Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49570.t1 | XP_003613600.1 | 98.4 | 306 | 5 | 0 | 1 | 306 | 1 | 306 | 1.80E-116 | 429.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49570.t1 | G7K9T7 | 98.4 | 306 | 5 | 0 | 1 | 306 | 1 | 306 | 1.3e-116 | 429.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene49570 | 0.811646 | 6.31E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene49570 | -0.830918 | 2.24E-55 | -1.69E-46 |
| MS.gene049452 | MS.gene49570 | 0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene49570 | 0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene49570 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene050941 | MS.gene49570 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene49570 | 0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene49570 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene052518 | MS.gene49570 | 0.816296 | 5.95E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene49570 | 0.801962 | 7.03E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene49570 | 0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene49570 | 0.807026 | 6.18E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene49570 | 0.803578 | 3.26E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene49570 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene49570 | 0.838335 | 3.06E-57 | -1.69E-46 |
| MS.gene05350 | MS.gene49570 | 0.816007 | 6.90E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene49570 | 0.822922 | 1.83E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene49570 | 0.807146 | 5.83E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene49570 | 0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene49570 | 0.810965 | 8.87E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene49570 | 0.804322 | 2.28E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene49570 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene49570 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene49570 | 0.804914 | 1.72E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene49570 | 0.838981 | 2.08E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene49570 | 0.809571 | 1.77E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene49570 | 0.802924 | 4.45E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene49570 | 0.839258 | 1.76E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene49570 | 0.875176 | 3.79E-68 | -1.69E-46 |
| MS.gene057392 | MS.gene49570 | 0.836242 | 1.05E-56 | -1.69E-46 |
| MS.gene057598 | MS.gene49570 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene49570 | 0.806362 | 8.53E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene49570 | 0.822148 | 2.77E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene49570 | 0.84208 | 3.22E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene49570 | 0.817489 | 3.21E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene49570 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene49570 | 0.840375 | 9.03E-58 | -1.69E-46 |
| MS.gene058783 | MS.gene49570 | 0.852769 | 3.71E-61 | -1.69E-46 |
| MS.gene058979 | MS.gene49570 | 0.825191 | 5.36E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene49570 | 0.801298 | 9.62E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene49570 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene060244 | MS.gene49570 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene49570 | 0.806777 | 6.98E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene49570 | 0.804059 | 2.59E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene49570 | 0.848288 | 6.74E-60 | -1.69E-46 |
| MS.gene060937 | MS.gene49570 | 0.836025 | 1.19E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49570.t1 | MTR_5g038550 | 98.039 | 306 | 6 | 0 | 1 | 306 | 1 | 306 | 0.0 | 613 |
| MS.gene49570.t1 | MTR_5g038550 | 97.712 | 306 | 6 | 1 | 1 | 306 | 1 | 305 | 0.0 | 607 |
| MS.gene49570.t1 | MTR_3g082850 | 32.759 | 232 | 151 | 3 | 3 | 233 | 1 | 228 | 6.82e-37 | 134 |
| MS.gene49570.t1 | MTR_3g082850 | 32.759 | 232 | 151 | 3 | 3 | 233 | 1 | 228 | 9.25e-37 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49570.t1 | AT1G27000 | 44.079 | 304 | 161 | 4 | 3 | 305 | 1 | 296 | 3.03e-83 | 254 |
| MS.gene49570.t1 | AT2G02730 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 3.34e-77 | 237 |
| MS.gene49570.t1 | AT2G02730 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 3.34e-77 | 237 |
| MS.gene49570.t1 | AT2G02730 | 45.977 | 261 | 131 | 3 | 3 | 263 | 1 | 251 | 3.34e-77 | 237 |
| MS.gene49570.t1 | AT1G04960 | 38.528 | 231 | 132 | 3 | 3 | 230 | 1 | 224 | 2.07e-48 | 164 |
| MS.gene49570.t1 | AT1G04960 | 38.356 | 219 | 125 | 3 | 15 | 230 | 30 | 241 | 1.01e-44 | 155 |
| MS.gene49570.t1 | AT1G24265 | 24.464 | 233 | 165 | 5 | 11 | 238 | 5 | 231 | 3.39e-17 | 81.6 |
| MS.gene49570.t1 | AT1G24265 | 24.464 | 233 | 165 | 5 | 11 | 238 | 5 | 231 | 3.39e-17 | 81.6 |
| MS.gene49570.t1 | AT1G24265 | 25.221 | 226 | 158 | 5 | 18 | 238 | 47 | 266 | 5.65e-17 | 81.3 |
| MS.gene49570.t1 | AT1G24267 | 26.383 | 235 | 162 | 4 | 9 | 238 | 3 | 231 | 6.95e-12 | 65.9 |
| MS.gene49570.t1 | AT1G24267 | 27.119 | 236 | 160 | 5 | 9 | 238 | 3 | 232 | 6.36e-11 | 63.2 |
Find 87 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGATTGGACTATATTAT+TGG | 0.190078 | 5.1:-29237244 | MS.gene49570:CDS |
| GACCCAGAGAATTCAAATTT+TGG | 0.210369 | 5.1:-29238725 | MS.gene49570:CDS |
| CATCCAAAATTTGAATTCTC+TGG | 0.218747 | 5.1:+29238722 | None:intergenic |
| GAATTCAGTGCTTGAGAATC+AGG | 0.292398 | 5.1:-29237444 | MS.gene49570:intron |
| TGATTTGATCGGTGATCTTC+AGG | 0.298477 | 5.1:-29242515 | MS.gene49570:intron |
| ATGGCTTATCATAGTGGAAT+TGG | 0.299545 | 5.1:-29242699 | MS.gene49570:CDS |
| GTAGACCTCCCTGGAAGTTT+TGG | 0.311620 | 5.1:+29236598 | None:intergenic |
| ACCTTGGGTGCTGTGGGTTA+TGG | 0.321412 | 5.1:-29241024 | MS.gene49570:CDS |
| GCTCACATATCCAGGATTTC+AGG | 0.324581 | 5.1:-29236569 | MS.gene49570:intron |
| TACTATTGTGCCGGGTGGTT+TGG | 0.326973 | 5.1:-29236314 | MS.gene49570:CDS |
| TCCCTGGGGTATAGAAAATA+AGG | 0.331121 | 5.1:+29236155 | None:intergenic |
| TAAGATGGCACAGTCAATTA+AGG | 0.334952 | 5.1:-29238680 | MS.gene49570:CDS |
| CTATATTATTGGCTTTATTA+CGG | 0.335288 | 5.1:-29237233 | MS.gene49570:CDS |
| GTTGCAGGAAGTTGCAAATA+TGG | 0.336219 | 5.1:-29237263 | MS.gene49570:intron |
| CGCCGATGCCATTGCTGCTC+AGG | 0.350306 | 5.1:-29241358 | MS.gene49570:intron |
| GAGAGTGCCGGACTCTTTAC+AGG | 0.356972 | 5.1:-29237200 | MS.gene49570:intron |
| TTTGCCTTAGATTCGGCGTT+TGG | 0.357235 | 5.1:-29241241 | MS.gene49570:intron |
| GTGGTTCCAGCTGCCACCTT+GGG | 0.360760 | 5.1:-29241039 | MS.gene49570:CDS |
