Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43244.t1 | PNY09053.1 | 81.7 | 360 | 31 | 2 | 1 | 326 | 1 | 359 | 6.40E-158 | 567.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43244.t1 | O81862 | 46.9 | 358 | 146 | 7 | 11 | 327 | 9 | 363 | 2.4e-76 | 287.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43244.t1 | A0A2K3P1D5 | 81.7 | 360 | 31 | 2 | 1 | 326 | 1 | 359 | 4.6e-158 | 567.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43244 | MS.gene40705 | PPI |
| MS.gene72023 | MS.gene43244 | PPI |
| MS.gene43244 | MS.gene041428 | PPI |
| MS.gene53841 | MS.gene43244 | PPI |
| MS.gene72022 | MS.gene43244 | PPI |
| MS.gene014610 | MS.gene43244 | PPI |
| MS.gene40706 | MS.gene43244 | PPI |
| MS.gene036626 | MS.gene43244 | PPI |
| MS.gene48549 | MS.gene43244 | PPI |
| MS.gene43244 | MS.gene72023 | PPI |
| MS.gene43244 | MS.gene40707 | PPI |
| MS.gene041428 | MS.gene43244 | PPI |
| MS.gene43244 | MS.gene021954 | PPI |
| MS.gene72024 | MS.gene43244 | PPI |
| MS.gene40256 | MS.gene43244 | PPI |
| MS.gene58750 | MS.gene43244 | PPI |
| MS.gene021944 | MS.gene43244 | PPI |
| MS.gene44679 | MS.gene43244 | PPI |
| MS.gene40257 | MS.gene43244 | PPI |
| MS.gene44682 | MS.gene43244 | PPI |
| MS.gene055584 | MS.gene43244 | PPI |
| MS.gene014609 | MS.gene43244 | PPI |
| MS.gene014611 | MS.gene43244 | PPI |
| MS.gene43244 | MS.gene57747 | PPI |
| MS.gene40255 | MS.gene43244 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43244.t1 | MTR_3g110320 | 73.333 | 360 | 61 | 2 | 1 | 326 | 1 | 359 | 0.0 | 527 |
| MS.gene43244.t1 | MTR_3g110280 | 76.731 | 361 | 48 | 3 | 1 | 326 | 1 | 360 | 0.0 | 526 |
| MS.gene43244.t1 | MTR_3g110320 | 72.853 | 361 | 63 | 2 | 1 | 327 | 1 | 360 | 0.0 | 525 |
| MS.gene43244.t1 | MTR_4g116920 | 75.346 | 361 | 38 | 5 | 1 | 326 | 1 | 345 | 0.0 | 511 |
| MS.gene43244.t1 | MTR_3g110260 | 90.435 | 115 | 11 | 0 | 331 | 445 | 116 | 230 | 8.02e-72 | 228 |
| MS.gene43244.t1 | MTR_1g013150 | 34.670 | 349 | 178 | 7 | 22 | 324 | 32 | 376 | 6.97e-55 | 188 |
| MS.gene43244.t1 | MTR_4g117020 | 34.604 | 341 | 174 | 11 | 30 | 326 | 27 | 362 | 2.87e-47 | 175 |
| MS.gene43244.t1 | MTR_4g117040 | 34.018 | 341 | 177 | 8 | 30 | 326 | 28 | 364 | 1.31e-46 | 173 |
| MS.gene43244.t1 | MTR_4g117000 | 30.973 | 339 | 187 | 8 | 29 | 323 | 34 | 369 | 2.45e-45 | 162 |
| MS.gene43244.t1 | MTR_4g117030 | 34.277 | 318 | 163 | 8 | 52 | 326 | 11 | 325 | 2.21e-44 | 166 |
| MS.gene43244.t1 | MTR_4g116990 | 33.051 | 354 | 183 | 10 | 29 | 332 | 36 | 385 | 1.93e-43 | 158 |
| MS.gene43244.t1 | MTR_8g061040 | 51.695 | 118 | 57 | 0 | 331 | 448 | 144 | 261 | 3.17e-41 | 151 |
| MS.gene43244.t1 | MTR_4g117800 | 31.835 | 267 | 142 | 6 | 30 | 285 | 28 | 265 | 3.29e-32 | 129 |
| MS.gene43244.t1 | MTR_8g014075 | 41.860 | 129 | 75 | 0 | 331 | 459 | 133 | 261 | 1.60e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43244.t1 | AT4G19810 | 48.045 | 358 | 142 | 7 | 11 | 327 | 9 | 363 | 2.01e-99 | 304 |
| MS.gene43244.t1 | AT4G19810 | 48.045 | 358 | 142 | 7 | 11 | 327 | 9 | 363 | 2.01e-99 | 304 |
| MS.gene43244.t1 | AT4G19820 | 43.175 | 359 | 160 | 7 | 10 | 327 | 6 | 361 | 2.21e-83 | 262 |
| MS.gene43244.t1 | AT4G19800 | 42.183 | 339 | 151 | 7 | 30 | 327 | 7 | 341 | 7.22e-78 | 249 |
| MS.gene43244.t1 | AT4G19750 | 40.563 | 355 | 160 | 10 | 20 | 328 | 4 | 353 | 3.35e-75 | 241 |
| MS.gene43244.t1 | AT4G19760 | 40.822 | 365 | 155 | 11 | 20 | 328 | 4 | 363 | 3.00e-74 | 238 |
| MS.gene43244.t1 | AT4G19720 | 39.826 | 344 | 159 | 7 | 30 | 327 | 6 | 347 | 6.22e-71 | 230 |
| MS.gene43244.t1 | AT4G19730 | 38.720 | 328 | 137 | 9 | 28 | 298 | 12 | 332 | 2.77e-57 | 193 |
| MS.gene43244.t1 | AT4G19770 | 37.402 | 254 | 119 | 4 | 114 | 327 | 1 | 254 | 1.87e-46 | 162 |
| MS.gene43244.t1 | AT3G18380 | 53.390 | 118 | 55 | 0 | 331 | 448 | 158 | 275 | 2.13e-40 | 149 |
| MS.gene43244.t1 | AT3G18380 | 58.252 | 103 | 43 | 0 | 331 | 433 | 158 | 260 | 6.51e-40 | 147 |
| MS.gene43244.t1 | AT3G18380 | 58.252 | 103 | 43 | 0 | 331 | 433 | 155 | 257 | 6.96e-40 | 147 |
| MS.gene43244.t1 | AT1G15215 | 40.000 | 175 | 83 | 2 | 271 | 445 | 104 | 256 | 7.66e-36 | 134 |
| MS.gene43244.t1 | AT1G15215 | 40.828 | 169 | 78 | 2 | 271 | 439 | 104 | 250 | 2.21e-35 | 133 |
| MS.gene43244.t1 | AT1G15215 | 56.311 | 103 | 45 | 0 | 331 | 433 | 142 | 244 | 6.68e-35 | 131 |
| MS.gene43244.t1 | AT4G19740 | 32.620 | 187 | 86 | 5 | 137 | 283 | 24 | 210 | 2.11e-18 | 84.3 |
Find 107 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGTTGAAGTTGTTATTTC+TGG | 0.110644 | 8.4:+19917630 | None:intergenic |
| TCGAAAATTTCATGGTTATT+AGG | 0.185988 | 8.4:+19917207 | None:intergenic |
| TTTGCAAAAGCTGAAATTAA+AGG | 0.186191 | 8.4:-19917952 | MS.gene43244:CDS |
| CCCCACCACCAATTGATAAA+AGG | 0.201667 | 8.4:+19917740 | None:intergenic |
| GAACATAGTCTCCAACTTTC+AGG | 0.226239 | 8.4:+19914199 | None:intergenic |
| AAATCAGAAGGTGGGTCTTT+TGG | 0.236363 | 8.4:-19913702 | MS.gene43244:CDS |
