene42511:CDS
TGTGGAGGAAGCATTGGTTC+TGG 0.368859 7.1:+15774999 MS.gene42511:CDS
CATAAATGCCATCTCTTCAA+TGG 0.370534 7.1:-15774978 None:intergenic
TTCAATATTGGTTGTAGTTG+TGG 0.376102 7.1:+15774694 MS.gene42511:CDS
ATCCAAATGCTACAACAAAT+AGG 0.379073 7.1:-15774721 None:intergenic
TTATAGTTGCAATTATTCTT+GGG 0.380461 7.1:+15774633 MS.gene42511:CDS
CGTCCATACTTCCTTGTAAT+GGG 0.397253 7.1:-15773153 None:intergenic
TCTCCCATTACAAGGAAGTA+TGG 0.398239 7.1:+15773150 MS.gene42511:CDS
CTCTACTCCTCGGCTTTGAC+TGG 0.402079 7.1:+15774227 MS.gene42511:CDS
TGATGCAGAGTTTGAAGATA+TGG 0.403313 7.1:+15774019 MS.gene42511:CDS
TGGCATTGGATTTGGAAATC+AGG 0.404411 7.1:+15773284 MS.gene42511:CDS
AGAACGAGGATTAGAAGAAA+GGG 0.404693 7.1:+15773956 MS.gene42511:CDS
TTGTAATGGGAGATGCAATC+AGG 0.405356 7.1:-15773140 None:intergenic
AACCAATATTGAATAGCCTT+TGG 0.406744 7.1:-15774684 None:intergenic
CTGTTTCAAAGCATGGGATT+CGG 0.410422 7.1:+15774191 MS.gene42511:CDS
GGCCGTGTTATGCTCGGCAT+TGG 0.424294 7.1:+15773264 MS.gene42511:CDS
GGTCGTGGGGCCCACTTGGT+TGG 0.426073 7.1:+15774744 MS.gene42511:CDS
TAGAACGAGGATTAGAAGAA+AGG 0.427403 7.1:+15773955 MS.gene42511:CDS
CCTGCTGAACGGATTTCTAA+TGG 0.431912 7.1:-15774788 None:intergenic
CAAGAACAGAACAACAAATA+TGG 0.432549 7.1:-15774936 None:intergenic
CCTCGTTCTATTAAGCTGTT+CGG 0.436515 7.1:-15773942 None:intergenic
GTTATGCTCGGCATTGGCAT+TGG 0.439563 7.1:+15773270 MS.gene42511:CDS
CCATTAGAAATCCGTTCAGC+AGG 0.440401 7.1:+15774788 MS.gene42511:CDS
TATTAAGCTGTTCGGAGTCT+CGG 0.440925 7.1:-15773934 None:intergenic
CCTAGGCTTGGCTGCCGTAC+CGG 0.442685 7.1:+15773878 MS.gene42511:CDS
TTTCACTTTCGTAATTGCTC+AGG 0.446096 7.1:+15774841 MS.gene42511:CDS
GTGGGGCCCACTTGGTTGGA+CGG 0.449151 7.1:+15774748 MS.gene42511:CDS
GGTGGTAGTAGCTTTCTGAT+TGG 0.452031 7.1:+15773195 MS.gene42511:CDS
AAGCTCCTAGAGAAAATTAG+AGG 0.455916 7.1:+15773984 MS.gene42511:CDS
CCGGTACGGCAGCCAAGCCT+AGG 0.456998 7.1:-15773878 None:intergenic
TTTCGAGTATGTTACGAAAC+GGG 0.458322 7.1:-15774076 None:intergenic
ACATACTCGAAAGAAGGTAT+AGG 0.458724 7.1:+15774087 MS.gene42511:CDS
ATTAAGCTGTTCGGAGTCTC+GGG 0.459490 7.1:-15773933 None:intergenic
TAGGGACAGCCTCCATCCCC+AGG 0.465250 7.1:-15773859 None:intergenic
TGGGGATGGAGGCTGTCCCT+AGG 0.469496 7.1:+15773861 MS.gene42511:CDS
CATTGCAACAGTTGATAAGC+TGG 0.471188 7.1:+15774280 MS.gene42511:CDS
AGGTAAATGCCGCAAGGCCC+TGG 0.473138 7.1:-15773086 None:intergenic
ATAAATGCCATCTCTTCAAT+GGG 0.473898 7.1:-15774977 None:intergenic
GGATGGTCGTGGGGCCCACT+TGG 0.474738 7.1:+15774740 MS.gene42511:CDS
CATTTATGTGGAGGAAGCAT+TGG 0.474974 7.1:+15774993 MS.gene42511:CDS
TCCGGTGCTGTTTCAAAGCA+TGG 0.475103 7.1:+15774184 MS.gene42511:CDS
TTCCATTCTCTTCTATGCTC+CGG 0.477795 7.1:+15774166 MS.gene42511:CDS
TTGTAGCATTTGGATGGTCG+TGG 0.479330 7.1:+15774729 MS.gene42511:CDS
TACAAGGAAGTATGGACGTC+GGG 0.482939 7.1:+15773158 MS.gene42511:CDS
ACAATTGCCATCACCAACTC+TGG 0.484629 7.1:-15774110 None:intergenic
TCCACTTTATTTGTCAGAGA+TGG 0.487346 7.1:+15773731 MS.gene42511:CDS
CCAGTCAAGATTTGTGAAGT+TGG 0.488855 7.1:-15774137 None:intergenic
ACGTCCATACTTCCTTGTAA+TGG 0.497070 7.1:-15773154 None:intergenic
CTTTCGAGTATGTTACGAAA+CGG 0.501595 7.1:-15774077 None:intergenic
