AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50985

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50985.t1 MTR_3g040370 98.350 606 10 0 1 606 1 606 0.0 1257
MS.gene50985.t1 MTR_8g055840 71.757 609 166 4 3 606 2 609 0.0 944
MS.gene50985.t1 MTR_5g040360 72.896 594 157 3 17 606 15 608 0.0 942
MS.gene50985.t1 MTR_4g098890 63.695 617 206 7 1 606 1 610 0.0 832
MS.gene50985.t1 MTR_8g100075 53.018 613 255 7 19 606 25 629 0.0 669
MS.gene50985.t1 MTR_7g076170 52.217 609 259 6 19 599 23 627 0.0 659
MS.gene50985.t1 MTR_0019s0120 55.596 554 233 4 62 603 83 635 0.0 652
MS.gene50985.t1 MTR_1g101370 52.033 615 266 8 10 598 7 618 0.0 649
MS.gene50985.t1 MTR_8g432680 51.148 610 265 8 20 599 26 632 0.0 637
MS.gene50985.t1 MTR_7g006060 51.378 508 234 3 78 572 36 543 0.0 550
MS.gene50985.t1 MTR_0019s0120 53.642 453 200 3 62 505 83 534 2.32e-178 516
MS.gene50985.t1 MTR_8g071280 42.571 599 315 10 16 604 16 595 2.52e-162 477
MS.gene50985.t1 MTR_5g026930 43.072 599 309 14 10 597 13 590 2.50e-161 474
MS.gene50985.t1 MTR_7g076150 44.068 531 265 8 83 597 73 587 7.56e-152 450
MS.gene50985.t1 MTR_8g432620 43.346 526 266 9 88 597 91 600 2.62e-149 444
MS.gene50985.t1 MTR_5g080720 41.636 550 292 13 61 594 101 637 2.29e-146 438
MS.gene50985.t1 MTR_3g068990 42.218 559 287 15 55 594 124 665 2.95e-140 423
MS.gene50985.t1 MTR_1g075900 42.754 552 271 15 77 599 81 616 5.79e-138 416
MS.gene50985.t1 MTR_1g442840 39.701 602 315 15 3 572 2 587 7.54e-138 415
MS.gene50985.t1 MTR_1g029730 43.066 548 284 15 66 596 122 658 5.30e-137 414
MS.gene50985.t1 MTR_1g442840 44.561 478 235 11 112 572 10 474 3.82e-134 402
MS.gene50985.t1 MTR_1g069785 40.070 574 301 17 59 606 38 594 9.61e-133 401
MS.gene50985.t1 MTR_7g076150 44.444 459 223 8 155 597 2 444 2.85e-131 392
MS.gene50985.t1 MTR_5g026930 42.209 507 262 13 10 505 13 499 1.16e-129 390
MS.gene50985.t1 MTR_3g096480 41.948 534 269 16 94 604 268 783 3.28e-128 395
MS.gene50985.t1 MTR_5g083150 39.652 517 276 12 93 591 100 598 5.91e-127 387
MS.gene50985.t1 MTR_5g080720 41.856 485 253 13 61 529 101 572 1.56e-126 384
MS.gene50985.t1 MTR_8g093880 41.292 511 263 13 94 581 298 794 1.89e-123 384
MS.gene50985.t1 MTR_8g076650 40.288 556 279 18 65 588 353 887 1.71e-122 384
MS.gene50985.t1 MTR_1g051055 38.941 529 290 9 88 597 89 603 1.37e-121 373
MS.gene50985.t1 MTR_5g021100 40.426 517 271 14 94 588 329 830 2.88e-121 379
MS.gene50985.t1 MTR_3g071530 38.826 528 288 15 62 574 124 631 3.00e-120 370
MS.gene50985.t1 MTR_3g088790 40.072 559 291 18 65 597 202 742 2.12e-118 369
MS.gene50985.t1 MTR_1g022255 34.924 524 288 18 94 597 209 699 6.94e-89 290
MS.gene50985.t1 MTR_4g083030 32.500 520 319 12 83 582 84 591 1.55e-88 286
MS.gene50985.t1 MTR_3g074780 30.033 606 359 18 14 580 94 673 1.64e-84 278
MS.gene50985.t1 MTR_5g064080 31.295 556 312 18 83 597 144 670 2.37e-83 275
MS.gene50985.t1 MTR_1g022255 30.256 390 225 15 94 464 209 570 4.93e-43 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50985.t1 AT1G26850 69.805 616 173 5 1 604 1 615 0.0 916
MS.gene50985.t1 AT1G26850 69.805 616 173 5 1 604 1 615 0.0 916
MS.gene50985.t1 AT4G18030 64.157 611 207 5 1 602 1 608 0.0 836
MS.gene50985.t1 AT1G26850 68.452 504 146 5 1 492 1 503 0.0 733
MS.gene50985.t1 AT4G10440 53.048 607 249 6 19 599 22 618 0.0 674
MS.gene50985.t1 AT1G33170 55.717 551 229 3 61 599 89 636 0.0 662
MS.gene50985.t1 AT2G45750 51.495 602 266 7 19 598 19 616 0.0 637
MS.gene50985.t1 AT4G00750 50.820 610 275 5 19 606 25 631 0.0 636
MS.gene50985.t1 AT2G43200 50.888 507 239 4 85 582 91 596 0.0 531
MS.gene50985.t1 AT2G43200 50.888 507 239 4 85 582 91 596 0.0 531
MS.gene50985.t1 AT1G31850 41.973 598 316 12 21 604 23 603 2.18e-168 493
MS.gene50985.t1 AT1G31850 41.973 598 316 12 21 604 23 603 2.18e-168 493
MS.gene50985.t1 AT1G31850 41.973 598 316 12 21 604 23 603 2.18e-168 493
MS.gene50985.t1 AT1G31850 41.973 598 316 12 21 604 23 603 2.18e-168 493
MS.gene50985.t1 AT4G19120 41.556 604 308 13 21 606 23 599 1.36e-164 483
MS.gene50985.t1 AT4G19120 41.556 604 308 13 21 606 23 599 1.36e-164 483
MS.gene50985.t1 AT4G00740 41.626 615 319 11 7 603 7 599 1.04e-155 460
MS.gene50985.t1 AT4G00740 41.626 615 319 11 7 603 7 599 1.04e-155 460
MS.gene50985.t1 AT2G39750 42.533 529 279 11 81 595 173 690 2.60e-142 429
MS.gene50985.t1 AT5G06050 41.455 550 290 14 64 596 129 663 8.55e-141 425
MS.gene50985.t1 AT1G04430 41.451 579 290 14 61 606 60 622 1.34e-139 420
MS.gene50985.t1 AT1G04430 41.451 579 290 14 61 606 60 622 1.34e-139 420
MS.gene50985.t1 AT1G04430 41.451 579 290 14 61 606 60 622 1.34e-139 420
MS.gene50985.t1 AT1G77260 42.991 535 274 15 77 595 135 654 1.38e-139 421
MS.gene50985.t1 AT4G14360 43.160 519 257 13 78 572 67 571 2.51e-135 408
MS.gene50985.t1 AT4G14360 43.160 519 257 13 78 572 67 571 2.51e-135 408
MS.gene50985.t1 AT3G23300 41.865 547 274 16 83 602 77 606 9.79e-135 407
MS.gene50985.t1 AT3G23300 41.865 547 274 16 83 602 77 606 9.79e-135 407
MS.gene50985.t1 AT4G19120 41.948 503 248 12 21 505 23 499 7.05e-133 398
MS.gene50985.t1 AT1G29470 41.667 528 264 16 94 597 250 757 9.50e-129 396
MS.gene50985.t1 AT1G29470 41.667 528 264 16 94 597 250 757 9.50e-129 396
MS.gene50985.t1 AT3G56080 41.732 508 263 15 84 576 106 595 1.98e-128 390
MS.gene50985.t1 AT2G34300 41.098 528 267 15 94 597 250 757 1.92e-126 390
MS.gene50985.t1 AT2G34300 41.098 528 267 15 94 597 250 757 1.92e-126 390
MS.gene50985.t1 AT2G34300 41.098 528 267 15 94 597 250 757 1.92e-126 390
MS.gene50985.t1 AT5G04060 39.360 531 282 12 88 597 86 597 5.68e-126 384
MS.gene50985.t1 AT3G10200 39.212 533 282 13 88 597 75 588 3.82e-125 381
MS.gene50985.t1 AT5G64030 40.494 526 274 15 94 597 308 816 1.31e-121 379
MS.gene50985.t1 AT5G14430 40.370 540 274 15 88 597 83 604 9.45e-120 368
MS.gene50985.t1 AT2G40280 39.216 510 276 12 93 588 89 578 1.60e-119 367
MS.gene50985.t1 AT5G14430 40.000 540 276 15 88 597 83 604 4.57e-118 364
MS.gene50985.t1 AT3G51070 40.824 534 263 20 93 597 380 889 9.23e-118 371
MS.gene50985.t1 AT3G10200 38.856 507 267 13 88 570 75 562 4.27e-115 356
MS.gene50985.t1 AT3G56080 42.576 458 230 15 84 526 106 545 9.02e-115 353
MS.gene50985.t1 AT3G51070 42.516 461 220 18 93 526 380 822 6.87e-102 328
MS.gene50985.t1 AT1G13860 32.895 532 309 12 80 582 76 588 3.68e-93 299
MS.gene50985.t1 AT1G13860 32.895 532 309 12 80 582 76 588 3.68e-93 299
MS.gene50985.t1 AT1G13860 32.895 532 309 12 80 582 76 588 3.68e-93 299
MS.gene50985.t1 AT1G13860 32.895 532 309 12 80 582 76 588 3.68e-93 299
MS.gene50985.t1 AT1G19430 34.749 518 292 17 94 591 231 722 7.33e-88 288
MS.gene50985.t1 AT1G19430 34.749 518 292 17 94 591 231 722 7.33e-88 288