| GTTACTAATTATTGCTTCAT+AGG | 0.237729 | 8.4:-19917102 | MS.gene43244:CDS |
| GCCAAGCAAAATGGATTGTT+TGG | 0.270489 | 8.4:-19917024 | MS.gene43244:CDS |
| GTTGCTTATGCCAAGCAAAA+TGG | 0.325981 | 8.4:-19917033 | MS.gene43244:CDS |
| ATAAAGCTACGCAGGGGCTT+GGG | 0.332446 | 8.4:-19917185 | MS.gene43244:CDS |
| GACACAACCACCTGCTCCTT+TGG | 0.333539 | 8.4:-19917352 | MS.gene43244:CDS |
| AGAGTCAGATTTGTTGGGTT+TGG | 0.339869 | 8.4:-19914303 | MS.gene43244:CDS |
| ACCCAAGAGTCTAGCAGTTC+TGG | 0.345855 | 8.4:-19917523 | MS.gene43244:CDS |
| TAGCTTTATCGAAAATTTCA+TGG | 0.354157 | 8.4:+19917199 | None:intergenic |
| CGAAAGGAACCGAGTGTTCT+CGG | 0.359680 | 8.4:+19914241 | None:intergenic |
| TGCCAGAACTGCTAGACTCT+TGG | 0.370329 | 8.4:+19917521 | None:intergenic |
| AGACTATGTTCTGTGCTTCC+AGG | 0.376950 | 8.4:-19914187 | MS.gene43244:intron |
| ATATTGAACAAGACAGCAAC+TGG | 0.377045 | 8.4:-19916987 | MS.gene43244:CDS |
| ACAAGGATATAATAAATGTT+GGG | 0.382597 | 8.4:-19917152 | MS.gene43244:CDS |
| GATAAAGCTACGCAGGGGCT+TGG | 0.384459 | 8.4:-19917186 | MS.gene43244:CDS |
| GGATATCATGCATTCTCCTT+TGG | 0.394957 | 8.4:+19914035 | None:intergenic |
| ACTGGCTTGGCTAGCCATAT+TGG | 0.395681 | 8.4:+19917690 | None:intergenic |
| GAAGTCAGAGTCAGATTTGT+TGG | 0.404906 | 8.4:-19914309 | MS.gene43244:CDS |
| CTGCACTGAACTGGCCTGTC+GGG | 0.416012 | 8.4:+19917325 | None:intergenic |
| TGCATGATATCCGGGGTTGC+AGG | 0.416534 | 8.4:-19914024 | MS.gene43244:CDS |
| TGAACTACTCTTTGCCTGAA+TGG | 0.425900 | 8.4:+19917771 | None:intergenic |
| AAATGTGACACCTGCAACCC+CGG | 0.426063 | 8.4:+19914014 | None:intergenic |
| AAAGGAGAATGCATGATATC+CGG | 0.430863 | 8.4:-19914033 | MS.gene43244:CDS |
| ATTGCTTCATAGGGACAGAT+TGG | 0.433223 | 8.4:-19917092 | MS.gene43244:CDS |
| CAGTTGAAGGTATCACAAAA+TGG | 0.433232 | 8.4:-19917305 | MS.gene43244:CDS |
| TACCTTCAACTGCACTGAAC+TGG | 0.437558 | 8.4:+19917316 | None:intergenic |
| GCCAGAACTGCTAGACTCTT+GGG | 0.439126 | 8.4:+19917522 | None:intergenic |
| TCAACGGTCTTGATCTTGAC+TGG | 0.443365 | 8.4:-19917615 | MS.gene43244:CDS |
| TTACTAATTATTGCTTCATA+GGG | 0.446458 | 8.4:-19917101 | MS.gene43244:CDS |
| CTGAAATTAAAGGTGGCTAT+TGG | 0.446672 | 8.4:-19917942 | MS.gene43244:CDS |
| GTTTGATTCTTGTCGTATCC+AGG | 0.447995 | 8.4:+19913788 | None:intergenic |
| CCCACCACCAATTGATAAAA+GGG | 0.449578 | 8.4:+19917741 | None:intergenic |
| TATAATAAATGTTGGGGCGC+AGG | 0.450194 | 8.4:-19917145 | MS.gene43244:CDS |
| TCCAACAGTTTGCAGTTACC+TGG | 0.454630 | 8.4:-19913806 | MS.gene43244:CDS |
| GAAGGTATCACAAAATGGAT+TGG | 0.455257 | 8.4:-19917300 | MS.gene43244:CDS |
| TACAAGGATATAATAAATGT+TGG | 0.455760 | 8.4:-19917153 | MS.gene43244:CDS |
| CTTGGTTGGTATTAGAATCA+AGG | 0.461412 | 8.4:+19917842 | None:intergenic |
| GTCTTATCTGTGTCTGAGGA+TGG | 0.469222 | 8.4:+19917586 | None:intergenic |
| AGCTGCGTTTGCAGAAGAAA+TGG | 0.471700 | 8.4:+19917816 | None:intergenic |
| AAGTCAGAGTCAGATTTGTT+GGG | 0.473120 | 8.4:-19914308 | MS.gene43244:CDS |
| CAAGTGGGTGAAATAATAAG+AGG | 0.474865 | 8.4:+19917882 | None:intergenic |
| AAGGTATCACAAAATGGATT+GGG | 0.479422 | 8.4:-19917299 | MS.gene43244:CDS |
| TGTAATGAGTAAACTGAAGT+TGG | 0.483224 | 8.4:+19917564 | None:intergenic |
| ATCACAAAATGGATTGGGTC+AGG | 0.486091 | 8.4:-19917294 | MS.gene43244:CDS |
| GGCTATTGGTATTCTGATAG+TGG | 0.488891 | 8.4:-19917928 | MS.gene43244:CDS |
| AACTGGGCTCTTTCTCAAGC+AGG | 0.494078 | 8.4:-19916970 | MS.gene43244:intron |
| AAGGAGAATGCATGATATCC+GGG | 0.498460 | 8.4:-19914032 | MS.gene43244:CDS |
| GCACACAGATTTCTTAGCAC+AGG | 0.502053 | 8.4:-19914433 | MS.gene43244:CDS |
| CACACAGATTTCTTAGCACA+GGG | 0.505636 | 8.4:-19914432 | MS.gene43244:CDS |
| AAACTTCACTGAAACCATTC+AGG | 0.514927 | 8.4:-19917785 | MS.gene43244:CDS |
| GCATTGGGTGTACCTTTCTA+CGG | 0.516060 | 8.4:-19917252 | MS.gene43244:CDS |
| AGTTGTTATTTCTGGCAAGT+TGG | 0.519658 | 8.4:+19917638 | None:intergenic |
| ACTGCACTGAACTGGCCTGT+CGG | 0.523497 | 8.4:+19917324 | None:intergenic |
| CTCCACTTGTAACCGTAGAA+AGG | 0.524946 | 8.4:+19917240 | None:intergenic |
| GGCCAGTTCAGTGCAGTTGA+AGG | 0.526991 | 8.4:-19917318 | MS.gene43244:CDS |
| GCAATAATTAGTAACATATG+TGG | 0.528980 | 8.4:+19917110 | None:intergenic |
| TAAAGCTACGCAGGGGCTTG+GGG | 0.529107 | 8.4:-19917184 | MS.gene43244:CDS |
| TTGCTGTTATCTGCTGCAGT+GGG | 0.533126 | 8.4:-19917490 | MS.gene43244:intron |
| TCCAGGTAACTGCAAACTGT+TGG | 0.535870 | 8.4:+19913805 | None:intergenic |
| ATTTGTTGGGTTTGGAGCTG+AGG | 0.536262 | 8.4:-19914295 | MS.gene43244:CDS |
| CAACGGTCTTGATCTTGACT+GGG | 0.537755 | 8.4:-19917614 | MS.gene43244:CDS |
| TTGCTTGGCATAAGCAACCT+TGG | 0.538135 | 8.4:+19917038 | None:intergenic |
| GCAGCAGATAACAGCAAAGC+CGG | 0.552203 | 8.4:+19917496 | None:intergenic |
| GTCTAGCAGTTCTGGCAAGC+CGG | 0.554393 | 8.4:-19917515 | MS.gene43244:CDS |
| TACCTTTCTACGGTTACAAG+TGG | 0.556508 | 8.4:-19917242 | MS.gene43244:CDS |
| CTGCAAATGCACAGAACAAG+TGG | 0.562193 | 8.4:+19917866 | None:intergenic |
| GAGTGTTCCAACCTGAAAGT+TGG | 0.564740 | 8.4:-19914210 | MS.gene43244:CDS |