AATCAGGGATGCAACTAAAC+CGG 0.502456 7.1:-15773124 None:intergenic
AACCTCACAATGCTGATCTT+CGG 0.502742 7.1:+15773243 MS.gene42511:CDS
AATCCTCCTCGCAGGTGGGT+TGG 0.510788 7.1:-15773756 None:intergenic
TTGAAGAGATGGCATTTATG+TGG 0.513777 7.1:+15774981 MS.gene42511:CDS
TGTAGCATTTGGATGGTCGT+GGG 0.515391 7.1:+15774730 MS.gene42511:CDS
TGTTCAATCCTCCTCGCAGG+TGG 0.517855 7.1:-15773761 None:intergenic
CAGCTTATCAACTGTTGCAA+TGG 0.520597 7.1:-15774279 None:intergenic
AATACAAATGATCATATGTC+AGG 0.523087 7.1:+15774331 MS.gene42511:CDS
CCAACTTCACAAATCTTGAC+TGG 0.529164 7.1:+15774137 MS.gene42511:CDS
CCGGTGCTGTTTCAAAGCAT+GGG 0.532079 7.1:+15774185 MS.gene42511:CDS
TCTAATGGAAATATCTCACT+TGG 0.533960 7.1:-15774773 None:intergenic
AGATTAAACCCTGGGGATGG+AGG 0.535327 7.1:+15773850 MS.gene42511:CDS
AACACAGAAGATTAAACCCT+GGG 0.537070 7.1:+15773842 MS.gene42511:CDS
CAGCAGGGAAGAATTCTTCA+AGG 0.539718 7.1:-15773010 None:intergenic
GCCATCTCTGACAAATAAAG+TGG 0.544231 7.1:-15773732 None:intergenic
AGGTATTCCCATTGAAGAGA+TGG 0.545003 7.1:+15774970 MS.gene42511:CDS
TACTCCTCGGCTTTGACTGG+TGG 0.545786 7.1:+15774230 MS.gene42511:CDS
TATTTGTTGTAGCATTTGGA+TGG 0.547450 7.1:+15774723 MS.gene42511:CDS
ATCTTCGGCCGTGTTATGCT+CGG 0.549989 7.1:+15773258 MS.gene42511:CDS
CGTCATCAAAAGAGCCGGTA+CGG 0.552962 7.1:-15773892 None:intergenic
TTCGTAACATACTCGAAAGA+AGG 0.553553 7.1:+15774081 MS.gene42511:CDS
CACCGGAGCATAGAAGAGAA+TGG 0.554274 7.1:-15774168 None:intergenic
TATAGTTGCAATTATTCTTG+GGG 0.555101 7.1:+15774634 MS.gene42511:CDS
AGAGTTCTTCTTATCAGTGG+TGG 0.556292 7.1:+15774308 MS.gene42511:CDS
CTGTTCTTGCCTGAAACCAA+AGG 0.561132 7.1:+15774950 MS.gene42511:CDS
TTACTGCAAGTACGACAACC+AGG 0.562937 7.1:+15773068 MS.gene42511:CDS
GAACGAGGATTAGAAGAAAG+GGG 0.568609 7.1:+15773957 MS.gene42511:CDS
TGATTGCATCTCCCATTACA+AGG 0.569353 7.1:+15773142 MS.gene42511:CDS
TGTAATGGGAGATGCAATCA+GGG 0.578905 7.1:-15773139 None:intergenic
GGTCATGAGGGTAATCCAGC+CGG 0.579949 7.1:-15774915 None:intergenic
CGTCGGGCAAGTATCATCAC+TGG 0.581520 7.1:+15773174 MS.gene42511:CDS
ATTGAACATGATGTTTCAAG+TGG 0.581559 7.1:+15773776 MS.gene42511:CDS
GAGGATTAGAAGAAAGGGGA+AGG 0.582549 7.1:+15773961 MS.gene42511:CDS
TATTCTTGGGGTCAAGTTTG+GGG 0.582970 7.1:+15774646 MS.gene42511:CDS
GAACAACAAATATGGTCATG+AGG 0.584422 7.1:-15774928 None:intergenic
TGCCAATGCCGAGCATAACA+CGG 0.585387 7.1:-15773266 None:intergenic
ATTGCAACAGTTGATAAGCT+GGG 0.585996 7.1:+15774281 MS.gene42511:CDS
TATGGTTGATGCAAGCAAGT+TGG 0.586122 7.1:+15774037 MS.gene42511:CDS
TCATGTTCAATCCTCCTCGC+AGG 0.587735 7.1:-15773764 None:intergenic
TGATACTCTGCCCTGCTGAA+CGG 0.588483 7.1:-15774799 None:intergenic
CGGTACGGCAGCCAAGCCTA+GGG 0.588612 7.1:-15773877 None:intergenic
CAACAGTTGATAAGCTGGGA+AGG 0.589487 7.1:+15774285 MS.gene42511:CDS
AAGAGATGGCATTTATGTGG+AGG 0.590666 7.1:+15774984 MS.gene42511:CDS
AGAAGATTAAACCCTGGGGA+TGG 0.590747 7.1:+15773847 MS.gene42511:CDS
CCTATCGTCATCAAAAGAGC+CGG 0.591632 7.1:-15773897 None:intergenic
CCCATGCTTTGAAACAGCAC+CGG 0.593331 7.1:-15774185 None:intergenic
AGGGACAGCCTCCATCCCCA+GGG 0.595397 7.1:-15773858 None:intergenic
AGGAGAGTTCTTCTTATCAG+TGG 0.598221 7.1:+15774305 MS.gene42511:CDS
AACAACAAATATGGTCATGA+GGG 0.601571 7.1:-15774927 None:intergenic