MS.gene50985.t1 AT2G03480 32.453 530 297 12 82 582 83 580 3.07e-86 280
MS.gene50985.t1 AT2G03480 33.012 518 321 11 82 582 83 591 8.04e-86 280
MS.gene50985.t1 AT1G13860 35.011 437 250 10 172 582 4 432 5.39e-83 267
MS.gene50985.t1 AT1G78240 30.033 606 358 19 14 580 86 664 1.43e-80 268
MS.gene50985.t1 AT1G78240 30.033 606 358 19 14 580 86 664 1.43e-80 268
MS.gene50985.t1 AT1G19430 30.633 395 232 14 94 471 231 600 3.92e-45 169
MS.gene50985.t1 AT2G03480 30.420 286 185 3 82 358 83 363 1.47e-42 159

Find 166 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACATTCATAACCCATAATT+TGG 0.133173 3.2:-28861399 None:intergenic
CCCTGGATTCTCCCAAATTA+TGG 0.203218 3.2:+28861387 MS.gene50985:CDS
GGTGGTTACTGGATACTTTC+TGG 0.206385 3.2:+28860220 MS.gene50985:CDS
ATCCTCATGATCCACCATTT+TGG 0.239247 3.2:-28863710 None:intergenic
CCTGCAATCATTGGTGTTCT+TGG 0.240795 3.2:+28859861 MS.gene50985:CDS
TGTGGTTTCTTCTACATATT+AGG 0.244248 3.2:+28858598 MS.gene50985:CDS
CAATGCAATTTCTCTTCTTC+AGG 0.249924 3.2:-28858883 None:intergenic
TTCTTAGACCTGGTGGTTAC+TGG 0.278416 3.2:+28860209 MS.gene50985:CDS
TTGAGGAGGACAACCGATTA+TGG 0.292931 3.2:+28861261 MS.gene50985:CDS
GTGTTATTCCATTGGATAAT+GGG 0.310194 3.2:+28859115 MS.gene50985:CDS
TGTATGCCGTCAAGCGGTAC+TGG 0.313995 3.2:+28863758 MS.gene50985:CDS
ATGGACATGAATGCTGGTTT+TGG 0.317218 3.2:+28861350 MS.gene50985:CDS
AACAGATCCACTGGTGATTC+TGG 0.320240 3.2:-28861216 None:intergenic
CCTGGATTCTCCCAAATTAT+GGG 0.335830 3.2:+28861388 MS.gene50985:CDS
TCACATGTTTCTTCCATAAT+CGG 0.339896 3.2:-28861274 None:intergenic
TTGTGGCAAAGGAGTGGTTT+TGG 0.341553 3.2:+28858622 MS.gene50985:CDS
CGGAATATAACCGCTCCTTC+AGG 0.347841 3.2:-28863628 None:intergenic
GTTCTCGCTGCTTGATTCCA+TGG 0.353569 3.2:+28859931 MS.gene50985:CDS
AGCACAAGTTCAATTTGCTT+TGG 0.358150 3.2:+28859827 MS.gene50985:CDS
GTCAAGCGGTACTGGGTTGC+AGG 0.358325 3.2:+28863766 MS.gene50985:CDS
TGATTGGAATTTATCATGAT+TGG 0.360133 3.2:+28861474 MS.gene50985:CDS
TTCTCGCTGCTTGATTCCAT+GGG 0.364909 3.2:+28859932 MS.gene50985:CDS
TTGAGAAGGCTGTGCAGAAT+TGG 0.369767 3.2:+28859004 MS.gene50985:CDS
ATATTCGAGCGTGGATTGAT+TGG 0.372018 3.2:+28861458 MS.gene50985:CDS
ATAATGCCAGGTTGCTAGTT+GGG 0.373268 3.2:+28859743 MS.gene50985:intron
ACACTGCTAAACTTCTTTGC+TGG 0.373706 3.2:+28860326 MS.gene50985:CDS
TTATTGTTTCTATTATCTCC+AGG 0.375991 3.2:-28858541 None:intergenic
TGCTCTCGCTTGATCATGGC+AGG 0.376794 3.2:-28858812 None:intergenic
TAGTTGTTCTTCCAGTTGAT+TGG 0.377835 3.2:-28860247 None:intergenic
ATTAGAACTGCATTAGATAC+TGG 0.385129 3.2:+28859141 MS.gene50985:CDS
AGTGTTATTCCATTGGATAA+TGG 0.391930 3.2:+28859114 MS.gene50985:CDS
GTAGCTTTCTCAGCAATTGT+AGG 0.406813 3.2:-28861425 None:intergenic
TGGTGCATGGAAGCCATTCC+CGG 0.408977 3.2:+28861172 MS.gene50985:CDS
TGGTGGAACTCAGTTTCCTC+AGG 0.413607 3.2:+28859062 MS.gene50985:CDS
GGCACATAATCACGACTCTT+AGG 0.417529 3.2:-28858949 None:intergenic
TCTTCTACATATTAGGTTTG+TGG 0.418853 3.2:+28858605 MS.gene50985:CDS
AATGAGATGGAATACCAAAA+TGG 0.420900 3.2:+28863696 MS.gene50985:CDS
ACATTCATAACCCATAATTT+GGG 0.421771 3.2:-28861398 None:intergenic
GTTCAATTTGCTTTGGAAAG+AGG 0.431401 3.2:+28859834 MS.gene50985:CDS
AGCGGTTATATTCCGAGATC+AGG 0.434664 3.2:+28863636 MS.gene50985:CDS
TCCTCCTCAAGCTCATCTTC+AGG 0.435903 3.2:-28860286 None:intergenic
ACATATTAGGTTTGTGGCAA+AGG 0.442396 3.2:+28858611 MS.gene50985:CDS
GATATTCTACGCCGTTTCCT+TGG 0.442639 3.2:+28858926 MS.gene50985:CDS
CAGCAAATTCCGATGATGTC+TGG 0.447884 3.2:+28860446 MS.gene50985:CDS
TTTGCTGATTCACATATTGT+AGG 0.450073 3.2:-28860430 None:intergenic
ACTTGCAAGTGTTATTCCAT+TGG 0.452305 3.2:+28859107 MS.gene50985:CDS
TTTCTGGTCCTCCAATCAAC+TGG 0.454130 3.2:+28860236 MS.gene50985:CDS
TGGTCCACTTATTTCAGAAA+AGG 0.457651 3.2:+28863732 MS.gene50985:CDS
AAACACCATTTGCATGGATA+AGG 0.463004 3.2:-28863215 None:intergenic
CACTGCTAAACTTCTTTGCT+GGG 0.463203 3.2:+28860327 MS.gene50985:CDS
CATGCACCACTAGGTTTAGC+AGG 0.463854 3.2:-28861158 None:intergenic
CCAAGAACACCAATGATTGC+AGG 0.464040 3.2:-28859861 None:intergenic
TGCAACCCAGTACCGCTTGA+CGG 0.468786 3.2:-28863764 None:intergenic
TTGTTCTTCCAGTTGATTGG+AGG 0.469936 3.2:-28860244 None:intergenic
GGAGATAATAGAAACAATAA+AGG 0.473411 3.2:+28858544 MS.gene50985:CDS
TATTGTTTCTATTATCTCCA+GGG 0.478348 3.2:-28858540 None:intergenic
ACTTGATCATCCACATCATC+AGG 0.478380 3.2:-28858745 None:intergenic
GGAACAACATTGAGTCTCTC+CGG 0.478828 3.2:-28861191 None:intergenic
TTCTCACCGTTTGCACCCCA+TGG 0.485211 3.2:-28859948 None:intergenic
AGAGGTGTTCCTGCAATCAT+TGG 0.490042 3.2:+28859852 MS.gene50985:CDS
CTCCTTCAGGCCGTAAGATA+CGG 0.496365 3.2:-28863615 None:intergenic
ACTGCATTAGATACTGGTTG+TGG 0.496504 3.2:+28859147 MS.gene50985:CDS
AACGGCGTAGAATATCCTTT+AGG 0.497535 3.2:-28858919 None:intergenic
TTCATAATCATGGCGACGAA+AGG 0.498979 3.2:+28858514 None:intergenic
CCCATAATTTGGGAGAATCC+AGG 0.500245 3.2:-28861388 None:intergenic
TGGAGATGGACCGTATCTTA+CGG 0.502790 3.2:+28863605 MS.gene50985:CDS
CGCTGGAACGCCTGATGATG+TGG 0.503863 3.2:+28858735 MS.gene50985:CDS
GTATGCCGTCAAGCGGTACT+GGG 0.506500 3.2:+28863759 MS.gene50985:CDS
TCATTGCTCTCGCTTGATCA+TGG 0.507222 3.2:-28858816 None:intergenic
GATAATGCCAGGTTGCTAGT+TGG 0.509409 3.2:+28859742 MS.gene50985:intron
TATGACCTTATCCATGCAAA+TGG 0.511685 3.2:+28863210 MS.gene50985:CDS
GTTAACAAAATTATTGACTC+GGG 0.511760 3.2:+28861311 MS.gene50985:CDS
AGAATATGAATTATAGAGAA+AGG 0.514276 3.2:+28858851 MS.gene50985:CDS
ATGAGCTTGAGGAGGAGCAA+AGG 0.515379 3.2:+28860293 MS.gene50985:CDS
GTCATAAGTCCTCGGATATG+TGG 0.517032 3.2:-28863193 None:intergenic
TGCAATGTCAATTGCACCAA+GGG 0.517748 3.2:+28859794 MS.gene50985:CDS
TGTCTCATAGCCGCACCTAA+AGG 0.517939 3.2:+28858904 MS.gene50985:CDS
TGTATCCACACAGTTATTTG+AGG 0.522368 3.2:+28861244 MS.gene50985:CDS
TTGTAAGGCGCATTTGCAAA+CGG 0.522787 3.2:-28858970 None:intergenic
AGAAAGGTGAAATTGCGATC+TGG 0.523535 3.2:+28860362 MS.gene50985:CDS
CAGAATTGGATACAGTATGA+AGG 0.524032 3.2:+28859018 MS.gene50985:CDS
CTTCAGGACGTTGCCACGCT+CGG 0.524545 3.2:-28860270 None:intergenic
TCATAATCATGGCGACGAAA+GGG 0.524702 3.2:+28858515 None:intergenic
TCAAAAGCTCCAGAAGGAAA+AGG 0.525704 3.2:-28859897 None:intergenic
TGCAATTTCTCTTCTTCAGG+AGG 0.530109 3.2:-28858880 None:intergenic
CTGCATTAGATACTGGTTGT+GGG 0.535379 3.2:+28859148 MS.gene50985:CDS
TGTGCTTCATGAGAGTCCCT+TGG 0.536377 3.2:-28859810 None:intergenic
TTCATTGTAGTTGCTTTGTG+TGG 0.537719 3.2:+28858580 MS.gene50985:CDS
CCATAATTTGGGAGAATCCA+GGG 0.540312 3.2:-28861387 None:intergenic
GGTTAACAAAATTATTGACT+CGG 0.540607 3.2:+28861310 MS.gene50985:CDS
ACATTGAGTCTCTCCGGGAA+TGG 0.540912 3.2:-28861185 None:intergenic
AACTTACGCATTCTTGTACA+AGG 0.541342 3.2:-28863241 None:intergenic
CTCAGGTGGATTGTACATGA+AGG 0.541515 3.2:+28860174 MS.gene50985:intron