| GCAAAAGCTGAAATTAAAGG+TGG | 0.567212 | 8.4:-19917949 | MS.gene43244:CDS |
| ATAGTCTCCAACTTTCAGGT+TGG | 0.570305 | 8.4:+19914203 | None:intergenic |
| GCTTGGGGCTGTGAAGTACA+AGG | 0.578229 | 8.4:-19917169 | MS.gene43244:CDS |
| TAGAACATGTAGAAATCAGA+AGG | 0.581591 | 8.4:-19913714 | MS.gene43244:CDS |
| GCAGGTGGTTGTGTCGTGGT+TGG | 0.585458 | 8.4:+19917360 | None:intergenic |
| GCTCCTTTGGAAAACCCGAC+AGG | 0.587594 | 8.4:-19917339 | MS.gene43244:CDS |
| CACTCAGAGTATATCTGCCA+AGG | 0.587655 | 8.4:-19917055 | MS.gene43244:CDS |
| TTGCAGAAGAAATGGTGACT+TGG | 0.590390 | 8.4:+19917824 | None:intergenic |
| AAATTCAGTCCGAGAACACT+CGG | 0.592378 | 8.4:-19914250 | MS.gene43244:CDS |
| GAACACTCTGTGTTCTCGAA+AGG | 0.593253 | 8.4:+19914225 | None:intergenic |
| CTCACATTGTAGAGATCCAA+AGG | 0.594628 | 8.4:-19914051 | MS.gene43244:CDS |
| TGGAGCTGAGGAAGATGAGT+GGG | 0.595934 | 8.4:-19914283 | MS.gene43244:CDS |
| CAAGGATATAATAAATGTTG+GGG | 0.596445 | 8.4:-19917151 | MS.gene43244:CDS |
| AATTGCGCAGTAAATCATCC+AGG | 0.597737 | 8.4:+19913745 | None:intergenic |
| GTTGGTCTTATCTGTGTCTG+AGG | 0.600178 | 8.4:+19917582 | None:intergenic |
| AGAAGAAATGGTGACTTGGT+TGG | 0.609583 | 8.4:+19917828 | None:intergenic |
| TTCATAGGGACAGATTGGTA+TGG | 0.610823 | 8.4:-19917087 | MS.gene43244:CDS |
| ACATGTAGAAATCAGAAGGT+GGG | 0.611336 | 8.4:-19913710 | MS.gene43244:CDS |
| TTTGCTGTTATCTGCTGCAG+TGG | 0.614729 | 8.4:-19917491 | MS.gene43244:CDS |
| AACATGTAGAAATCAGAAGG+TGG | 0.618704 | 8.4:-19913711 | MS.gene43244:CDS |
| CGTGGAGGGTAGAAATCAAG+AGG | 0.629954 | 8.4:+19917998 | None:intergenic |
| GAGTTGAAGAATCACGTGGA+GGG | 0.630268 | 8.4:+19917984 | None:intergenic |
| AAGTGGGTGAAATAATAAGA+GGG | 0.630932 | 8.4:+19917883 | None:intergenic |
| GATCAATGTCAGAAACTGCA+AGG | 0.646791 | 8.4:+19917905 | None:intergenic |
| GCCAGAAATAACAACTTCAA+CGG | 0.646805 | 8.4:-19917631 | MS.gene43244:CDS |
| AGGAGCAGGTGGTTGTGTCG+TGG | 0.663999 | 8.4:+19917356 | None:intergenic |
| TTGGAGCTGAGGAAGATGAG+TGG | 0.671942 | 8.4:-19914284 | MS.gene43244:CDS |
| TATTGAACAAGACAGCAACT+GGG | 0.675280 | 8.4:-19916986 | MS.gene43244:CDS |
| TCAGTTTACTCATTACAGAG+TGG | 0.678345 | 8.4:-19917558 | MS.gene43244:CDS |
| TGCAAATGCACAGAACAAGT+GGG | 0.684809 | 8.4:+19917867 | None:intergenic |
| GGAGTTGAAGAATCACGTGG+AGG | 0.695107 | 8.4:+19917983 | None:intergenic |
| AGGAGAATGCATGATATCCG+GGG | 0.700543 | 8.4:-19914031 | MS.gene43244:CDS |
| ATATGATCACGACAACAATG+AGG | 0.732115 | 8.4:-19913984 | MS.gene43244:intron |
| ATTGGAGTTGAAGAATCACG+TGG | 0.732729 | 8.4:+19917980 | None:intergenic |
| ACACAGATTTCTTAGCACAG+GGG | 0.750555 | 8.4:-19914431 | MS.gene43244:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATACAACTTAAATAAA+CGG | + | chr8.4:19916982-19917001 | None:intergenic | 10.0% |
| !! | TACCAAAAAAAAAAAAAAAA+AGG | - | chr8.4:19915272-19915291 | MS.gene43244:intron | 10.0% |
| !!! | AATTAAAGTTTTTGTTAAAA+TGG | - | chr8.4:19915573-19915592 | MS.gene43244:intron | 10.0% |
| !!! | GTAATGTTTTTTTTTTTTTT+TGG | + | chr8.4:19916430-19916449 | None:intergenic | 10.0% |
| !!! | TTATTTCTTTTTTATATTCT+AGG | - | chr8.4:19917790-19917809 | MS.gene43244:CDS | 10.0% |
| !!! | TTTATCCTTTTTTATTTTAT+CGG | + | chr8.4:19916505-19916524 | None:intergenic | 10.0% |
| !! | AAATAGTAATGAAACAAAAT+AGG | - | chr8.4:19916596-19916615 | MS.gene43244:intron | 15.0% |
| !! | AATAATAAGAAATAAGAATG+AGG | - | chr8.4:19915035-19915054 | MS.gene43244:intron | 15.0% |
| !! | AATAGTAATGAAACAAAATA+GGG | - | chr8.4:19916597-19916616 | MS.gene43244:intron | 15.0% |
| !! | CAAAATTTAATGATATTAGT+TGG | + | chr8.4:19917120-19917139 | None:intergenic | 15.0% |
| !! | TTATGGTTTATAGTTAAAAT+TGG | + | chr8.4:19917037-19917056 | None:intergenic | 15.0% |
| !!! | AAACAAATTTTATTTTTGGA+AGG | + | chr8.4:19916540-19916559 | None:intergenic | 15.0% |
| !!! | ATTTTATTTAAGAAATGAAG+AGG | - | chr8.4:19916142-19916161 | MS.gene43244:intron | 15.0% |
| !!! | GACCTTTTTTTTTTTTTTTT+TGG | + | chr8.4:19915277-19915296 | None:intergenic | 15.0% |
| !!! | TTTTATTTAAGAAATGAAGA+GGG | - | chr8.4:19916143-19916162 | MS.gene43244:intron | 15.0% |
| !! | AAGATTATTTGACTAAAATC+TGG | - | chr8.4:19916947-19916966 | MS.gene43244:intron | 20.0% |
| !! | ACAAGGATATAATAAATGTT+GGG | - | chr8.4:19914560-19914579 | MS.gene43244:intron | 20.0% |
| !! | ATCTAATTGTAAAAACTTAC+AGG | + | chr8.4:19917309-19917328 | None:intergenic | 20.0% |
| !! | GAGAATCTCTAATAATAAAA+AGG | - | chr8.4:19915070-19915089 | MS.gene43244:intron | 20.0% |
| !! | GTTAACCGATAAAATAAAAA+AGG | - | chr8.4:19916497-19916516 | MS.gene43244:intron | 20.0% |
| !! | GTTGTATATATGTATATATG+TGG | - | chr8.4:19916991-19917010 | MS.gene43244:CDS | 20.0% |
| !! | TACAAGGATATAATAAATGT+TGG | - | chr8.4:19914559-19914578 | MS.gene43244:intron | 20.0% |
| !! | TTAATGATTAGATCAAGTAA+AGG | + | chr8.4:19915104-19915123 | None:intergenic | 20.0% |
| !! | TTACTAATTATTGCTTCATA+GGG | - | chr8.4:19914611-19914630 | MS.gene43244:intron | 20.0% |