AGACGCTTCGCTCTACTCCT+CGG 0.602710 7.1:+15774217 MS.gene42511:CDS
TTTCAAAGCATGGGATTCGG+TGG 0.606366 7.1:+15774194 MS.gene42511:CDS
ACCGGCAATGTATAGAGAAG+AGG 0.612477 7.1:-15773106 None:intergenic
GTTCAATCCTCCTCGCAGGT+GGG 0.618257 7.1:-15773760 None:intergenic
AAGAAGGTATAGGCCAGAGT+TGG 0.622934 7.1:+15774097 MS.gene42511:CDS
CATTAGAAATCCGTTCAGCA+GGG 0.625750 7.1:+15774789 MS.gene42511:CDS
GTATAGGCCAGAGTTGGTGA+TGG 0.643752 7.1:+15774103 MS.gene42511:CDS
GTACGACAACCAGGGCCTTG+CGG 0.646710 7.1:+15773077 MS.gene42511:CDS
GGCCGAAGATCAGCATTGTG+AGG 0.651398 7.1:-15773245 None:intergenic
CTTGGAACCGTCCAACCAAG+TGG 0.658194 7.1:-15774755 None:intergenic
CCGAACAGCTTAATAGAACG+AGG 0.659416 7.1:+15773942 MS.gene42511:CDS
TTGGAACCGTCCAACCAAGT+GGG 0.660848 7.1:-15774754 None:intergenic
GTAGCATTTGGATGGTCGTG+GGG 0.662597 7.1:+15774731 MS.gene42511:CDS
GAGAAGAGGTAAATGCCGCA+AGG 0.671707 7.1:-15773092 None:intergenic
CGGGCAAGTATCATCACTGG+TGG 0.673943 7.1:+15773177 MS.gene42511:CDS
AACGCCACCAGTCAAAGCCG+AGG 0.679011 7.1:-15774234 None:intergenic
GCACCAACCCACCTGCGAGG+AGG 0.681672 7.1:+15773753 MS.gene42511:CDS
ATGGCACCAACCCACCTGCG+AGG 0.683221 7.1:+15773750 MS.gene42511:CDS
GAACACAGAAGATTAAACCC+TGG 0.684252 7.1:+15773841 MS.gene42511:CDS
GATAACCAAGAACTGTCCAA+AGG 0.687640 7.1:+15774668 MS.gene42511:CDS
TACTGCAAGTACGACAACCA+GGG 0.691497 7.1:+15773069 MS.gene42511:CDS
TGAATGAGCAGAGAAGAGCA+AGG 0.694537 7.1:-15774868 None:intergenic
TTACAAGGAAGTATGGACGT+CGG 0.698563 7.1:+15773157 MS.gene42511:CDS
ACACAGAAGATTAAACCCTG+GGG 0.794077 7.1:+15773843 MS.gene42511:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACATACATTAAAATAAT+AGG + chr7.1:15774442-15774461 MS.gene42511:intron 10.0%
!!! ATTTTAGTTCATAAAATTTA+CGG + chr7.1:15773586-15773605 MS.gene42511:intron 10.0%
!! ACATTAAAATAATAGGAAAA+AGG + chr7.1:15774449-15774468 MS.gene42511:intron 15.0%
!!! TTTTAGTTCATAAAATTTAC+GGG + chr7.1:15773587-15773606 MS.gene42511:intron 15.0%
!!! TTTTATTACAACTAAATAGA+GGG - chr7.1:15774515-15774534 None:intergenic 15.0%
!!! TTTTTATTACAACTAAATAG+AGG - chr7.1:15774516-15774535 None:intergenic 15.0%
!! TGTTCCAAAATTTATCATAT+TGG - chr7.1:15773826-15773845 None:intergenic 20.0%
!! TTATAGTTGCAATTATTCTT+GGG + chr7.1:15774633-15774652 MS.gene42511:CDS 20.0%
!!! AAATAATTTGTCAACTTTTG+AGG - chr7.1:15773677-15773696 None:intergenic 20.0%
!!! ATAGCCAATATGATAAATTT+TGG + chr7.1:15773819-15773838 MS.gene42511:CDS 20.0%
!!! ATGGTAATTTTTTCTATGAA+AGG + chr7.1:15773447-15773466 MS.gene42511:intron 20.0%
! AATACAAATGATCATATGTC+AGG + chr7.1:15774331-15774350 MS.gene42511:CDS 25.0%
! AGAATTATTTCCCAACTTAA+TGG - chr7.1:15774408-15774427 None:intergenic 25.0%
! ATAATAGGAAAAAGGCAATA+AGG + chr7.1:15774457-15774476 MS.gene42511:intron 25.0%
! ATTGATCATGAATTCATCAT+AGG - chr7.1:15773383-15773402 None:intergenic 25.0%
! CAATTACGAAAGTGAAAAAA+AGG - chr7.1:15774838-15774857 None:intergenic 25.0%
! GTTATAGTTGCAATTATTCT+TGG + chr7.1:15774632-15774651 MS.gene42511:CDS 25.0%
! TATAGTTGCAATTATTCTTG+GGG + chr7.1:15774634-15774653 MS.gene42511:CDS 25.0%
!!! GAAACATTTTTTTCCTTTAC+TGG + chr7.1:15773415-15773434 MS.gene42511:intron 25.0%