AATGTCTAGGTACAAGAAGA+TGG 0.544409 3.2:+28861121 MS.gene50985:intron
GCGTTCCAGCGTCATTATCA+TGG 0.545955 3.2:-28858723 None:intergenic
CAAGTGAAAAGAATTGCAAA+AGG 0.546432 3.2:+28863673 MS.gene50985:CDS
TAATGCCAGGTTGCTAGTTG+GGG 0.546828 3.2:+28859744 MS.gene50985:intron
TCAACCGTCAGACTCTTGTA+AGG 0.547001 3.2:-28858985 None:intergenic
TCAGCACACCAACCTGATCT+CGG 0.548579 3.2:-28863648 None:intergenic
CTGCTAAACCTAGTGGTGCA+TGG 0.551940 3.2:+28861159 MS.gene50985:CDS
CAAGAGTCTGACGGTTGAGA+AGG 0.552915 3.2:+28858990 MS.gene50985:CDS
GGAAACTGAGTTCCACCACC+AGG 0.554496 3.2:-28859057 None:intergenic
AGGTGAAAACACCATTTGCA+TGG 0.559659 3.2:-28863221 None:intergenic
AATGGCTTCCATGCACCACT+AGG 0.565263 3.2:-28861167 None:intergenic
GAACAACATTGAGTCTCTCC+GGG 0.571537 3.2:-28861190 None:intergenic
TGGGAAAAGAAACACGAGAA+AGG 0.572348 3.2:+28860346 MS.gene50985:CDS
CGACTCTTAGGCCAAGGAAA+CGG 0.575028 3.2:-28858937 None:intergenic
GGTGGAACTCAGTTTCCTCA+GGG 0.575524 3.2:+28859063 MS.gene50985:CDS
GACCGTATCTTACGGCCTGA+AGG 0.579040 3.2:+28863613 MS.gene50985:CDS
TTGATTCCATGGGGTGCAAA+CGG 0.580051 3.2:+28859942 MS.gene50985:CDS
CTATAATTCATATTCTCTCG+CGG 0.583956 3.2:-28858844 None:intergenic
TACCAAAATGGTGGATCATG+AGG 0.586574 3.2:+28863708 MS.gene50985:CDS
TATCTTACGGCCTGAAGGAG+CGG 0.591500 3.2:+28863618 MS.gene50985:CDS
GGGGAGGTATCGCAATGTGA+TGG 0.591837 3.2:+28861331 MS.gene50985:CDS
AACCACCAGGTCTAAGAACT+CGG 0.593120 3.2:-28860204 None:intergenic
GTTATATTCCGAGATCAGGT+TGG 0.595480 3.2:+28863640 MS.gene50985:CDS
TACATGAGGAACAGATCCAC+TGG 0.596376 3.2:-28861225 None:intergenic
CACGCTCGAATATAACGCCA+AGG 0.600165 3.2:-28861448 None:intergenic
ATTGCTGAGAAAGCTACCCT+TGG 0.600623 3.2:+28861431 MS.gene50985:CDS
AGAATTGGATACAGTATGAA+GGG 0.603120 3.2:+28859019 MS.gene50985:CDS
GTTGACCGAGTTCTTAGACC+TGG 0.606390 3.2:+28860199 MS.gene50985:CDS
CTGAAATCACTATGAGCTTG+TGG 0.608795 3.2:-28863797 None:intergenic
TGGATAAGGTCATAAGTCCT+CGG 0.608994 3.2:-28863201 None:intergenic
ACTACAATGAAAATTGACAC+TGG 0.609222 3.2:-28858568 None:intergenic
ACATGTGAATGCTTACAAGC+GGG 0.609421 3.2:+28861289 MS.gene50985:CDS
TAATCACGACTCTTAGGCCA+AGG 0.609435 3.2:-28858943 None:intergenic
TTAGGTTTGTGGCAAAGGAG+TGG 0.613237 3.2:+28858616 MS.gene50985:CDS
GAGATGGAATACCAAAATGG+TGG 0.616902 3.2:+28863699 MS.gene50985:CDS
TGCATTAGATACTGGTTGTG+GGG 0.616968 3.2:+28859149 MS.gene50985:CDS
ATCCACACAGTTATTTGAGG+AGG 0.617680 3.2:+28861247 MS.gene50985:CDS
AGTCCTCGGATATGTGGAGA+AGG 0.621414 3.2:-28863187 None:intergenic
AAGCAATTACCAGACATCAT+CGG 0.621464 3.2:-28860455 None:intergenic
GATCCACTGGTGATTCTGGT+AGG 0.622673 3.2:-28861212 None:intergenic
AATGTGATGGACATGAATGC+TGG 0.624533 3.2:+28861344 MS.gene50985:CDS
GACCGAGTTCTTAGACCTGG+TGG 0.625195 3.2:+28860202 MS.gene50985:CDS
GGAAGAACAACTACCGAGCG+TGG 0.625378 3.2:+28860257 MS.gene50985:CDS
ACAAAATTATTGACTCGGGG+AGG 0.625557 3.2:+28861315 MS.gene50985:CDS
AACATGTGAATGCTTACAAG+CGG 0.626082 3.2:+28861288 MS.gene50985:CDS
CTAATCATCCCATTATCCAA+TGG 0.627524 3.2:-28859123 None:intergenic
ACTCACCATGATAATGACGC+TGG 0.628103 3.2:+28858718 MS.gene50985:CDS
TCCTGAAGATGAGCTTGAGG+AGG 0.630377 3.2:+28860285 MS.gene50985:CDS
AAAATGGTGGATCATGAGGA+TGG 0.632536 3.2:+28863712 MS.gene50985:CDS
GCTCTCGCTTGATCATGGCA+GGG 0.633453 3.2:-28858811 None:intergenic
ATGGCGACGAAAGGGAACCC+TGG 0.633656 3.2:+28858523 MS.gene50985:CDS
GAATTGCAAAAGGAATGAGA+TGG 0.639259 3.2:+28863683 MS.gene50985:CDS
TTAACAAAATTATTGACTCG+GGG 0.644245 3.2:+28861312 MS.gene50985:CDS
CTTGGCGTTATATTCGAGCG+TGG 0.650173 3.2:+28861449 MS.gene50985:CDS
GCATTAAACATTGATGAATG+CGG 0.650787 3.2:+28860391 MS.gene50985:CDS
GAAAGTATCCAGTAACCACC+AGG 0.652413 3.2:-28860217 None:intergenic
AATAACTGTGTGGATACATG+AGG 0.659395 3.2:-28861239 None:intergenic
AGGTCTTGTATGCCGTCAAG+CGG 0.663670 3.2:+28863752 MS.gene50985:CDS
GCCATGTCAAAAGCTCCAGA+AGG 0.665789 3.2:-28859903 None:intergenic
ACGTCCTGAAGATGAGCTTG+AGG 0.668730 3.2:+28860282 MS.gene50985:CDS
TCGATGTAGCTATCGTCACA+AGG 0.669385 3.2:-28858781 None:intergenic
TTGCAATGTCAATTGCACCA+AGG 0.673230 3.2:+28859793 MS.gene50985:CDS
AAGCCTTCTCCACATATCCG+AGG 0.678585 3.2:+28863184 MS.gene50985:CDS
GTCCTCCTCAAATAACTGTG+TGG 0.682256 3.2:-28861249 None:intergenic
TCTCGCTGCTTGATTCCATG+GGG 0.683640 3.2:+28859933 MS.gene50985:CDS
GTAACTCCTGCTAAACCTAG+TGG 0.692700 3.2:+28861152 MS.gene50985:CDS
GAAACTGAGTTCCACCACCA+GGG 0.695348 3.2:-28859056 None:intergenic
TGCGCCTTACAAGAGTCTGA+CGG 0.697082 3.2:+28858981 MS.gene50985:CDS
TGATGTGGATGATCAAGTCA+AGG 0.697083 3.2:+28858750 MS.gene50985:CDS
GTTCCTACCAGAATCACCAG+TGG 0.702298 3.2:+28861209 MS.gene50985:CDS
CGTAGAATATCCTTTAGGTG+CGG 0.702529 3.2:-28858914 None:intergenic
ACGCTCGAATATAACGCCAA+GGG 0.703437 3.2:-28861447 None:intergenic
ATGTAAGCATCAGCACCCTG+AGG 0.736890 3.2:-28859078 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTATTTATATATAAACA+AGG - chr3.2:28859201-28859220 None:intergenic 10.0%
!! ATATAAATAAACTATTTAGT+TGG + chr3.2:28859208-28859227 MS.gene50985:intron 10.0%
!! AATGCATATAGAATAAAAAT+CGG - chr3.2:28860754-28860773 None:intergenic 15.0%
!! ATTAATTAATAAACAGAACA+AGG - chr3.2:28863141-28863160 None:intergenic 15.0%
!! GATTATTAAACCATAATAAT+TGG + chr3.2:28860142-28860161 MS.gene50985:intron 15.0%
!! TTGATTGAAATATAATCTAT+TGG + chr3.2:28859996-28860015 MS.gene50985:intron 15.0%
!!! TTTTTAATCTGAATTTAGTA+TGG + chr3.2:28863032-28863051 MS.gene50985:intron 15.0%
!! AAGCAAAAGAAAAAAAGAAA+AGG - chr3.2:28860496-28860515 None:intergenic 20.0%
!! AGAATATGAATTATAGAGAA+AGG + chr3.2:28858851-28858870 MS.gene50985:CDS 20.0%
!! AGCAAAAGAAAAAAAGAAAA+GGG - chr3.2:28860495-28860514 None:intergenic 20.0%
!! AGTGTAAATATTATAGCATT+TGG + chr3.2:28861804-28861823 MS.gene50985:intron 20.0%
!! GAAAAAAGTTCCAATTATTA+TGG - chr3.2:28860155-28860174 None:intergenic 20.0%
!! GATTATATTTCAATCAACAT+TGG - chr3.2:28859993-28860012 None:intergenic 20.0%
!! TATATATAAACAAGGATGTT+AGG - chr3.2:28859193-28859212 None:intergenic 20.0%
!! TTACTTATTTGCTTGTAAAA+TGG + chr3.2:28860783-28860802 MS.gene50985:intron 20.0%
!! TTGACATCCTAATTTATAAA+TGG - chr3.2:28861741-28861760 None:intergenic 20.0%
!!! AATTTTATTAGTCATTGAGT+TGG + chr3.2:28861545-28861564 MS.gene50985:intron 20.0%
!!! AGAATACTTATGAGTTTTTT+TGG + chr3.2:28859967-28859986 MS.gene50985:intron 20.0%
!!! CCTAATTTATAAATGGATTA+GGG - chr3.2:28861734-28861753 None:intergenic 20.0%
!!! GATTTATTCAGAATTTTGAA+TGG + chr3.2:28861877-28861896 MS.gene50985:intron 20.0%
!!! TAATGCAGAAGATATTTTAT+TGG + chr3.2:28863585-28863604 MS.gene50985:CDS 20.0%
!!! TCCTAATTTATAAATGGATT+AGG - chr3.2:28861735-28861754 None:intergenic 20.0%
!!! TGTTTTTCTTTTCAAAAACA+GGG - chr3.2:28860653-28860672 None:intergenic 20.0%