| !! | TTTACTTGATCTAATCATTA+AGG | - | chr8.4:19915103-19915122 | MS.gene43244:intron | 20.0% |
| !!! | AGTTTTTGTTAAAATGGTTT+AGG | - | chr8.4:19915579-19915598 | MS.gene43244:intron | 20.0% |
| !!! | ATTCTTTTTCCTTGTAAATT+AGG | - | chr8.4:19915710-19915729 | MS.gene43244:intron | 20.0% |
| !!! | ATTTTTTAGCATGTATGATA+AGG | + | chr8.4:19916851-19916870 | None:intergenic | 20.0% |
| !!! | CATGACAATTTTTCTTTTAA+AGG | + | chr8.4:19916239-19916258 | None:intergenic | 20.0% |
| !!! | TCTTCTTTTATAACTATACA+TGG | - | chr8.4:19916910-19916929 | MS.gene43244:intron | 20.0% |
| !!! | TTTTAATGATATTCAATGTG+TGG | + | chr8.4:19915860-19915879 | None:intergenic | 20.0% |
| ! | AAAAAAACATTACTACTGTG+TGG | - | chr8.4:19916437-19916456 | MS.gene43244:intron | 25.0% |
| ! | AGTTCATAGACATCAATTAA+TGG | - | chr8.4:19915342-19915361 | MS.gene43244:intron | 25.0% |
| ! | ATACATGCTAAAAAATTGTG+AGG | - | chr8.4:19916855-19916874 | MS.gene43244:intron | 25.0% |
| ! | ATATTACAAACAACTTGGAT+TGG | - | chr8.4:19914287-19914306 | MS.gene43244:CDS | 25.0% |
| ! | ATCATTAAGGAAACTTATAC+TGG | - | chr8.4:19915116-19915135 | MS.gene43244:intron | 25.0% |
| ! | CAAGGATATAATAAATGTTG+GGG | - | chr8.4:19914561-19914580 | MS.gene43244:intron | 25.0% |
| ! | CCATAAAATAGATAGTCTAT+AGG | - | chr8.4:19917051-19917070 | MS.gene43244:CDS | 25.0% |
| ! | GCAATAATTAGTAACATATG+TGG | + | chr8.4:19914605-19914624 | None:intergenic | 25.0% |
| ! | GTAGTATTCAGTTAATTATC+TGG | - | chr8.4:19916796-19916815 | MS.gene43244:intron | 25.0% |
| ! | GTTACTAATTATTGCTTCAT+AGG | - | chr8.4:19914610-19914629 | MS.gene43244:intron | 25.0% |
| ! | TATAACTATACATGGAATCA+TGG | - | chr8.4:19916918-19916937 | MS.gene43244:intron | 25.0% |
| ! | TATTACAAACAACTTGGATT+GGG | - | chr8.4:19914288-19914307 | MS.gene43244:CDS | 25.0% |
| ! | TCGAAAATTTCATGGTTATT+AGG | + | chr8.4:19914508-19914527 | None:intergenic | 25.0% |
| ! | TTTGCAAAAGCTGAAATTAA+AGG | - | chr8.4:19913760-19913779 | MS.gene43244:CDS | 25.0% |
| !! | AAGAATCTATGAACGATTTT+CGG | + | chr8.4:19914050-19914069 | None:intergenic | 25.0% |
| !! | CCTATAGACTATCTATTTTA+TGG | + | chr8.4:19917054-19917073 | None:intergenic | 25.0% |
| !! | GTCATTTATATCTAAGATCT+TGG | + | chr8.4:19917848-19917867 | None:intergenic | 25.0% |
| !! | TATTTGGGATATATGATGTT+AGG | + | chr8.4:19915549-19915568 | None:intergenic | 25.0% |
| !!! | GAATGAATGTTTTTTTGAGT+AGG | + | chr8.4:19913695-19913714 | None:intergenic | 25.0% |
| !!! | GAGTTTTGAAAATCATTGAT+TGG | + | chr8.4:19917093-19917112 | None:intergenic | 25.0% |
| !!! | TAGCTTTATCGAAAATTTCA+TGG | + | chr8.4:19914516-19914535 | None:intergenic | 25.0% |
| !!! | TTTTGAAAATCATTGATTGG+AGG | + | chr8.4:19917090-19917109 | None:intergenic | 25.0% |
| AAAAGGAGAAACTGTTTAAG+CGG | + | chr8.4:19917377-19917396 | None:intergenic | 30.0% | |
| AAAATCTAATACACCCTACA+AGG | + | chr8.4:19917352-19917371 | None:intergenic | 30.0% | |
| AAATCTAATACACCCTACAA+GGG | + | chr8.4:19917351-19917370 | None:intergenic | 30.0% | |
| AAGTGGGTGAAATAATAAGA+GGG | + | chr8.4:19913832-19913851 | None:intergenic | 30.0% | |
| AGTGAGAAAACGACATATAA+TGG | - | chr8.4:19915409-19915428 | MS.gene43244:intron | 30.0% | |
| ATATCTCATTCTTCTCTTGT+AGG | - | chr8.4:19915653-19915672 | MS.gene43244:intron | 30.0% | |
| ATTGATTGGAGGAAGAAAAT+TGG | + | chr8.4:19917079-19917098 | None:intergenic | 30.0% | |
| ATTGGTGAATCCAGAAAAAA+TGG | + | chr8.4:19916770-19916789 | None:intergenic | 30.0% | |
| CAACGAAGCTATGTTTAATT+AGG | + | chr8.4:19914783-19914802 | None:intergenic | 30.0% | |
| CATGTATTTATGAAGTGACA+TGG | - | chr8.4:19915784-19915803 | MS.gene43244:intron | 30.0% | |
| GAAAAGAGAACAAAGATTGA+AGG | - | chr8.4:19914964-19914983 | MS.gene43244:intron | 30.0% | |
| GATGTCCTTTAATTGTTCTA+TGG | + | chr8.4:19917574-19917593 | None:intergenic | 30.0% | |
| TAGAACATGTAGAAATCAGA+AGG | - | chr8.4:19917998-19918017 | MS.gene43244:CDS | 30.0% | |
| TATGTCTACAATCCATTACT+AGG | + | chr8.4:19914934-19914953 | None:intergenic | 30.0% | |
| TCGAAAAGAAAAAAGACACA+AGG | - | chr8.4:19916191-19916210 | MS.gene43244:intron | 30.0% | |
| TGTAATGAGTAAACTGAAGT+TGG | + | chr8.4:19914151-19914170 | None:intergenic | 30.0% | |
| TTGGTGAATCCAGAAAAAAT+GGG | + | chr8.4:19916769-19916788 | None:intergenic | 30.0% | |
| ! | AAATCCCTTTTATCAATTGG+TGG | - | chr8.4:19913967-19913986 | MS.gene43244:intron | 30.0% |
| ! | AACAGTTTCTCCTTTTGTAA+AGG | - | chr8.4:19917381-19917400 | MS.gene43244:intron | 30.0% |
| ! | AAGGTATCACAAAATGGATT+GGG | - | chr8.4:19914413-19914432 | MS.gene43244:intron | 30.0% |
| ! | CATGTCACTTCATAAATACA+TGG | + | chr8.4:19915786-19915805 | None:intergenic | 30.0% |
| ! | GACAGTTTCAATGTGTTTTT+AGG | - | chr8.4:19917608-19917627 | MS.gene43244:CDS | 30.0% |
| ! | GATTGTTTGGATATTTTGCT+TGG | - | chr8.4:19914701-19914720 | MS.gene43244:intron | 30.0% |
| ! | GTGAAATCCCTTTTATCAAT+TGG | - | chr8.4:19913964-19913983 | MS.gene43244:intron | 30.0% |
| ! | TCACTTTAGGTAAAGCATTT+AGG | + | chr8.4:19915616-19915635 | None:intergenic | 30.0% |