| AGCTGCCACCTTGGGTGCTG+TGG | 0.363248 | 5.1:-29241031 | MS.gene49570:CDS |
| TGAAGCTGACCTGTCTAAAC+TGG | 0.370395 | 5.1:+29236339 | None:intergenic |
| GTTGGAAAAGTCCGGGGATC+AGG | 0.371091 | 5.1:-29241403 | MS.gene49570:CDS |
| GTCCTATTCATCGCCGTAAC+TGG | 0.376632 | 5.1:-29242666 | MS.gene49570:intron |
| GACAAACCATAGTAATGAAT+GGG | 0.396947 | 5.1:-29241188 | MS.gene49570:CDS |
| GTAAAGAGTCCGGCACTCTC+CGG | 0.415460 | 5.1:+29237203 | None:intergenic |
| TACCAGTTACGGCGATGAAT+AGG | 0.420588 | 5.1:+29242664 | None:intergenic |
| AAGGAACAACCAAAACTTCC+AGG | 0.426194 | 5.1:-29236607 | MS.gene49570:CDS |
| TAGAAGAACACCTGAAATCC+TGG | 0.436728 | 5.1:+29236559 | None:intergenic |
| AATCACTCTTCAACCCTCCC+TGG | 0.449055 | 5.1:+29236139 | None:intergenic |
| AGCTTCAGATACTATTGTGC+CGG | 0.449268 | 5.1:-29236323 | MS.gene49570:CDS |
| GTGAAAGGGTTGGAAAAGTC+CGG | 0.450195 | 5.1:-29241411 | MS.gene49570:CDS |
| ATCCAAAATTTGAATTCTCT+GGG | 0.454696 | 5.1:+29238723 | None:intergenic |
| TTGCAGGAAGTTGCAAATAT+GGG | 0.456775 | 5.1:-29237262 | MS.gene49570:intron |
| TGTGGTTCCAGCTGCCACCT+TGG | 0.458676 | 5.1:-29241040 | MS.gene49570:CDS |
| ACAGCACCCAAGGTGGCAGC+TGG | 0.465085 | 5.1:+29241033 | None:intergenic |
| AGACAAACCATAGTAATGAA+TGG | 0.473819 | 5.1:-29241189 | MS.gene49570:CDS |
| TCTCTCTAACGCCATGGCTA+TGG | 0.474338 | 5.1:-29242718 | None:intergenic |
| AGGTAATTTGTCATCTCTTG+TGG | 0.475135 | 5.1:-29241058 | MS.gene49570:CDS |
| TGGCTTATCATAGTGGAATT+GGG | 0.475754 | 5.1:-29242698 | MS.gene49570:CDS |
| ATCACTCTTCAACCCTCCCT+GGG | 0.483896 | 5.1:+29236140 | None:intergenic |
| ACTAGTATGCTCACATATCC+AGG | 0.485153 | 5.1:-29236577 | MS.gene49570:CDS |
| TAAAGAGTCCGGCACTCTCC+GGG | 0.489134 | 5.1:+29237204 | None:intergenic |
| GCTGCCACCTTGGGTGCTGT+GGG | 0.493152 | 5.1:-29241030 | MS.gene49570:CDS |
| TGCTCATAGGCACTAGTGAA+AGG | 0.502471 | 5.1:-29241426 | MS.gene49570:intron |
| GCTTTATTACGGCAAATGCC+CGG | 0.508354 | 5.1:-29237222 | MS.gene49570:CDS |
| GCTCATAGGCACTAGTGAAA+GGG | 0.511781 | 5.1:-29241425 | MS.gene49570:intron |
| GGAAGTTGCAAATATGGGAT+TGG | 0.520895 | 5.1:-29237257 | MS.gene49570:CDS |
| GGCAAATGCCCGGAGAGTGC+CGG | 0.523005 | 5.1:-29237212 | MS.gene49570:CDS |
| TGAAAGGGTTGGAAAAGTCC+GGG | 0.525822 | 5.1:-29241410 | MS.gene49570:CDS |
| TTCACCTTCAGCCTGATCCC+CGG | 0.530274 | 5.1:+29241392 | None:intergenic |
| AGCAGCGAAGGCCGTTGTTG+AGG | 0.531539 | 5.1:-29236279 | MS.gene49570:intron |
| GAAGAAGGAAGTACCAGTTA+CGG | 0.533263 | 5.1:+29242653 | None:intergenic |
| AGTCATTGTCCAGTTTAGAC+AGG | 0.534631 | 5.1:-29236348 | MS.gene49570:CDS |
| GCAACACACGGTGGCAATGT+TGG | 0.540840 | 5.1:-29237997 | MS.gene49570:intron |
| GTTTGTTACCTGAGCAGCAA+TGG | 0.542711 | 5.1:+29241350 | None:intergenic |
| CTGAGCAGCAATGGCATCGG+CGG | 0.543224 | 5.1:+29241359 | None:intergenic |
| AATGCGCAAACAATATAAGA+TGG | 0.548314 | 5.1:-29238695 | MS.gene49570:CDS |
| TTATGGTTACATGTGGTTGA+AGG | 0.557263 | 5.1:-29241007 | MS.gene49570:intron |
| ATGGCTATGGCTTATCATAG+TGG | 0.557647 | 5.1:-29242705 | MS.gene49570:CDS |
| GCTTCAGATACTATTGTGCC+GGG | 0.558234 | 5.1:-29236322 | MS.gene49570:CDS |
| GGCAAATTATCTGATTTGAT+CGG | 0.562791 | 5.1:-29242526 | MS.gene49570:CDS |
| ATACCCACCTGTAAAGAGTC+CGG | 0.564924 | 5.1:+29237193 | None:intergenic |
| GGGGATCAGGCTGAAGGTGA+AGG | 0.565982 | 5.1:-29241390 | MS.gene49570:CDS |
| ACCATAACCCACAGCACCCA+AGG | 0.581009 | 5.1:+29241023 | None:intergenic |
| ATAGGCACTAGTGAAAGGGT+TGG | 0.586495 | 5.1:-29241421 | MS.gene49570:intron |
| AAGTCCGGGGATCAGGCTGA+AGG | 0.588920 | 5.1:-29241396 | MS.gene49570:CDS |
| AGCATACTAGTAGACCTCCC+TGG | 0.594208 | 5.1:+29236589 | None:intergenic |
| TACCTGAGCAGCAATGGCAT+CGG | 0.596170 | 5.1:+29241356 | None:intergenic |
| TACGGCGATGAATAGGACCT+TGG | 0.596397 | 5.1:+29242671 | None:intergenic |
| ATATACCCTCTCAGGATGGA+AGG | 0.598299 | 5.1:-29237469 | MS.gene49570:intron |
| CTGTGGGTTATGGTTACATG+TGG | 0.610059 | 5.1:-29241014 | MS.gene49570:CDS |
| AGGAACAACCAAAACTTCCA+GGG | 0.613013 | 5.1:-29236606 | MS.gene49570:CDS |
| ATAATCTAGAGAAGCAGCGA+AGG | 0.617542 | 5.1:-29236291 | MS.gene49570:CDS |
| CTTGAGCGTCGTGCAACACA+CGG | 0.625766 | 5.1:-29238009 | MS.gene49570:CDS |
| GTACGTGACTAAACGCAACA+TGG | 0.628631 | 5.1:-29240738 | MS.gene49570:CDS |
| ACAAACCATAGTAATGAATG+GGG | 0.647379 | 5.1:-29241187 | MS.gene49570:CDS |
| TAGTGGAATTGGGATCTCCA+AGG | 0.658791 | 5.1:-29242688 | MS.gene49570:CDS |
| TCAGATACTATTGTGCCGGG+TGG | 0.669543 | 5.1:-29236319 | MS.gene49570:CDS |
| GCTAAATCAAACCTCAACAA+CGG | 0.699768 | 5.1:+29236268 | None:intergenic |
| TCTAGATTATCCAAACCACC+CGG | 0.701858 | 5.1:+29236304 | None:intergenic |
| GAAAGGGTTGGAAAAGTCCG+GGG | 0.701993 | 5.1:-29241409 | MS.gene49570:CDS |
| ACTATGATAAGCCATAGCCA+TGG | 0.702387 | 5.1:+29242707 | None:intergenic |
| ACTTACAGCAATGACATCCG+AGG | 0.707335 | 5.1:+29240676 | None:intergenic |
| TCACTCTTCAACCCTCCCTG+GGG | 0.720310 | 5.1:+29236141 | None:intergenic |
| CAAACCATAGTAATGAATGG+GGG | 0.730627 | 5.1:-29241186 | MS.gene49570:CDS |
| AACAACCAAAACTTCCAGGG+AGG | 0.731667 | 5.1:-29236603 | MS.gene49570:CDS |
| ATAACCCACAGCACCCAAGG+TGG | 0.751370 | 5.1:+29241026 | None:intergenic |
| GAGCGTCGTGCAACACACGG+TGG | 0.761870 | 5.1:-29238006 | MS.gene49570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAACTTTAATAAAAA+AGG | - | chr5.1:29239118-29239137 | MS.gene49570:intron | 10.0% |
| !! | ACAATTTATATATATATGAT+TGG | - | chr5.1:29240737-29240756 | MS.gene49570:CDS | 10.0% |
| !!! | TATTTGTTTATTTTTATTAG+TGG | - | chr5.1:29241680-29241699 | MS.gene49570:intron | 10.0% |
| !! | AATGTAATTGATATAGTAAT+GGG | - | chr5.1:29239168-29239187 | MS.gene49570:intron | 15.0% |
| !! | ATTGATAAAGTTACTATTAT+AGG | - | chr5.1:29238437-29238456 | MS.gene49570:intron | 15.0% |
| !! | CCTTAAATTTATTCTTAAAA+CGG | - | chr5.1:29239809-29239828 | MS.gene49570:intron | 15.0% |
| !! | CTTAAATTTATTCTTAAAAC+GGG | - | chr5.1:29239810-29239829 | MS.gene49570:intron | 15.0% |
| !! | TAATGTAATTGATATAGTAA+TGG | - | chr5.1:29239167-29239186 | MS.gene49570:intron | 15.0% |
| !! | TTTATTAATATTGGAATGTT+GGG | - | chr5.1:29240579-29240598 | MS.gene49570:intron | 15.0% |
| !!! | ACGTTTTTTTGAAATAAAAA+AGG | + | chr5.1:29241861-29241880 | None:intergenic | 15.0% |
| !!! | TAAACCTTAGTTAATTTTTT+TGG | + | chr5.1:29238727-29238746 | None:intergenic | 15.0% |
| !!! | TTATAGTTTTATTTTTCTCT+TGG | + | chr5.1:29238675-29238694 | None:intergenic | 15.0% |
| !!! | TTATATATTTTTTTGCTCAT+AGG | - | chr5.1:29237414-29237433 | MS.gene49570:intron | 15.0% |
| !!! | TTTACAAAATTTTGAAAACA+TGG | + | chr5.1:29241993-29242012 | None:intergenic | 15.0% |