!!! TTTTTGAAAAGAAAAACAGA+TGG + chr3.2:28860655-28860674 MS.gene50985:intron 20.0%
!!! TTTTTTGTTGACGTTATATA+TGG + chr3.2:28861922-28861941 MS.gene50985:intron 20.0%
! AAAAGAAAAAAAGAAAAGGG+GGG - chr3.2:28860492-28860511 None:intergenic 25.0%
! AAACTCAAGCATAATGAATT+TGG + chr3.2:28862121-28862140 MS.gene50985:intron 25.0%
! AACTCAAGCATAATGAATTT+GGG + chr3.2:28862122-28862141 MS.gene50985:intron 25.0%
! AAGAAAAGTAACAATGAAGT+AGG + chr3.2:28861843-28861862 MS.gene50985:intron 25.0%
! AATGTTAAGTAAGCAATAGA+TGG + chr3.2:28863056-28863075 MS.gene50985:intron 25.0%
! ACATTCATAACCCATAATTT+GGG - chr3.2:28861401-28861420 None:intergenic 25.0%
! AGTATATGAATCCAATTCTT+AGG - chr3.2:28860111-28860130 None:intergenic 25.0%
! ATGACTAATAAAATTCACAG+AGG - chr3.2:28861540-28861559 None:intergenic 25.0%
! CAAAAGAAAAAAAGAAAAGG+GGG - chr3.2:28860493-28860512 None:intergenic 25.0%
! CCAGAAACAAAAAAACAAAT+TGG + chr3.2:28863308-28863327 MS.gene50985:intron 25.0%
! CCCTAATCCATTTATAAATT+AGG + chr3.2:28861731-28861750 MS.gene50985:intron 25.0%
! CCTTACTAAATAATGTATCA+CGG + chr3.2:28859262-28859281 MS.gene50985:intron 25.0%
! CGTGATACATTATTTAGTAA+GGG - chr3.2:28859264-28859283 None:intergenic 25.0%
! GCAAAAGAAAAAAAGAAAAG+GGG - chr3.2:28860494-28860513 None:intergenic 25.0%
! GGAGATAATAGAAACAATAA+AGG + chr3.2:28858544-28858563 MS.gene50985:CDS 25.0%
! GGGAACTTAATGATTAAAAA+AGG + chr3.2:28862562-28862581 MS.gene50985:intron 25.0%
! TAATTATCTATTTCCGTATC+AGG + chr3.2:28863157-28863176 MS.gene50985:intron 25.0%
! TATTTAACGACATTGTTTGT+TGG + chr3.2:28859327-28859346 MS.gene50985:intron 25.0%
! TGATTGGAATTTATCATGAT+TGG + chr3.2:28861474-28861493 MS.gene50985:CDS 25.0%
! TGTCAACATTAAGATTATAC+TGG + chr3.2:28861755-28861774 MS.gene50985:intron 25.0%
! TTCAGATTAAAAATTTCTGC+AGG - chr3.2:28863025-28863044 None:intergenic 25.0%
!! AGAAGATATTTTATTGGAGA+TGG + chr3.2:28863591-28863610 MS.gene50985:CDS 25.0%
!! AGTATTGAAAACAAAACCAA+TGG - chr3.2:28861084-28861103 None:intergenic 25.0%
!! AGTCTAAGATACATATCATT+TGG + chr3.2:28862092-28862111 MS.gene50985:intron 25.0%
!! CTTAAGAAACATGTTTTCTT+AGG + chr3.2:28860827-28860846 MS.gene50985:intron 25.0%
!! GAATCTGGTTTAAGAATAAT+AGG - chr3.2:28860558-28860577 None:intergenic 25.0%
!! GGTTAACAAAATTATTGACT+CGG + chr3.2:28861310-28861329 MS.gene50985:CDS 25.0%
!! GTAAAAGAGAAAATTTTGCA+TGG - chr3.2:28859627-28859646 None:intergenic 25.0%
!! GTTTTCAATACTCATCTAAA+TGG + chr3.2:28861092-28861111 MS.gene50985:intron 25.0%
!!! ATAATTGGAACTTTTTTCTC+AGG + chr3.2:28860157-28860176 MS.gene50985:intron 25.0%
!!! CCAATTTGTTTTTTTGTTTC+TGG - chr3.2:28863311-28863330 None:intergenic 25.0%
!!! CTGTTTTTCTTTTCAAAAAC+AGG - chr3.2:28860654-28860673 None:intergenic 25.0%
!!! GTTAACAAAATTATTGACTC+GGG + chr3.2:28861311-28861330 MS.gene50985:CDS 25.0%
!!! TATCTGATATGTTGTTGTTT+TGG - chr3.2:28862440-28862459 None:intergenic 25.0%
!!! TATTGTTTCTATTATCTCCA+GGG - chr3.2:28858543-28858562 None:intergenic 25.0%
!!! TTAACAAAATTATTGACTCG+GGG + chr3.2:28861312-28861331 MS.gene50985:CDS 25.0%
!!! TTATTGTTTCTATTATCTCC+AGG - chr3.2:28858544-28858563 None:intergenic 25.0%
!!! TTTGGTTCTTTATAGATTCA+GGG - chr3.2:28861593-28861612 None:intergenic 25.0%
AAACACATCAAACCTAAATG+CGG + chr3.2:28862494-28862513 MS.gene50985:intron 30.0%
AATGAGATGGAATACCAAAA+TGG + chr3.2:28863696-28863715 MS.gene50985:CDS 30.0%
ACTACAATGAAAATTGACAC+TGG - chr3.2:28858571-28858590 None:intergenic 30.0%
AGAATTGGATACAGTATGAA+GGG + chr3.2:28859019-28859038 MS.gene50985:CDS 30.0%
ATCTTAGACTAATTCAGAAG+AGG - chr3.2:28862082-28862101 None:intergenic 30.0%
ATTAGAACTGCATTAGATAC+TGG + chr3.2:28859141-28859160 MS.gene50985:CDS 30.0%
CAAGTGAAAAGAATTGCAAA+AGG + chr3.2:28863673-28863692 MS.gene50985:CDS 30.0%
CCGTGATACATTATTTAGTA+AGG - chr3.2:28859265-28859284 None:intergenic 30.0%
CGTTTAATGCAAACTACTTT+AGG + chr3.2:28863528-28863547 MS.gene50985:intron 30.0%
CTATAATTCATATTCTCTCG+CGG - chr3.2:28858847-28858866 None:intergenic 30.0%
GAATCACTTAAATCTGAACA+AGG - chr3.2:28862624-28862643 None:intergenic 30.0%
GACATTCATAACCCATAATT+TGG - chr3.2:28861402-28861421 None:intergenic 30.0%
GATCTGCTGAAATATGTAAT+AGG + chr3.2:28862925-28862944 MS.gene50985:intron 30.0%
GCATTAAACATTGATGAATG+CGG + chr3.2:28860391-28860410 MS.gene50985:CDS 30.0%
GTGAAAAAACTTTCTTGAAG+TGG - chr3.2:28861656-28861675 None:intergenic 30.0%
GTTGACGTTATATATGGATT+CGG + chr3.2:28861928-28861947 MS.gene50985:intron 30.0%
TAAATGGTTAGACAATGTCT+AGG + chr3.2:28861108-28861127 MS.gene50985:intron 30.0%
TCACATGTTTCTTCCATAAT+CGG - chr3.2:28861277-28861296 None:intergenic 30.0%
TCTCAAATCATTATCTGTGT+TGG + chr3.2:28859514-28859533 MS.gene50985:intron 30.0%
TCTTCTACATATTAGGTTTG+TGG + chr3.2:28858605-28858624 MS.gene50985:CDS 30.0%
TGCTTATCAAAATATGCAAC+CGG - chr3.2:28862218-28862237 None:intergenic 30.0%
TGTGGTTTCTTCTACATATT+AGG + chr3.2:28858598-28858617 MS.gene50985:CDS 30.0%
TTAAGTGATTCAAGTAGAGA+AGG + chr3.2:28862633-28862652 MS.gene50985:intron 30.0%
TTAATAAACAGAACAAGGCT+AGG - chr3.2:28863136-28863155 None:intergenic 30.0%
TTCACACATTAGTAAAACTG+TGG + chr3.2:28861671-28861690 MS.gene50985:intron 30.0%
TTGAATGTAACAACGCATAT+CGG - chr3.2:28859483-28859502 None:intergenic 30.0%
TTGACGTTATATATGGATTC+GGG + chr3.2:28861929-28861948 MS.gene50985:intron 30.0%
TTGTAAGATACTGATAACCA+TGG - chr3.2:28863374-28863393 None:intergenic 30.0%
! AATGAATTTGGGACTAAAGA+CGG + chr3.2:28862133-28862152 MS.gene50985:intron 30.0%
! ACAATGAAGTAGGAATGTTT+TGG + chr3.2:28861853-28861872 MS.gene50985:intron 30.0%
! ACGGTAGATGTTTTACATAT+TGG + chr3.2:28862827-28862846 MS.gene50985:intron 30.0%
! AGTATGAAGGGAATGTTTTT+AGG + chr3.2:28859031-28859050 MS.gene50985:CDS 30.0%
! AGTGTTATTCCATTGGATAA+TGG + chr3.2:28859114-28859133 MS.gene50985:CDS 30.0%
! ATATCTTTGGTGTGTTTATC+AGG + chr3.2:28862693-28862712 MS.gene50985:intron 30.0%
! ATATGCTTCCTTGTTTGATT+GGG - chr3.2:28862044-28862063 None:intergenic 30.0%
! ATCTCTAGTGTGTATCTTTT+TGG + chr3.2:28863440-28863459 MS.gene50985:intron 30.0%
! ATCTGAACAAGGTATTAAAG+TGG - chr3.2:28862613-28862632 None:intergenic 30.0%
! CAACTATTTTGCATTCATTG+AGG - chr3.2:28862471-28862490 None:intergenic 30.0%
! CTGTAACTGTTCTAAACTTT+GGG + chr3.2:28862541-28862560 MS.gene50985:intron 30.0%
! GTAGTTTGCATTAAACGATT+AGG - chr3.2:28863525-28863544 None:intergenic 30.0%
! GTGTTATTCCATTGGATAAT+GGG + chr3.2:28859115-28859134 MS.gene50985:CDS 30.0%
! TATATGCTTCCTTGTTTGAT+TGG - chr3.2:28862045-28862064 None:intergenic 30.0%
! TATCTTTGGTGTGTTTATCA+GGG + chr3.2:28862694-28862713 MS.gene50985:intron 30.0%
! TATGGAATCGTTTTATAACG+AGG - chr3.2:28860044-28860063 None:intergenic 30.0%