| ! | TTAGGTAAAGCATTTAGGTT+GGG | + | chr8.4:19915611-19915630 | None:intergenic | 30.0% |
| ! | TTTAGGTAAAGCATTTAGGT+TGG | + | chr8.4:19915612-19915631 | None:intergenic | 30.0% |
| !!! | ATTATATGTCGTTTTCTCAC+TGG | + | chr8.4:19915410-19915429 | None:intergenic | 30.0% |
| !!! | TGGAATATTTTTAGCTTCAC+AGG | - | chr8.4:19915136-19915155 | MS.gene43244:intron | 30.0% |
| !!! | TTTCAATGTGTTTTTAGGAG+AGG | - | chr8.4:19917613-19917632 | MS.gene43244:CDS | 30.0% |
| AAAAAGACTACCATCATCAC+AGG | + | chr8.4:19915739-19915758 | None:intergenic | 35.0% | |
| AAAAGACTACCATCATCACA+GGG | + | chr8.4:19915738-19915757 | None:intergenic | 35.0% | |
| AAACTTCACTGAAACCATTC+AGG | - | chr8.4:19913927-19913946 | MS.gene43244:intron | 35.0% | |
| AAAGGAGAAACTGTTTAAGC+GGG | + | chr8.4:19917376-19917395 | None:intergenic | 35.0% | |
| AACATGTAGAAATCAGAAGG+TGG | - | chr8.4:19918001-19918020 | MS.gene43244:CDS | 35.0% | |
| AATCTAATACACCCTACAAG+GGG | + | chr8.4:19917350-19917369 | None:intergenic | 35.0% | |
| ACATGTAGAAATCAGAAGGT+GGG | - | chr8.4:19918002-19918021 | MS.gene43244:CDS | 35.0% | |
| ACTATACATGGAATCATGGA+TGG | - | chr8.4:19916922-19916941 | MS.gene43244:intron | 35.0% | |
| ACTCTGACTTCCTTTACAAA+AGG | + | chr8.4:19917394-19917413 | None:intergenic | 35.0% | |
| ACTGAATACTACAGCACAAT+TGG | + | chr8.4:19916788-19916807 | None:intergenic | 35.0% | |
| ATAGGGAGCGAGAATAAAAA+AGG | - | chr8.4:19916614-19916633 | MS.gene43244:intron | 35.0% | |
| ATATGATCACGACAACAATG+AGG | - | chr8.4:19917728-19917747 | MS.gene43244:CDS | 35.0% | |
| ATATTGAACAAGACAGCAAC+TGG | - | chr8.4:19914725-19914744 | MS.gene43244:intron | 35.0% | |
| CAAGTGGGTGAAATAATAAG+AGG | + | chr8.4:19913833-19913852 | None:intergenic | 35.0% | |
| CAGTTAATTATCTGGTGTTC+TGG | - | chr8.4:19916804-19916823 | MS.gene43244:intron | 35.0% | |
| CCAAAAAGCAAACTAGCATT+GGG | - | chr8.4:19914445-19914464 | MS.gene43244:CDS | 35.0% | |
| CCAAGTTGTTTGTAATATCC+TGG | + | chr8.4:19914285-19914304 | None:intergenic | 35.0% | |
| CCAGGATATTACAAACAACT+TGG | - | chr8.4:19914282-19914301 | MS.gene43244:CDS | 35.0% | |
| CCTCACCATAGAACAATTAA+AGG | - | chr8.4:19917566-19917585 | MS.gene43244:CDS | 35.0% | |
| CCTTTAATTGTTCTATGGTG+AGG | + | chr8.4:19917569-19917588 | None:intergenic | 35.0% | |
| CTGAAATTAAAGGTGGCTAT+TGG | - | chr8.4:19913770-19913789 | MS.gene43244:CDS | 35.0% | |
| CTGATTGTGAGTCATTCTAA+CGG | - | chr8.4:19914863-19914882 | MS.gene43244:intron | 35.0% | |
| GCAAAAGCTGAAATTAAAGG+TGG | - | chr8.4:19913763-19913782 | MS.gene43244:CDS | 35.0% | |
| GCCAGAAATAACAACTTCAA+CGG | - | chr8.4:19914081-19914100 | MS.gene43244:CDS | 35.0% | |
| GGCACAAAAATTTGCCAATA+TGG | - | chr8.4:19914008-19914027 | MS.gene43244:CDS | 35.0% | |
| TAGTCATAGACATACAGACA+CGG | - | chr8.4:19917158-19917177 | MS.gene43244:CDS | 35.0% | |
| TATTGAACAAGACAGCAACT+GGG | - | chr8.4:19914726-19914745 | MS.gene43244:intron | 35.0% | |
| TCAGTTTACTCATTACAGAG+TGG | - | chr8.4:19914154-19914173 | MS.gene43244:intron | 35.0% | |
| TCCAAAAAGCAAACTAGCAT+TGG | - | chr8.4:19914444-19914463 | MS.gene43244:CDS | 35.0% | |
| TGATTGTGAGTCATTCTAAC+GGG | - | chr8.4:19914864-19914883 | MS.gene43244:intron | 35.0% | |
| TTGTTGTCACAACCAAAATG+CGG | + | chr8.4:19917766-19917785 | None:intergenic | 35.0% | |
| ! | AAGTCAGAGTCAGATTTGTT+GGG | - | chr8.4:19917404-19917423 | MS.gene43244:intron | 35.0% |
| ! | AATTTTCGATAAAGCTACGC+AGG | - | chr8.4:19914519-19914538 | MS.gene43244:intron | 35.0% |
| ! | AGTTTCAGCTCTGATATAAC+TGG | - | chr8.4:19915210-19915229 | MS.gene43244:intron | 35.0% |
| ! | ATATCTAAGATCTTGGTCTG+TGG | + | chr8.4:19917841-19917860 | None:intergenic | 35.0% |
| ! | ATTTTCGACAATGACATCAG+TGG | - | chr8.4:19917182-19917201 | MS.gene43244:CDS | 35.0% |
| ! | ATTTTCGATAAAGCTACGCA+GGG | - | chr8.4:19914520-19914539 | MS.gene43244:intron | 35.0% |
| ! | CAGCTTTTGCAAAAGAGAAT+TGG | + | chr8.4:19913753-19913772 | None:intergenic | 35.0% |
| ! | CTTGGTTGGTATTAGAATCA+AGG | + | chr8.4:19913873-19913892 | None:intergenic | 35.0% |
| ! | GATAACTATCTGAGGTGAAA+AGG | + | chr8.4:19914333-19914352 | None:intergenic | 35.0% |
| ! | TCCAAACAATCCATTTTGCT+TGG | + | chr8.4:19914692-19914711 | None:intergenic | 35.0% |
| ! | TCTGACTTGAAGATCACTTT+AGG | + | chr8.4:19915629-19915648 | None:intergenic | 35.0% |
| ! | TTCTTTTTGACGTTCCAGTT+GGG | - | chr8.4:19917873-19917892 | MS.gene43244:CDS | 35.0% |
| ! | TTTCTTTTTGACGTTCCAGT+TGG | - | chr8.4:19917872-19917891 | MS.gene43244:CDS | 35.0% |
| ! | TTTTGCAGCTTCTCAAACAT+GGG | - | chr8.4:19914905-19914924 | MS.gene43244:intron | 35.0% |
| ! | TTTTTGCAGCTTCTCAAACA+TGG | - | chr8.4:19914904-19914923 | MS.gene43244:intron | 35.0% |
| !! | ACCGTTGAAGTTGTTATTTC+TGG | + | chr8.4:19914085-19914104 | None:intergenic | 35.0% |
| !! | AGTTGTTATTTCTGGCAAGT+TGG | + | chr8.4:19914077-19914096 | None:intergenic | 35.0% |
| !! | CAATTGACTTTTTGACTACC+TGG | - | chr8.4:19917949-19917968 | MS.gene43244:CDS | 35.0% |
