Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43468.t1 | XP_013458699.1 | 90.7 | 386 | 3 | 3 | 57 | 413 | 53 | 434 | 6.50E-127 | 464.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43468.t1 | Q9ZVP8 | 74.1 | 162 | 15 | 1 | 57 | 191 | 50 | 211 | 3.9e-64 | 246.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43468.t1 | A0A072UTQ9 | 90.7 | 386 | 3 | 3 | 57 | 413 | 53 | 434 | 4.7e-127 | 464.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene43468.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene43468 | 0.830946 | 2.21E-55 | -1.69E-46 |
| MS.gene049173 | MS.gene43468 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene43468 | 0.837847 | 4.08E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene43468 | 0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene43468 | 0.828085 | 1.09E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene43468 | 0.832652 | 8.37E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene43468 | 0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene43468 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene43468 | 0.839682 | 1.37E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene43468 | 0.802639 | 5.10E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene43468 | 0.852362 | 4.85E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene43468 | 0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene43468 | 0.812807 | 3.52E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene43468 | 0.820822 | 5.60E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene43468 | 0.816447 | 5.50E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene43468 | 0.824062 | 9.89E-54 | -1.69E-46 |
| MS.gene052129 | MS.gene43468 | -0.810264 | 1.26E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene43468 | 0.811057 | 8.47E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene43468 | 0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene43468 | 0.828216 | 1.02E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene43468 | 0.840501 | 8.37E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene43468 | 0.818953 | 1.50E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene43468 | 0.820995 | 5.11E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene43468 | 0.864214 | 1.43E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene43468 | 0.826428 | 2.73E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene43468 | 0.866051 | 3.78E-65 | -1.69E-46 |
| MS.gene055776 | MS.gene43468 | 0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene43468 | 0.828273 | 9.85E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene43468 | 0.829468 | 5.06E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene43468 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene43468 | 0.831806 | 1.35E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene43468 | 0.826624 | 2.45E-54 | -1.69E-46 |
| MS.gene05753 | MS.gene43468 | 0.809619 | 1.73E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene43468 | 0.816992 | 4.15E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene43468 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene43468 | 0.825737 | 3.98E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene43468 | 0.828193 | 1.03E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene43468 | 0.809198 | 2.13E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene43468 | 0.813445 | 2.55E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene43468 | 0.82999 | 3.78E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene43468 | 0.826037 | 3.38E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene43468 | 0.839095 | 1.94E-57 | -1.69E-46 |
| MS.gene059756 | MS.gene43468 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene43468 | 0.805386 | 1.37E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene43468 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene43468 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene43468 | 0.826542 | 2.56E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene43468 | 0.814676 | 1.36E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene43468 | 0.831885 | 1.30E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene43468 | 0.850304 | 1.85E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43468.t1 | MTR_4g134460 | 87.416 | 445 | 13 | 6 | 1 | 413 | 1 | 434 | 0.0 | 724 |
| MS.gene43468.t1 | MTR_6g011860 | 44.910 | 167 | 54 | 3 | 51 | 179 | 8 | 174 | 2.31e-42 | 153 |
| MS.gene43468.t1 | MTR_5g040420 | 42.365 | 203 | 75 | 6 | 49 | 213 | 5 | 203 | 2.39e-42 | 153 |
| MS.gene43468.t1 | MTR_8g467490 | 47.239 | 163 | 47 | 5 | 55 | 178 | 11 | 173 | 7.67e-42 | 152 |
| MS.gene43468.t1 | MTR_4g075980 | 46.711 | 152 | 49 | 3 | 57 | 179 | 14 | 162 | 1.23e-41 | 149 |
| MS.gene43468.t1 | MTR_5g090970 | 38.406 | 276 | 109 | 10 | 43 | 262 | 3 | 273 | 2.22e-41 | 149 |
| MS.gene43468.t1 | MTR_5g090970 | 38.628 | 277 | 108 | 11 | 43 | 262 | 3 | 274 | 1.39e-40 | 146 |
| MS.gene43468.t1 | MTR_8g059170 | 49.333 | 150 | 44 | 4 | 60 | 178 | 16 | 164 | 5.35e-38 | 140 |
| MS.gene43468.t1 | MTR_2g080010 | 43.713 | 167 | 53 | 4 | 60 | 185 | 17 | 183 | 1.39e-37 | 139 |
| MS.gene43468.t1 | MTR_3g088110 | 47.500 | 160 | 49 | 5 | 60 | 186 | 9 | 166 | 1.63e-37 | 138 |
| MS.gene43468.t1 | MTR_2157s0010 | 45.342 | 161 | 48 | 4 | 60 | 180 | 10 | 170 | 2.37e-37 | 137 |
| MS.gene43468.t1 | MTR_6g477900 | 47.059 | 153 | 49 | 4 | 60 | 181 | 8 | 159 | 2.43e-37 | 136 |
| MS.gene43468.t1 | MTR_2g079990 | 47.134 | 157 | 49 | 5 | 60 | 185 | 18 | 171 | 2.98e-37 | 139 |
| MS.gene43468.t1 | MTR_8g094580 | 45.455 | 154 | 49 | 3 | 60 | 180 | 9 | 160 | 8.14e-37 | 135 |
| MS.gene43468.t1 | MTR_2g093810 | 42.021 | 188 | 67 | 7 | 60 | 206 | 16 | 202 | 1.82e-36 | 136 |
| MS.gene43468.t1 | MTR_5g041940 | 44.643 | 168 | 50 | 7 | 60 | 186 | 5 | 170 | 2.25e-36 | 134 |
| MS.gene43468.t1 | MTR_7g085220 | 39.604 | 202 | 68 | 6 | 60 | 218 | 10 | 200 | 2.37e-36 | 136 |
| MS.gene43468.t1 | MTR_4g089135 | 41.304 | 184 | 55 | 5 | 55 | 185 | 12 | 195 | 2.65e-36 | 136 |
| MS.gene43468.t1 | MTR_3g096920 | 47.059 | 153 | 47 | 4 | 60 | 180 | 9 | 159 | 3.88e-36 | 134 |
| MS.gene43468.t1 | MTR_4g081870 | 45.395 | 152 | 49 | 5 | 60 | 178 | 11 | 161 | 9.12e-36 | 132 |