! TCTGTAACTGTTCTAAACTT+TGG + chr3.2:28862540-28862559 MS.gene50985:intron 30.0%
! TGTAACTGTTCTAAACTTTG+GGG + chr3.2:28862542-28862561 MS.gene50985:intron 30.0%
!! GTTTGGTTCTTTATAGATTC+AGG - chr3.2:28861594-28861613 None:intergenic 30.0%
!! TCCGTTTTTCTTTTAACCTT+GGG - chr3.2:28862867-28862886 None:intergenic 30.0%
!! TTTGCTGATTCACATATTGT+AGG - chr3.2:28860433-28860452 None:intergenic 30.0%
!!! AAGACCTTTTCTGAAATAAG+TGG - chr3.2:28863739-28863758 None:intergenic 30.0%
!!! CTTTTTTTCTTTTGCTTCAC+TGG + chr3.2:28860499-28860518 MS.gene50985:intron 30.0%
!!! TGCATATTTTGATAAGCACA+GGG + chr3.2:28862220-28862239 MS.gene50985:intron 30.0%
!!! TTGCATATTTTGATAAGCAC+AGG + chr3.2:28862219-28862238 MS.gene50985:intron 30.0%
AAACACCATTTGCATGGATA+AGG - chr3.2:28863218-28863237 None:intergenic 35.0%
AAAGTAACAGTGGCTTATGT+CGG - chr3.2:28862264-28862283 None:intergenic 35.0%
AACAAGGATGTTAGGTTAGT+AGG - chr3.2:28859185-28859204 None:intergenic 35.0%
AACATGTGAATGCTTACAAG+CGG + chr3.2:28861288-28861307 MS.gene50985:CDS 35.0%
AACTTACGCATTCTTGTACA+AGG - chr3.2:28863244-28863263 None:intergenic 35.0%
AAGCAATTACCAGACATCAT+CGG - chr3.2:28860458-28860477 None:intergenic 35.0%
AATAACCGAACTTGCGAAAT+AGG - chr3.2:28860711-28860730 None:intergenic 35.0%
AATAACTGTGTGGATACATG+AGG - chr3.2:28861242-28861261 None:intergenic 35.0%
AATGTCTAGGTACAAGAAGA+TGG + chr3.2:28861121-28861140 MS.gene50985:intron 35.0%
AATTCTTAGGTGTCTAGAGA+CGG - chr3.2:28860098-28860117 None:intergenic 35.0%
ACACCTTCAATATGAAGTGT+CGG - chr3.2:28860862-28860881 None:intergenic 35.0%
ACATATTAGGTTTGTGGCAA+AGG + chr3.2:28858611-28858630 MS.gene50985:CDS 35.0%
ACTAGAGATTCCTAGCAATT+GGG - chr3.2:28863429-28863448 None:intergenic 35.0%
AGAGCTTATAAGTATTAGCC+AGG - chr3.2:28859405-28859424 None:intergenic 35.0%
ATACTAGCAATGGCTTATGT+TGG - chr3.2:28862307-28862326 None:intergenic 35.0%
CAATGCAATTTCTCTTCTTC+AGG - chr3.2:28858886-28858905 None:intergenic 35.0%
CAGAATTGGATACAGTATGA+AGG + chr3.2:28859018-28859037 MS.gene50985:CDS 35.0%
CAGGGTTAAAAGTGGAAAAT+GGG - chr3.2:28859662-28859681 None:intergenic 35.0%
CCCCAAGGTTAAAAGAAAAA+CGG + chr3.2:28862863-28862882 MS.gene50985:intron 35.0%
CTAATCATCCCATTATCCAA+TGG - chr3.2:28859126-28859145 None:intergenic 35.0%
CTAGTATAAGTCATCACTAC+TGG + chr3.2:28862320-28862339 MS.gene50985:intron 35.0%
GAATTGCAAAAGGAATGAGA+TGG + chr3.2:28863683-28863702 MS.gene50985:CDS 35.0%
GAGCTTATAAGTATTAGCCA+GGG - chr3.2:28859404-28859423 None:intergenic 35.0%
GATCCGACTAATTAATTCCT+CGG + chr3.2:28860018-28860037 MS.gene50985:intron 35.0%
GATTAAAAAAGGAACAGCTC+AGG + chr3.2:28862573-28862592 MS.gene50985:intron 35.0%
GGAAAGAGAAAACCAAGTTA+AGG - chr3.2:28861506-28861525 None:intergenic 35.0%
GTAAGGACTGTATCTAAGTT+TGG - chr3.2:28861611-28861630 None:intergenic 35.0%
GTAGATTCATTAGTGCAACA+AGG + chr3.2:28862342-28862361 MS.gene50985:intron 35.0%
GTGATGACTTATACTAGCAA+TGG - chr3.2:28862317-28862336 None:intergenic 35.0%
GTTTGCAATATGCATGCTAT+GGG + chr3.2:28862778-28862797 MS.gene50985:intron 35.0%
TAGTTGTTCTTCCAGTTGAT+TGG - chr3.2:28860250-28860269 None:intergenic 35.0%
TATGACCTTATCCATGCAAA+TGG + chr3.2:28863210-28863229 MS.gene50985:CDS 35.0%
TATTTCGCAAGTTCGGTTAT+TGG + chr3.2:28860710-28860729 MS.gene50985:intron 35.0%
TCACTGAAAGCAAATTTAGC+AGG - chr3.2:28862985-28863004 None:intergenic 35.0%
TCAGTGCTTCATAGTTACAT+AGG + chr3.2:28860992-28861011 MS.gene50985:intron 35.0%
TCTCAAATTATTGCCAGTGT+AGG + chr3.2:28860941-28860960 MS.gene50985:intron 35.0%
TGGTCCACTTATTTCAGAAA+AGG + chr3.2:28863732-28863751 MS.gene50985:CDS 35.0%
TGTATCCACACAGTTATTTG+AGG + chr3.2:28861244-28861263 MS.gene50985:CDS 35.0%
TGTTTGCAATATGCATGCTA+TGG + chr3.2:28862777-28862796 MS.gene50985:intron 35.0%
TTATCAAAATATGCAACCGG+TGG - chr3.2:28862215-28862234 None:intergenic 35.0%
! ACTTGCAAGTGTTATTCCAT+TGG + chr3.2:28859107-28859126 MS.gene50985:CDS 35.0%
! AGCACAAGTTCAATTTGCTT+TGG + chr3.2:28859827-28859846 MS.gene50985:CDS 35.0%
! ATGAACTTTTGCATAGCACT+CGG - chr3.2:28862401-28862420 None:intergenic 35.0%
! ATGAATTTGGGACTAAAGAC+GGG + chr3.2:28862134-28862153 MS.gene50985:intron 35.0%
! CTATTTTGCATTCATTGAGG+TGG - chr3.2:28862468-28862487 None:intergenic 35.0%
! GATTGGTAACTTCCTTAACT+TGG + chr3.2:28861491-28861510 MS.gene50985:intron 35.0%
! GCATTTAGGTTTGATGTGTT+TGG - chr3.2:28862495-28862514 None:intergenic 35.0%
! TTCATTGTAGTTGCTTTGTG+TGG + chr3.2:28858580-28858599 MS.gene50985:CDS 35.0%
! TTCCTTGTTTGATTGGGATT+AGG - chr3.2:28862038-28862057 None:intergenic 35.0%
!! CATTTTGACATGTACAAGCT+AGG - chr3.2:28863282-28863301 None:intergenic 35.0%
!! CCGTTTTTCTTTTAACCTTG+GGG - chr3.2:28862866-28862885 None:intergenic 35.0%
!! CTCCGTTTTTCTTTTAACCT+TGG - chr3.2:28862868-28862887 None:intergenic 35.0%
!! CTTGGTTTTCTCTTTCCTTT+TGG + chr3.2:28861509-28861528 MS.gene50985:intron 35.0%
!! GTTCAATTTGCTTTGGAAAG+AGG + chr3.2:28859834-28859853 MS.gene50985:CDS 35.0%
!!! ATTGGAACTTTTTTCTCAGG+TGG + chr3.2:28860160-28860179 MS.gene50985:intron 35.0%
!!! GTTGTTGTTTTGGTACTACA+CGG - chr3.2:28862430-28862449 None:intergenic 35.0%
AACCAGATTCTGTGTCAACA+TGG + chr3.2:28860568-28860587 MS.gene50985:intron 40.0%
AACCTGGCATTATCAATGAC+AGG - chr3.2:28859736-28859755 None:intergenic 40.0%
AACGGCGTAGAATATCCTTT+AGG - chr3.2:28858922-28858941 None:intergenic 40.0%
AATAGCAGCTATAAGCGTAG+TGG - chr3.2:28859311-28859330 None:intergenic 40.0%
ACACTGCTAAACTTCTTTGC+TGG + chr3.2:28860326-28860345 MS.gene50985:CDS 40.0%
ACAGCATGTGACTGAAGATA+AGG + chr3.2:28862161-28862180 MS.gene50985:intron 40.0%
ACATGTGAATGCTTACAAGC+GGG + chr3.2:28861289-28861308 MS.gene50985:CDS 40.0%
ACCAATGGTCCATAATCCAA+AGG - chr3.2:28861069-28861088 None:intergenic 40.0%
ACGTTATATATGGATTCGGG+CGG + chr3.2:28861932-28861951 MS.gene50985:intron 40.0%
ACTTCTCTTTATCCAGCAGA+TGG - chr3.2:28861787-28861806 None:intergenic 40.0%
ACTTGATCATCCACATCATC+AGG - chr3.2:28858748-28858767 None:intergenic 40.0%
AGAAAGGTGAAATTGCGATC+TGG + chr3.2:28860362-28860381 MS.gene50985:CDS 40.0%
AGAGACGGTCCAAACAAATA+CGG - chr3.2:28860083-28860102 None:intergenic 40.0%
AGATTCTGTGTCAACATGGA+CGG + chr3.2:28860572-28860591 MS.gene50985:intron 40.0%
AGGCCGAGGAATTAATTAGT+CGG - chr3.2:28860024-28860043 None:intergenic 40.0%
AGGTGAAAACACCATTTGCA+TGG - chr3.2:28863224-28863243 None:intergenic 40.0%
ATAATGCCAGGTTGCTAGTT+GGG + chr3.2:28859743-28859762 MS.gene50985:intron 40.0%
ATCAAACCTAAATGCGGAGA+GGG + chr3.2:28862500-28862519 MS.gene50985:intron 40.0%
ATCCACACAGTTATTTGAGG+AGG + chr3.2:28861247-28861266 MS.gene50985:CDS 40.0%
ATTGATCATCGCCAGAGTTA+GGG - chr3.2:28863558-28863577 None:intergenic 40.0%
CACAGAATCCAAAGTAACAG+TGG - chr3.2:28862274-28862293 None:intergenic 40.0%