| !! | CAGTTGAAGGTATCACAAAA+TGG | - | chr8.4:19914407-19914426 | MS.gene43244:intron | 35.0% |
| !! | GAAGGTATCACAAAATGGAT+TGG | - | chr8.4:19914412-19914431 | MS.gene43244:intron | 35.0% |
| !! | TAAGTCTAAAGTTTTGCTGC+AGG | - | chr8.4:19917228-19917247 | MS.gene43244:CDS | 35.0% |
| !! | TAGGTAAAGCATTTAGGTTG+GGG | + | chr8.4:19915610-19915629 | None:intergenic | 35.0% |
| !!! | TATTTTTAGCTTCACAGGCA+TGG | - | chr8.4:19915141-19915160 | MS.gene43244:intron | 35.0% |
| AAAAAAGGAGAAGCCCAAGT+GGG | - | chr8.4:19916629-19916648 | MS.gene43244:intron | 40.0% | |
| AAACTTTGGCCTAAATCACC+TGG | + | chr8.4:19917546-19917565 | None:intergenic | 40.0% | |
| AAATTCAGTCCGAGAACACT+CGG | - | chr8.4:19917462-19917481 | MS.gene43244:intron | 40.0% | |
| AATTGCGCAGTAAATCATCC+AGG | + | chr8.4:19917970-19917989 | None:intergenic | 40.0% | |
| ACACAGATTTCTTAGCACAG+GGG | - | chr8.4:19917281-19917300 | MS.gene43244:CDS | 40.0% | |
| ATTGCTTCATAGGGACAGAT+TGG | - | chr8.4:19914620-19914639 | MS.gene43244:intron | 40.0% | |
| ATTGGAGTTGAAGAATCACG+TGG | + | chr8.4:19913735-19913754 | None:intergenic | 40.0% | |
| CACACAGATTTCTTAGCACA+GGG | - | chr8.4:19917280-19917299 | MS.gene43244:CDS | 40.0% | |
| CAGAAGAATGTCTGTTCACA+AGG | + | chr8.4:19916473-19916492 | None:intergenic | 40.0% | |
| CCCACCACCAATTGATAAAA+GGG | + | chr8.4:19913974-19913993 | None:intergenic | 40.0% | |
| CTCACATTGTAGAGATCCAA+AGG | - | chr8.4:19917661-19917680 | MS.gene43244:CDS | 40.0% | |
| GAAAAAATGGGTCTGTTACG+AGG | + | chr8.4:19916757-19916776 | None:intergenic | 40.0% | |
| GAACATAGTCTCCAACTTTC+AGG | + | chr8.4:19917516-19917535 | None:intergenic | 40.0% | |
| GAAGTCAGAGTCAGATTTGT+TGG | - | chr8.4:19917403-19917422 | MS.gene43244:intron | 40.0% | |
| GATCAATGTCAGAAACTGCA+AGG | + | chr8.4:19913810-19913829 | None:intergenic | 40.0% | |
| GGCTATTGGTATTCTGATAG+TGG | - | chr8.4:19913784-19913803 | MS.gene43244:CDS | 40.0% | |
| GTGTCTGTATGTCTATGACT+AGG | + | chr8.4:19917159-19917178 | None:intergenic | 40.0% | |
| GTTCTATGGTGAGGAAACTT+TGG | + | chr8.4:19917560-19917579 | None:intergenic | 40.0% | |
| GTTGCTTATGCCAAGCAAAA+TGG | - | chr8.4:19914679-19914698 | MS.gene43244:intron | 40.0% | |
| GTTTGATTCTTGTCGTATCC+AGG | + | chr8.4:19917927-19917946 | None:intergenic | 40.0% | |
| TAAAAAAGGAGAAGCCCAAG+TGG | - | chr8.4:19916628-19916647 | MS.gene43244:intron | 40.0% | |
| TACCTTTCTACGGTTACAAG+TGG | - | chr8.4:19914470-19914489 | MS.gene43244:intron | 40.0% | |
| TATAATAAATGTTGGGGCGC+AGG | - | chr8.4:19914567-19914586 | MS.gene43244:intron | 40.0% | |
| TGAACTACTCTTTGCCTGAA+TGG | + | chr8.4:19913944-19913963 | None:intergenic | 40.0% | |
| TGCAAATGCACAGAACAAGT+GGG | + | chr8.4:19913848-19913867 | None:intergenic | 40.0% | |
| TGTTTGTAATATCCTGGCCT+GGG | + | chr8.4:19914279-19914298 | None:intergenic | 40.0% | |
| TTACTACTGTGTGGAGAAAC+CGG | - | chr8.4:19916446-19916465 | MS.gene43244:intron | 40.0% | |
| TTCATAGCTTTCCCCTTGTA+GGG | - | chr8.4:19917336-19917355 | MS.gene43244:CDS | 40.0% | |
| TTCATAGGGACAGATTGGTA+TGG | - | chr8.4:19914625-19914644 | MS.gene43244:intron | 40.0% | |
| TTGCAGAAGAAATGGTGACT+TGG | + | chr8.4:19913891-19913910 | None:intergenic | 40.0% | |
| TTGTTTGTAATATCCTGGCC+TGG | + | chr8.4:19914280-19914299 | None:intergenic | 40.0% | |
| ! | AAATCAGAAGGTGGGTCTTT+TGG | - | chr8.4:19918010-19918029 | MS.gene43244:CDS | 40.0% |
| ! | ATAGTCTCCAACTTTCAGGT+TGG | + | chr8.4:19917512-19917531 | None:intergenic | 40.0% |
| ! | CTTTGTTCTCTTTTCAGCAC+AGG | + | chr8.4:19914959-19914978 | None:intergenic | 40.0% |
| ! | TATGAACGATTTTCGGCTAC+TGG | + | chr8.4:19914043-19914062 | None:intergenic | 40.0% |
| ! | TCCCTTTTATCAATTGGTGG+TGG | - | chr8.4:19913970-19913989 | MS.gene43244:intron | 40.0% |
| ! | TGTGGTGTGTTTCAAGTGAA+AGG | - | chr8.4:19917009-19917028 | MS.gene43244:CDS | 40.0% |
| ! | TTTTCGATAAAGCTACGCAG+GGG | - | chr8.4:19914521-19914540 | MS.gene43244:intron | 40.0% |
| !! | AGAAGAAATGGTGACTTGGT+TGG | + | chr8.4:19913887-19913906 | None:intergenic | 40.0% |
| !! | AGAGTCAGATTTGTTGGGTT+TGG | - | chr8.4:19917409-19917428 | MS.gene43244:intron | 40.0% |
| !! | ATCACAAAATGGATTGGGTC+AGG | - | chr8.4:19914418-19914437 | MS.gene43244:intron | 40.0% |
| !! | CCCTTTTATCAATTGGTGGT+GGG | - | chr8.4:19913971-19913990 | MS.gene43244:intron | 40.0% |
| !! | GCCAAGCAAAATGGATTGTT+TGG | - | chr8.4:19914688-19914707 | MS.gene43244:intron | 40.0% |
| !! | TAAAGCATTTAGGTTGGGGA+GGG | + | chr8.4:19915606-19915625 | None:intergenic | 40.0% |
| !!! | CCCAATGCTAGTTTGCTTTT+TGG | + | chr8.4:19914448-19914467 | None:intergenic | 40.0% |
| !!! | CCTTTTATCAATTGGTGGTG+GGG | - | chr8.4:19913972-19913991 | MS.gene43244:intron | 40.0% |
| !!! | CGTAACAGACCCATTTTTTC+TGG | - | chr8.4:19916757-19916776 | MS.gene43244:intron | 40.0% |
| !!! | CTTTTATCAATTGGTGGTGG+GGG | - | chr8.4:19913973-19913992 | MS.gene43244:intron | 40.0% |
| !!! | TGGGTGTTATTTCCGCATTT+TGG | - | chr8.4:19917751-19917770 | MS.gene43244:CDS | 40.0% |