| !!! | TTTTAAAATCATTCTGTAAT+TGG | + | chr5.1:29239432-29239451 | None:intergenic | 15.0% |
| !! | AAAATAGATAACAAAGTACA+AGG | + | chr5.1:29242320-29242339 | None:intergenic | 20.0% |
| !! | AAACTACTTTGCAAATTTAA+AGG | + | chr5.1:29241452-29241471 | None:intergenic | 20.0% |
| !! | AAATCACTCATAAACATAAA+CGG | + | chr5.1:29238002-29238021 | None:intergenic | 20.0% |
| !! | AACTACTTTGCAAATTTAAA+GGG | + | chr5.1:29241451-29241470 | None:intergenic | 20.0% |
| !! | AACTTTAATAAAAAAGGAGT+AGG | - | chr5.1:29239124-29239143 | MS.gene49570:intron | 20.0% |
| !! | AAGAAAAGTAAAGTGAAATT+TGG | + | chr5.1:29236380-29236399 | None:intergenic | 20.0% |
| !! | AAGAATGATTCAAATAAAAG+TGG | + | chr5.1:29241357-29241376 | None:intergenic | 20.0% |
| !! | ACATTTAAAAAATCAATGAG+AGG | + | chr5.1:29237760-29237779 | None:intergenic | 20.0% |
| !! | ACTATTATAGGTTGTATTAT+AGG | - | chr5.1:29238449-29238468 | MS.gene49570:intron | 20.0% |
| !! | AGAAGCAATTAAAATTTAGA+AGG | + | chr5.1:29240073-29240092 | None:intergenic | 20.0% |
| !! | AGGTTTATGAGAATAAAAAT+AGG | - | chr5.1:29238740-29238759 | MS.gene49570:CDS | 20.0% |
| !! | AGTTAAATCAGTATTATTGT+TGG | + | chr5.1:29241565-29241584 | None:intergenic | 20.0% |
| !! | ATAGTAACTTTATCAATAGA+AGG | + | chr5.1:29238434-29238453 | None:intergenic | 20.0% |
| !! | CTTTATTAATATTGGAATGT+TGG | - | chr5.1:29240578-29240597 | MS.gene49570:intron | 20.0% |
| !! | GTAAATATACCATGTAATAT+GGG | + | chr5.1:29238854-29238873 | None:intergenic | 20.0% |
| !! | GTTAAATCAGTATTATTGTT+GGG | + | chr5.1:29241564-29241583 | None:intergenic | 20.0% |
| !! | TAAATCTGAATTATGATCTA+TGG | - | chr5.1:29241171-29241190 | MS.gene49570:intron | 20.0% |
| !! | TAACTAACTCGTAAAATTAT+AGG | + | chr5.1:29240627-29240646 | None:intergenic | 20.0% |
| !! | TCAAAATCAATAACTTCTAA+AGG | + | chr5.1:29240410-29240429 | None:intergenic | 20.0% |
| !! | TCAACCAAAAAAATTAACTA+AGG | - | chr5.1:29238720-29238739 | MS.gene49570:CDS | 20.0% |
| !! | TCAATTCAAAGATTTAACAT+GGG | - | chr5.1:29240010-29240029 | MS.gene49570:intron | 20.0% |
| !! | TGTTGCATCTTTATTAATAT+TGG | - | chr5.1:29240570-29240589 | MS.gene49570:intron | 20.0% |
| !! | TTTGGATAATTAAGAGTAAA+TGG | - | chr5.1:29239707-29239726 | MS.gene49570:intron | 20.0% |
| !!! | ATGATTTTAAAAAACCATCA+AGG | - | chr5.1:29239440-29239459 | MS.gene49570:intron | 20.0% |
| !!! | ATGTTATATCTTGTATTTTC+AGG | - | chr5.1:29242212-29242231 | MS.gene49570:intron | 20.0% |
| !!! | CAAATGATAGTTTTGTTTTT+TGG | + | chr5.1:29241036-29241055 | None:intergenic | 20.0% |
| !!! | CCGTTTTAAGAATAAATTTA+AGG | + | chr5.1:29239812-29239831 | None:intergenic | 20.0% |
| !!! | CTATATTATTGGCTTTATTA+CGG | - | chr5.1:29241620-29241639 | MS.gene49570:intron | 20.0% |
| !!! | TACCAATTTTAGTTGTTTTT+AGG | + | chr5.1:29238782-29238801 | None:intergenic | 20.0% |
| !!! | TAGAGAAAAATAACTTGTTT+TGG | - | chr5.1:29236728-29236747 | MS.gene49570:intron | 20.0% |
| !!! | TATAATTTTACGAGTTAGTT+AGG | - | chr5.1:29240626-29240645 | MS.gene49570:intron | 20.0% |
| !!! | TGTTATATCTTGTATTTTCA+GGG | - | chr5.1:29242213-29242232 | MS.gene49570:intron | 20.0% |
| !!! | TTTACTGTTCAAAAGTATAT+AGG | - | chr5.1:29239507-29239526 | MS.gene49570:intron | 20.0% |
| ! | AAGTATTTCTTGCTTCATAA+AGG | - | chr5.1:29237945-29237964 | MS.gene49570:intron | 25.0% |
| ! | AATAGAAGGAAAAAAACTCT+AGG | + | chr5.1:29238420-29238439 | None:intergenic | 25.0% |
| ! | AATATAATGTGCTTCTATAC+TGG | - | chr5.1:29239405-29239424 | MS.gene49570:intron | 25.0% |
| ! | AATTCACATGTCAAATTCTA+CGG | - | chr5.1:29236413-29236432 | MS.gene49570:intron | 25.0% |
| ! | AGAATATTCAATGCAGTAAA+TGG | + | chr5.1:29238205-29238224 | None:intergenic | 25.0% |
| ! | AGTATTTCTTGCTTCATAAA+GGG | - | chr5.1:29237946-29237965 | MS.gene49570:intron | 25.0% |
| ! | ATCCAAAATTTGAATTCTCT+GGG | + | chr5.1:29240133-29240152 | None:intergenic | 25.0% |
| ! | ATGTTTGAATTCATGATGTT+TGG | - | chr5.1:29240880-29240899 | MS.gene49570:intron | 25.0% |
| ! | ATTATAGGAAGACTTGAATT+GGG | - | chr5.1:29238464-29238483 | MS.gene49570:intron | 25.0% |
| ! | CGTAAATATACCATGTAATA+TGG | + | chr5.1:29238855-29238874 | None:intergenic | 25.0% |
| ! | CTCAATTCAAAGATTTAACA+TGG | - | chr5.1:29240009-29240028 | MS.gene49570:intron | 25.0% |
| ! | GGTACAAAGTAAAAACAAAA+TGG | + | chr5.1:29241972-29241991 | None:intergenic | 25.0% |
| ! | GTAATAGTTTCATTACTTTG+TGG | - | chr5.1:29237899-29237918 | MS.gene49570:intron | 25.0% |
| ! | TAAGTAAGATAAACTCTCTT+TGG | - | chr5.1:29240477-29240496 | MS.gene49570:intron | 25.0% |
| ! | TATAAGTTGTTTATCGAAAC+AGG | + | chr5.1:29236831-29236850 | None:intergenic | 25.0% |
| ! | TATTATAGGAAGACTTGAAT+TGG | - | chr5.1:29238463-29238482 | MS.gene49570:intron | 25.0% |
| ! | TGGCTTATTAATTGTTAATG+TGG | - | chr5.1:29240900-29240919 | MS.gene49570:intron | 25.0% |
| ! | TTAATAATTAAGCCACTAGA+TGG | + | chr5.1:29242193-29242212 | None:intergenic | 25.0% |
| ! | TTTGAAAACAATACTGTTTC+AGG | - | chr5.1:29242026-29242045 | MS.gene49570:intron | 25.0% |
| !! | TAGTCTGTCATTTGATAATA+CGG | - | chr5.1:29242362-29242381 | MS.gene49570:intron | 25.0% |
| !! | TAGTTTAGAGTTATGAAGAA+GGG | - | chr5.1:29240931-29240950 | MS.gene49570:intron | 25.0% |
| !!! | AAGGTTTCAGATTTTTTTCT+GGG | - | chr5.1:29236553-29236572 | MS.gene49570:intron | 25.0% |
| !!! | AGAAAAATAACTTGTTTTGG+TGG | - | chr5.1:29236731-29236750 | MS.gene49570:intron | 25.0% |
| !!! | ATAATACTGATTTAACTGTG+TGG | - | chr5.1:29241568-29241587 | MS.gene49570:intron | 25.0% |
| !!! | ATTGCAACATTCCAATTTTT+TGG | + | chr5.1:29237331-29237350 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTCCTTAATATGA+GGG | - | chr5.1:29239913-29239932 | MS.gene49570:intron | 25.0% |
| !!! | ATTTTTAGTCTTTTGATGCT+AGG | - | chr5.1:29237349-29237368 | MS.gene49570:intron | 25.0% |
| !!! | GTTGTTTTTATACGCTATAT+TGG | - | chr5.1:29237179-29237198 | MS.gene49570:intron | 25.0% |
| !!! | TAAGGTTTCAGATTTTTTTC+TGG | - | chr5.1:29236552-29236571 | MS.gene49570:intron | 25.0% |
| !!! | TTGCAACATTCCAATTTTTT+GGG | + | chr5.1:29237330-29237349 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTGGTGTAAAC+CGG | + | chr5.1:29241026-29241045 | None:intergenic | 25.0% |
| AAATAGGTCATAAACCTCAT+TGG | - | chr5.1:29238756-29238775 | MS.gene49570:intron | 30.0% | |
| AAATATCTCCAGAAAAACAG+TGG | + | chr5.1:29239973-29239992 | None:intergenic | 30.0% | |
| AAATTAAATCCAAAAGCCGA+TGG | + | chr5.1:29239065-29239084 | None:intergenic | 30.0% | |
| AACTATTCCAAGACATATAG+GGG | - | chr5.1:29239623-29239642 | MS.gene49570:intron | 30.0% | |
| AATAAGTTGTTTGTCCAAAC+AGG | + | chr5.1:29237058-29237077 | None:intergenic | 30.0% | |