| MS.gene43468.t1 | MTR_2g068880 | 32.997 | 297 | 115 | 10 | 45 | 294 | 14 | 273 | 1.30e-35 | 133 |
| MS.gene43468.t1 | MTR_2g064090 | 44.371 | 151 | 51 | 3 | 60 | 178 | 8 | 157 | 4.48e-35 | 132 |
| MS.gene43468.t1 | MTR_2g079990 | 53.600 | 125 | 30 | 3 | 60 | 157 | 18 | 141 | 7.38e-35 | 133 |
| MS.gene43468.t1 | MTR_3g064580 | 45.455 | 154 | 51 | 4 | 60 | 181 | 8 | 160 | 8.22e-35 | 136 |
| MS.gene43468.t1 | MTR_3g096920 | 48.252 | 143 | 45 | 3 | 60 | 175 | 9 | 149 | 1.10e-34 | 131 |
| MS.gene43468.t1 | MTR_2g068920 | 43.820 | 178 | 50 | 6 | 45 | 178 | 14 | 185 | 1.19e-34 | 130 |
| MS.gene43468.t1 | MTR_6g084430 | 43.590 | 156 | 54 | 4 | 60 | 185 | 7 | 158 | 1.86e-34 | 130 |
| MS.gene43468.t1 | MTR_7g100990 | 43.373 | 166 | 60 | 4 | 49 | 180 | 2 | 167 | 2.19e-34 | 130 |
| MS.gene43468.t1 | MTR_5g076850 | 46.405 | 153 | 50 | 4 | 60 | 181 | 8 | 159 | 4.53e-34 | 134 |
| MS.gene43468.t1 | MTR_3g109340 | 42.581 | 155 | 61 | 3 | 54 | 180 | 18 | 172 | 6.15e-34 | 130 |
| MS.gene43468.t1 | MTR_2g062730 | 42.105 | 152 | 58 | 2 | 57 | 178 | 9 | 160 | 8.30e-34 | 129 |
| MS.gene43468.t1 | MTR_4g108760 | 41.667 | 180 | 63 | 7 | 43 | 186 | 4 | 177 | 8.94e-34 | 129 |
| MS.gene43468.t1 | MTR_6g012670 | 44.805 | 154 | 51 | 5 | 60 | 181 | 22 | 173 | 1.03e-33 | 128 |
| MS.gene43468.t1 | MTR_2g078700 | 44.737 | 152 | 52 | 4 | 60 | 179 | 25 | 176 | 1.68e-33 | 129 |
| MS.gene43468.t1 | MTR_3g435150 | 41.071 | 168 | 64 | 5 | 43 | 179 | 4 | 167 | 4.45e-33 | 126 |
| MS.gene43468.t1 | MTR_3g116070 | 39.267 | 191 | 74 | 6 | 60 | 213 | 25 | 210 | 7.02e-33 | 127 |
| MS.gene43468.t1 | MTR_5g069030 | 46.309 | 149 | 48 | 4 | 61 | 178 | 28 | 175 | 9.60e-33 | 130 |
| MS.gene43468.t1 | MTR_8g094580 | 52.778 | 108 | 43 | 2 | 79 | 180 | 1 | 106 | 1.59e-32 | 123 |
| MS.gene43468.t1 | MTR_3g109340 | 42.308 | 156 | 61 | 4 | 54 | 180 | 18 | 173 | 2.70e-32 | 125 |
| MS.gene43468.t1 | MTR_4g101680 | 41.722 | 151 | 57 | 3 | 58 | 178 | 7 | 156 | 4.88e-32 | 125 |
| MS.gene43468.t1 | MTR_1g097300 | 43.137 | 153 | 55 | 3 | 59 | 180 | 20 | 171 | 6.26e-32 | 127 |
| MS.gene43468.t1 | MTR_3g093050 | 44.295 | 149 | 51 | 4 | 61 | 178 | 25 | 172 | 1.37e-31 | 127 |
| MS.gene43468.t1 | MTR_3g093050 | 44.295 | 149 | 51 | 4 | 61 | 178 | 25 | 172 | 1.68e-31 | 127 |
| MS.gene43468.t1 | MTR_4g036030 | 41.722 | 151 | 57 | 3 | 58 | 178 | 7 | 156 | 2.41e-31 | 122 |
| MS.gene43468.t1 | MTR_4g035590 | 39.610 | 154 | 61 | 3 | 58 | 181 | 8 | 159 | 3.17e-31 | 122 |
| MS.gene43468.t1 | MTR_1g008740 | 39.053 | 169 | 72 | 5 | 49 | 186 | 4 | 172 | 3.28e-31 | 122 |
| MS.gene43468.t1 | MTR_5g014300 | 43.506 | 154 | 51 | 5 | 60 | 178 | 8 | 160 | 3.38e-31 | 122 |
| MS.gene43468.t1 | MTR_1g008740 | 40.244 | 164 | 67 | 5 | 54 | 186 | 23 | 186 | 4.74e-31 | 122 |
| MS.gene43468.t1 | MTR_5g012080 | 41.176 | 153 | 57 | 4 | 58 | 178 | 7 | 158 | 6.62e-31 | 121 |
| MS.gene43468.t1 | MTR_2g064470 | 33.333 | 273 | 128 | 9 | 60 | 291 | 13 | 272 | 1.16e-30 | 120 |
| MS.gene43468.t1 | MTR_4g098630 | 44.737 | 152 | 51 | 4 | 60 | 178 | 8 | 159 | 8.25e-30 | 117 |
| MS.gene43468.t1 | MTR_5g021710 | 40.127 | 157 | 63 | 3 | 52 | 178 | 2 | 157 | 8.80e-30 | 118 |
| MS.gene43468.t1 | MTR_1g069805 | 37.745 | 204 | 79 | 7 | 60 | 218 | 12 | 212 | 1.05e-29 | 116 |
| MS.gene43468.t1 | MTR_1g096430 | 41.026 | 156 | 53 | 5 | 57 | 178 | 6 | 156 | 1.65e-29 | 117 |
| MS.gene43468.t1 | MTR_7g105170 | 37.576 | 165 | 61 | 3 | 56 | 179 | 2 | 165 | 2.34e-29 | 115 |
| MS.gene43468.t1 | MTR_3g070030 | 35.745 | 235 | 83 | 8 | 61 | 242 | 22 | 241 | 2.40e-29 | 117 |
| MS.gene43468.t1 | MTR_3g093040 | 36.548 | 197 | 88 | 7 | 15 | 178 | 66 | 258 | 3.84e-29 | 115 |
| MS.gene43468.t1 | MTR_7g005280 | 41.667 | 168 | 69 | 5 | 60 | 200 | 17 | 182 | 6.94e-29 | 114 |
| MS.gene43468.t1 | MTR_1g090723 | 39.216 | 153 | 60 | 4 | 60 | 180 | 10 | 161 | 8.33e-29 | 119 |
| MS.gene43468.t1 | MTR_8g024480 | 38.889 | 162 | 57 | 4 | 58 | 178 | 15 | 175 | 8.49e-29 | 117 |
| MS.gene43468.t1 | MTR_7g085260 | 40.523 | 153 | 57 | 4 | 60 | 178 | 19 | 171 | 8.52e-29 | 116 |
| MS.gene43468.t1 | MTR_6g032770 | 41.958 | 143 | 46 | 4 | 61 | 175 | 21 | 154 | 8.70e-29 | 116 |
| MS.gene43468.t1 | MTR_4g052620 | 36.181 | 199 | 83 | 6 | 55 | 209 | 2 | 200 | 9.71e-29 | 113 |
| MS.gene43468.t1 | MTR_3g096140 | 37.975 | 158 | 66 | 4 | 54 | 180 | 3 | 159 | 1.00e-28 | 114 |
| MS.gene43468.t1 | MTR_2g086690 | 40.252 | 159 | 57 | 3 | 60 | 180 | 6 | 164 | 1.21e-28 | 113 |
| MS.gene43468.t1 | MTR_8g063550 | 36.538 | 156 | 63 | 5 | 58 | 180 | 6 | 158 | 1.33e-28 | 115 |
| MS.gene43468.t1 | MTR_1g090720 | 42.857 | 161 | 54 | 4 | 58 | 181 | 42 | 201 | 1.35e-28 | 117 |
| MS.gene43468.t1 | MTR_8g076110 | 41.060 | 151 | 58 | 3 | 58 | 178 | 6 | 155 | 1.59e-28 | 114 |
| MS.gene43468.t1 | MTR_8g063550 | 36.538 | 156 | 63 | 5 | 58 | 180 | 6 | 158 | 1.89e-28 | 116 |
| MS.gene43468.t1 | MTR_8g063550 | 36.538 | 156 | 63 | 5 | 58 | 180 | 6 | 158 | 2.00e-28 | 116 |
| MS.gene43468.t1 | MTR_8g099750 | 43.671 | 158 | 54 | 6 | 60 | 182 | 16 | 173 | 3.06e-28 | 111 |
| MS.gene43468.t1 | MTR_3g096140 | 37.975 | 158 | 66 | 4 | 54 | 180 | 3 | 159 | 3.19e-28 | 114 |
| MS.gene43468.t1 | MTR_7g097090 | 43.151 | 146 | 51 | 4 | 60 | 176 | 12 | 154 | 4.93e-28 | 112 |
| MS.gene43468.t1 | MTR_8g093580 | 35.256 | 156 | 65 | 5 | 58 | 180 | 6 | 158 | 1.76e-27 | 114 |
| MS.gene43468.t1 | MTR_1g090723 | 38.158 | 152 | 62 | 4 | 60 | 180 | 10 | 160 | 2.25e-27 | 114 |
| MS.gene43468.t1 | MTR_1g090723 | 38.158 | 152 | 62 | 4 | 60 | 180 | 10 | 160 | 2.79e-27 | 114 |
| MS.gene43468.t1 | MTR_0036s0150 | 38.816 | 152 | 61 | 4 | 60 | 180 | 7 | 157 | 3.12e-27 | 114 |
| MS.gene43468.t1 | MTR_7g011130 | 37.037 | 162 | 57 | 3 | 61 | 178 | 22 | 182 | 4.76e-27 | 110 |
| MS.gene43468.t1 | MTR_7g011120 | 37.821 | 156 | 58 | 3 | 61 | 178 | 11 | 165 | 1.46e-26 | 108 |
| MS.gene43468.t1 | MTR_2g086880 | 42.857 | 126 | 43 | 3 | 58 | 155 | 18 | 142 | 9.35e-25 | 107 |
| MS.gene43468.t1 | MTR_2g086880 | 42.857 | 126 | 43 | 3 | 58 | 155 | 18 | 142 | 1.05e-24 | 106 |
| MS.gene43468.t1 | MTR_3g098810 | 38.889 | 162 | 61 | 5 | 60 | 183 | 16 | 177 | 2.46e-23 | 98.2 |
| MS.gene43468.t1 | MTR_8g023840 | 38.854 | 157 | 54 | 7 | 53 | 175 | 7 | 155 | 4.91e-23 | 100 |