| AAACATGGGAGGCCTAGTAA+TGG | - | chr8.4:19914919-19914938 | MS.gene43244:intron | 45.0% | |
| AAACCCTTTCTCTTCCCACT+TGG | + | chr8.4:19916646-19916665 | None:intergenic | 45.0% | |
| AACCCTTTCTCTTCCCACTT+GGG | + | chr8.4:19916645-19916664 | None:intergenic | 45.0% | |
| AATTAGGTGCCCTGTGATGA+TGG | - | chr8.4:19915726-19915745 | MS.gene43244:intron | 45.0% | |
| ACAGGCATGGCAATCGTATA+TGG | - | chr8.4:19915154-19915173 | MS.gene43244:intron | 45.0% | |
| AGACTATGTTCTGTGCTTCC+AGG | - | chr8.4:19917525-19917544 | MS.gene43244:CDS | 45.0% | |
| AGCTGCGTTTGCAGAAGAAA+TGG | + | chr8.4:19913899-19913918 | None:intergenic | 45.0% | |
| AGGCATGGCAATCGTATATG+GGG | - | chr8.4:19915156-19915175 | MS.gene43244:intron | 45.0% | |
| CAACGGTCTTGATCTTGACT+GGG | - | chr8.4:19914098-19914117 | MS.gene43244:intron | 45.0% | |
| CACTCAGAGTATATCTGCCA+AGG | - | chr8.4:19914657-19914676 | MS.gene43244:intron | 45.0% | |
| CAGGCATGGCAATCGTATAT+GGG | - | chr8.4:19915155-19915174 | MS.gene43244:intron | 45.0% | |
| CCCCACCACCAATTGATAAA+AGG | + | chr8.4:19913975-19913994 | None:intergenic | 45.0% | |
| CGTGGTTGGATAACTATCTG+AGG | + | chr8.4:19914341-19914360 | None:intergenic | 45.0% | |
| CTCCACTTGTAACCGTAGAA+AGG | + | chr8.4:19914475-19914494 | None:intergenic | 45.0% | |
| CTGCAAATGCACAGAACAAG+TGG | + | chr8.4:19913849-19913868 | None:intergenic | 45.0% | |
| GAACACTCTGTGTTCTCGAA+AGG | + | chr8.4:19917490-19917509 | None:intergenic | 45.0% | |
| GAGTGTTCCAACCTGAAAGT+TGG | - | chr8.4:19917502-19917521 | MS.gene43244:CDS | 45.0% | |
| GAGTTGAAGAATCACGTGGA+GGG | + | chr8.4:19913731-19913750 | None:intergenic | 45.0% | |
| GATCACGACAACAATGAGGT+GGG | - | chr8.4:19917732-19917751 | MS.gene43244:CDS | 45.0% | |
| GCAATCGTATATGGGGATTG+TGG | - | chr8.4:19915163-19915182 | MS.gene43244:intron | 45.0% | |
| GCACACAGATTTCTTAGCAC+AGG | - | chr8.4:19917279-19917298 | MS.gene43244:CDS | 45.0% | |
| GCATTGGGTGTACCTTTCTA+CGG | - | chr8.4:19914460-19914479 | MS.gene43244:CDS | 45.0% | |
| GTCTTATCTGTGTCTGAGGA+TGG | + | chr8.4:19914129-19914148 | None:intergenic | 45.0% | |
| GTTCATAGCTTTCCCCTTGT+AGG | - | chr8.4:19917335-19917354 | MS.gene43244:CDS | 45.0% | |
| TACCTTCAACTGCACTGAAC+TGG | + | chr8.4:19914399-19914418 | None:intergenic | 45.0% | |
| TACTACTGTGTGGAGAAACC+GGG | - | chr8.4:19916447-19916466 | MS.gene43244:intron | 45.0% | |
| TCAACGGTCTTGATCTTGAC+TGG | - | chr8.4:19914097-19914116 | MS.gene43244:intron | 45.0% | |
| TCCAACAGTTTGCAGTTACC+TGG | - | chr8.4:19917906-19917925 | MS.gene43244:CDS | 45.0% | |
| TCCAGGTAACTGCAAACTGT+TGG | + | chr8.4:19917910-19917929 | None:intergenic | 45.0% | |
| TCTAGGAAAGAGTTCGCTTG+AGG | - | chr8.4:19917807-19917826 | MS.gene43244:CDS | 45.0% | |
| TCTGTGCTTCCAGGTGATTT+AGG | - | chr8.4:19917534-19917553 | MS.gene43244:CDS | 45.0% | |
| TGATCACGACAACAATGAGG+TGG | - | chr8.4:19917731-19917750 | MS.gene43244:CDS | 45.0% | |
| TTGCTTGGCATAAGCAACCT+TGG | + | chr8.4:19914677-19914696 | None:intergenic | 45.0% | |
| ! | ATTTGTTGGGTTTGGAGCTG+AGG | - | chr8.4:19917417-19917436 | MS.gene43244:intron | 45.0% |
| ! | CACAGGGCACCTAATTTACA+AGG | + | chr8.4:19915722-19915741 | None:intergenic | 45.0% |
| ! | TTGCTGTTATCTGCTGCAGT+GGG | - | chr8.4:19914222-19914241 | MS.gene43244:CDS | 45.0% |
| !! | GAGTTGAGTTGAGTTGACGA+TGG | - | chr8.4:19916720-19916739 | MS.gene43244:intron | 45.0% |
| !! | GTAAAGCATTTAGGTTGGGG+AGG | + | chr8.4:19915607-19915626 | None:intergenic | 45.0% |
| !! | GTTGGTCTTATCTGTGTCTG+AGG | + | chr8.4:19914133-19914152 | None:intergenic | 45.0% |
| !! | TTTGCTGTTATCTGCTGCAG+TGG | - | chr8.4:19914221-19914240 | MS.gene43244:CDS | 45.0% |
| !! | AATAATATTCAAATTTATAT+TGG | - | chr8.4:19916312-19916331 | MS.gene43244:intron | 5.0% |
| !!! | AAAACTTTAATTTATTTATT+TGG | + | chr8.4:19915565-19915584 | None:intergenic | 5.0% |
| !!! | AAACTTTAATTTATTTATTT+GGG | + | chr8.4:19915564-19915583 | None:intergenic | 5.0% |
| !!! | AAATAAATTTACAATTTTTT+TGG | - | chr8.4:19916354-19916373 | MS.gene43244:intron | 5.0% |
| !!! | AATAAATTTACAATTTTTTT+GGG | - | chr8.4:19916355-19916374 | MS.gene43244:intron | 5.0% |
| !!! | ATAAAAACAAATTTTATTTT+TGG | + | chr8.4:19916544-19916563 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTAAGAAATTAAA+AGG | - | chr8.4:19915998-19916017 | MS.gene43244:intron | 5.0% |
| AAATGTGACACCTGCAACCC+CGG | + | chr8.4:19917701-19917720 | None:intergenic | 50.0% | |
| AACTGGGCTCTTTCTCAAGC+AGG | - | chr8.4:19914742-19914761 | MS.gene43244:intron | 50.0% | |
| AAGCCCAAGTGGGAAGAGAA+AGG | - | chr8.4:19916639-19916658 | MS.gene43244:intron | 50.0% | |
| ACCCAAGAGTCTAGCAGTTC+TGG | - | chr8.4:19914189-19914208 | MS.gene43244:CDS | 50.0% | |
| AGCCCAAGTGGGAAGAGAAA+GGG | - | chr8.4:19916640-19916659 | MS.gene43244:intron | 50.0% | |
| ATAAAGCTACGCAGGGGCTT+GGG | - | chr8.4:19914527-19914546 | MS.gene43244:intron | 50.0% | |
| ATTGGAATACTACCCAGGCC+AGG | - | chr8.4:19914264-19914283 | MS.gene43244:CDS | 50.0% | |