!!! GTAATTTTTTCTATGAAAGG+AGG + chr7.1:15773450-15773469 MS.gene42511:intron 25.0%
AACAACAAATATGGTCATGA+GGG - chr7.1:15774930-15774949 None:intergenic 30.0%
AACCAATATTGAATAGCCTT+TGG - chr7.1:15774687-15774706 None:intergenic 30.0%
AAGGAAAGATAGTAATGTGA+TGG + chr7.1:15773611-15773630 MS.gene42511:intron 30.0%
ACAAGTATCAAACAGTTTGA+AGG + chr7.1:15773522-15773541 MS.gene42511:intron 30.0%
ATAAATGCCATCTCTTCAAT+GGG - chr7.1:15774980-15774999 None:intergenic 30.0%
ATCATGAATTCATCATAGGT+AGG - chr7.1:15773379-15773398 None:intergenic 30.0%
ATCCAAATGCTACAACAAAT+AGG - chr7.1:15774724-15774743 None:intergenic 30.0%
ATTGAACATGATGTTTCAAG+TGG + chr7.1:15773776-15773795 MS.gene42511:CDS 30.0%
CAAACTGTTTGATACTTGTT+TGG - chr7.1:15773521-15773540 None:intergenic 30.0%
CAAGAACAGAACAACAAATA+TGG - chr7.1:15774939-15774958 None:intergenic 30.0%
CAAGTATCAAACAGTTTGAA+GGG + chr7.1:15773523-15773542 MS.gene42511:intron 30.0%
GTTCATAAAATTTACGGGAA+AGG + chr7.1:15773592-15773611 MS.gene42511:intron 30.0%
TAATGCAGTAATGCTAGAAT+CGG + chr7.1:15774560-15774579 MS.gene42511:intron 30.0%
TCTAATGGAAATATCTCACT+TGG - chr7.1:15774776-15774795 None:intergenic 30.0%
TTGTTTGGATAATCAAGAGA+CGG - chr7.1:15773506-15773525 None:intergenic 30.0%
! TAGTTCCTCTAATTTTCTCT+AGG - chr7.1:15773992-15774011 None:intergenic 30.0%
! TGATAAATCCTTAAGAGTGT+TGG + chr7.1:15773334-15773353 MS.gene42511:intron 30.0%
! TTCAATATTGGTTGTAGTTG+TGG + chr7.1:15774694-15774713 MS.gene42511:CDS 30.0%
!! TATTTGTTGTAGCATTTGGA+TGG + chr7.1:15774723-15774742 MS.gene42511:CDS 30.0%
!!! ATTTTTTCTATGAAAGGAGG+AGG + chr7.1:15773453-15773472 MS.gene42511:intron 30.0%
!!! TTTTTTGTCTGTATACAGCA+GGG - chr7.1:15773028-15773047 None:intergenic 30.0%
AACACAGAAGATTAAACCCT+GGG + chr7.1:15773842-15773861 MS.gene42511:CDS 35.0%
AAGCTCCTAGAGAAAATTAG+AGG + chr7.1:15773984-15774003 MS.gene42511:CDS 35.0%
AGAACGAGGATTAGAAGAAA+GGG + chr7.1:15773956-15773975 MS.gene42511:CDS 35.0%
AGAATCGGAACAAAAATTGC+AGG + chr7.1:15774575-15774594 MS.gene42511:intron 35.0%
ATTATTCTTGGGGTCAAGTT+TGG + chr7.1:15774644-15774663 MS.gene42511:CDS 35.0%
CATAAATGCCATCTCTTCAA+TGG - chr7.1:15774981-15775000 None:intergenic 35.0%
GAACAACAAATATGGTCATG+AGG - chr7.1:15774931-15774950 None:intergenic 35.0%
GAATCGGAACAAAAATTGCA+GGG + chr7.1:15774576-15774595 MS.gene42511:intron 35.0%
GTCCAAAGGCTATTCAATAT+TGG + chr7.1:15774682-15774701 MS.gene42511:CDS 35.0%
TAGAACGAGGATTAGAAGAA+AGG + chr7.1:15773955-15773974 MS.gene42511:CDS 35.0%
TAGGTGATACTTGACACAAT+AGG - chr7.1:15773360-15773379 None:intergenic 35.0%
TATTTCCCAACTTAATGGCA+CGG - chr7.1:15774403-15774422 None:intergenic 35.0%
TGATGCAGAGTTTGAAGATA+TGG + chr7.1:15774019-15774038 MS.gene42511:CDS 35.0%
TGTTTGGATAATCAAGAGAC+GGG - chr7.1:15773505-15773524 None:intergenic 35.0%
TTATTCTTGGGGTCAAGTTT+GGG + chr7.1:15774645-15774664 MS.gene42511:CDS 35.0%
TTCGTAACATACTCGAAAGA+AGG + chr7.1:15774081-15774100 MS.gene42511:CDS 35.0%
TTGAAGAGATGGCATTTATG+TGG + chr7.1:15774981-15775000 MS.gene42511:CDS 35.0%
TTTCACTTTCGTAATTGCTC+AGG + chr7.1:15774841-15774860 MS.gene42511:CDS 35.0%
! ACATACTCGAAAGAAGGTAT+AGG + chr7.1:15774087-15774106 MS.gene42511:CDS 35.0%
! CCATTGTTCTAAACCAGTAA+AGG - chr7.1:15773431-15773450 None:intergenic 35.0%