| MS.gene43468.t1 | MTR_3g096140 | 43.396 | 106 | 57 | 2 | 77 | 180 | 34 | 138 | 1.28e-22 | 98.2 |
| MS.gene43468.t1 | MTR_7g070140 | 51.136 | 88 | 42 | 1 | 84 | 170 | 17 | 104 | 3.73e-22 | 92.0 |
| MS.gene43468.t1 | MTR_3g098810 | 43.651 | 126 | 43 | 3 | 60 | 157 | 16 | 141 | 8.18e-22 | 92.0 |
| MS.gene43468.t1 | MTR_3g070040 | 33.621 | 232 | 88 | 9 | 62 | 242 | 12 | 228 | 1.85e-20 | 92.0 |
| MS.gene43468.t1 | MTR_8g023860 | 35.099 | 151 | 63 | 4 | 56 | 175 | 10 | 156 | 3.78e-20 | 92.0 |
| MS.gene43468.t1 | MTR_8g023900 | 32.704 | 159 | 74 | 5 | 55 | 182 | 9 | 165 | 4.24e-18 | 86.3 |
| MS.gene43468.t1 | MTR_8g023900 | 34.667 | 150 | 61 | 6 | 61 | 178 | 196 | 340 | 2.68e-16 | 80.9 |
| MS.gene43468.t1 | MTR_8g023930 | 33.758 | 157 | 65 | 6 | 56 | 179 | 22 | 172 | 2.96e-16 | 80.9 |
| MS.gene43468.t1 | MTR_4g094302 | 30.968 | 155 | 63 | 4 | 60 | 178 | 13 | 159 | 1.44e-14 | 72.4 |
| MS.gene43468.t1 | MTR_4g094302 | 33.333 | 126 | 48 | 3 | 60 | 157 | 13 | 130 | 1.63e-13 | 68.6 |
| MS.gene43468.t1 | MTR_8g093790 | 31.724 | 145 | 55 | 5 | 60 | 178 | 12 | 138 | 5.33e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43468.t1 | AT2G02450 | 74.074 | 162 | 15 | 1 | 57 | 191 | 50 | 211 | 5.06e-81 | 254 |
| MS.gene43468.t1 | AT2G02450 | 74.074 | 162 | 15 | 1 | 57 | 191 | 50 | 211 | 7.31e-81 | 255 |
| MS.gene43468.t1 | AT5G39820 | 42.574 | 202 | 61 | 6 | 43 | 189 | 2 | 203 | 1.22e-44 | 158 |
| MS.gene43468.t1 | AT2G17040 | 47.059 | 153 | 49 | 3 | 56 | 179 | 4 | 153 | 3.11e-41 | 147 |
| MS.gene43468.t1 | AT1G26870 | 40.686 | 204 | 82 | 5 | 47 | 211 | 5 | 208 | 3.11e-41 | 151 |
| MS.gene43468.t1 | AT3G04070 | 37.931 | 261 | 103 | 11 | 60 | 279 | 12 | 254 | 1.75e-39 | 144 |
| MS.gene43468.t1 | AT3G15500 | 50.000 | 148 | 44 | 4 | 60 | 178 | 16 | 162 | 9.15e-39 | 142 |
| MS.gene43468.t1 | AT1G61110 | 45.506 | 178 | 55 | 5 | 55 | 191 | 13 | 189 | 1.32e-38 | 142 |
| MS.gene43468.t1 | AT4G27410 | 48.649 | 148 | 46 | 4 | 60 | 178 | 16 | 162 | 1.95e-38 | 140 |
| MS.gene43468.t1 | AT2G43000 | 38.542 | 192 | 85 | 4 | 50 | 209 | 10 | 200 | 2.43e-38 | 139 |
| MS.gene43468.t1 | AT1G52890 | 50.000 | 148 | 44 | 4 | 60 | 178 | 16 | 162 | 2.60e-38 | 140 |
| MS.gene43468.t1 | AT5G08790 | 46.452 | 155 | 47 | 4 | 61 | 181 | 10 | 162 | 1.24e-37 | 138 |
| MS.gene43468.t1 | AT3G04070 | 35.740 | 277 | 103 | 11 | 60 | 279 | 12 | 270 | 2.84e-37 | 139 |
| MS.gene43468.t1 | AT3G03200 | 46.203 | 158 | 52 | 4 | 60 | 185 | 8 | 164 | 4.99e-37 | 140 |
| MS.gene43468.t1 | AT1G69490 | 45.513 | 156 | 47 | 5 | 60 | 180 | 11 | 163 | 5.35e-37 | 136 |
| MS.gene43468.t1 | AT1G01720 | 48.052 | 154 | 45 | 4 | 60 | 180 | 9 | 160 | 3.52e-36 | 134 |
| MS.gene43468.t1 | AT1G77450 | 46.753 | 154 | 48 | 4 | 60 | 181 | 12 | 163 | 4.12e-36 | 133 |
| MS.gene43468.t1 | AT5G17260 | 45.570 | 158 | 53 | 4 | 60 | 185 | 8 | 164 | 4.44e-36 | 138 |
| MS.gene43468.t1 | AT5G63790 | 46.104 | 154 | 47 | 4 | 61 | 180 | 53 | 204 | 5.27e-36 | 134 |
| MS.gene43468.t1 | AT5G63790 | 46.104 | 154 | 47 | 4 | 61 | 180 | 63 | 214 | 5.34e-36 | 134 |
| MS.gene43468.t1 | AT1G76420 | 44.667 | 150 | 54 | 3 | 60 | 180 | 24 | 173 | 5.98e-36 | 135 |
| MS.gene43468.t1 | AT3G17730 | 45.098 | 153 | 52 | 4 | 60 | 181 | 8 | 159 | 6.24e-36 | 132 |
| MS.gene43468.t1 | AT4G27410 | 43.636 | 165 | 46 | 4 | 60 | 178 | 16 | 179 | 8.14e-36 | 134 |
| MS.gene43468.t1 | AT5G39610 | 44.025 | 159 | 57 | 4 | 51 | 178 | 13 | 170 | 1.61e-35 | 132 |
| MS.gene43468.t1 | AT3G29035 | 40.306 | 196 | 74 | 7 | 45 | 202 | 11 | 201 | 1.61e-35 | 133 |
| MS.gene43468.t1 | AT3G10490 | 45.752 | 153 | 50 | 4 | 58 | 178 | 27 | 178 | 1.62e-35 | 131 |
| MS.gene43468.t1 | AT3G15510 | 42.683 | 164 | 53 | 4 | 62 | 184 | 21 | 184 | 2.98e-35 | 134 |
| MS.gene43468.t1 | AT3G15170 | 45.455 | 154 | 52 | 4 | 60 | 181 | 22 | 175 | 4.65e-35 | 132 |
| MS.gene43468.t1 | AT3G10490 | 44.872 | 156 | 53 | 4 | 58 | 181 | 27 | 181 | 1.23e-34 | 134 |
| MS.gene43468.t1 | AT5G07680 | 44.000 | 175 | 58 | 6 | 46 | 185 | 6 | 175 | 1.48e-34 | 131 |
| MS.gene43468.t1 | AT3G10480 | 44.231 | 156 | 54 | 4 | 58 | 181 | 27 | 181 | 1.52e-34 | 133 |
| MS.gene43468.t1 | AT3G10480 | 44.586 | 157 | 51 | 5 | 58 | 181 | 27 | 180 | 2.63e-34 | 132 |
| MS.gene43468.t1 | AT5G61430 | 43.791 | 153 | 52 | 4 | 60 | 180 | 18 | 168 | 5.41e-34 | 129 |
| MS.gene43468.t1 | AT5G07680 | 45.342 | 161 | 49 | 5 | 60 | 185 | 5 | 161 | 1.05e-33 | 128 |
| MS.gene43468.t1 | AT3G04060 | 41.212 | 165 | 66 | 2 | 45 | 178 | 7 | 171 | 1.29e-33 | 129 |
| MS.gene43468.t1 | AT1G34180 | 42.484 | 153 | 56 | 3 | 60 | 181 | 18 | 169 | 5.02e-33 | 129 |
| MS.gene43468.t1 | AT1G65910 | 44.444 | 153 | 53 | 4 | 60 | 181 | 8 | 159 | 5.80e-33 | 131 |
| MS.gene43468.t1 | AT2G24430 | 41.615 | 161 | 65 | 4 | 47 | 178 | 5 | 165 | 5.83e-33 | 126 |
| MS.gene43468.t1 | AT2G24430 | 41.615 | 161 | 65 | 4 | 47 | 178 | 5 | 165 | 5.83e-33 | 126 |
| MS.gene43468.t1 | AT1G79580 | 43.046 | 151 | 55 | 3 | 58 | 178 | 17 | 166 | 9.39e-33 | 127 |
| MS.gene43468.t1 | AT1G79580 | 43.046 | 151 | 55 | 3 | 58 | 178 | 17 | 166 | 9.39e-33 | 127 |
| MS.gene43468.t1 | AT1G79580 | 43.046 | 151 | 55 | 3 | 58 | 178 | 17 | 166 | 9.39e-33 | 127 |
| MS.gene43468.t1 | AT1G79580 | 43.046 | 151 | 55 | 3 | 58 | 178 | 17 | 166 | 9.39e-33 | 127 |
| MS.gene43468.t1 | AT1G79580 | 43.046 | 151 | 55 | 3 | 58 | 178 | 17 | 166 | 9.39e-33 | 127 |
| MS.gene43468.t1 | AT1G34180 | 42.763 | 152 | 55 | 3 | 60 | 180 | 18 | 168 | 1.59e-32 | 129 |
| MS.gene43468.t1 | AT5G46590 | 44.595 | 148 | 50 | 3 | 60 | 175 | 8 | 155 | 2.64e-32 | 124 |
| MS.gene43468.t1 | AT1G33280 | 40.260 | 154 | 60 | 3 | 58 | 181 | 8 | 159 | 3.46e-32 | 124 |
| MS.gene43468.t1 | AT3G18400 | 43.709 | 151 | 50 | 5 | 60 | 179 | 7 | 153 | 4.96e-32 | 124 |
| MS.gene43468.t1 | AT5G24590 | 38.365 | 159 | 67 | 2 | 61 | 188 | 16 | 174 | 6.87e-32 | 126 |
| MS.gene43468.t1 | AT5G53950 | 42.857 | 161 | 58 | 5 | 52 | 178 | 9 | 169 | 1.25e-31 | 124 |
| MS.gene43468.t1 | AT1G34190 | 41.447 | 152 | 57 | 3 | 60 | 180 | 18 | 168 | 1.93e-31 | 126 |
| MS.gene43468.t1 | AT4G17980 | 43.137 | 153 | 53 | 4 | 60 | 178 | 8 | 160 | 2.10e-31 | 121 |
| MS.gene43468.t1 | AT1G34180 | 39.394 | 165 | 56 | 3 | 60 | 181 | 18 | 181 | 2.27e-31 | 125 |