CACTAGAGATTCCTAGCAAT+TGG - chr3.2:28863430-28863449 None:intergenic 40.0%
CACTGCTAAACTTCTTTGCT+GGG + chr3.2:28860327-28860346 MS.gene50985:CDS 40.0%
CATGCAACCATTATGCATAG+AGG - chr3.2:28859354-28859373 None:intergenic 40.0%
CCAATGGTCCATAATCCAAA+GGG - chr3.2:28861068-28861087 None:intergenic 40.0%
CCATAATTTGGGAGAATCCA+GGG - chr3.2:28861390-28861409 None:intergenic 40.0%
CCTGGATTCTCCCAAATTAT+GGG + chr3.2:28861388-28861407 MS.gene50985:CDS 40.0%
CGATATTGAACCCAATTGCT+AGG + chr3.2:28863416-28863435 MS.gene50985:intron 40.0%
CGTAGAATATCCTTTAGGTG+CGG - chr3.2:28858917-28858936 None:intergenic 40.0%
CTCCTAATCCCAATCAAACA+AGG + chr3.2:28862033-28862052 MS.gene50985:intron 40.0%
GAGATGGAATACCAAAATGG+TGG + chr3.2:28863699-28863718 MS.gene50985:CDS 40.0%
GCAGGGTTAAAAGTGGAAAA+TGG - chr3.2:28859663-28859682 None:intergenic 40.0%
GTAGCAGCACTTAAGATTGA+AGG + chr3.2:28859428-28859447 MS.gene50985:intron 40.0%
GTAGCTTTCTCAGCAATTGT+AGG - chr3.2:28861428-28861447 None:intergenic 40.0%
GTCTCTAGACACCTAAGAAT+TGG + chr3.2:28860097-28860116 MS.gene50985:intron 40.0%
GTTATATTCCGAGATCAGGT+TGG + chr3.2:28863640-28863659 MS.gene50985:CDS 40.0%
TCAAAAGCTCCAGAAGGAAA+AGG - chr3.2:28859900-28859919 None:intergenic 40.0%
TGATGTGGATGATCAAGTCA+AGG + chr3.2:28858750-28858769 MS.gene50985:CDS 40.0%
TGCAATGTCAATTGCACCAA+GGG + chr3.2:28859794-28859813 MS.gene50985:CDS 40.0%
TGCAATTTCTCTTCTTCAGG+AGG - chr3.2:28858883-28858902 None:intergenic 40.0%
TGGATAAGGTCATAAGTCCT+CGG - chr3.2:28863204-28863223 None:intergenic 40.0%
TGGGAAAAGAAACACGAGAA+AGG + chr3.2:28860346-28860365 MS.gene50985:CDS 40.0%
TGTTGGTCCTCTATGCATAA+TGG + chr3.2:28859344-28859363 MS.gene50985:intron 40.0%
TTCACAGAGGAAAAGCCAAA+AGG - chr3.2:28861527-28861546 None:intergenic 40.0%
TTGCAATGTCAATTGCACCA+AGG + chr3.2:28859793-28859812 MS.gene50985:CDS 40.0%
TTGTAAGGCGCATTTGCAAA+CGG - chr3.2:28858973-28858992 None:intergenic 40.0%
TTGTTCTTCCAGTTGATTGG+AGG - chr3.2:28860247-28860266 None:intergenic 40.0%
TTTGGACCTCATCTTGAGTT+AGG + chr3.2:28863458-28863477 MS.gene50985:intron 40.0%
! AACGCATATCGGTGTGTTTT+TGG - chr3.2:28859472-28859491 None:intergenic 40.0%
! ACTGCATTAGATACTGGTTG+TGG + chr3.2:28859147-28859166 MS.gene50985:CDS 40.0%
! ATATTCGAGCGTGGATTGAT+TGG + chr3.2:28861458-28861477 MS.gene50985:CDS 40.0%
! ATCCTCATGATCCACCATTT+TGG - chr3.2:28863713-28863732 None:intergenic 40.0%
! ATTATGCTGCCTTTTCCTTC+TGG + chr3.2:28859888-28859907 MS.gene50985:CDS 40.0%
! CTGCATTAGATACTGGTTGT+GGG + chr3.2:28859148-28859167 MS.gene50985:CDS 40.0%
! CTTAAGATTGAAGGCATGTC+CGG + chr3.2:28859437-28859456 MS.gene50985:intron 40.0%
! GACATAAGCCACTGTTACTT+TGG + chr3.2:28862263-28862282 MS.gene50985:intron 40.0%
! TAACTCTCCTCAAGGCATTA+CGG - chr3.2:28862187-28862206 None:intergenic 40.0%
! TGCATTAGATACTGGTTGTG+GGG + chr3.2:28859149-28859168 MS.gene50985:CDS 40.0%
!! AAAATGGTGGATCATGAGGA+TGG + chr3.2:28863712-28863731 MS.gene50985:CDS 40.0%
!! AATGTGATGGACATGAATGC+TGG + chr3.2:28861344-28861363 MS.gene50985:CDS 40.0%
!! ACAAAATTATTGACTCGGGG+AGG + chr3.2:28861315-28861334 MS.gene50985:CDS 40.0%
!! CTTCATATTGAAGGTGTCTC+CGG + chr3.2:28860865-28860884 MS.gene50985:intron 40.0%
!! CTTTAGGTTTTCCCTAACTC+TGG + chr3.2:28863544-28863563 MS.gene50985:intron 40.0%
!! TACCAAAATGGTGGATCATG+AGG + chr3.2:28863708-28863727 MS.gene50985:CDS 40.0%
!! TTCCTGTCATTGATAATGCC+AGG + chr3.2:28859731-28859750 MS.gene50985:intron 40.0%
!!! AATGTTTTTAGGTTCCCTGG+TGG + chr3.2:28859042-28859061 MS.gene50985:CDS 40.0%
!!! ATGGACATGAATGCTGGTTT+TGG + chr3.2:28861350-28861369 MS.gene50985:CDS 40.0%
!!! CAAAGGAGTGGTTTTGGAAA+AGG + chr3.2:28858628-28858647 MS.gene50985:CDS 40.0%
AACAGATCCACTGGTGATTC+TGG - chr3.2:28861219-28861238 None:intergenic 45.0%
AACCACCAGGTCTAAGAACT+CGG - chr3.2:28860207-28860226 None:intergenic 45.0%
AAGAAGCCTTGACATCAGAC+AGG - chr3.2:28859557-28859576 None:intergenic 45.0%
AATTATTGCCAGTGTAGGCG+TGG + chr3.2:28860946-28860965 MS.gene50985:intron 45.0%
ACCGAACTTGCGAAATAGGT+TGG - chr3.2:28860707-28860726 None:intergenic 45.0%
ACGCTCGAATATAACGCCAA+GGG - chr3.2:28861450-28861469 None:intergenic 45.0%
AGAAGCCTTGACATCAGACA+GGG - chr3.2:28859556-28859575 None:intergenic 45.0%
AGAAGGCTTCACACCTGATA+CGG - chr3.2:28863173-28863192 None:intergenic 45.0%
AGACACTGCAGTAGAAACCA+TGG + chr3.2:28863354-28863373 MS.gene50985:intron 45.0%
AGACGAGATTTACCACAGTG+AGG - chr3.2:28863484-28863503 None:intergenic 45.0%
AGAGTAAGAACAGTGGCGTA+AGG - chr3.2:28861628-28861647 None:intergenic 45.0%
AGCGGTTATATTCCGAGATC+AGG + chr3.2:28863636-28863655 MS.gene50985:CDS 45.0%
AGGTTGGGACTAACCACTTA+CGG - chr3.2:28860691-28860710 None:intergenic 45.0%
ATGCCTTGAGGAGAGTTACA+CGG + chr3.2:28862189-28862208 MS.gene50985:intron 45.0%
ATTGCTGAGAAAGCTACCCT+TGG + chr3.2:28861431-28861450 MS.gene50985:CDS 45.0%
CAGCAAATTCCGATGATGTC+TGG + chr3.2:28860446-28860465 MS.gene50985:CDS 45.0%
CATCAAACCTAAATGCGGAG+AGG + chr3.2:28862499-28862518 MS.gene50985:intron 45.0%
CATTGATCATCGCCAGAGTT+AGG - chr3.2:28863559-28863578 None:intergenic 45.0%
CCAAGAACACCAATGATTGC+AGG - chr3.2:28859864-28859883 None:intergenic 45.0%
CCCAACCTATTTCGCAAGTT+CGG + chr3.2:28860703-28860722 MS.gene50985:intron 45.0%
CCCATAATTTGGGAGAATCC+AGG - chr3.2:28861391-28861410 None:intergenic 45.0%
CCCTGGATTCTCCCAAATTA+TGG + chr3.2:28861387-28861406 MS.gene50985:CDS 45.0%
CCCTTTGGATTATGGACCAT+TGG + chr3.2:28861065-28861084 MS.gene50985:intron 45.0%
CCGAACTTGCGAAATAGGTT+GGG - chr3.2:28860706-28860725 None:intergenic 45.0%
GAACAACATTGAGTCTCTCC+GGG - chr3.2:28861193-28861212 None:intergenic 45.0%
GACCACTACCCGTATTTGTT+TGG + chr3.2:28860071-28860090 MS.gene50985:intron 45.0%
GAGACGGTCCAAACAAATAC+GGG - chr3.2:28860082-28860101 None:intergenic 45.0%
GATAATGCCAGGTTGCTAGT+TGG + chr3.2:28859742-28859761 MS.gene50985:intron 45.0%
GATATTCTACGCCGTTTCCT+TGG + chr3.2:28858926-28858945 MS.gene50985:CDS 45.0%
GGAACAACATTGAGTCTCTC+CGG - chr3.2:28861194-28861213 None:intergenic 45.0%
GGCACATAATCACGACTCTT+AGG - chr3.2:28858952-28858971 None:intergenic 45.0%
GGTCCATAATCCAAAGGGTA+GGG - chr3.2:28861063-28861082 None:intergenic 45.0%
GGTGGTTACTGGATACTTTC+TGG + chr3.2:28860220-28860239 MS.gene50985:CDS 45.0%
GTAACTCCTGCTAAACCTAG+TGG + chr3.2:28861152-28861171 MS.gene50985:CDS 45.0%
GTCATAAGTCCTCGGATATG+TGG - chr3.2:28863196-28863215 None:intergenic 45.0%
GTCCAAACAAATACGGGTAG+TGG - chr3.2:28860076-28860095 None:intergenic 45.0%
GTCCATAATCCAAAGGGTAG+GGG - chr3.2:28861062-28861081 None:intergenic 45.0%
GTCCATGTTGACACAGAATC+TGG - chr3.2:28860573-28860592 None:intergenic 45.0%
GTCCTCCTCAAATAACTGTG+TGG - chr3.2:28861252-28861271 None:intergenic 45.0%