! CTTTCGAGTATGTTACGAAA+CGG - chr7.1:15774080-15774099 None:intergenic 35.0%
! TCCACTTTATTTGTCAGAGA+TGG + chr7.1:15773731-15773750 MS.gene42511:CDS 35.0%
! TTCAAGTGGCAACAACTTTT+GGG + chr7.1:15773790-15773809 MS.gene42511:CDS 35.0%
! TTTCGAGTATGTTACGAAAC+GGG - chr7.1:15774079-15774098 None:intergenic 35.0%
!! ATTGCAACAGTTGATAAGCT+GGG + chr7.1:15774281-15774300 MS.gene42511:CDS 35.0%
!! CCTTTACTGGTTTAGAACAA+TGG + chr7.1:15773428-15773447 MS.gene42511:intron 35.0%
!! GTTTCATTTTTCACATGAGC+AGG + chr7.1:15774610-15774629 MS.gene42511:intron 35.0%
!! TGCCTATTTGTTGTAGCATT+TGG + chr7.1:15774719-15774738 MS.gene42511:CDS 35.0%
!! TTTCAAGTGGCAACAACTTT+TGG + chr7.1:15773789-15773808 MS.gene42511:CDS 35.0%
!!! GTTTTTTGTCTGTATACAGC+AGG - chr7.1:15773029-15773048 None:intergenic 35.0%
AACCTCACAATGCTGATCTT+CGG + chr7.1:15773243-15773262 MS.gene42511:CDS 40.0%
AAGAGATGGCATTTATGTGG+AGG + chr7.1:15774984-15775003 MS.gene42511:CDS 40.0%
AATAGCCTTTGGACAGTTCT+TGG - chr7.1:15774676-15774695 None:intergenic 40.0%
AATCAGGGATGCAACTAAAC+CGG - chr7.1:15773127-15773146 None:intergenic 40.0%
ACAATAGGCCAACACTCTTA+AGG - chr7.1:15773345-15773364 None:intergenic 40.0%
ACACAGAAGATTAAACCCTG+GGG + chr7.1:15773843-15773862 MS.gene42511:CDS 40.0%
ACCTCTTCTCTATACATTGC+CGG + chr7.1:15773105-15773124 MS.gene42511:CDS 40.0%
ACGTCCATACTTCCTTGTAA+TGG - chr7.1:15773157-15773176 None:intergenic 40.0%
AGAGTTCTTCTTATCAGTGG+TGG + chr7.1:15774308-15774327 MS.gene42511:CDS 40.0%
AGGAGAGTTCTTCTTATCAG+TGG + chr7.1:15774305-15774324 MS.gene42511:CDS 40.0%
AGGTATTCCCATTGAAGAGA+TGG + chr7.1:15774970-15774989 MS.gene42511:CDS 40.0%
CAGCTTATCAACTGTTGCAA+TGG - chr7.1:15774282-15774301 None:intergenic 40.0%
CATTAGAAATCCGTTCAGCA+GGG + chr7.1:15774789-15774808 MS.gene42511:CDS 40.0%
CCAACTTCACAAATCTTGAC+TGG + chr7.1:15774137-15774156 MS.gene42511:CDS 40.0%
CCAGTCAAGATTTGTGAAGT+TGG - chr7.1:15774140-15774159 None:intergenic 40.0%
CCTCGTTCTATTAAGCTGTT+CGG - chr7.1:15773945-15773964 None:intergenic 40.0%
CGTCCATACTTCCTTGTAAT+GGG - chr7.1:15773156-15773175 None:intergenic 40.0%
CTCTTCAATGGGAATACCTT+TGG - chr7.1:15774969-15774988 None:intergenic 40.0%
CTGTTTCAAAGCATGGGATT+CGG + chr7.1:15774191-15774210 MS.gene42511:CDS 40.0%
GAACACAGAAGATTAAACCC+TGG + chr7.1:15773841-15773860 MS.gene42511:CDS 40.0%
GAACGAGGATTAGAAGAAAG+GGG + chr7.1:15773957-15773976 MS.gene42511:CDS 40.0%
GATAACCAAGAACTGTCCAA+AGG + chr7.1:15774668-15774687 MS.gene42511:CDS 40.0%
GCCATCTCTGACAAATAAAG+TGG - chr7.1:15773735-15773754 None:intergenic 40.0%
TATTAAGCTGTTCGGAGTCT+CGG - chr7.1:15773937-15773956 None:intergenic 40.0%
TATTCTTGGGGTCAAGTTTG+GGG + chr7.1:15774646-15774665 MS.gene42511:CDS 40.0%
TCTCCCATTACAAGGAAGTA+TGG + chr7.1:15773150-15773169 MS.gene42511:CDS 40.0%
TGATTGCATCTCCCATTACA+AGG + chr7.1:15773142-15773161 MS.gene42511:CDS 40.0%
TTCCATTCTCTTCTATGCTC+CGG + chr7.1:15774166-15774185 MS.gene42511:CDS 40.0%
! AAAGATCCGTGCCATTAAGT+TGG + chr7.1:15774394-15774413 MS.gene42511:intron 40.0%
! AAGATCCGTGCCATTAAGTT+GGG + chr7.1:15774395-15774414 MS.gene42511:intron 40.0%
! ATGGGAATACCTTTGGTTTC+AGG - chr7.1:15774962-15774981 None:intergenic 40.0%