| MS.gene43468.t1 | AT4G17980 | 43.137 | 153 | 53 | 4 | 60 | 178 | 8 | 160 | 2.54e-31 | 120 |
| MS.gene43468.t1 | AT1G62700 | 42.384 | 151 | 56 | 3 | 58 | 178 | 7 | 156 | 2.75e-31 | 123 |
| MS.gene43468.t1 | AT1G62700 | 42.384 | 151 | 56 | 3 | 58 | 178 | 7 | 156 | 2.75e-31 | 123 |
| MS.gene43468.t1 | AT5G18270 | 42.000 | 150 | 56 | 2 | 60 | 178 | 23 | 172 | 3.05e-31 | 122 |
| MS.gene43468.t1 | AT1G12260 | 42.384 | 151 | 56 | 3 | 58 | 178 | 7 | 156 | 3.21e-31 | 123 |
| MS.gene43468.t1 | AT5G18270 | 42.000 | 150 | 56 | 2 | 60 | 178 | 23 | 172 | 3.44e-31 | 122 |
| MS.gene43468.t1 | AT1G12260 | 42.384 | 151 | 56 | 3 | 58 | 178 | 7 | 156 | 3.65e-31 | 122 |
| MS.gene43468.t1 | AT1G56010 | 42.105 | 152 | 54 | 4 | 60 | 178 | 21 | 171 | 3.66e-31 | 122 |
| MS.gene43468.t1 | AT1G34180 | 39.634 | 164 | 55 | 3 | 60 | 180 | 18 | 180 | 7.50e-31 | 124 |
| MS.gene43468.t1 | AT1G32510 | 41.618 | 173 | 59 | 5 | 60 | 194 | 8 | 176 | 1.20e-30 | 119 |
| MS.gene43468.t1 | AT1G52880 | 45.223 | 157 | 46 | 5 | 62 | 178 | 21 | 177 | 1.59e-30 | 120 |
| MS.gene43468.t1 | AT3G12977 | 43.624 | 149 | 53 | 4 | 60 | 178 | 20 | 167 | 1.74e-30 | 119 |
| MS.gene43468.t1 | AT3G10500 | 38.961 | 154 | 62 | 4 | 58 | 180 | 9 | 161 | 4.06e-30 | 122 |
| MS.gene43468.t1 | AT5G46590 | 45.455 | 132 | 43 | 2 | 60 | 162 | 8 | 139 | 4.40e-30 | 117 |
| MS.gene43468.t1 | AT4G35580 | 44.966 | 149 | 50 | 4 | 61 | 178 | 12 | 159 | 4.63e-30 | 122 |
| MS.gene43468.t1 | AT4G10350 | 38.462 | 156 | 63 | 3 | 58 | 181 | 9 | 163 | 4.78e-30 | 119 |
| MS.gene43468.t1 | AT4G35580 | 44.966 | 149 | 50 | 4 | 61 | 178 | 12 | 159 | 5.16e-30 | 122 |
| MS.gene43468.t1 | AT4G35580 | 44.966 | 149 | 50 | 4 | 61 | 178 | 12 | 159 | 5.58e-30 | 122 |
| MS.gene43468.t1 | AT2G46770 | 39.053 | 169 | 57 | 6 | 58 | 181 | 16 | 183 | 6.22e-30 | 119 |
| MS.gene43468.t1 | AT1G71930 | 40.940 | 149 | 57 | 3 | 60 | 178 | 11 | 158 | 8.93e-30 | 118 |
| MS.gene43468.t1 | AT1G71930 | 40.940 | 149 | 57 | 3 | 60 | 178 | 11 | 158 | 8.93e-30 | 118 |
| MS.gene43468.t1 | AT5G04410 | 40.000 | 155 | 59 | 5 | 58 | 180 | 9 | 161 | 9.07e-30 | 121 |
| MS.gene43468.t1 | AT4G36160 | 29.474 | 285 | 152 | 6 | 58 | 308 | 10 | 279 | 1.02e-29 | 119 |
| MS.gene43468.t1 | AT4G36160 | 29.474 | 285 | 152 | 6 | 58 | 308 | 10 | 279 | 1.02e-29 | 119 |
| MS.gene43468.t1 | AT4G36160 | 29.474 | 285 | 152 | 6 | 58 | 308 | 14 | 283 | 1.02e-29 | 119 |
| MS.gene43468.t1 | AT1G33060 | 41.611 | 149 | 55 | 3 | 61 | 178 | 27 | 174 | 1.15e-29 | 121 |
| MS.gene43468.t1 | AT1G33060 | 41.611 | 149 | 55 | 3 | 61 | 178 | 27 | 174 | 1.27e-29 | 121 |
| MS.gene43468.t1 | AT5G62380 | 37.037 | 162 | 71 | 2 | 60 | 191 | 9 | 169 | 1.49e-29 | 117 |
| MS.gene43468.t1 | AT5G62380 | 37.037 | 162 | 71 | 2 | 60 | 191 | 9 | 169 | 1.49e-29 | 117 |
| MS.gene43468.t1 | AT1G54330 | 45.270 | 148 | 50 | 4 | 60 | 178 | 8 | 153 | 2.02e-29 | 116 |
| MS.gene43468.t1 | AT3G61910 | 45.455 | 132 | 41 | 3 | 58 | 159 | 11 | 141 | 2.40e-29 | 117 |
| MS.gene43468.t1 | AT2G18060 | 41.060 | 151 | 58 | 3 | 58 | 178 | 9 | 158 | 2.57e-29 | 117 |
| MS.gene43468.t1 | AT2G18060 | 41.060 | 151 | 58 | 3 | 58 | 178 | 9 | 158 | 2.57e-29 | 117 |
| MS.gene43468.t1 | AT2G33480 | 45.390 | 141 | 52 | 3 | 60 | 176 | 17 | 156 | 3.43e-29 | 115 |
| MS.gene43468.t1 | AT5G61430 | 50.467 | 107 | 46 | 3 | 79 | 180 | 1 | 105 | 5.47e-29 | 114 |
| MS.gene43468.t1 | AT5G13180 | 46.980 | 149 | 51 | 5 | 60 | 180 | 16 | 164 | 7.90e-29 | 113 |
| MS.gene43468.t1 | AT3G12910 | 39.080 | 174 | 62 | 3 | 50 | 179 | 13 | 186 | 9.08e-29 | 114 |
| MS.gene43468.t1 | AT2G33480 | 46.154 | 143 | 50 | 4 | 60 | 176 | 17 | 158 | 1.10e-28 | 113 |
| MS.gene43468.t1 | AT1G32770 | 35.429 | 175 | 67 | 4 | 58 | 187 | 16 | 189 | 1.71e-28 | 115 |
| MS.gene43468.t1 | AT5G22380 | 40.741 | 162 | 59 | 3 | 56 | 180 | 3 | 164 | 3.68e-28 | 111 |
| MS.gene43468.t1 | AT3G49530 | 38.255 | 149 | 61 | 3 | 61 | 178 | 16 | 164 | 4.35e-28 | 115 |
| MS.gene43468.t1 | AT3G49530 | 37.888 | 161 | 65 | 4 | 61 | 186 | 16 | 176 | 5.20e-28 | 115 |
| MS.gene43468.t1 | AT1G56010 | 47.619 | 105 | 49 | 2 | 79 | 178 | 1 | 104 | 2.36e-27 | 109 |
| MS.gene43468.t1 | AT3G44350 | 36.000 | 200 | 80 | 7 | 61 | 212 | 8 | 207 | 2.43e-27 | 109 |
| MS.gene43468.t1 | AT4G28530 | 39.024 | 164 | 54 | 4 | 60 | 179 | 12 | 173 | 2.61e-27 | 111 |
| MS.gene43468.t1 | AT3G12977 | 50.000 | 102 | 47 | 2 | 80 | 178 | 14 | 114 | 2.62e-27 | 108 |
| MS.gene43468.t1 | AT3G10480 | 47.788 | 113 | 55 | 2 | 72 | 181 | 103 | 214 | 5.16e-27 | 113 |
| MS.gene43468.t1 | AT5G66300 | 39.474 | 152 | 60 | 4 | 58 | 178 | 12 | 162 | 5.88e-27 | 109 |
| MS.gene43468.t1 | AT1G32870 | 40.000 | 160 | 60 | 5 | 54 | 180 | 6 | 162 | 8.47e-27 | 112 |
| MS.gene43468.t1 | AT1G32870 | 40.000 | 160 | 60 | 5 | 54 | 180 | 6 | 162 | 8.73e-27 | 112 |
| MS.gene43468.t1 | AT1G32870 | 40.000 | 160 | 60 | 5 | 54 | 180 | 42 | 198 | 1.67e-26 | 112 |
| MS.gene43468.t1 | AT4G10350 | 43.103 | 116 | 60 | 3 | 71 | 181 | 2 | 116 | 5.41e-25 | 104 |
| MS.gene43468.t1 | AT3G44350 | 41.406 | 128 | 43 | 3 | 61 | 156 | 8 | 135 | 6.83e-24 | 97.4 |
| MS.gene43468.t1 | AT5G09330 | 35.065 | 154 | 68 | 4 | 58 | 180 | 6 | 158 | 7.87e-24 | 103 |
| MS.gene43468.t1 | AT5G09330 | 35.065 | 154 | 68 | 4 | 58 | 180 | 6 | 158 | 7.87e-24 | 103 |
| MS.gene43468.t1 | AT5G09330 | 35.065 | 154 | 68 | 4 | 58 | 180 | 6 | 158 | 7.87e-24 | 103 |
| MS.gene43468.t1 | AT5G09330 | 35.065 | 154 | 68 | 4 | 58 | 180 | 6 | 158 | 7.87e-24 | 103 |
| MS.gene43468.t1 | AT5G09330 | 35.065 | 154 | 68 | 4 | 58 | 180 | 6 | 158 | 7.87e-24 | 103 |
| MS.gene43468.t1 | AT2G43000 | 41.803 | 122 | 65 | 3 | 93 | 209 | 2 | 122 | 1.84e-23 | 97.4 |
| MS.gene43468.t1 | AT5G64060 | 29.876 | 241 | 120 | 7 | 58 | 267 | 6 | 228 | 3.31e-23 | 100 |
| MS.gene43468.t1 | AT2G27300 | 36.601 | 153 | 57 | 5 | 58 | 179 | 14 | 157 | 4.76e-23 | 99.4 |
| MS.gene43468.t1 | AT2G33480 | 50.526 | 95 | 44 | 2 | 84 | 176 | 8 | 101 | 9.56e-23 | 95.9 |
| MS.gene43468.t1 | AT5G22290 | 37.500 | 144 | 61 | 3 | 40 | 155 | 3 | 145 | 3.00e-22 | 97.4 |
| MS.gene43468.t1 | AT5G04395 | 35.417 | 144 | 51 | 3 | 60 | 161 | 30 | 173 | 5.13e-21 | 90.5 |
| MS.gene43468.t1 | AT3G44290 | 38.400 | 125 | 48 | 3 | 59 | 155 | 15 | 138 | 2.37e-20 | 89.7 |