| AATATCTCCAGAAAAACAGT+GGG | + | chr5.1:29239972-29239991 | None:intergenic | 30.0% | |
| AATCACAAAGTTTCTGATGT+GGG | - | chr5.1:29238920-29238939 | MS.gene49570:intron | 30.0% | |
| AATGCGCAAACAATATAAGA+TGG | - | chr5.1:29240158-29240177 | MS.gene49570:intron | 30.0% | |
| AATGTTCTGCTTTCATAACT+TGG | - | chr5.1:29242417-29242436 | MS.gene49570:intron | 30.0% | |
| ACAAACCATAGTAATGAATG+GGG | - | chr5.1:29237666-29237685 | MS.gene49570:intron | 30.0% | |
| ACACATTTGAAAAAGTTGAC+AGG | + | chr5.1:29239036-29239055 | None:intergenic | 30.0% | |
| ACATAATCTATTCAATGCCT+GGG | - | chr5.1:29241515-29241534 | MS.gene49570:intron | 30.0% | |
| ACATTGTAATACTCTTGTAC+AGG | - | chr5.1:29240781-29240800 | MS.gene49570:intron | 30.0% | |
| ACTTCAATTCCCATATTACA+TGG | - | chr5.1:29238842-29238861 | MS.gene49570:intron | 30.0% | |
| AGAAAATGACTCCAAATTTG+TGG | + | chr5.1:29236703-29236722 | None:intergenic | 30.0% | |
| AGACAAACCATAGTAATGAA+TGG | - | chr5.1:29237664-29237683 | MS.gene49570:intron | 30.0% | |
| AGGCCTATATTTATCTAGTT+GGG | + | chr5.1:29237038-29237057 | None:intergenic | 30.0% | |
| AGTCTATAGTCCTAATAAGT+AGG | - | chr5.1:29241299-29241318 | MS.gene49570:intron | 30.0% | |
| ATAGAAATCTTACATACCCT+AGG | - | chr5.1:29239681-29239700 | MS.gene49570:intron | 30.0% | |
| ATATCAAACGTTATGTCAAG+AGG | + | chr5.1:29238331-29238350 | None:intergenic | 30.0% | |
| ATATTCTTGAGTTCGATTCA+TGG | + | chr5.1:29236624-29236643 | None:intergenic | 30.0% | |
| ATCATCTGTCTTGTGAAAAA+AGG | + | chr5.1:29238394-29238413 | None:intergenic | 30.0% | |
| ATGAGTGAACTTAATTCAAC+CGG | - | chr5.1:29238516-29238535 | MS.gene49570:intron | 30.0% | |
| ATGGGATTGGACTATATTAT+TGG | - | chr5.1:29241609-29241628 | MS.gene49570:intron | 30.0% | |
| ATTGTGACAATAAATGCCTT+TGG | - | chr5.1:29236674-29236693 | MS.gene49570:intron | 30.0% | |
| CAACTATTCCAAGACATATA+GGG | - | chr5.1:29239622-29239641 | MS.gene49570:intron | 30.0% | |
| CAATTTCAATTCCATTATCC+AGG | + | chr5.1:29240697-29240716 | None:intergenic | 30.0% | |
| CAGAAACTTTGTGATTGATA+AGG | + | chr5.1:29238916-29238935 | None:intergenic | 30.0% | |
| CATCCAAAATTTGAATTCTC+TGG | + | chr5.1:29240134-29240153 | None:intergenic | 30.0% | |
| CCAAATGTTTCAGTTATGTA+TGG | - | chr5.1:29241752-29241771 | MS.gene49570:intron | 30.0% | |
| CCATACATAACTGAAACATT+TGG | + | chr5.1:29241755-29241774 | None:intergenic | 30.0% | |
| CTCATATTAAGGACAACAAA+TGG | + | chr5.1:29239914-29239933 | None:intergenic | 30.0% | |
| GAAAATGACTCCAAATTTGT+GGG | + | chr5.1:29236702-29236721 | None:intergenic | 30.0% | |
| GACAAACCATAGTAATGAAT+GGG | - | chr5.1:29237665-29237684 | MS.gene49570:intron | 30.0% | |
| GACAAATTACCTACAGAAAA+GGG | + | chr5.1:29237787-29237806 | None:intergenic | 30.0% | |
| GACATTCACAATTGCTTTAT+AGG | + | chr5.1:29239466-29239485 | None:intergenic | 30.0% | |
| GATCTTCCAAACAAAAGAAA+CGG | + | chr5.1:29241492-29241511 | None:intergenic | 30.0% | |
| GGCCTAAAAACAACTAAAAT+TGG | - | chr5.1:29238777-29238796 | MS.gene49570:intron | 30.0% | |
| GGTCACATGTATCTTTATAT+AGG | + | chr5.1:29240246-29240265 | None:intergenic | 30.0% | |
| GGTGTATATATTTATCGAGT+TGG | - | chr5.1:29239189-29239208 | MS.gene49570:intron | 30.0% | |
| GTGTAAACATAAATCGATAG+TGG | - | chr5.1:29242101-29242120 | MS.gene49570:intron | 30.0% | |
| TAACATGCTTACATTCTAAG+TGG | - | chr5.1:29242653-29242672 | MS.gene49570:intron | 30.0% | |
| TACATAATCTATTCAATGCC+TGG | - | chr5.1:29241514-29241533 | MS.gene49570:intron | 30.0% | |
| TACTATGCAACCTACTTATT+AGG | + | chr5.1:29241312-29241331 | None:intergenic | 30.0% | |
| TAGAAATCTTACATACCCTA+GGG | - | chr5.1:29239682-29239701 | MS.gene49570:intron | 30.0% | |
| TAGATAAATATAGGCCTGTT+TGG | - | chr5.1:29237041-29237060 | MS.gene49570:intron | 30.0% | |
| TATATGTCTTGGAATAGTTG+AGG | + | chr5.1:29239622-29239641 | None:intergenic | 30.0% | |
| TATTCTTGAGTTCGATTCAT+GGG | + | chr5.1:29236623-29236642 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATACAAAC+AGG | - | chr5.1:29237304-29237323 | MS.gene49570:intron | 30.0% | |
| TCAAATGTGTCAATTACCAT+CGG | - | chr5.1:29239046-29239065 | MS.gene49570:intron | 30.0% | |
| TCAACTATTCCAAGACATAT+AGG | - | chr5.1:29239621-29239640 | MS.gene49570:intron | 30.0% | |
| TCTATGTAGACTTACCTATA+AGG | - | chr5.1:29240342-29240361 | MS.gene49570:intron | 30.0% | |
| TCTCCCAACTAGATAAATAT+AGG | - | chr5.1:29237032-29237051 | MS.gene49570:intron | 30.0% | |
| TGAATTGAGTGCATAATGAT+GGG | + | chr5.1:29239998-29240017 | None:intergenic | 30.0% | |
| TGACAAATTACCTACAGAAA+AGG | + | chr5.1:29237788-29237807 | None:intergenic | 30.0% | |
| TGTGTATCCAAAAATCTGTT+TGG | + | chr5.1:29240267-29240286 | None:intergenic | 30.0% | |
| TGTTAAAAACTGTTGCAGTT+TGG | + | chr5.1:29239780-29239799 | None:intergenic | 30.0% | |
| TGTTTCAGTTATGTATGGTT+TGG | - | chr5.1:29241757-29241776 | MS.gene49570:intron | 30.0% | |
| TTAATTATCCAAAGTCCCTA+GGG | + | chr5.1:29239700-29239719 | None:intergenic | 30.0% | |
| TTGAAGCATACTATACTGTA+GGG | - | chr5.1:29238487-29238506 | MS.gene49570:intron | 30.0% | |
| TTGAATTGAGTGCATAATGA+TGG | + | chr5.1:29239999-29240018 | None:intergenic | 30.0% | |
| TTTCCAGTGTTAAAAGAGAT+AGG | + | chr5.1:29239649-29239668 | None:intergenic | 30.0% | |
| ! | AAATAGTTTGAGACTTGGTT+CGG | + | chr5.1:29239336-29239355 | None:intergenic | 30.0% |
| ! | AATGTTTTTCCCTTTTCTGT+AGG | - | chr5.1:29237775-29237794 | MS.gene49570:intron | 30.0% |
| ! | AGTCTGTCATTTGATAATAC+GGG | - | chr5.1:29242363-29242382 | MS.gene49570:intron | 30.0% |
| ! | ATCAATCCGTTTCTTTTGTT+TGG | - | chr5.1:29241483-29241502 | MS.gene49570:intron | 30.0% |
| ! | CTAGTTTAGAGTTATGAAGA+AGG | - | chr5.1:29240930-29240949 | MS.gene49570:intron | 30.0% |
| ! | CTGAAACATTTGGTAATAAC+AGG | + | chr5.1:29241745-29241764 | None:intergenic | 30.0% |
| ! | GGCAAATTATCTGATTTGAT+CGG | - | chr5.1:29236327-29236346 | MS.gene49570:CDS | 30.0% |
| ! | TCTTTGCAGATAAATGGATT+AGG | - | chr5.1:29240381-29240400 | MS.gene49570:intron | 30.0% |
| ! | TTCTATTTTGTCATCTAGTG+TGG | - | chr5.1:29237709-29237728 | MS.gene49570:intron | 30.0% |
| ! | TTGCTGTCACAATATTTTTC+CGG | - | chr5.1:29239733-29239752 | MS.gene49570:intron | 30.0% |
| ! | TTGCTTCTCAATGTTTTTCA+TGG | - | chr5.1:29240085-29240104 | MS.gene49570:intron | 30.0% |
| ! | TTTGAAGCTTATAACACAAG+TGG | - | chr5.1:29237076-29237095 | MS.gene49570:intron | 30.0% |
| ! | TTTGATGCTAGGATTTGTTT+CGG | - | chr5.1:29237360-29237379 | MS.gene49570:intron | 30.0% |
| !! | AAATGTCAGTTCTAGATACA+AGG | + | chr5.1:29242140-29242159 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5.1:29237270-29237289 | None:intergenic | 30.0% |