! CATTTATGTGGAGGAAGCAT+TGG + chr7.1:15774993-15775012 MS.gene42511:CDS 40.0%
! CTTCTCTGCTCATTCAAGTT+TGG + chr7.1:15774875-15774894 MS.gene42511:CDS 40.0%
! TATGGTTGATGCAAGCAAGT+TGG + chr7.1:15774037-15774056 MS.gene42511:CDS 40.0%
! TGGCATTGGATTTGGAAATC+AGG + chr7.1:15773284-15773303 MS.gene42511:CDS 40.0%
! TGTAATGGGAGATGCAATCA+GGG - chr7.1:15773142-15773161 None:intergenic 40.0%
! TTACAAGGAAGTATGGACGT+CGG + chr7.1:15773157-15773176 MS.gene42511:CDS 40.0%
! TTGTAATGGGAGATGCAATC+AGG - chr7.1:15773143-15773162 None:intergenic 40.0%
!! CATTGCAACAGTTGATAAGC+TGG + chr7.1:15774280-15774299 MS.gene42511:CDS 40.0%
!! GGAATCTTTCTCTTTTTCGC+CGG + chr7.1:15774896-15774915 MS.gene42511:CDS 40.0%
!!! TCAAGAGACGGGTTTTAAGA+AGG - chr7.1:15773494-15773513 None:intergenic 40.0%
ACAATTGCCATCACCAACTC+TGG - chr7.1:15774113-15774132 None:intergenic 45.0%
ACCGGCAATGTATAGAGAAG+AGG - chr7.1:15773109-15773128 None:intergenic 45.0%
AGAAGATTAAACCCTGGGGA+TGG + chr7.1:15773847-15773866 MS.gene42511:CDS 45.0%
ATTAAGCTGTTCGGAGTCTC+GGG - chr7.1:15773936-15773955 None:intergenic 45.0%
CAGCAGGGAAGAATTCTTCA+AGG - chr7.1:15773013-15773032 None:intergenic 45.0%
CCATTAGAAATCCGTTCAGC+AGG + chr7.1:15774788-15774807 MS.gene42511:CDS 45.0%
CCGAACAGCTTAATAGAACG+AGG + chr7.1:15773942-15773961 MS.gene42511:CDS 45.0%
CCTATCGTCATCAAAAGAGC+CGG - chr7.1:15773900-15773919 None:intergenic 45.0%
CTGTTCTTGCCTGAAACCAA+AGG + chr7.1:15774950-15774969 MS.gene42511:CDS 45.0%
GAGGATTAGAAGAAAGGGGA+AGG + chr7.1:15773961-15773980 MS.gene42511:CDS 45.0%
GGTGGTAGTAGCTTTCTGAT+TGG + chr7.1:15773195-15773214 MS.gene42511:CDS 45.0%
TACTGCAAGTACGACAACCA+GGG + chr7.1:15773069-15773088 MS.gene42511:CDS 45.0%
TGAATGAGCAGAGAAGAGCA+AGG - chr7.1:15774871-15774890 None:intergenic 45.0%
TGTAGCATTTGGATGGTCGT+GGG + chr7.1:15774730-15774749 MS.gene42511:CDS 45.0%
TTACTGCAAGTACGACAACC+AGG + chr7.1:15773068-15773087 MS.gene42511:CDS 45.0%
TTGTAGCATTTGGATGGTCG+TGG + chr7.1:15774729-15774748 MS.gene42511:CDS 45.0%
TTTCAAAGCATGGGATTCGG+TGG + chr7.1:15774194-15774213 MS.gene42511:CDS 45.0%
! AAGAAGGTATAGGCCAGAGT+TGG + chr7.1:15774097-15774116 MS.gene42511:CDS 45.0%
! CCTGCTGAACGGATTTCTAA+TGG - chr7.1:15774791-15774810 None:intergenic 45.0%
! TACAAGGAAGTATGGACGTC+GGG + chr7.1:15773158-15773177 MS.gene42511:CDS 45.0%
! TGCCTTCAAAAGAAGCACGA+GGG - chr7.1:15773709-15773728 None:intergenic 45.0%
! TTCCCTCGTGCTTCTTTTGA+AGG + chr7.1:15773704-15773723 MS.gene42511:intron 45.0%
! TTGCCTTCAAAAGAAGCACG+AGG - chr7.1:15773710-15773729 None:intergenic 45.0%
!! CAACAGTTGATAAGCTGGGA+AGG + chr7.1:15774285-15774304 MS.gene42511:CDS 45.0%
!!! GCTCTTTTGATGACGATAGG+AGG + chr7.1:15773900-15773919 MS.gene42511:CDS 45.0%
AGATTAAACCCTGGGGATGG+AGG + chr7.1:15773850-15773869 MS.gene42511:CDS 50.0%
ATCTTCGGCCGTGTTATGCT+CGG + chr7.1:15773258-15773277 MS.gene42511:CDS 50.0%
CACCGGAGCATAGAAGAGAA+TGG - chr7.1:15774171-15774190 None:intergenic 50.0%
CGTCATCAAAAGAGCCGGTA+CGG - chr7.1:15773895-15773914 None:intergenic 50.0%
GAGAAGAGGTAAATGCCGCA+AGG - chr7.1:15773095-15773114 None:intergenic 50.0%
GTAGCATTTGGATGGTCGTG+GGG + chr7.1:15774731-15774750 MS.gene42511:CDS 50.0%