| MS.gene43468.t1 | AT3G44290 | 38.400 | 125 | 48 | 3 | 59 | 155 | 15 | 138 | 8.40e-20 | 90.1 |
| MS.gene43468.t1 | AT3G10490 | 50.617 | 81 | 36 | 2 | 104 | 181 | 2 | 81 | 1.18e-19 | 90.1 |
| MS.gene43468.t1 | AT3G10490 | 50.617 | 81 | 36 | 2 | 104 | 181 | 2 | 81 | 1.18e-19 | 90.1 |
| MS.gene43468.t1 | AT4G01550 | 34.356 | 163 | 66 | 6 | 59 | 186 | 5 | 161 | 1.70e-19 | 90.5 |
| MS.gene43468.t1 | AT4G01540 | 35.404 | 161 | 61 | 6 | 59 | 182 | 5 | 159 | 5.87e-18 | 85.9 |
| MS.gene43468.t1 | AT4G01520 | 35.220 | 159 | 60 | 6 | 61 | 182 | 7 | 159 | 7.31e-18 | 84.0 |
| MS.gene43468.t1 | AT4G01540 | 35.849 | 159 | 59 | 6 | 61 | 182 | 7 | 159 | 7.70e-18 | 85.1 |
| MS.gene43468.t1 | AT4G01540 | 35.849 | 159 | 59 | 6 | 61 | 182 | 7 | 159 | 9.86e-18 | 85.5 |
| MS.gene43468.t1 | AT4G01540 | 35.849 | 159 | 59 | 6 | 61 | 182 | 7 | 159 | 1.30e-17 | 84.7 |
| MS.gene43468.t1 | AT3G04420 | 33.333 | 126 | 52 | 2 | 61 | 155 | 6 | 130 | 2.27e-14 | 73.6 |
| MS.gene43468.t1 | AT3G04420 | 33.333 | 126 | 52 | 2 | 61 | 155 | 6 | 130 | 2.39e-14 | 74.3 |
| MS.gene43468.t1 | AT2G18060 | 44.286 | 70 | 38 | 1 | 109 | 178 | 2 | 70 | 1.25e-13 | 71.2 |
| MS.gene43468.t1 | AT5G64530 | 35.433 | 127 | 42 | 5 | 60 | 158 | 5 | 119 | 2.25e-13 | 68.2 |
| MS.gene43468.t1 | AT4G28530 | 35.156 | 128 | 35 | 3 | 60 | 141 | 12 | 137 | 3.17e-13 | 70.5 |
| MS.gene43468.t1 | AT3G56530 | 25.850 | 147 | 78 | 2 | 60 | 176 | 54 | 199 | 1.42e-11 | 65.5 |
| MS.gene43468.t1 | AT1G02220 | 29.221 | 154 | 71 | 4 | 61 | 183 | 6 | 152 | 4.42e-11 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTAACAACTTCTGGTTAT+TGG | 0.211019 | 8.4:-352300 | MS.gene43468:CDS |
| GATGATGATGGTCGTGTAAT+TGG | 0.239615 | 8.4:+351265 | None:intergenic |
| TAAGCAGCAAAATGAAATAT+TGG | 0.264868 | 8.4:-351206 | MS.gene43468:CDS |
| ACTGAAAACTTTCGTTCAAT+TGG | 0.296485 | 8.4:-352247 | MS.gene43468:CDS |
| CCTAATCGTGTAACAACTTC+TGG | 0.308486 | 8.4:-352307 | MS.gene43468:CDS |
| CCAGAAGTTGTTACACGATT+AGG | 0.317297 | 8.4:+352307 | None:intergenic |
| ATATCGTTCGGTTTCATGTT+GGG | 0.335622 | 8.4:+352141 | None:intergenic |
| AAGGAGGTTGGAAATTGATT+TGG | 0.344511 | 8.4:+350701 | None:intergenic |
| TGAAGCTGAGACTGGGAAAA+TGG | 0.347823 | 8.4:+350898 | None:intergenic |
| GCTGCCGCTGAAGCTGAGAC+TGG | 0.355613 | 8.4:+350890 | None:intergenic |
| GTAGACAAATGATTGGGATT+TGG | 0.373594 | 8.4:+350746 | None:intergenic |
| CAACTGGTTCGGATGCCTTT+GGG | 0.374805 | 8.4:+352187 | None:intergenic |
| CCAACTGGTTCGGATGCCTT+TGG | 0.377419 | 8.4:+352186 | None:intergenic |
| AAGCAGCAAAATGAAATATT+GGG | 0.379687 | 8.4:-351205 | MS.gene43468:CDS |
| AAGCTCATGCTGCTCATGTT+AGG | 0.402422 | 8.4:+352999 | None:intergenic |
| TCTTCTGAACGGTAATTAGT+AGG | 0.410368 | 8.4:+351043 | None:intergenic |
| ATGTGATCATCAATTGTCTT+TGG | 0.414276 | 8.4:+351157 | None:intergenic |
| ATGATGATGGTCGTGTAATT+GGG | 0.415001 | 8.4:+351266 | None:intergenic |
| GATCATGTGACAACCACTCT+TGG | 0.423069 | 8.4:-351094 | MS.gene43468:CDS |
| GAGGTGTTGTTACTACTGTT+GGG | 0.428986 | 8.4:+350629 | None:intergenic |
| TGCAGCACTGGTAGCAGTAT+TGG | 0.434071 | 8.4:+350853 | None:intergenic |
| TTGGGGTGATTATGATCCTC+AGG | 0.436862 | 8.4:+350647 | None:intergenic |
| CAGCAATGTAGACAAATGAT+TGG | 0.439526 | 8.4:+350739 | None:intergenic |
| TCTGGTTATTGGAAAGCAAC+AGG | 0.440994 | 8.4:-352289 | MS.gene43468:CDS |
| GATATCGTTCGGTTTCATGT+TGG | 0.441960 | 8.4:+352140 | None:intergenic |
| TTGGGAATGGGATTTGTTGT+TGG | 0.446359 | 8.4:-351187 | MS.gene43468:CDS |
| TGATGATGGATGATCTCAAT+AGG | 0.454191 | 8.4:-350829 | MS.gene43468:CDS |
| GCAAAATGAAATATTGGGAA+TGG | 0.458597 | 8.4:-351200 | MS.gene43468:CDS |
| GGAGGTGTTGTTACTACTGT+TGG | 0.465590 | 8.4:+350628 | None:intergenic |
| CAAAATGAAATATTGGGAAT+GGG | 0.469377 | 8.4:-351199 | MS.gene43468:CDS |
| GAGCATGACGTGGTTATGCC+AGG | 0.470442 | 8.4:-352879 | MS.gene43468:CDS |
| TCTCTGACCGACTGTGGGAC+TGG | 0.472209 | 8.4:-350679 | MS.gene43468:CDS |
| TGATTATGATCCTCAGGGAT+TGG | 0.472665 | 8.4:+350653 | None:intergenic |
| ATACTCATTCATAATCCAAC+TGG | 0.474720 | 8.4:+352171 | None:intergenic |
| CATTCATAATCCAACTGGTT+CGG | 0.480582 | 8.4:+352176 | None:intergenic |
| AGGAGGAGTATTGCTGTACT+TGG | 0.484755 | 8.4:+351066 | None:intergenic |
| CAAGCTCTTCTTCAGTTGGA+TGG | 0.486659 | 8.4:+352847 | None:intergenic |
| ATCATGTGACAACCACTCTT+GGG | 0.489095 | 8.4:-351093 | MS.gene43468:CDS |
| AGTAATTAGTGATTACTTGA+AGG | 0.490931 | 8.4:+350607 | None:intergenic |
| GGCGCTGCCGCCACCACAAG+CGG | 0.493139 | 8.4:+350919 | None:intergenic |
| GATTTGGATGATTGAGATGT+GGG | 0.497103 | 8.4:+350762 | None:intergenic |
| TTCCCTCGACCTTACGGCGA+AGG | 0.497938 | 8.4:+352814 | None:intergenic |
| CTGCCGCTGAAGCTGAGACT+GGG | 0.499254 | 8.4:+350891 | None:intergenic |
| GGAAATTGATTTGGTAACAT+TGG | 0.503521 | 8.4:+350710 | None:intergenic |
| TATCGTTCGGTTTCATGTTG+GGG | 0.505358 | 8.4:+352142 | None:intergenic |
| TTAGTCTCCGCTTGTGGTGG+CGG | 0.506486 | 8.4:-350926 | MS.gene43468:CDS |
| TCTACAAGCTCTTCTTCAGT+TGG | 0.506937 | 8.4:+352843 | None:intergenic |
| TGAAACCGAACGATATCAAA+AGG | 0.509230 | 8.4:-352134 | MS.gene43468:intron |
| ATCCATCATCATTGCAGCAC+TGG | 0.512112 | 8.4:+350841 | None:intergenic |
| TTTGGCAGCAATCGGAGAGA+AGG | 0.516877 | 8.4:-352380 | MS.gene43468:CDS |
| GGAAAGCAACAGGAGCAGAT+AGG | 0.517048 | 8.4:-352279 | MS.gene43468:CDS |
| AGCAATGTAGACAAATGATT+GGG | 0.519527 | 8.4:+350740 | None:intergenic |
| TGAGCAGCTTTGGCAGCAAT+CGG | 0.520334 | 8.4:-352388 | MS.gene43468:intron |
| GGGTGAGATATCCCTATGTC+GGG | 0.523444 | 8.4:-351338 | MS.gene43468:CDS |
| TACCGTTCAGAAGATGAAGA+AGG | 0.528026 | 8.4:-351034 | MS.gene43468:CDS |
| CCTCCTTCTCTGACCGACTG+TGG | 0.530397 | 8.4:-350685 | MS.gene43468:CDS |
| CACATAGTTAACAGAATGGA+AGG | 0.538689 | 8.4:-351139 | MS.gene43468:CDS |
| TGATGATGTTGCTGCTCCTC+CGG | 0.542963 | 8.4:+353022 | None:intergenic |
| CCACAGTCGGTCAGAGAAGG+AGG | 0.546229 | 8.4:+350685 | None:intergenic |
| TGGGAGACAACGAGGGAGGG+AGG | 0.546963 | 8.4:+351285 | None:intergenic |
| GCATATTGTACTAGTTGCCT+AGG | 0.547334 | 8.4:+350968 | None:intergenic |
| GTCCCACAGTCGGTCAGAGA+AGG | 0.552251 | 8.4:+350682 | None:intergenic |
| GGGAGACAACGAGGGAGGGA+GGG | 0.560158 | 8.4:+351286 | None:intergenic |