| !! | CATTTGTTGTCCTTAATATG+AGG | - | chr5.1:29239912-29239931 | MS.gene49570:intron | 30.0% |
| !! | GCTATTTCTTTGCAGATAAA+TGG | - | chr5.1:29240375-29240394 | MS.gene49570:intron | 30.0% |
| !! | TGTTTGTATTGGCTTATTTG+AGG | + | chr5.1:29237305-29237324 | None:intergenic | 30.0% |
| !!! | AAATAACTTGTTTTGGTGGT+AGG | - | chr5.1:29236735-29236754 | MS.gene49570:intron | 30.0% |
| !!! | AGGTTTCAGATTTTTTTCTG+GGG | - | chr5.1:29236554-29236573 | MS.gene49570:intron | 30.0% |
| !!! | AGTTATGAAGAAGGGTATTT+TGG | - | chr5.1:29240939-29240958 | MS.gene49570:intron | 30.0% |
| !!! | ATAATTTGCCGTTTTTGAAG+AGG | + | chr5.1:29236317-29236336 | None:intergenic | 30.0% |
| AAAGCAATTGTGAATGTCAG+AGG | - | chr5.1:29239468-29239487 | MS.gene49570:intron | 35.0% | |
| AACTGAGAGAAGAGTAAACA+AGG | - | chr5.1:29241140-29241159 | MS.gene49570:intron | 35.0% | |
| AAGCAATTGTGAATGTCAGA+GGG | - | chr5.1:29239469-29239488 | MS.gene49570:intron | 35.0% | |
| AAGCAGAACATTAAAGCATG+TGG | + | chr5.1:29242409-29242428 | None:intergenic | 35.0% | |
| AAGCCATTCTGTAACCAATA+GGG | + | chr5.1:29240518-29240537 | None:intergenic | 35.0% | |
| AATTGCTTTATAGGCCTTGA+TGG | + | chr5.1:29239457-29239476 | None:intergenic | 35.0% | |
| ACATTTCTTGATCCATCTAG+TGG | - | chr5.1:29242178-29242197 | MS.gene49570:intron | 35.0% | |
| ACTGAGAGAAGAGTAAACAA+GGG | - | chr5.1:29241141-29241160 | MS.gene49570:intron | 35.0% | |
| AGCTATACATAGCTCAAGTT+CGG | - | chr5.1:29239232-29239251 | MS.gene49570:intron | 35.0% | |
| ATGTTATGCATCTTTCCACA+TGG | + | chr5.1:29242639-29242658 | None:intergenic | 35.0% | |
| CAAACCATAGTAATGAATGG+GGG | - | chr5.1:29237667-29237686 | MS.gene49570:intron | 35.0% | |
| CAATCACAAAGTTTCTGATG+TGG | - | chr5.1:29238919-29238938 | MS.gene49570:intron | 35.0% | |
| CAGGCCTATATTTATCTAGT+TGG | + | chr5.1:29237039-29237058 | None:intergenic | 35.0% | |
| CCAGTTATAGCAACTAGAAA+GGG | + | chr5.1:29236801-29236820 | None:intergenic | 35.0% | |
| CTTAATTATCCAAAGTCCCT+AGG | + | chr5.1:29239701-29239720 | None:intergenic | 35.0% | |
| CTTGCAGTCTCATATAATGT+GGG | + | chr5.1:29239891-29239910 | None:intergenic | 35.0% | |
| GACTCTTAAACAGTATAGCA+GGG | + | chr5.1:29239384-29239403 | None:intergenic | 35.0% | |
| GCTAAATCAAACCTCAACAA+CGG | + | chr5.1:29242588-29242607 | None:intergenic | 35.0% | |
| GGTAATAACAGGTTAATGCA+GGG | + | chr5.1:29241734-29241753 | None:intergenic | 35.0% | |
| GTCATGTCATGTCATCATTA+AGG | - | chr5.1:29236534-29236553 | MS.gene49570:intron | 35.0% | |
| GTTCAACTTTGCCTTAGATT+CGG | - | chr5.1:29237605-29237624 | MS.gene49570:intron | 35.0% | |
| GTTGAAGCATACTATACTGT+AGG | - | chr5.1:29238486-29238505 | MS.gene49570:intron | 35.0% | |
| TAAGATGGCACAGTCAATTA+AGG | - | chr5.1:29240173-29240192 | MS.gene49570:intron | 35.0% | |
| TAAGCCATTCTGTAACCAAT+AGG | + | chr5.1:29240519-29240538 | None:intergenic | 35.0% | |
| TACAAACAGGCCCAAAAAAT+TGG | - | chr5.1:29237317-29237336 | MS.gene49570:intron | 35.0% | |
| TAGTTGCTATAACTGGCTAT+AGG | - | chr5.1:29236805-29236824 | MS.gene49570:intron | 35.0% | |
| TATTTCACCAACACAGTTGA+AGG | + | chr5.1:29238355-29238374 | None:intergenic | 35.0% | |
| TGACTCTTAAACAGTATAGC+AGG | + | chr5.1:29239385-29239404 | None:intergenic | 35.0% | |
| TGAGTGAACTTAATTCAACC+GGG | - | chr5.1:29238517-29238536 | MS.gene49570:intron | 35.0% | |
| TGATATTCCTTCAACTGTGT+TGG | - | chr5.1:29238345-29238364 | MS.gene49570:intron | 35.0% | |
| TGGTAATAACAGGTTAATGC+AGG | + | chr5.1:29241735-29241754 | None:intergenic | 35.0% | |
| TGTTATGCATCTTTCCACAT+GGG | + | chr5.1:29242638-29242657 | None:intergenic | 35.0% | |
| TTATGGTTACATGTGGTTGA+AGG | - | chr5.1:29237846-29237865 | MS.gene49570:intron | 35.0% | |
| TTCGAAAATGCACTTGAAAG+AGG | - | chr5.1:29237554-29237573 | MS.gene49570:intron | 35.0% | |
| TTGCAGGAAGTTGCAAATAT+GGG | - | chr5.1:29241591-29241610 | MS.gene49570:intron | 35.0% | |
| TTGCAGTCTCATATAATGTG+GGG | + | chr5.1:29239890-29239909 | None:intergenic | 35.0% | |
| ! | AGGTAATTTGTCATCTCTTG+TGG | - | chr5.1:29237795-29237814 | MS.gene49570:intron | 35.0% |
| ! | ATGATTCCATTTTCACTTGC+AGG | - | chr5.1:29242464-29242483 | MS.gene49570:intron | 35.0% |
| ! | ATGGCTTATCATAGTGGAAT+TGG | - | chr5.1:29236154-29236173 | MS.gene49570:CDS | 35.0% |
| ! | ATGTCATAAGCTCTTTTCAC+GGG | - | chr5.1:29237008-29237027 | MS.gene49570:intron | 35.0% |
| ! | CATGTCATAAGCTCTTTTCA+CGG | - | chr5.1:29237007-29237026 | MS.gene49570:intron | 35.0% |
| ! | CATGTGACCAAACAGATTTT+TGG | - | chr5.1:29240257-29240276 | MS.gene49570:intron | 35.0% |
| ! | CTCGAAAATAGTTTGAGACT+TGG | + | chr5.1:29239341-29239360 | None:intergenic | 35.0% |
| ! | GACCCAGAGAATTCAAATTT+TGG | - | chr5.1:29240128-29240147 | MS.gene49570:intron | 35.0% |
| ! | GTCTGTCATTTGATAATACG+GGG | - | chr5.1:29242364-29242383 | MS.gene49570:intron | 35.0% |
| ! | TATGTATAGCTCGATTCGTT+TGG | + | chr5.1:29239223-29239242 | None:intergenic | 35.0% |
| ! | TGATTCCATTTTCACTTGCA+GGG | - | chr5.1:29242465-29242484 | MS.gene49570:intron | 35.0% |
| ! | TGGCTTATCATAGTGGAATT+GGG | - | chr5.1:29236155-29236174 | MS.gene49570:CDS | 35.0% |
| ! | TTACAATATTTTCCCCCATG+TGG | - | chr5.1:29242621-29242640 | MS.gene49570:intron | 35.0% |
| ! | TTCTCAATGTTTTTCATGGC+AGG | - | chr5.1:29240089-29240108 | MS.gene49570:intron | 35.0% |
| !!! | AAGAAGGGTATTTTGGAGTT+AGG | - | chr5.1:29240946-29240965 | MS.gene49570:intron | 35.0% |
| !!! | GGTTTCAGATTTTTTTCTGG+GGG | - | chr5.1:29236555-29236574 | MS.gene49570:intron | 35.0% |
| !!! | GTCTCAAACTATTTTCGAGT+TGG | - | chr5.1:29239342-29239361 | MS.gene49570:intron | 35.0% |
| !!! | GTTTCAGATTTTTTTCTGGG+GGG | - | chr5.1:29236556-29236575 | MS.gene49570:intron | 35.0% |
| !!! | TAGTTGTTTTTAGGCCAATG+AGG | + | chr5.1:29238773-29238792 | None:intergenic | 35.0% |
| !!! | TCCTTATTTTCTATACCCCA+GGG | - | chr5.1:29242697-29242716 | MS.gene49570:CDS | 35.0% |
| !!! | TTCCTTATTTTCTATACCCC+AGG | - | chr5.1:29242696-29242715 | MS.gene49570:CDS | 35.0% |
| !!! | TTTTTTGGGCCTGTTTGTAT+TGG | + | chr5.1:29237316-29237335 | None:intergenic | 35.0% |
| AAAAACTGTTGCAGTTTGGC+AGG | + | chr5.1:29239776-29239795 | None:intergenic | 40.0% | |
| AAGGAACAACCAAAACTTCC+AGG | - | chr5.1:29242246-29242265 | MS.gene49570:intron | 40.0% | |
| AATTTCCCTTAATCCTCCAC+CGG | - | chr5.1:29239850-29239869 | MS.gene49570:intron | 40.0% | |
| ACTAGTATGCTCACATATCC+AGG | - | chr5.1:29242276-29242295 | MS.gene49570:intron | 40.0% | |
| AGAGAGGAAGAAGAAGAAGA+AGG | + | chr5.1:29236218-29236237 | None:intergenic | 40.0% | |
| AGCAATTGTGAATGTCAGAG+GGG | - | chr5.1:29239470-29239489 | MS.gene49570:intron | 40.0% | |
| AGCTTCAGATACTATTGTGC+CGG | - | chr5.1:29242530-29242549 | MS.gene49570:CDS | 40.0% | |