TCATGTTCAATCCTCCTCGC+AGG - chr7.1:15773767-15773786 None:intergenic 50.0%
TGATACTCTGCCCTGCTGAA+CGG - chr7.1:15774802-15774821 None:intergenic 50.0%
TGCCAATGCCGAGCATAACA+CGG - chr7.1:15773269-15773288 None:intergenic 50.0%
TTGGAACCGTCCAACCAAGT+GGG - chr7.1:15774757-15774776 None:intergenic 50.0%
!! CCCATGCTTTGAAACAGCAC+CGG - chr7.1:15774188-15774207 None:intergenic 50.0%
!! CCGGTGCTGTTTCAAAGCAT+GGG + chr7.1:15774185-15774204 MS.gene42511:CDS 50.0%
!! CTCGGCATTGGCATTGGATT+TGG + chr7.1:15773276-15773295 MS.gene42511:CDS 50.0%
!! GTATAGGCCAGAGTTGGTGA+TGG + chr7.1:15774103-15774122 MS.gene42511:CDS 50.0%
!! GTTATGCTCGGCATTGGCAT+TGG + chr7.1:15773270-15773289 MS.gene42511:CDS 50.0%
!! TCCGGTGCTGTTTCAAAGCA+TGG + chr7.1:15774184-15774203 MS.gene42511:CDS 50.0%
!! TCTTTCTCTTTTTCGCCGGC+TGG + chr7.1:15774900-15774919 MS.gene42511:CDS 50.0%
!! TGTGGAGGAAGCATTGGTTC+TGG + chr7.1:15774999-15775018 MS.gene42511:CDS 50.0%
!!! CCGGCTCTTTTGATGACGAT+AGG + chr7.1:15773897-15773916 MS.gene42511:CDS 50.0%
AGACGCTTCGCTCTACTCCT+CGG + chr7.1:15774217-15774236 MS.gene42511:CDS 55.0%
CGGGCAAGTATCATCACTGG+TGG + chr7.1:15773177-15773196 MS.gene42511:CDS 55.0%
CGTCGGGCAAGTATCATCAC+TGG + chr7.1:15773174-15773193 MS.gene42511:CDS 55.0%
CTTGGAACCGTCCAACCAAG+TGG - chr7.1:15774758-15774777 None:intergenic 55.0%
GGCCGAAGATCAGCATTGTG+AGG - chr7.1:15773248-15773267 None:intergenic 55.0%
GGTCATGAGGGTAATCCAGC+CGG - chr7.1:15774918-15774937 None:intergenic 55.0%
GTTCAATCCTCCTCGCAGGT+GGG - chr7.1:15773763-15773782 None:intergenic 55.0%
TGTTCAATCCTCCTCGCAGG+TGG - chr7.1:15773764-15773783 None:intergenic 55.0%
! CTCTACTCCTCGGCTTTGAC+TGG + chr7.1:15774227-15774246 MS.gene42511:CDS 55.0%
! TACTCCTCGGCTTTGACTGG+TGG + chr7.1:15774230-15774249 MS.gene42511:CDS 55.0%
AACGCCACCAGTCAAAGCCG+AGG - chr7.1:15774237-15774256 None:intergenic 60.0%
AATCCTCCTCGCAGGTGGGT+TGG - chr7.1:15773759-15773778 None:intergenic 60.0%
AGGTAAATGCCGCAAGGCCC+TGG - chr7.1:15773089-15773108 None:intergenic 60.0%
ATGGAGGCTGTCCCTAGGCT+TGG + chr7.1:15773866-15773885 MS.gene42511:CDS 60.0%
GGCCGTGTTATGCTCGGCAT+TGG + chr7.1:15773264-15773283 MS.gene42511:CDS 60.0%
GTACGACAACCAGGGCCTTG+CGG + chr7.1:15773077-15773096 MS.gene42511:CDS 60.0%
AGGGACAGCCTCCATCCCCA+GGG - chr7.1:15773861-15773880 None:intergenic 65.0%
ATGGCACCAACCCACCTGCG+AGG + chr7.1:15773750-15773769 MS.gene42511:CDS 65.0%
CCTAGGCTTGGCTGCCGTAC+CGG + chr7.1:15773878-15773897 MS.gene42511:CDS 65.0%
CGGTACGGCAGCCAAGCCTA+GGG - chr7.1:15773880-15773899 None:intergenic 65.0%
GTGGGGCCCACTTGGTTGGA+CGG + chr7.1:15774748-15774767 MS.gene42511:CDS 65.0%
TAGGGACAGCCTCCATCCCC+AGG - chr7.1:15773862-15773881 None:intergenic 65.0%
TGGGGATGGAGGCTGTCCCT+AGG + chr7.1:15773861-15773880 MS.gene42511:CDS 65.0%
CCGGTACGGCAGCCAAGCCT+AGG - chr7.1:15773881-15773900 None:intergenic 70.0%
GCACCAACCCACCTGCGAGG+AGG + chr7.1:15773753-15773772 MS.gene42511:CDS 70.0%
GGATGGTCGTGGGGCCCACT+TGG + chr7.1:15774740-15774759 MS.gene42511:CDS 70.0%
GGTCGTGGGGCCCACTTGGT+TGG + chr7.1:15774744-15774763 MS.gene42511:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 15773003 15775054 15773003 ID=MS.gene42511
chr7.1 mRNA 15773003 15775054 15773003 ID=MS.gene42511.t1;Parent=MS.gene42511