| AGTCGGTCAGAGAAGGAGGT+TGG | 0.561135 | 8.4:+350689 | None:intergenic |
| TACCAGTGCTGCAATGATGA+TGG | 0.562350 | 8.4:-350843 | MS.gene43468:CDS |
| CTCCTTCTCTGACCGACTGT+GGG | 0.564074 | 8.4:-350684 | MS.gene43468:CDS |
| CTAGTACAATATGCAGCTGC+GGG | 0.565924 | 8.4:-350959 | MS.gene43468:CDS |
| ATCCTTCTTCATCTTCTGAA+CGG | 0.566170 | 8.4:+351032 | None:intergenic |
| TGGGGTGATTATGATCCTCA+GGG | 0.566445 | 8.4:+350648 | None:intergenic |
| GAACGGTAATTAGTAGGAGG+AGG | 0.572179 | 8.4:+351049 | None:intergenic |
| AGGGTGAGATATCCCTATGT+CGG | 0.573960 | 8.4:-351339 | MS.gene43468:CDS |
| TGGATGGCAATAGCAGCAGC+CGG | 0.578372 | 8.4:-353041 | MS.gene43468:CDS |
| GGATTTGGATGATTGAGATG+TGG | 0.580035 | 8.4:+350761 | None:intergenic |
| AATTAGTGATTACTTGAAGG+AGG | 0.582479 | 8.4:+350610 | None:intergenic |
| ATGAGCTTGAGTCACGAAGA+TGG | 0.587554 | 8.4:-352984 | MS.gene43468:CDS |
| CTGTTAGTCTCCGCTTGTGG+TGG | 0.588546 | 8.4:-350929 | MS.gene43468:CDS |
| TCTCTTGTATACCCGACATA+GGG | 0.588580 | 8.4:+351327 | None:intergenic |
| CTCTCTTGTATACCCGACAT+AGG | 0.590093 | 8.4:+351326 | None:intergenic |
| CCAAAGGCATCCGAACCAGT+TGG | 0.592737 | 8.4:-352186 | MS.gene43468:CDS |
| CGAGATAGAAAGTATCGAAA+CGG | 0.593685 | 8.4:-352337 | MS.gene43468:CDS |
| TGATCACATAGTTAACAGAA+TGG | 0.595016 | 8.4:-351143 | MS.gene43468:CDS |
| AGCATGACGTGGTTATGCCA+GGG | 0.596795 | 8.4:-352878 | MS.gene43468:CDS |
| TGTCGGGTATACAAGAGAGC+AGG | 0.602519 | 8.4:-351322 | MS.gene43468:CDS |
| AATTGGGAGACAACGAGGGA+GGG | 0.605068 | 8.4:+351282 | None:intergenic |
| TTTCGATACTTTCTATCTCG+AGG | 0.612931 | 8.4:+352340 | None:intergenic |
| CGACCATCATCATCATCAAG+AGG | 0.614625 | 8.4:-351256 | MS.gene43468:CDS |
| TCTAACGATAATAGTAACAA+AGG | 0.615780 | 8.4:-352948 | MS.gene43468:CDS |
| TCTCTGTTAGTCTCCGCTTG+TGG | 0.618457 | 8.4:-350932 | MS.gene43468:CDS |
| TTTCCCAGTCTCAGCTTCAG+CGG | 0.622682 | 8.4:-350894 | MS.gene43468:CDS |
| TCTGAACGGTAATTAGTAGG+AGG | 0.623921 | 8.4:+351046 | None:intergenic |
| ACTAGTACAATATGCAGCTG+CGG | 0.627166 | 8.4:-350960 | MS.gene43468:CDS |
| GTACCTCTTGATGATGATGA+TGG | 0.633918 | 8.4:+351253 | None:intergenic |
| AGGTGTTGTTACTACTGTTG+GGG | 0.635388 | 8.4:+350630 | None:intergenic |
| AGAATGGAAGGAAGCAGTAG+CGG | 0.638297 | 8.4:-351127 | MS.gene43468:CDS |
| ATGGCAATAGCAGCAGCCGG+AGG | 0.639528 | 8.4:-353038 | MS.gene43468:CDS |
| CAGCAATCGGAGAGAAGGAG+TGG | 0.646393 | 8.4:-352375 | MS.gene43468:CDS |
| AGCAGCAGCAACATCAACCT+AGG | 0.647554 | 8.4:-350985 | MS.gene43468:CDS |
| TATTCTGGAAAAGCTCCCAA+AGG | 0.650827 | 8.4:-352202 | MS.gene43468:CDS |
| GTTGGATGGAAACGAAACCC+TGG | 0.652572 | 8.4:+352861 | None:intergenic |
| TAATTGGGAGACAACGAGGG+AGG | 0.654012 | 8.4:+351281 | None:intergenic |
| CGTGTAATTGGGAGACAACG+AGG | 0.654137 | 8.4:+351277 | None:intergenic |
| TTGGATTCCAGTCCCACAGT+CGG | 0.664258 | 8.4:+350672 | None:intergenic |
| ATGGAAGGAAGCAGTAGCGG+CGG | 0.680492 | 8.4:-351124 | MS.gene43468:CDS |
| GTACTTGGAAAGCCCAAGAG+TGG | 0.699274 | 8.4:+351081 | None:intergenic |
| GTGTAATTGGGAGACAACGA+GGG | 0.701719 | 8.4:+351278 | None:intergenic |
| TGATGATCACGAGCATGACG+TGG | 0.732266 | 8.4:-352889 | MS.gene43468:CDS |
| GGACTGGAATCCAATCCCTG+AGG | 0.753349 | 8.4:-350663 | MS.gene43468:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAATAAATATATACC+AGG | + | chr8.4:350931-350950 | None:intergenic | 10.0% |
| !! | ATATATATATATATGCTATA+TGG | + | chr8.4:351893-351912 | None:intergenic | 10.0% |
| !! | ATTATATTATTAAATCAAAG+AGG | + | chr8.4:351064-351083 | None:intergenic | 10.0% |
| !! | TTATATTATTAAATCAAAGA+GGG | + | chr8.4:351063-351082 | None:intergenic | 10.0% |
| !!! | TTTTTGATAAATAAATATCT+TGG | - | chr8.4:351093-351112 | MS.gene43468:CDS | 10.0% |
| !! | TCAAATTCAAAATTATTGTA+AGG | + | chr8.4:352289-352308 | None:intergenic | 15.0% |
| !! | TTGAATTTGAATTTGAATTA+GGG | - | chr8.4:352299-352318 | MS.gene43468:CDS | 15.0% |
| !! | TTTGAATTTGAATTTGAATT+AGG | - | chr8.4:352298-352317 | MS.gene43468:CDS | 15.0% |
| !!! | GTTGTATATGAATATATTTT+AGG | + | chr8.4:352014-352033 | None:intergenic | 15.0% |
| !! | AAATATGAAGCAAATAAGTA+AGG | + | chr8.4:351127-351146 | None:intergenic | 20.0% |
| !! | AATATGAAGCAAATAAGTAA+GGG | + | chr8.4:351126-351145 | None:intergenic | 20.0% |
| !! | GTGTGTATACTATATATTTA+TGG | + | chr8.4:351782-351801 | None:intergenic | 20.0% |
| !!! | AATATAGCTCTTTAAAACTA+GGG | + | chr8.4:351718-351737 | None:intergenic | 20.0% |
| !!! | AATTATGTGATTGAATTTTG+AGG | - | chr8.4:351215-351234 | MS.gene43468:CDS | 20.0% |
| !!! | ATATTATGCATCTTGATTTT+GGG | - | chr8.4:351740-351759 | MS.gene43468:intron | 20.0% |
| !!! | GAAAGGAATTAATTAATTTG+TGG | + | chr8.4:352139-352158 | None:intergenic | 20.0% |
| !!! | TAATATAGCTCTTTAAAACT+AGG | + | chr8.4:351719-351738 | None:intergenic | 20.0% |
| !!! | TATATTATGCATCTTGATTT+TGG | - | chr8.4:351739-351758 | MS.gene43468:intron | 20.0% |
| ! | AAGCAGCAAAATGAAATATT+GGG | - | chr8.4:352452-352471 | MS.gene43468:intron | 25.0% |
| ! | ATATATATATGCTATATGGC+TGG | + | chr8.4:351889-351908 | None:intergenic | 25.0% |
| ! | ATTATTAAATCAAAGAGGGA+TGG | + | chr8.4:351059-351078 | None:intergenic | 25.0% |
| ! | CAAAATGAAATATTGGGAAT+GGG | - | chr8.4:352458-352477 | MS.gene43468:intron | 25.0% |
| ! | GATAAATAAATATCTTGGCT+TGG | - | chr8.4:351098-351117 | MS.gene43468:CDS | 25.0% |
| ! | TAAGCAGCAAAATGAAATAT+TGG | - | chr8.4:352451-352470 | MS.gene43468:intron | 25.0% |
| ! | TATTGTAAGGATCCAAAATT+TGG | + | chr8.4:352276-352295 | None:intergenic | 25.0% |
| ! | TCTAACGATAATAGTAACAA+AGG | - | chr8.4:350709-350728 | MS.gene43468:CDS | 25.0% |
| ! | TTATTAAATCAAAGAGGGAT+GGG | + | chr8.4:351058-351077 | None:intergenic | 25.0% |
| !! | ATATACCTTTTGATATCGTT+CGG | + | chr8.4:351531-351550 | None:intergenic | 25.0% |
| !! | ATGAAATGTATGCCAAATTT+TGG | - | chr8.4:352261-352280 | MS.gene43468:CDS | 25.0% |
| !! | GCAGTTATATTTGGTAATTA+AGG | + | chr8.4:351601-351620 | None:intergenic | 25.0% |
| !! | TTTTCCAGAATAGAAAACTA+GGG | + | chr8.4:351447-351466 | None:intergenic | 25.0% |
| !!! | CATTACTGATTTTTCTTTCA+TGG | - | chr8.4:351638-351657 | MS.gene43468:intron | 25.0% |
| !!! | TTTTAAAACCAACAAAGACA+CGG | + | chr8.4:351688-351707 | None:intergenic | 25.0% |