| CGAAAGGAACCGAGTGTTCT+CGG | + | chr8.4:19917474-19917493 | None:intergenic | 50.0% | |
| CGTGGAGGGTAGAAATCAAG+AGG | + | chr8.4:19913717-19913736 | None:intergenic | 50.0% | |
| GAATGTCTGTTCACAAGGCC+CGG | + | chr8.4:19916468-19916487 | None:intergenic | 50.0% | |
| GCAGCAGATAACAGCAAAGC+CGG | + | chr8.4:19914219-19914238 | None:intergenic | 50.0% | |
| GCCAGAACTGCTAGACTCTT+GGG | + | chr8.4:19914193-19914212 | None:intergenic | 50.0% | |
| GCCTGGGTAGTATTCCAATG+GGG | + | chr8.4:19914263-19914282 | None:intergenic | 50.0% | |
| GGAGTTGAAGAATCACGTGG+AGG | + | chr8.4:19913732-19913751 | None:intergenic | 50.0% | |
| GGCCTGGGTAGTATTCCAAT+GGG | + | chr8.4:19914264-19914283 | None:intergenic | 50.0% | |
| TCCCCATTGGAATACTACCC+AGG | - | chr8.4:19914259-19914278 | MS.gene43244:CDS | 50.0% | |
| TGCAGCTTCTCAAACATGGG+AGG | - | chr8.4:19914908-19914927 | MS.gene43244:intron | 50.0% | |
| TGCCAGAACTGCTAGACTCT+TGG | + | chr8.4:19914194-19914213 | None:intergenic | 50.0% | |
| TGGAAAGCTGCATACCCAAC+TGG | + | chr8.4:19917890-19917909 | None:intergenic | 50.0% | |
| TGGAGCTGAGGAAGATGAGT+GGG | - | chr8.4:19917429-19917448 | MS.gene43244:intron | 50.0% | |
| TGGCCTGGGTAGTATTCCAA+TGG | + | chr8.4:19914265-19914284 | None:intergenic | 50.0% | |
| TTGGAGCTGAGGAAGATGAG+TGG | - | chr8.4:19917428-19917447 | MS.gene43244:intron | 50.0% | |
| !! | ACGATTTTCGGCTACTGGCT+TGG | + | chr8.4:19914038-19914057 | None:intergenic | 50.0% |
| !! | ACTGGCTTGGCTAGCCATAT+TGG | + | chr8.4:19914025-19914044 | None:intergenic | 50.0% |
| !! | TTATCAATTGGTGGTGGGGG+TGG | - | chr8.4:19913976-19913995 | MS.gene43244:intron | 50.0% |
| CTGTTATCTGCTGCAGTGGG+TGG | - | chr8.4:19914225-19914244 | MS.gene43244:CDS | 55.0% | |
| GACACAACCACCTGCTCCTT+TGG | - | chr8.4:19914360-19914379 | MS.gene43244:intron | 55.0% | |
| GATAAAGCTACGCAGGGGCT+TGG | - | chr8.4:19914526-19914545 | MS.gene43244:intron | 55.0% | |
| GCTTGGGGCTGTGAAGTACA+AGG | - | chr8.4:19914543-19914562 | MS.gene43244:intron | 55.0% | |
| GGCCAGTTCAGTGCAGTTGA+AGG | - | chr8.4:19914394-19914413 | MS.gene43244:intron | 55.0% | |
| GGGCTCTTTCTCAAGCAGGT+GGG | - | chr8.4:19914746-19914765 | MS.gene43244:intron | 55.0% | |
| TAAAGCTACGCAGGGGCTTG+GGG | - | chr8.4:19914528-19914547 | MS.gene43244:intron | 55.0% | |
| TGCATGATATCCGGGGTTGC+AGG | - | chr8.4:19917688-19917707 | MS.gene43244:CDS | 55.0% | |
| TGGGCTCTTTCTCAAGCAGG+TGG | - | chr8.4:19914745-19914764 | MS.gene43244:intron | 55.0% | |
| ! | ACTGCACTGAACTGGCCTGT+CGG | + | chr8.4:19914391-19914410 | None:intergenic | 55.0% |
| ! | GCTCCTTTGGAAAACCCGAC+AGG | - | chr8.4:19914373-19914392 | MS.gene43244:intron | 55.0% |
| ! | GGGTTTTCCAAAGGAGCAGG+TGG | + | chr8.4:19914370-19914389 | None:intergenic | 55.0% |
| ! | GTCGGGTTTTCCAAAGGAGC+AGG | + | chr8.4:19914373-19914392 | None:intergenic | 55.0% |
| ! | GTCTAGCAGTTCTGGCAAGC+CGG | - | chr8.4:19914197-19914216 | MS.gene43244:CDS | 55.0% |
| ! | TGGCCTGTCGGGTTTTCCAA+AGG | + | chr8.4:19914379-19914398 | None:intergenic | 55.0% |
| ! | TGGTGGGGGTGGTTCTACTT+TGG | - | chr8.4:19913987-19914006 | MS.gene43244:CDS | 55.0% |
| AGGAGCAGGTGGTTGTGTCG+TGG | + | chr8.4:19914359-19914378 | None:intergenic | 60.0% | |
| GCAGGTGGTTGTGTCGTGGT+TGG | + | chr8.4:19914355-19914374 | None:intergenic | 60.0% | |
| GGCTCAGATCAGCTCCCCAT+TGG | - | chr8.4:19914246-19914265 | MS.gene43244:CDS | 60.0% | |
| ! | CTGCACTGAACTGGCCTGTC+GGG | + | chr8.4:19914390-19914409 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 19913688 | 19918046 | 19913688 | ID=MS.gene43244 |
| chr8.4 | mRNA | 19913688 | 19918046 | 19913688 | ID=MS.gene43244.t1;Parent=MS.gene43244 |
| chr8.4 | exon | 19917491 | 19918046 | 19917491 | ID=MS.gene43244.t1.exon1;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19917491 | 19918046 | 19917491 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| chr8.4 | exon | 19916971 | 19917390 | 19916971 | ID=MS.gene43244.t1.exon2;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19916971 | 19917390 | 19916971 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| chr8.4 | exon | 19914426 | 19914484 | 19914426 | ID=MS.gene43244.t1.exon3;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19914426 | 19914484 | 19914426 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| chr8.4 | exon | 19914188 | 19914331 | 19914188 | ID=MS.gene43244.t1.exon4;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19914188 | 19914331 | 19914188 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| chr8.4 | exon | 19913985 | 19914104 | 19913985 | ID=MS.gene43244.t1.exon5;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19913985 | 19914104 | 19913985 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| chr8.4 | exon | 19913688 | 19913843 | 19913688 | ID=MS.gene43244.t1.exon6;Parent=MS.gene43244.t1 |
| chr8.4 | CDS | 19913688 | 19913843 | 19913688 | ID=cds.MS.gene43244.t1;Parent=MS.gene43244.t1 |
| Gene Sequence |
| Protein sequence |