GTTGGCAGCGTTGTCAATTA+TGG + chr3.2:28859226-28859245 MS.gene50985:intron 45.0%
TAATCACGACTCTTAGGCCA+AGG - chr3.2:28858946-28858965 None:intergenic 45.0%
TAATGCCAGGTTGCTAGTTG+GGG + chr3.2:28859744-28859763 MS.gene50985:intron 45.0%
TACATGAGGAACAGATCCAC+TGG - chr3.2:28861228-28861247 None:intergenic 45.0%
TCAAACCTAAATGCGGAGAG+GGG + chr3.2:28862501-28862520 MS.gene50985:intron 45.0%
TCAACCGTCAGACTCTTGTA+AGG - chr3.2:28858988-28859007 None:intergenic 45.0%
TCATTGCTCTCGCTTGATCA+TGG - chr3.2:28858819-28858838 None:intergenic 45.0%
TCGATGTAGCTATCGTCACA+AGG - chr3.2:28858784-28858803 None:intergenic 45.0%
TCGCAAGTTCGGTTATTGGA+AGG + chr3.2:28860714-28860733 MS.gene50985:intron 45.0%
TGGAGATGGACCGTATCTTA+CGG + chr3.2:28863605-28863624 MS.gene50985:CDS 45.0%
TGGTCCATAATCCAAAGGGT+AGG - chr3.2:28861064-28861083 None:intergenic 45.0%
TGTCTGACATGCTCATACAC+CGG - chr3.2:28860887-28860906 None:intergenic 45.0%
TTAGGTTTGTGGCAAAGGAG+TGG + chr3.2:28858616-28858635 MS.gene50985:CDS 45.0%
TTCTCGCTGCTTGATTCCAT+GGG + chr3.2:28859932-28859951 MS.gene50985:CDS 45.0%
TTCTTAGACCTGGTGGTTAC+TGG + chr3.2:28860209-28860228 MS.gene50985:CDS 45.0%
TTGAGAAGGCTGTGCAGAAT+TGG + chr3.2:28859004-28859023 MS.gene50985:CDS 45.0%
TTGAGGAGGACAACCGATTA+TGG + chr3.2:28861261-28861280 MS.gene50985:CDS 45.0%
TTGATTCCATGGGGTGCAAA+CGG + chr3.2:28859942-28859961 MS.gene50985:CDS 45.0%
! AACTTTTGCATAGCACTCGG+AGG - chr3.2:28862398-28862417 None:intergenic 45.0%
! ACTCACCATGATAATGACGC+TGG + chr3.2:28858718-28858737 MS.gene50985:CDS 45.0%
! ATCGTTTTATAACGAGGCCG+AGG - chr3.2:28860038-28860057 None:intergenic 45.0%
! CCTGCAATCATTGGTGTTCT+TGG + chr3.2:28859861-28859880 MS.gene50985:CDS 45.0%
! GCACCGACACTTCATATTGA+AGG + chr3.2:28860856-28860875 MS.gene50985:intron 45.0%
! GGCAATCAGCATTTGTTACC+GGG + chr3.2:28862799-28862818 MS.gene50985:intron 45.0%
! GGGCAATCAGCATTTGTTAC+CGG + chr3.2:28862798-28862817 MS.gene50985:intron 45.0%
! GGGTAGTGGTCTAAAGCTTA+TGG - chr3.2:28860062-28860081 None:intergenic 45.0%
! TGGCATGTTTCTACCGTAAG+TGG + chr3.2:28860675-28860694 MS.gene50985:intron 45.0%
! TTGTGGCAAAGGAGTGGTTT+TGG + chr3.2:28858622-28858641 MS.gene50985:CDS 45.0%
! TTTCTGGTCCTCCAATCAAC+TGG + chr3.2:28860236-28860255 MS.gene50985:CDS 45.0%
!! AGAGGTGTTCCTGCAATCAT+TGG + chr3.2:28859852-28859871 MS.gene50985:CDS 45.0%
!! CTCAGGTGGATTGTACATGA+AGG + chr3.2:28860174-28860193 MS.gene50985:intron 45.0%
!! GAAAGTATCCAGTAACCACC+AGG - chr3.2:28860220-28860239 None:intergenic 45.0%
!!! GGGAATGTTTTTAGGTTCCC+TGG + chr3.2:28859039-28859058 MS.gene50985:CDS 45.0%
!!! GTGTTTTTGGTGTCAGACAC+CGG - chr3.2:28859459-28859478 None:intergenic 45.0%
!!! TCCTTCTGGAGCTTTTGACA+TGG + chr3.2:28859902-28859921 MS.gene50985:CDS 45.0%
!! ATTATAAAATATAATATCTT+TGG + chr3.2:28862680-28862699 MS.gene50985:intron 5.0%
AAGCCTTCTCCACATATCCG+AGG + chr3.2:28863184-28863203 MS.gene50985:CDS 50.0%
AATGGCTTCCATGCACCACT+AGG - chr3.2:28861170-28861189 None:intergenic 50.0%
ACATTGAGTCTCTCCGGGAA+TGG - chr3.2:28861188-28861207 None:intergenic 50.0%
ACGTCCTGAAGATGAGCTTG+AGG + chr3.2:28860282-28860301 MS.gene50985:CDS 50.0%
ACTCTGGCGATGATCAATGC+AGG + chr3.2:28863560-28863579 MS.gene50985:intron 50.0%
AGCCCCTACCCTTTGGATTA+TGG + chr3.2:28861057-28861076 MS.gene50985:intron 50.0%
AGGAACAGCTCAGGACAAGA+CGG + chr3.2:28862582-28862601 MS.gene50985:intron 50.0%
AGTCCTCGGATATGTGGAGA+AGG - chr3.2:28863190-28863209 None:intergenic 50.0%
ATGAGCTTGAGGAGGAGCAA+AGG + chr3.2:28860293-28860312 MS.gene50985:CDS 50.0%
ATGTAAGCATCAGCACCCTG+AGG - chr3.2:28859081-28859100 None:intergenic 50.0%
ATGTCAGACACTGACACACG+TGG + chr3.2:28860897-28860916 MS.gene50985:intron 50.0%
CAAGAGTCTGACGGTTGAGA+AGG + chr3.2:28858990-28859009 MS.gene50985:CDS 50.0%
CACACACGCAGGGTTAAAAG+TGG - chr3.2:28859670-28859689 None:intergenic 50.0%
CACGCTCGAATATAACGCCA+AGG - chr3.2:28861451-28861470 None:intergenic 50.0%
CATGCACCACTAGGTTTAGC+AGG - chr3.2:28861161-28861180 None:intergenic 50.0%
CGACTCTTAGGCCAAGGAAA+CGG - chr3.2:28858940-28858959 None:intergenic 50.0%
CGGAATATAACCGCTCCTTC+AGG - chr3.2:28863631-28863650 None:intergenic 50.0%
CTCCTTCAGGCCGTAAGATA+CGG - chr3.2:28863618-28863637 None:intergenic 50.0%
CTGCTAAACCTAGTGGTGCA+TGG + chr3.2:28861159-28861178 MS.gene50985:CDS 50.0%
CTTGGCGTTATATTCGAGCG+TGG + chr3.2:28861449-28861468 MS.gene50985:CDS 50.0%
GAAACTGAGTTCCACCACCA+GGG - chr3.2:28859059-28859078 None:intergenic 50.0%
GAAGCCTTGACATCAGACAG+GGG - chr3.2:28859555-28859574 None:intergenic 50.0%
GATAAGGCCGTAATGCCTTG+AGG + chr3.2:28862177-28862196 MS.gene50985:intron 50.0%
GATCCACTGGTGATTCTGGT+AGG - chr3.2:28861215-28861234 None:intergenic 50.0%
GCCATGTCAAAAGCTCCAGA+AGG - chr3.2:28859906-28859925 None:intergenic 50.0%
GCGTTCCAGCGTCATTATCA+TGG - chr3.2:28858726-28858745 None:intergenic 50.0%
GGACAAAGCATACAACCCCA+AGG + chr3.2:28862848-28862867 MS.gene50985:intron 50.0%
GGCAGCAAGAGTAAGAACAG+TGG - chr3.2:28861635-28861654 None:intergenic 50.0%
GGTGGAACTCAGTTTCCTCA+GGG + chr3.2:28859063-28859082 MS.gene50985:CDS 50.0%
GTGAGGCCTAACTCAAGATG+AGG - chr3.2:28863467-28863486 None:intergenic 50.0%
GTTCCTACCAGAATCACCAG+TGG + chr3.2:28861209-28861228 MS.gene50985:CDS 50.0%
GTTCTCGCTGCTTGATTCCA+TGG + chr3.2:28859931-28859950 MS.gene50985:CDS 50.0%
GTTGACCGAGTTCTTAGACC+TGG + chr3.2:28860199-28860218 MS.gene50985:CDS 50.0%
TATCTTACGGCCTGAAGGAG+CGG + chr3.2:28863618-28863637 MS.gene50985:CDS 50.0%
TCAGCACACCAACCTGATCT+CGG - chr3.2:28863651-28863670 None:intergenic 50.0%
TCCTCCTCAAGCTCATCTTC+AGG - chr3.2:28860289-28860308 None:intergenic 50.0%
TCCTGAAGATGAGCTTGAGG+AGG + chr3.2:28860285-28860304 MS.gene50985:CDS 50.0%
TCTCGCTGCTTGATTCCATG+GGG + chr3.2:28859933-28859952 MS.gene50985:CDS 50.0%
TCTTACCCCTCTCCGCATTT+AGG - chr3.2:28862509-28862528 None:intergenic 50.0%
TCTTGAGTTAGGCCTCACTG+TGG + chr3.2:28863469-28863488 MS.gene50985:intron 50.0%
TGCGCCTTACAAGAGTCTGA+CGG + chr3.2:28858981-28859000 MS.gene50985:CDS 50.0%
TGGTGGAACTCAGTTTCCTC+AGG + chr3.2:28859062-28859081 MS.gene50985:CDS 50.0%
TGTCTCATAGCCGCACCTAA+AGG + chr3.2:28858904-28858923 MS.gene50985:CDS 50.0%
TGTGCTTCATGAGAGTCCCT+TGG - chr3.2:28859813-28859832 None:intergenic 50.0%
! AGGTCTTGTATGCCGTCAAG+CGG + chr3.2:28863752-28863771 MS.gene50985:CDS 50.0%
! TACTGGCTATGACCATCTGC+TGG + chr3.2:28861772-28861791 MS.gene50985:intron 50.0%
!!! GTTTTTAGGTTCCCTGGTGG+TGG + chr3.2:28859045-28859064 MS.gene50985:CDS 50.0%
AGCTACATGCACACACACGC+AGG - chr3.2:28859681-28859700 None:intergenic 55.0%
ATGCTCCCCAACTAGCAACC+TGG - chr3.2:28859752-28859771 None:intergenic 55.0%
CTTGACATCAGACAGGGGCA+CGG - chr3.2:28859550-28859569 None:intergenic 55.0%
GACCGAGTTCTTAGACCTGG+TGG + chr3.2:28860202-28860221 MS.gene50985:CDS 55.0%