| ACTGAAAACTTTCGTTCAAT+TGG | - | chr8.4:351410-351429 | MS.gene43468:intron | 30.0% | |
| AGCAATGTAGACAAATGATT+GGG | + | chr8.4:352920-352939 | None:intergenic | 30.0% | |
| ATACTCATTCATAATCCAAC+TGG | + | chr8.4:351489-351508 | None:intergenic | 30.0% | |
| ATGTGATCATCAATTGTCTT+TGG | + | chr8.4:352503-352522 | None:intergenic | 30.0% | |
| GAGAGGTAATTAATCACAAA+CGG | + | chr8.4:352045-352064 | None:intergenic | 30.0% | |
| GCAAAATGAAATATTGGGAA+TGG | - | chr8.4:352457-352476 | MS.gene43468:intron | 30.0% | |
| TGATCACATAGTTAACAGAA+TGG | - | chr8.4:352514-352533 | MS.gene43468:intron | 30.0% | |
| ! | CTTTTCCAGAATAGAAAACT+AGG | + | chr8.4:351448-351467 | None:intergenic | 30.0% |
| !! | AAAACCCTAGTTTTCTATTC+TGG | - | chr8.4:351440-351459 | MS.gene43468:intron | 30.0% |
| !! | GGAAATTGATTTGGTAACAT+TGG | + | chr8.4:352950-352969 | None:intergenic | 30.0% |
| !! | TATGTGATTGAATTTTGAGG+TGG | - | chr8.4:351218-351237 | MS.gene43468:CDS | 30.0% |
| AAATGATCACGAGAGATGAA+AGG | + | chr8.4:352156-352175 | None:intergenic | 35.0% | |
| AAGGAGGTTGGAAATTGATT+TGG | + | chr8.4:352959-352978 | None:intergenic | 35.0% | |
| AGGGATGGGAACAAAAAAAA+AGG | + | chr8.4:351044-351063 | None:intergenic | 35.0% | |
| ATATCGTTCGGTTTCATGTT+GGG | + | chr8.4:351519-351538 | None:intergenic | 35.0% | |
| ATCCTTCTTCATCTTCTGAA+CGG | + | chr8.4:352628-352647 | None:intergenic | 35.0% | |
| CACATAGTTAACAGAATGGA+AGG | - | chr8.4:352518-352537 | MS.gene43468:intron | 35.0% | |
| CAGCAATGTAGACAAATGAT+TGG | + | chr8.4:352921-352940 | None:intergenic | 35.0% | |
| CATTCATAATCCAACTGGTT+CGG | + | chr8.4:351484-351503 | None:intergenic | 35.0% | |
| CCAAATATAACTGCTCTTGA+TGG | - | chr8.4:351607-351626 | MS.gene43468:intron | 35.0% | |
| CCATCAAGAGCAGTTATATT+TGG | + | chr8.4:351610-351629 | None:intergenic | 35.0% | |
| GATTTGGATGATTGAGATGT+GGG | + | chr8.4:352898-352917 | None:intergenic | 35.0% | |
| GGGATGGGAACAAAAAAAAA+GGG | + | chr8.4:351043-351062 | None:intergenic | 35.0% | |
| GTAGACAAATGATTGGGATT+TGG | + | chr8.4:352914-352933 | None:intergenic | 35.0% | |
| TATATATGCTATATGGCTGG+TGG | + | chr8.4:351886-351905 | None:intergenic | 35.0% | |
| TATTGAAACCGTGTCTTTGT+TGG | - | chr8.4:351677-351696 | MS.gene43468:intron | 35.0% | |
| TCTTCTGAACGGTAATTAGT+AGG | + | chr8.4:352617-352636 | None:intergenic | 35.0% | |
| TGAAACCGAACGATATCAAA+AGG | - | chr8.4:351523-351542 | MS.gene43468:intron | 35.0% | |
| TTTCGATACTTTCTATCTCG+AGG | + | chr8.4:351320-351339 | None:intergenic | 35.0% | |
| ! | CTAGCTAGCTACTATTGTTT+TGG | + | chr8.4:351846-351865 | None:intergenic | 35.0% |
| ! | GTGTAACAACTTCTGGTTAT+TGG | - | chr8.4:351357-351376 | MS.gene43468:intron | 35.0% |
| ! | TATATGATGATGAGCAGCTT+TGG | - | chr8.4:351259-351278 | MS.gene43468:CDS | 35.0% |
| !! | ATGATGATGGTCGTGTAATT+GGG | + | chr8.4:352394-352413 | None:intergenic | 35.0% |
| !! | CGAGATAGAAAGTATCGAAA+CGG | - | chr8.4:351320-351339 | MS.gene43468:CDS | 35.0% |
| !! | TCCAGAATTGCTTTAGGAAA+GGG | + | chr8.4:351018-351037 | None:intergenic | 35.0% |
| !! | TGATGATGGATGATCTCAAT+AGG | - | chr8.4:352828-352847 | MS.gene43468:intron | 35.0% |
| !! | TTCCAGAATTGCTTTAGGAA+AGG | + | chr8.4:351019-351038 | None:intergenic | 35.0% |
| ACTAGTACAATATGCAGCTG+CGG | - | chr8.4:352697-352716 | MS.gene43468:intron | 40.0% | |
| AGGGTTTCCAGAATTGCTTT+AGG | + | chr8.4:351024-351043 | None:intergenic | 40.0% | |
| ATATACCAGGAAGTTCCCAA+GGG | + | chr8.4:350918-350937 | None:intergenic | 40.0% | |
| ATCATGTGACAACCACTCTT+GGG | - | chr8.4:352564-352583 | MS.gene43468:intron | 40.0% | |
| ATCTTTATCGCTATGACCCT+TGG | - | chr8.4:350899-350918 | MS.gene43468:CDS | 40.0% | |
| CCAGAAGTTGTTACACGATT+AGG | + | chr8.4:351353-351372 | None:intergenic | 40.0% | |
| CCTAATCGTGTAACAACTTC+TGG | - | chr8.4:351350-351369 | MS.gene43468:intron | 40.0% | |
| GATATCGTTCGGTTTCATGT+TGG | + | chr8.4:351520-351539 | None:intergenic | 40.0% | |
| GCATATTGTACTAGTTGCCT+AGG | + | chr8.4:352692-352711 | None:intergenic | 40.0% | |
| GGATTTGGATGATTGAGATG+TGG | + | chr8.4:352899-352918 | None:intergenic | 40.0% | |
| TACCGTTCAGAAGATGAAGA+AGG | - | chr8.4:352623-352642 | MS.gene43468:intron | 40.0% | |
| TAGAAGCCAAGAATGCAAGA+GGG | - | chr8.4:351925-351944 | MS.gene43468:intron | 40.0% | |
| TATATACCAGGAAGTTCCCA+AGG | + | chr8.4:350919-350938 | None:intergenic | 40.0% | |
| TATCGTTCGGTTTCATGTTG+GGG | + | chr8.4:351518-351537 | None:intergenic | 40.0% | |
| TCTACAAGCTCTTCTTCAGT+TGG | + | chr8.4:350817-350836 | None:intergenic | 40.0% | |
| TCTCTTGTATACCCGACATA+GGG | + | chr8.4:352333-352352 | None:intergenic | 40.0% | |
| TCTGAACGGTAATTAGTAGG+AGG | + | chr8.4:352614-352633 | None:intergenic | 40.0% | |
| TCTGGTTATTGGAAAGCAAC+AGG | - | chr8.4:351368-351387 | MS.gene43468:intron | 40.0% | |
| TCTTTATCGCTATGACCCTT+GGG | - | chr8.4:350900-350919 | MS.gene43468:CDS | 40.0% | |
| TGATTATGATCCTCAGGGAT+TGG | + | chr8.4:353007-353026 | None:intergenic | 40.0% | |
| TTAGAAGCCAAGAATGCAAG+AGG | - | chr8.4:351924-351943 | MS.gene43468:intron | 40.0% | |
| ! | TATTCTGGAAAAGCTCCCAA+AGG | - | chr8.4:351455-351474 | MS.gene43468:intron | 40.0% |
| !! | AGGTGTTGTTACTACTGTTG+GGG | + | chr8.4:353030-353049 | None:intergenic | 40.0% |
| !! | CCAGAATTGCTTTAGGAAAG+GGG | + | chr8.4:351017-351036 | None:intergenic | 40.0% |
| !! | GAGGTGTTGTTACTACTGTT+GGG | + | chr8.4:353031-353050 | None:intergenic | 40.0% |
| !! | GATGATGATGGTCGTGTAAT+TGG | + | chr8.4:352395-352414 | None:intergenic | 40.0% |
| !! | GTACCTCTTGATGATGATGA+TGG | + | chr8.4:352407-352426 | None:intergenic | 40.0% |
| !! | GTTTTGGTGTGCTATAGCTT+TGG | + | chr8.4:351830-351849 | None:intergenic | 40.0% |
| !! | TCATTTTGATAGTCCAGTGC+AGG | - | chr8.4:352170-352189 | MS.gene43468:CDS | 40.0% |
| !! | TTGGGAATGGGATTTGTTGT+TGG | - | chr8.4:352470-352489 | MS.gene43468:intron | 40.0% |
| AAGCTCATGCTGCTCATGTT+AGG | + | chr8.4:350661-350680 | None:intergenic | 45.0% | |
| AGAATGGAAGGAAGCAGTAG+CGG | - | chr8.4:352530-352549 | MS.gene43468:intron | 45.0% | |
| AGGGTGAGATATCCCTATGT+CGG | - | chr8.4:352318-352337 | MS.gene43468:CDS | 45.0% | |
| ATCCATCATCATTGCAGCAC+TGG | + | chr8.4:352819-352838 | None:intergenic | 45.0% | |
| ATGAGCTTGAGTCACGAAGA+TGG | - | chr8.4:350673-350692 | MS.gene43468:CDS | 45.0% | |