| AGGAACAACCAAAACTTCCA+GGG | - | chr5.1:29242247-29242266 | MS.gene49570:intron | 40.0% | |
| AGGAACCCTGAAATTTAGAC+AGG | + | chr5.1:29242681-29242700 | None:intergenic | 40.0% | |
| AGTCATTGTCCAGTTTAGAC+AGG | - | chr5.1:29242505-29242524 | MS.gene49570:intron | 40.0% | |
| ATAATCTAGAGAAGCAGCGA+AGG | - | chr5.1:29242562-29242581 | MS.gene49570:intron | 40.0% | |
| ATAGTAATGAATGGGGGTTC+AGG | - | chr5.1:29237673-29237692 | MS.gene49570:intron | 40.0% | |
| ATGGCTATGGCTTATCATAG+TGG | - | chr5.1:29236148-29236167 | MS.gene49570:CDS | 40.0% | |
| ATTGGACGAAAGTAAAGCTG+TGG | - | chr5.1:29240755-29240774 | MS.gene49570:CDS | 40.0% | |
| CAACTCAAGTTCGACTCATT+TGG | - | chr5.1:29239281-29239300 | MS.gene49570:intron | 40.0% | |
| CAGAACATTAAAGCATGTGG+AGG | + | chr5.1:29242406-29242425 | None:intergenic | 40.0% | |
| CGACTCGATAAGAATCAAGT+CGG | - | chr5.1:29238542-29238561 | MS.gene49570:intron | 40.0% | |
| CGTTCTCCTTCTCAATATCA+GGG | - | chr5.1:29238071-29238090 | MS.gene49570:intron | 40.0% | |
| CTTTATATAGGTGCAAGTGC+AGG | + | chr5.1:29240234-29240253 | None:intergenic | 40.0% | |
| GAATTCAGTGCTTGAGAATC+AGG | - | chr5.1:29241409-29241428 | MS.gene49570:CDS | 40.0% | |
| GATGGAGAGCTTATGGTAAT+AGG | - | chr5.1:29236966-29236985 | MS.gene49570:intron | 40.0% | |
| GCCAACTTCATGAAAACCTA+TGG | - | chr5.1:29239533-29239552 | MS.gene49570:intron | 40.0% | |
| GCCAGTTATAGCAACTAGAA+AGG | + | chr5.1:29236802-29236821 | None:intergenic | 40.0% | |
| GCTTGCAGTCTCATATAATG+TGG | + | chr5.1:29239892-29239911 | None:intergenic | 40.0% | |
| GGAAGTTGCAAATATGGGAT+TGG | - | chr5.1:29241596-29241615 | MS.gene49570:intron | 40.0% | |
| GGTAGTTAATTCGTCGAACA+TGG | + | chr5.1:29239315-29239334 | None:intergenic | 40.0% | |
| GTTACATGTGGTTGAAGGTA+TGG | - | chr5.1:29237851-29237870 | MS.gene49570:intron | 40.0% | |
| GTTATGCATCTTTCCACATG+GGG | + | chr5.1:29242637-29242656 | None:intergenic | 40.0% | |
| GTTGCAGGAAGTTGCAAATA+TGG | - | chr5.1:29241590-29241609 | MS.gene49570:intron | 40.0% | |
| GTTTAGAGATTACTGCGTAC+TGG | + | chr5.1:29239594-29239613 | None:intergenic | 40.0% | |
| TAAGACCCTGCAAGTGAAAA+TGG | + | chr5.1:29242473-29242492 | None:intergenic | 40.0% | |
| TACGTTGTATATACCCTCTC+AGG | - | chr5.1:29241376-29241395 | MS.gene49570:CDS | 40.0% | |
| TAGAAGAACACCTGAAATCC+TGG | + | chr5.1:29242297-29242316 | None:intergenic | 40.0% | |
| TATGGCAATCAATGACCAGA+AGG | - | chr5.1:29239551-29239570 | MS.gene49570:intron | 40.0% | |
| TCAATGCCTGGGAAGAAAAT+GGG | - | chr5.1:29241526-29241545 | MS.gene49570:intron | 40.0% | |
| TCAATTCCATTATCCAGGAC+TGG | + | chr5.1:29240692-29240711 | None:intergenic | 40.0% | |
| TCCCTGGGGTATAGAAAATA+AGG | + | chr5.1:29242701-29242720 | None:intergenic | 40.0% | |
| TCGTTCTCCTTCTCAATATC+AGG | - | chr5.1:29238070-29238089 | MS.gene49570:intron | 40.0% | |
| TCTAGATACAAGGTCCTGTT+TGG | + | chr5.1:29242130-29242149 | None:intergenic | 40.0% | |
| TCTAGATTATCCAAACCACC+CGG | + | chr5.1:29242552-29242571 | None:intergenic | 40.0% | |
| TCTTAAAACGGGTACACATG+AGG | - | chr5.1:29239821-29239840 | MS.gene49570:intron | 40.0% | |
| TCTTGGAATAGTTGAGGTCA+TGG | + | chr5.1:29239616-29239635 | None:intergenic | 40.0% | |
| TGAACCCCCATTCATTACTA+TGG | + | chr5.1:29237674-29237693 | None:intergenic | 40.0% | |
| TGATATTGAGAAGGAGAACG+AGG | + | chr5.1:29238071-29238090 | None:intergenic | 40.0% | |
| TGATTTAACTGTGTGGTTGC+AGG | - | chr5.1:29241575-29241594 | MS.gene49570:intron | 40.0% | |
| TGATTTGATCGGTGATCTTC+AGG | - | chr5.1:29236338-29236357 | MS.gene49570:CDS | 40.0% | |
| TGCAAAGAAATAGCAAGTGC+TGG | + | chr5.1:29240369-29240388 | None:intergenic | 40.0% | |
| TGGCACCTGTCTAAATTTCA+GGG | - | chr5.1:29242673-29242692 | MS.gene49570:CDS | 40.0% | |
| TGGCTTAATAGCATAGCTGT+TGG | - | chr5.1:29240532-29240551 | MS.gene49570:intron | 40.0% | |
| TGTCCTTAATATGAGGGATG+TGG | - | chr5.1:29239919-29239938 | MS.gene49570:intron | 40.0% | |
| TGTTGGGCTCTCTGATTATA+AGG | - | chr5.1:29240595-29240614 | MS.gene49570:intron | 40.0% | |
| TTATGCATCTTTCCACATGG+GGG | + | chr5.1:29242636-29242655 | None:intergenic | 40.0% | |
| TTCAATGCCTGGGAAGAAAA+TGG | - | chr5.1:29241525-29241544 | MS.gene49570:intron | 40.0% | |
| TTGTATATACCCTCTCAGGA+TGG | - | chr5.1:29241380-29241399 | MS.gene49570:CDS | 40.0% | |
| TTTACCCACATTTGCCACAT+TGG | - | chr5.1:29239946-29239965 | MS.gene49570:intron | 40.0% | |
| ! | GAACCCTATTGGTTACAGAA+TGG | - | chr5.1:29240512-29240531 | MS.gene49570:intron | 40.0% |
| ! | GCCATAGGTTTTCATGAAGT+TGG | + | chr5.1:29239537-29239556 | None:intergenic | 40.0% |
| ! | GCTTATTTGAGGTTACGTAC+TGG | + | chr5.1:29237294-29237313 | None:intergenic | 40.0% |
| ! | GGAGGCTTATTATAGTTTGC+CGG | + | chr5.1:29239755-29239774 | None:intergenic | 40.0% |
| ! | GTTCCTGGTAATCTAGAGTT+CGG | - | chr5.1:29236583-29236602 | MS.gene49570:CDS | 40.0% |
| ! | TATTTTCTATACCCCAGGGA+GGG | - | chr5.1:29242701-29242720 | MS.gene49570:CDS | 40.0% |
| ! | TTATTTTCTATACCCCAGGG+AGG | - | chr5.1:29242700-29242719 | MS.gene49570:CDS | 40.0% |
| ! | TTCTGGTCATTGATTGCCAT+AGG | + | chr5.1:29239552-29239571 | None:intergenic | 40.0% |
| ! | TTGAAGGTATGGAACTGCTT+CGG | - | chr5.1:29237862-29237881 | MS.gene49570:intron | 40.0% |
| !! | ATCGATAGTGGAAACCAAAC+AGG | - | chr5.1:29242113-29242132 | MS.gene49570:intron | 40.0% |
| !! | CCCTTTCTAGTTGCTATAAC+TGG | - | chr5.1:29236798-29236817 | MS.gene49570:intron | 40.0% |
| !! | GAAGAAGGAAGTACCAGTTA+CGG | + | chr5.1:29236203-29236222 | None:intergenic | 40.0% |
| !! | GCTTGAGTTGAATAAGACAG+TGG | + | chr5.1:29236482-29236501 | None:intergenic | 40.0% |
| !! | TTTTCAGGGAACTATGCCAA+AGG | - | chr5.1:29242227-29242246 | MS.gene49570:intron | 40.0% |
| !!! | GGAAGTTTTGGTTGTTCCTT+TGG | + | chr5.1:29242246-29242265 | None:intergenic | 40.0% |
| !!! | TGTCAATTACCATCGGCTTT+TGG | - | chr5.1:29239053-29239072 | MS.gene49570:intron | 40.0% |
| !!! | TTTGCCGTTTTTGAAGAGGA+CGG | + | chr5.1:29236313-29236332 | None:intergenic | 40.0% |
| AAAAAAGCTGCAGCATGCCT+CGG | - | chr5.1:29238160-29238179 | MS.gene49570:intron | 45.0% | |
| AACAACCAAAACTTCCAGGG+AGG | - | chr5.1:29242250-29242269 | MS.gene49570:intron | 45.0% | |
| ACTTACAGCAATGACATCCG+AGG | + | chr5.1:29238180-29238199 | None:intergenic | 45.0% | |
| AGAAAAACAGTGGGCCAATG+TGG | + | chr5.1:29239963-29239982 | None:intergenic | 45.0% | |
| AGATAGGCCCCTATATGTCT+TGG | + | chr5.1:29239633-29239652 | None:intergenic | 45.0% | |
| AGCATACTATACTGTAGGGC+TGG | - | chr5.1:29238491-29238510 | MS.gene49570:intron | 45.0% | |
| AGGATTCCATACCCTTCCAA+TGG | + | chr5.1:29238311-29238330 | None:intergenic | 45.0% | |