chr7.1 exon 15773003 15773305 15773003 ID=MS.gene42511.t1.exon1;Parent=MS.gene42511.t1
chr7.1 CDS 15773003 15773305 15773003 ID=cds.MS.gene42511.t1;Parent=MS.gene42511.t1
chr7.1 exon 15773726 15774352 15773726 ID=MS.gene42511.t1.exon2;Parent=MS.gene42511.t1
chr7.1 CDS 15773726 15774352 15773726 ID=cds.MS.gene42511.t1;Parent=MS.gene42511.t1
chr7.1 exon 15774632 15775054 15774632 ID=MS.gene42511.t1.exon3;Parent=MS.gene42511.t1
chr7.1 CDS 15774632 15775054 15774632 ID=cds.MS.gene42511.t1;Parent=MS.gene42511.t1
Gene Sequence

>MS.gene42511

ATGACTTCCTTGAAGAATTCTTCCCTGCTGTATACAGACAAAAAACAGCATGCACATGAAAACAATTACTGCAAGTACGACAACCAGGGCCTTGCGGCATTTACCTCTTCTCTATACATTGCCGGTTTAGTTGCATCCCTGATTGCATCTCCCATTACAAGGAAGTATGGACGTCGGGCAAGTATCATCACTGGTGGTAGTAGCTTTCTGATTGGATCAGCTCTGAATGCTTCAGCTGTTAACCTCACAATGCTGATCTTCGGCCGTGTTATGCTCGGCATTGGCATTGGATTTGGAAATCAGGTAATAACATATTTCTCTAATCTATCTATGATAAATCCTTAAGAGTGTTGGCCTATTGTGTCAAGTATCACCTACCTATGATGAATTCATGATCAATACTTAGCAGATAGAAACATTTTTTTCCTTTACTGGTTTAGAACAATGGTAATTTTTTCTATGAAAGGAGGAGGAAACTAATTTTGTTTCCTTCTTAAAACCCGTCTCTTGATTATCCAAACAAGTATCAAACAGTTTGAAGGGTGTTAAGTGTTAATTGTTAATAATAACAGCGTAAATGTTAATTTTAGTTCATAAAATTTACGGGAAAGGAAAGATAGTAATGTGATGGAAACAATTTATGTTTGAGTTAGAAGACAAATCGAGTTATACCTCAAAAGTTGACAAATTATTTGAGCTATTTCCCTCGTGCTTCTTTTGAAGGCAATTCCACTTTATTTGTCAGAGATGGCACCAACCCACCTGCGAGGAGGATTGAACATGATGTTTCAAGTGGCAACAACTTTTGGGATTTTCATAGCCAATATGATAAATTTTGGAACACAGAAGATTAAACCCTGGGGATGGAGGCTGTCCCTAGGCTTGGCTGCCGTACCGGCTCTTTTGATGACGATAGGAGGAATATTTCTTCCCGAGACTCCGAACAGCTTAATAGAACGAGGATTAGAAGAAAGGGGAAGGAAGCTCCTAGAGAAAATTAGAGGAACTAGCGATGTTGATGCAGAGTTTGAAGATATGGTTGATGCAAGCAAGTTGGCAAACTCAATAAAGCACCCGTTTCGTAACATACTCGAAAGAAGGTATAGGCCAGAGTTGGTGATGGCAATTGTCATGCCAACTTCACAAATCTTGACTGGCATTAATTCCATTCTCTTCTATGCTCCGGTGCTGTTTCAAAGCATGGGATTCGGTGGAGACGCTTCGCTCTACTCCTCGGCTTTGACTGGTGGCGTTCTTGCTTGCTCAACATTCATCTCCATTGCAACAGTTGATAAGCTGGGAAGGAGAGTTCTTCTTATCAGTGGTGGAATACAAATGATCATATGTCAGGTATGAAAAAATCTGTCTTAAACAAATTCTGATCATGTTTAAAAGATCCGTGCCATTAAGTTGGGAAATAATTCTAATCAACAGCTTAGAATACATACATTAAAATAATAGGAAAAAGGCAATAAGGTTTTCTTATAGTTATTTCATTATTCTTACTTACCCTCTATTTAGTTGTAATAAAAAACTATGTTCATACATGAATTAGTCTAATGCAGTAATGCTAGAATCGGAACAAAAATTGCAGGGTAACTTATTTTGTTTCATTTTTCACATGAGCAGGTTATAGTTGCAATTATTCTTGGGGTCAAGTTTGGGGATAACCAAGAACTGTCCAAAGGCTATTCAATATTGGTTGTAGTTGTGGTTTGCCTATTTGTTGTAGCATTTGGATGGTCGTGGGGCCCACTTGGTTGGACGGTTCCAAGTGAGATATTTCCATTAGAAATCCGTTCAGCAGGGCAGAGTATCACAGTATCTGTAAACCTTTTTTTCACTTTCGTAATTGCTCAGGCATTCCTTGCTCTTCTCTGCTCATTCAAGTTTGGAATCTTTCTCTTTTTCGCCGGCTGGATTACCCTCATGACCATATTTGTTGTTCTGTTCTTGCCTGAAACCAAAGGTATTCCCATTGAAGAGATGGCATTTATGTGGAGGAAGCATTGGTTCTGGAAATCTATATTGCCTGTAAACACATCACAGTAA
Protein sequence

>MS.gene42511.t1

MTSLKNSSLLYTDKKQHAHENNYCKYDNQGLAAFTSSLYIAGLVASLIASPITRKYGRRASIITGGSSFLIGSALNASAVNLTMLIFGRVMLGIGIGFGNQAIPLYLSEMAPTHLRGGLNMMFQVATTFGIFIANMINFGTQKIKPWGWRLSLGLAAVPALLMTIGGIFLPETPNSLIERGLEERGRKLLEKIRGTSDVDAEFEDMVDASKLANSIKHPFRNILERRYRPELVMAIVMPTSQILTGINSILFYAPVLFQSMGFGGDASLYSSALTGGVLACSTFISIATVDKLGRRVLLISGGIQMIICQVIVAIILGVKFGDNQELSKGYSILVVVVVCLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVSVNLFFTFVIAQAFLALLCSFKFGIFLFFAGWITLMTIFVVLFLPETKGIPIEEMAFMWRKHWFWKSILPVNTSQ