| CAAGCTCTTCTTCAGTTGGA+TGG | + | chr8.4:350813-350832 | None:intergenic | 45.0% | |
| CCCCTTTCCTAAAGCAATTC+TGG | - | chr8.4:351014-351033 | MS.gene43468:CDS | 45.0% | |
| CGACCATCATCATCATCAAG+AGG | - | chr8.4:352401-352420 | MS.gene43468:intron | 45.0% | |
| CTAGTACAATATGCAGCTGC+GGG | - | chr8.4:352698-352717 | MS.gene43468:intron | 45.0% | |
| CTCTCTTGTATACCCGACAT+AGG | + | chr8.4:352334-352353 | None:intergenic | 45.0% | |
| GAACGGTAATTAGTAGGAGG+AGG | + | chr8.4:352611-352630 | None:intergenic | 45.0% | |
| GATCATGTGACAACCACTCT+TGG | - | chr8.4:352563-352582 | MS.gene43468:intron | 45.0% | |
| GTGTAATTGGGAGACAACGA+GGG | + | chr8.4:352382-352401 | None:intergenic | 45.0% | |
| TACCAGTGCTGCAATGATGA+TGG | - | chr8.4:352814-352833 | MS.gene43468:intron | 45.0% | |
| TGAAGCTGAGACTGGGAAAA+TGG | + | chr8.4:352762-352781 | None:intergenic | 45.0% | |
| TGGGGTGATTATGATCCTCA+GGG | + | chr8.4:353012-353031 | None:intergenic | 45.0% | |
| TTGGGGTGATTATGATCCTC+AGG | + | chr8.4:353013-353032 | None:intergenic | 45.0% | |
| ! | AACGTTTTCCCTCGACCTTA+CGG | + | chr8.4:350852-350871 | None:intergenic | 45.0% |
| !! | AGGAGGAGTATTGCTGTACT+TGG | + | chr8.4:352594-352613 | None:intergenic | 45.0% |
| !! | GGAGGTGTTGTTACTACTGT+TGG | + | chr8.4:353032-353051 | None:intergenic | 45.0% |
| AATTGGGAGACAACGAGGGA+GGG | + | chr8.4:352378-352397 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr8.4:352060-352079 | None:intergenic | 50.0% | |
| AGAGTTCTACCTTCGCCGTA+AGG | - | chr8.4:350834-350853 | MS.gene43468:CDS | 50.0% | |
| AGCAGCAGCAACATCAACCT+AGG | - | chr8.4:352672-352691 | MS.gene43468:intron | 50.0% | |
| AGCATGACGTGGTTATGCCA+GGG | - | chr8.4:350779-350798 | MS.gene43468:CDS | 50.0% | |
| AGCTAGCTGCGTGAAACTTG+CGG | - | chr8.4:351860-351879 | MS.gene43468:intron | 50.0% | |
| CGTGTAATTGGGAGACAACG+AGG | + | chr8.4:352383-352402 | None:intergenic | 50.0% | |
| CTCTCTCCCTCTTGCATTCT+TGG | + | chr8.4:351934-351953 | None:intergenic | 50.0% | |
| GGAAAGCAACAGGAGCAGAT+AGG | - | chr8.4:351378-351397 | MS.gene43468:intron | 50.0% | |
| GGGTGAGATATCCCTATGTC+GGG | - | chr8.4:352319-352338 | MS.gene43468:CDS | 50.0% | |
| GTACAGTAGTCTACCTGCAC+TGG | + | chr8.4:352186-352205 | None:intergenic | 50.0% | |
| GTACTTGGAAAGCCCAAGAG+TGG | + | chr8.4:352579-352598 | None:intergenic | 50.0% | |
| GTTGGATGGAAACGAAACCC+TGG | + | chr8.4:350799-350818 | None:intergenic | 50.0% | |
| TAATTGGGAGACAACGAGGG+AGG | + | chr8.4:352379-352398 | None:intergenic | 50.0% | |
| TATGACCCTTGGGAACTTCC+TGG | - | chr8.4:350910-350929 | MS.gene43468:CDS | 50.0% | |
| TGATGATCACGAGCATGACG+TGG | - | chr8.4:350768-350787 | MS.gene43468:CDS | 50.0% | |
| TGTCGGGTATACAAGAGAGC+AGG | - | chr8.4:352335-352354 | MS.gene43468:CDS | 50.0% | |
| TTGGATTCCAGTCCCACAGT+CGG | + | chr8.4:352988-353007 | None:intergenic | 50.0% | |
| TTTCCCAGTCTCAGCTTCAG+CGG | - | chr8.4:352763-352782 | MS.gene43468:intron | 50.0% | |
| TTTGGCAGCAATCGGAGAGA+AGG | - | chr8.4:351277-351296 | MS.gene43468:CDS | 50.0% | |
| ! | TCTCTGTTAGTCTCCGCTTG+TGG | - | chr8.4:352725-352744 | MS.gene43468:intron | 50.0% |
| ! | TGAGCAGCTTTGGCAGCAAT+CGG | - | chr8.4:351269-351288 | MS.gene43468:CDS | 50.0% |
| ! | TGATGATGTTGCTGCTCCTC+CGG | + | chr8.4:350638-350657 | None:intergenic | 50.0% |
| !! | CAACTGGTTCGGATGCCTTT+GGG | + | chr8.4:351473-351492 | None:intergenic | 50.0% |
| !! | TGCAGCACTGGTAGCAGTAT+TGG | + | chr8.4:352807-352826 | None:intergenic | 50.0% |
| AGTCGGTCAGAGAAGGAGGT+TGG | + | chr8.4:352971-352990 | None:intergenic | 55.0% | |
| ATGGAAGGAAGCAGTAGCGG+CGG | - | chr8.4:352533-352552 | MS.gene43468:intron | 55.0% | |
| CAGCAATCGGAGAGAAGGAG+TGG | - | chr8.4:351282-351301 | MS.gene43468:CDS | 55.0% | |
| CTCCTTCTCTGACCGACTGT+GGG | - | chr8.4:352973-352992 | MS.gene43468:CDS | 55.0% | |
| GAGCATGACGTGGTTATGCC+AGG | - | chr8.4:350778-350797 | MS.gene43468:CDS | 55.0% | |
| GGACTGGAATCCAATCCCTG+AGG | - | chr8.4:352994-353013 | MS.gene43468:CDS | 55.0% | |
| TACCTTCGCCGTAAGGTCGA+GGG | - | chr8.4:350841-350860 | MS.gene43468:CDS | 55.0% | |
| TTAGTCTCCGCTTGTGGTGG+CGG | - | chr8.4:352731-352750 | MS.gene43468:intron | 55.0% | |
| ! | CTGTTAGTCTCCGCTTGTGG+TGG | - | chr8.4:352728-352747 | MS.gene43468:intron | 55.0% |
| !! | CCAAAGGCATCCGAACCAGT+TGG | - | chr8.4:351471-351490 | MS.gene43468:intron | 55.0% |
| !! | CCAACTGGTTCGGATGCCTT+TGG | + | chr8.4:351474-351493 | None:intergenic | 55.0% |
| ATGGCAATAGCAGCAGCCGG+AGG | - | chr8.4:350619-350638 | MS.gene43468:CDS | 60.0% | |
| CCACAGTCGGTCAGAGAAGG+AGG | + | chr8.4:352975-352994 | None:intergenic | 60.0% | |
| CCTCCTTCTCTGACCGACTG+TGG | - | chr8.4:352972-352991 | MS.gene43468:CDS | 60.0% | |
| CTACCTTCGCCGTAAGGTCG+AGG | - | chr8.4:350840-350859 | MS.gene43468:CDS | 60.0% | |
| CTGCCGCTGAAGCTGAGACT+GGG | + | chr8.4:352769-352788 | None:intergenic | 60.0% | |
| GTCCCACAGTCGGTCAGAGA+AGG | + | chr8.4:352978-352997 | None:intergenic | 60.0% | |
| TCTCTGACCGACTGTGGGAC+TGG | - | chr8.4:352978-352997 | MS.gene43468:CDS | 60.0% | |
| TTCCCTCGACCTTACGGCGA+AGG | + | chr8.4:350846-350865 | None:intergenic | 60.0% | |
| GCTGCCGCTGAAGCTGAGAC+TGG | + | chr8.4:352770-352789 | None:intergenic | 65.0% | |
| GGGAGACAACGAGGGAGGGA+GGG | + | chr8.4:352374-352393 | None:intergenic | 65.0% | |
| TGGGAGACAACGAGGGAGGG+AGG | + | chr8.4:352375-352394 | None:intergenic | 65.0% | |
| GGCGCTGCCGCCACCACAAG+CGG | + | chr8.4:352741-352760 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 350619 | 353060 | 350619 | ID=MS.gene43468 |
| chr8.4 | mRNA | 350619 | 353060 | 350619 | ID=MS.gene43468.t1;Parent=MS.gene43468 |
| chr8.4 | exon | 352829 | 353060 | 352829 | ID=MS.gene43468.t1.exon1;Parent=MS.gene43468.t1 |
| chr8.4 | CDS | 352829 | 353060 | 352829 | ID=cds.MS.gene43468.t1;Parent=MS.gene43468.t1 |
| chr8.4 | exon | 352135 | 352403 | 352135 | ID=MS.gene43468.t1.exon2;Parent=MS.gene43468.t1 |
| chr8.4 | CDS | 352135 | 352403 | 352135 | ID=cds.MS.gene43468.t1;Parent=MS.gene43468.t1 |
| chr8.4 | exon | 350619 | 351359 | 350619 | ID=MS.gene43468.t1.exon3;Parent=MS.gene43468.t1 |
| chr8.4 | CDS | 350619 | 351359 | 350619 | ID=cds.MS.gene43468.t1;Parent=MS.gene43468.t1 |
| Gene Sequence |
| Protein sequence |