| ATACCCACCTGTAAAGAGTC+CGG | + | chr5.1:29241663-29241682 | None:intergenic | 45.0% | |
| ATAGGCACTAGTGAAAGGGT+TGG | - | chr5.1:29237432-29237451 | MS.gene49570:intron | 45.0% | |
| ATATACCCTCTCAGGATGGA+AGG | - | chr5.1:29241384-29241403 | MS.gene49570:CDS | 45.0% | |
| ATTCAACCTTCCATCCTGAG+AGG | + | chr5.1:29241393-29241412 | None:intergenic | 45.0% | |
| ATTCATGGGTGGAACAATCC+CGG | + | chr5.1:29236609-29236628 | None:intergenic | 45.0% | |
| CATCAGCTCTTCCATTGGAA+GGG | - | chr5.1:29238297-29238316 | MS.gene49570:intron | 45.0% | |
| CTATGTTTCACTTCCAGTCC+TGG | - | chr5.1:29240676-29240695 | MS.gene49570:intron | 45.0% | |
| CTGCCACATCCCTCATATTA+AGG | + | chr5.1:29239925-29239944 | None:intergenic | 45.0% | |
| CTGTGACTGTTGAACCCTAT+TGG | - | chr5.1:29240501-29240520 | MS.gene49570:intron | 45.0% | |
| CTGTGTAACCTGAAAAGGAG+CGG | + | chr5.1:29236287-29236306 | None:intergenic | 45.0% | |
| CTTAAACAGTATAGCAGGGC+TGG | + | chr5.1:29239380-29239399 | None:intergenic | 45.0% | |
| CTTACATACCCTAGGGACTT+TGG | - | chr5.1:29239689-29239708 | MS.gene49570:intron | 45.0% | |
| CTTTCGTAAGCTATCCTGGA+TGG | - | chr5.1:29236948-29236967 | MS.gene49570:intron | 45.0% | |
| GAAACGCCCTGATATTGAGA+AGG | + | chr5.1:29238080-29238099 | None:intergenic | 45.0% | |
| GATGCTTTCGTAAGCTATCC+TGG | - | chr5.1:29236944-29236963 | MS.gene49570:intron | 45.0% | |
| GCTCACATATCCAGGATTTC+AGG | - | chr5.1:29242284-29242303 | MS.gene49570:intron | 45.0% | |
| GCTCATAGGCACTAGTGAAA+GGG | - | chr5.1:29237428-29237447 | MS.gene49570:intron | 45.0% | |
| GCTTCAGATACTATTGTGCC+GGG | - | chr5.1:29242531-29242550 | MS.gene49570:CDS | 45.0% | |
| GTACGTGACTAAACGCAACA+TGG | - | chr5.1:29238115-29238134 | MS.gene49570:intron | 45.0% | |
| GTGAAAGGGTTGGAAAAGTC+CGG | - | chr5.1:29237442-29237461 | MS.gene49570:intron | 45.0% | |
| GTGGCACCTGTCTAAATTTC+AGG | - | chr5.1:29242672-29242691 | MS.gene49570:CDS | 45.0% | |
| TACCAGTTACGGCGATGAAT+AGG | + | chr5.1:29236192-29236211 | None:intergenic | 45.0% | |
| TAGTGGAATTGGGATCTCCA+AGG | - | chr5.1:29236165-29236184 | MS.gene49570:intron | 45.0% | |
| TATCCTGGATGGAGAGCTTA+TGG | - | chr5.1:29236959-29236978 | MS.gene49570:intron | 45.0% | |
| TCACTTCCAGTCCTGGATAA+TGG | - | chr5.1:29240683-29240702 | MS.gene49570:CDS | 45.0% | |
| TCCAAATTTGTGGGAGCCAA+AGG | + | chr5.1:29236693-29236712 | None:intergenic | 45.0% | |
| TCTTGAGTTCGATTCATGGG+TGG | + | chr5.1:29236620-29236639 | None:intergenic | 45.0% | |
| TGAAAGGGTTGGAAAAGTCC+GGG | - | chr5.1:29237443-29237462 | MS.gene49570:intron | 45.0% | |
| TGAAGCTGACCTGTCTAAAC+TGG | + | chr5.1:29242517-29242536 | None:intergenic | 45.0% | |
| TGCTCATAGGCACTAGTGAA+AGG | - | chr5.1:29237427-29237446 | MS.gene49570:intron | 45.0% | |
| TGGGGTTTACCTTACTCTAC+CGG | + | chr5.1:29239872-29239891 | None:intergenic | 45.0% | |
| TTAAACTCTGCAGTTGTGCG+TGG | - | chr5.1:29240993-29241012 | MS.gene49570:intron | 45.0% | |
| TTACCATAAGCTCTCCATCC+AGG | + | chr5.1:29236965-29236984 | None:intergenic | 45.0% | |
| TTAGCCAAACGCCGAATCTA+AGG | + | chr5.1:29237619-29237638 | None:intergenic | 45.0% | |
| TTCAACCTTCCATCCTGAGA+GGG | + | chr5.1:29241392-29241411 | None:intergenic | 45.0% | |
| TTGCTGCTCAGGTAACAAAC+TGG | - | chr5.1:29237506-29237525 | MS.gene49570:intron | 45.0% | |
| TTTGCCTTAGATTCGGCGTT+TGG | - | chr5.1:29237612-29237631 | MS.gene49570:intron | 45.0% | |
| ! | ATTCAAGTTCCCGAGCAACT+CGG | - | chr5.1:29238621-29238640 | MS.gene49570:intron | 45.0% |
| ! | CTGTGGGTTATGGTTACATG+TGG | - | chr5.1:29237839-29237858 | MS.gene49570:intron | 45.0% |
| ! | GCTTTATTACGGCAAATGCC+CGG | - | chr5.1:29241631-29241650 | MS.gene49570:intron | 45.0% |
| ! | GGGCCTATCTCTTTTAACAC+TGG | - | chr5.1:29239643-29239662 | MS.gene49570:intron | 45.0% |
| ! | GTTTGTTACCTGAGCAGCAA+TGG | + | chr5.1:29237506-29237525 | None:intergenic | 45.0% |
| ! | TGAGAGTCTGTAGAGTGTCT+GGG | - | chr5.1:29238991-29239010 | MS.gene49570:intron | 45.0% |
| ! | TGATTGCCCATTTTCTTCCC+AGG | + | chr5.1:29241535-29241554 | None:intergenic | 45.0% |
| !! | ACATTGGCCCACTGTTTTTC+TGG | - | chr5.1:29239962-29239981 | MS.gene49570:intron | 45.0% |
| !! | GTTTTGGTGGTAGGATCACA+TGG | - | chr5.1:29236744-29236763 | MS.gene49570:intron | 45.0% |
| !! | TACTGGTGTCATTGATTGCC+CGG | + | chr5.1:29239577-29239596 | None:intergenic | 45.0% |
| !! | TAGCAAGTGCTGGTCCTTAT+AGG | + | chr5.1:29240359-29240378 | None:intergenic | 45.0% |
| !! | TCACTTTTCCGCTCCTTTTC+AGG | - | chr5.1:29236276-29236295 | MS.gene49570:intron | 45.0% |
| !! | TTAAATAAATATAAAAAACA+AGG | + | chr5.1:29236442-29236461 | None:intergenic | 5.0% |
| !!! | ATTATTTTAGAAATATTAAA+TGG | + | chr5.1:29238027-29238046 | None:intergenic | 5.0% |
| AACTGTTGCAGTTTGGCAGG+AGG | + | chr5.1:29239773-29239792 | None:intergenic | 50.0% | |
| AATCCTCCACCGGTAGAGTA+AGG | - | chr5.1:29239860-29239879 | MS.gene49570:intron | 50.0% | |
| AATCGAGTCGAGTTCGAGCT+AGG | + | chr5.1:29238604-29238623 | None:intergenic | 50.0% | |
| ACTCTACCGGTGGAGGATTA+AGG | + | chr5.1:29239859-29239878 | None:intergenic | 50.0% | |
| AGCATACTAGTAGACCTCCC+TGG | + | chr5.1:29242267-29242286 | None:intergenic | 50.0% | |
| AGTTGTGCGTGGAGGATATC+CGG | - | chr5.1:29241004-29241023 | MS.gene49570:intron | 50.0% | |
| CAATCAATGACCAGAAGGCC+GGG | - | chr5.1:29239556-29239575 | MS.gene49570:intron | 50.0% | |
| CCATCAGCTCTTCCATTGGA+AGG | - | chr5.1:29238296-29238315 | MS.gene49570:intron | 50.0% | |
| CCTTCCAATGGAAGAGCTGA+TGG | + | chr5.1:29238299-29238318 | None:intergenic | 50.0% | |
| CGATTGTGTGTGTGAGAGAG+AGG | + | chr5.1:29236234-29236253 | None:intergenic | 50.0% | |
| CTCTACCGGTGGAGGATTAA+GGG | + | chr5.1:29239858-29239877 | None:intergenic | 50.0% | |
| GAAAGGGTTGGAAAAGTCCG+GGG | - | chr5.1:29237444-29237463 | MS.gene49570:intron | 50.0% | |
| GATTCTTATCGAGTCGAGCC+CGG | + | chr5.1:29238538-29238557 | None:intergenic | 50.0% | |
| GCAATCAATGACCAGAAGGC+CGG | - | chr5.1:29239555-29239574 | MS.gene49570:intron | 50.0% | |
| GCTCTTCCATTGGAAGGGTA+TGG | - | chr5.1:29238302-29238321 | MS.gene49570:intron | 50.0% | |
| GGCACCGTCCTCTTCAAAAA+CGG | - | chr5.1:29236306-29236325 | MS.gene49570:CDS | 50.0% | |
| GGTGCCTGTGTAACCTGAAA+AGG | + | chr5.1:29236292-29236311 | None:intergenic | 50.0% | |
| GGTTTACCTTACTCTACCGG+TGG | + | chr5.1:29239869-29239888 | None:intergenic | 50.0% | |
| GTCCTATTCATCGCCGTAAC+TGG | - | chr5.1:29236187-29236206 | MS.gene49570:intron | 50.0% | |
| TACCTGAGCAGCAATGGCAT+CGG | + | chr5.1:29237500-29237519 | None:intergenic | 50.0% | |
| TACGGCGATGAATAGGACCT+TGG | + | chr5.1:29236185-29236204 | None:intergenic | 50.0% | |
| TACTATTGTGCCGGGTGGTT+TGG | - | chr5.1:29242539-29242558 | MS.gene49570:CDS | 50.0% | |
| TCAGATACTATTGTGCCGGG+TGG | - | chr5.1:29242534-29242553 | MS.gene49570:CDS | 50.0% | |
| TGGGCCAATGTGGCAAATGT+GGG | + | chr5.1:29239953-29239972 | None:intergenic | 50.0% | |
| TTACCTTACTCTACCGGTGG+AGG | + | chr5.1:29239866-29239885 | None:intergenic | 50.0% | |
| ! | CTGGTAATCTAGAGTTCGGC+CGG | - | chr5.1:29236587-29236606 | MS.gene49570:CDS | 50.0% |
| ! | GCCTTTGGCTCCCACAAATT+TGG | - | chr5.1:29236689-29236708 | MS.gene49570:intron | 50.0% |
| ! | GTAGACCTCCCTGGAAGTTT+TGG | + | chr5.1:29242258-29242277 | None:intergenic | 50.0% |
| ! | GTGAGAGTCTGTAGAGTGTC+TGG | - | chr5.1:29238990-29239009 | MS.gene49570:intron | 50.0% |
| ! | TGGTAATCTAGAGTTCGGCC+GGG | - | chr5.1:29236588-29236607 | MS.gene49570:CDS | 50.0% |
| !!! | CGCTCCTTTTCAGGTTACAC+AGG | - | chr5.1:29236285-29236304 | MS.gene49570:CDS | 50.0% |
| AACTCTGCAGTTGTGCGTGG+AGG | - | chr5.1:29240996-29241015 | MS.gene49570:intron | 55.0% | |
| ACCATAACCCACAGCACCCA+AGG | + | chr5.1:29237833-29237852 | None:intergenic | 55.0% | |
| ATAACCCACAGCACCCAAGG+TGG | + | chr5.1:29237830-29237849 | None:intergenic | 55.0% | |
| CGCACCATCAGCTCTTCCAT+TGG | - | chr5.1:29238292-29238311 | MS.gene49570:intron | 55.0% | |
| CGGCCGAACTCTAGATTACC+AGG | + | chr5.1:29236589-29236608 | None:intergenic | 55.0% | |
| GCAACACACGGTGGCAATGT+TGG | - | chr5.1:29240856-29240875 | MS.gene49570:intron | 55.0% | |
| GTAAAGAGTCCGGCACTCTC+CGG | + | chr5.1:29241653-29241672 | None:intergenic | 55.0% | |
| GTGCCGGACTCTTTACAGGT+GGG | - | chr5.1:29241657-29241676 | MS.gene49570:intron | 55.0% | |
| GTGGGCCAATGTGGCAAATG+TGG | + | chr5.1:29239954-29239973 | None:intergenic | 55.0% | |
| GTTGGAAAAGTCCGGGGATC+AGG | - | chr5.1:29237450-29237469 | MS.gene49570:CDS | 55.0% | |
| TAAAGAGTCCGGCACTCTCC+GGG | + | chr5.1:29241652-29241671 | None:intergenic | 55.0% | |
| TCGAGTCGAACCGAGTTGCT+CGG | + | chr5.1:29238634-29238653 | None:intergenic | 55.0% | |
| TTCACCTTCAGCCTGATCCC+CGG | + | chr5.1:29237464-29237483 | None:intergenic | 55.0% | |
| ! | ACCTTGGGTGCTGTGGGTTA+TGG | - | chr5.1:29237829-29237848 | MS.gene49570:intron | 55.0% |
| ! | AGTGCCGGACTCTTTACAGG+TGG | - | chr5.1:29241656-29241675 | MS.gene49570:intron | 55.0% |
| ! | CTTGAGCGTCGTGCAACACA+CGG | - | chr5.1:29240844-29240863 | MS.gene49570:intron | 55.0% |
| ! | TCATTGATTGCCCGGCCTTC+TGG | + | chr5.1:29239569-29239588 | None:intergenic | 55.0% |
| !! | GAGAGTGCCGGACTCTTTAC+AGG | - | chr5.1:29241653-29241672 | MS.gene49570:intron | 55.0% |
| !! | TTTCTGGGGGGAAGTGTTCC+TGG | - | chr5.1:29236568-29236587 | MS.gene49570:intron | 55.0% |
| AAGTCCGGGGATCAGGCTGA+AGG | - | chr5.1:29237457-29237476 | MS.gene49570:CDS | 60.0% | |
| AGCAGCGAAGGCCGTTGTTG+AGG | - | chr5.1:29242574-29242593 | MS.gene49570:intron | 60.0% | |
| CGAGTCGAACCGAGTTGCTC+GGG | + | chr5.1:29238633-29238652 | None:intergenic | 60.0% | |
| GGGGATCAGGCTGAAGGTGA+AGG | - | chr5.1:29237463-29237482 | MS.gene49570:intron | 60.0% | |
| GTGGTTCCAGCTGCCACCTT+GGG | - | chr5.1:29237814-29237833 | MS.gene49570:intron | 60.0% | |
| TGTGGTTCCAGCTGCCACCT+TGG | - | chr5.1:29237813-29237832 | MS.gene49570:intron | 60.0% | |
| ! | CTGAGCAGCAATGGCATCGG+CGG | + | chr5.1:29237497-29237516 | None:intergenic | 60.0% |
| ACAGCACCCAAGGTGGCAGC+TGG | + | chr5.1:29237823-29237842 | None:intergenic | 65.0% | |
| CGCCGATGCCATTGCTGCTC+AGG | - | chr5.1:29237495-29237514 | MS.gene49570:intron | 65.0% | |
| ! | AGCTGCCACCTTGGGTGCTG+TGG | - | chr5.1:29237822-29237841 | MS.gene49570:intron | 65.0% |
| ! | GAGCGTCGTGCAACACACGG+TGG | - | chr5.1:29240847-29240866 | MS.gene49570:intron | 65.0% |
| ! | GCTGCCACCTTGGGTGCTGT+GGG | - | chr5.1:29237823-29237842 | MS.gene49570:intron | 65.0% |
| ! | GGCAAATGCCCGGAGAGTGC+CGG | - | chr5.1:29241641-29241660 | MS.gene49570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 29236148 | 29242727 | 29236148 | ID=MS.gene49570 |
| chr5.1 | mRNA | 29236148 | 29242727 | 29236148 | ID=MS.gene49570.t1;Parent=MS.gene49570 |
| chr5.1 | exon | 29242667 | 29242727 | 29242667 | ID=MS.gene49570.t1.exon1;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29242667 | 29242727 | 29242667 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29242516 | 29242577 | 29242516 | ID=MS.gene49570.t1.exon2;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29242516 | 29242577 | 29242516 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29241359 | 29241439 | 29241359 | ID=MS.gene49570.t1.exon3;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29241359 | 29241439 | 29241359 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29241172 | 29241253 | 29241172 | ID=MS.gene49570.t1.exon4;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29241172 | 29241253 | 29241172 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29241008 | 29241078 | 29241008 | ID=MS.gene49570.t1.exon5;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29241008 | 29241078 | 29241008 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29240682 | 29240783 | 29240682 | ID=MS.gene49570.t1.exon6;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29240682 | 29240783 | 29240682 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29238675 | 29238764 | 29238675 | ID=MS.gene49570.t1.exon7;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29238675 | 29238764 | 29238675 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29237998 | 29238072 | 29237998 | ID=MS.gene49570.t1.exon8;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29237998 | 29238072 | 29237998 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29237445 | 29237477 | 29237445 | ID=MS.gene49570.t1.exon9;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29237445 | 29237477 | 29237445 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29237201 | 29237278 | 29237201 | ID=MS.gene49570.t1.exon10;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29237201 | 29237278 | 29237201 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29236570 | 29236641 | 29236570 | ID=MS.gene49570.t1.exon11;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29236570 | 29236641 | 29236570 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29236280 | 29236389 | 29236280 | ID=MS.gene49570.t1.exon12;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29236280 | 29236389 | 29236280 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| chr5.1 | exon | 29236148 | 29236181 | 29236148 | ID=MS.gene49570.t1.exon13;Parent=MS.gene49570.t1 |
| chr5.1 | CDS | 29236148 | 29236181 | 29236148 | ID=cds.MS.gene49570.t1;Parent=MS.gene49570.t1 |
| Gene Sequence |
| Protein sequence |