GACCGTATCTTACGGCCTGA+AGG + chr3.2:28863613-28863632 MS.gene50985:CDS 55.0%
GCTACATGCACACACACGCA+GGG - chr3.2:28859680-28859699 None:intergenic 55.0%
GCTCTCGCTTGATCATGGCA+GGG - chr3.2:28858814-28858833 None:intergenic 55.0%
GGAAACTGAGTTCCACCACC+AGG - chr3.2:28859060-28859079 None:intergenic 55.0%
GGAAGAACAACTACCGAGCG+TGG + chr3.2:28860257-28860276 MS.gene50985:CDS 55.0%
GTATGCCGTCAAGCGGTACT+GGG + chr3.2:28863759-28863778 MS.gene50985:CDS 55.0%
TGCAACCCAGTACCGCTTGA+CGG - chr3.2:28863767-28863786 None:intergenic 55.0%
TGCTCTCGCTTGATCATGGC+AGG - chr3.2:28858815-28858834 None:intergenic 55.0%
TGGCCGTGTAACTCTCCTCA+AGG - chr3.2:28862195-28862214 None:intergenic 55.0%
TGGTGCATGGAAGCCATTCC+CGG + chr3.2:28861172-28861191 MS.gene50985:CDS 55.0%
TGTATGCCGTCAAGCGGTAC+TGG + chr3.2:28863758-28863777 MS.gene50985:CDS 55.0%
TTCTCACCGTTTGCACCCCA+TGG - chr3.2:28859951-28859970 None:intergenic 55.0%
TTGCTCATCTTGAGCAGCCC+TGG + chr3.2:28859384-28859403 MS.gene50985:intron 55.0%
! TGGAAGTTTTGCTGCTGCCC+TGG + chr3.2:28861370-28861389 MS.gene50985:CDS 55.0%
!! GGGGAGGTATCGCAATGTGA+TGG + chr3.2:28861331-28861350 MS.gene50985:CDS 55.0%
ACTGTGCAGCCCCTACCCTT+TGG + chr3.2:28861050-28861069 MS.gene50985:intron 60.0%
ATGGCGACGAAAGGGAACCC+TGG + chr3.2:28858523-28858542 MS.gene50985:CDS 60.0%
CAACACTGCCACGCCTACAC+TGG - chr3.2:28860957-28860976 None:intergenic 60.0%
CGTGCCCCTGTCTGATGTCA+AGG + chr3.2:28859548-28859567 MS.gene50985:intron 60.0%
CTTCAGGACGTTGCCACGCT+CGG - chr3.2:28860273-28860292 None:intergenic 60.0%
GAGGAGAGTTACACGGCCAC+CGG + chr3.2:28862196-28862215 MS.gene50985:intron 60.0%
! CGCTGGAACGCCTGATGATG+TGG + chr3.2:28858735-28858754 MS.gene50985:CDS 60.0%
! GTCAAGCGGTACTGGGTTGC+AGG + chr3.2:28863766-28863785 MS.gene50985:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 28858523 28863810 28858523 ID=MS.gene50985
chr3.2 mRNA 28858523 28863810 28858523 ID=MS.gene50985.t1;Parent=MS.gene50985
chr3.2 exon 28858523 28859170 28858523 ID=MS.gene50985.t1.exon1;Parent=MS.gene50985.t1
chr3.2 CDS 28858523 28859170 28858523 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
chr3.2 exon 28859753 28859963 28859753 ID=MS.gene50985.t1.exon2;Parent=MS.gene50985.t1
chr3.2 CDS 28859753 28859963 28859753 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
chr3.2 exon 28860179 28860467 28860179 ID=MS.gene50985.t1.exon3;Parent=MS.gene50985.t1
chr3.2 CDS 28860179 28860467 28860179 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
chr3.2 exon 28861130 28861495 28861130 ID=MS.gene50985.t1.exon4;Parent=MS.gene50985.t1
chr3.2 CDS 28861130 28861495 28861130 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
chr3.2 exon 28863179 28863256 28863179 ID=MS.gene50985.t1.exon5;Parent=MS.gene50985.t1
chr3.2 CDS 28863179 28863256 28863179 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
chr3.2 exon 28863582 28863810 28863582 ID=MS.gene50985.t1.exon6;Parent=MS.gene50985.t1
chr3.2 CDS 28863582 28863810 28863582 ID=cds.MS.gene50985.t1;Parent=MS.gene50985.t1
Gene Sequence

>MS.gene50985

ATGGCGACGAAAGGGAACCCTGGAGATAATAGAAACAATAAAGGTCCAGTGTCAATTTTCATTGTAGTTGCTTTGTGTGGTTTCTTCTACATATTAGGTTTGTGGCAAAGGAGTGGTTTTGGAAAAGGAGATAGCATTGCTGTTGAGATTACTAAACACACAGATTGTAGTGTTCTCTCTGATCTAAATTACGAAACTCACCATGATAATGACGCTGGAACGCCTGATGATGTGGATGATCAAGTCAAGGAATTCAAGCCTTGTGACGATAGCTACATCGATTACACACCCTGCCATGATCAAGCGAGAGCAATGACGTTTCCGCGAGAGAATATGAATTATAGAGAAAGGCATTGTCCTCCTGAAGAAGAGAAATTGCATTGTCTCATAGCCGCACCTAAAGGATATTCTACGCCGTTTCCTTGGCCTAAGAGTCGTGATTATGTGCCGTTTGCAAATGCGCCTTACAAGAGTCTGACGGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGGAATGTTTTTAGGTTCCCTGGTGGTGGAACTCAGTTTCCTCAGGGTGCTGATGCTTACATTAATCAACTTGCAAGTGTTATTCCATTGGATAATGGGATGATTAGAACTGCATTAGATACTGGTTGTGGGGTAAGTCAAATCCTACTAACCTAACATCCTTGTTTATATATAAATAAACTATTTAGTTGGCAGCGTTGTCAATTATGGATTGTTCAAATTCCCTTACTAAATAATGTATCACGGAAGAAGAAAACTTTGTTCAAATTCCACTACGCTTATAGCTGCTATTTAACGACATTGTTTGTTGGTCCTCTATGCATAATGGTTGCATGAAAAATAAAATTGCTCATCTTGAGCAGCCCTGGCTAATACTTATAAGCTCTGTCGTAGCAGCACTTAAGATTGAAGGCATGTCCGGTGTCTGACACCAAAAACACACCGATATGCGTTGTTACATTCAATTAATTGATTTTCTCAAATCATTATCTGTGTTGGAATGTCAGTGCCGTGCCCCTGTCTGATGTCAAGGCTTCTTAGCTTATAAGCTTTTCTAGTAGAAGCTTACGCTTCTGAATGCTTAAACCATGCAAAATTTTCTCTTTTACAATTGTTTCTTTCCCATTTTCCACTTTTAACCCTGCGTGTGTGTGCATGTAGCTTCTACTTGTGTATTCATGCTCTATCTCATTTTCCTGTCATTGATAATGCCAGGTTGCTAGTTGGGGAGCATATTTGTTCAAGAAAAATGTTATTGCAATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCTGCAATCATTGGTGTTCTTGGAACAATTATGCTGCCTTTTCCTTCTGGAGCTTTTGACATGGCACATTGTTCTCGCTGCTTGATTCCATGGGGTGCAAACGGTGAGAATACTTATGAGTTTTTTTGGCCAATGTTGATTGAAATATAATCTATTGGATCCGACTAATTAATTCCTCGGCCTCGTTATAAAACGATTCCATAAGCTTTAGACCACTACCCGTATTTGTTTGGACCGTCTCTAGACACCTAAGAATTGGATTCATATACTAAATCTATATTGATTATTAAACCATAATAATTGGAACTTTTTTCTCAGGTGGATTGTACATGAAGGAAGTTGACCGAGTTCTTAGACCTGGTGGTTACTGGATACTTTCTGGTCCTCCAATCAACTGGAAGAACAACTACCGAGCGTGGCAACGTCCTGAAGATGAGCTTGAGGAGGAGCAAAGGCAAATTGAGAACACTGCTAAACTTCTTTGCTGGGAAAAGAAACACGAGAAAGGTGAAATTGCGATCTGGAGAAAAGCATTAAACATTGATGAATGCGGTGAGCAAGATACTCAACCTACAATATGTGAATCAGCAAATTCCGATGATGTCTGGTAATTGCTTCTCTTCTCTCTCCCCCCTTTTCTTTTTTTCTTTTGCTTCACTGGTTAGTTCAGAAATTATGTTCAGATAGTCAGATACCTATTATTCTTAAACCAGATTCTGTGTCAACATGGACGGACAACACTAATTATTCTTCTTCACAATTTACACGTAATTAATATTTAATTGTATACCCTGTTTTTGAAAAGAAAAACAGATGGCATGTTTCTACCGTAAGTGGTTAGTCCCAACCTATTTCGCAAGTTCGGTTATTGGAAGGATTTAACAGAAACTCCGATTTTTATTCTATATGCATTATGCAATAATTACTTATTTGCTTGTAAAATGGTGTCTTTCATGATATTGAGTGCTTAAGAAACATGTTTTCTTAGGTATGAAGCACCGACACTTCATATTGAAGGTGTCTCCGGTGTATGAGCATGTCAGACACTGACACACGTGGTTACAATCAAATATTTCATTTTCTCAAATTATTGCCAGTGTAGGCGTGGCAGTGTTGTGTCTGTTGTCTGTGTCAGTGCTTCATAGTTACATAGGCATCACAGTTTTTCAGTCTTTTATGATGTGAAATTACTGTGCAGCCCCTACCCTTTGGATTATGGACCATTGGTTTTGTTTTCAATACTCATCTAAATGGTTAGACAATGTCTAGGTACAAGAAGATGGACAATTGTGTAACTCCTGCTAAACCTAGTGGTGCATGGAAGCCATTCCCGGAGAGACTCAATGTTGTTCCTACCAGAATCACCAGTGGATCTGTTCCTCATGTATCCACACAGTTATTTGAGGAGGACAACCGATTATGGAAGAAACATGTGAATGCTTACAAGCGGGTTAACAAAATTATTGACTCGGGGAGGTATCGCAATGTGATGGACATGAATGCTGGTTTTGGAAGTTTTGCTGCTGCCCTGGATTCTCCCAAATTATGGGTTATGAATGTCGTGCCTACAATTGCTGAGAAAGCTACCCTTGGCGTTATATTCGAGCGTGGATTGATTGGAATTTATCATGATTGGTAACTTCCTTAACTTGGTTTTCTCTTTCCTTTTGGCTTTTCCTCTGTGAATTTTATTAGTCATTGAGTTGGTTATCTTTTTCTATAATTTTCTCCCTGAATCTATAAAGAACCAAACTTAGATACAGTCCTTACGCCACTGTTCTTACTCTTGCTGCCACTTCAAGAAAGTTTTTTCACACATTAGTAAAACTGTGGTGACAGATATGCTATATTTTTTAGAATATAGCACTGTCCCTAATCCATTTATAAATTAGGATGTCAACATTAAGATTATACTGGCTATGACCATCTGCTGGATAAAGAGAAGTGTAAATATTATAGCATTTGGTGTATTGTTAGAATTAAAGAAAAGTAACAATGAAGTAGGAATGTTTTGGTGATTTATTCAGAATTTTGAATGGTTCGTGTGTTTTATTGAAGAATTTTTTTGTTGACGTTATATATGGATTCGGGCGGAGAGTGAACTCTGAATTATTGAGTACAACAATGATGTGTTACAAAATCGAAAACAATATGTCTTTATATAGTACTAAACTCCTAATCCCAATCAAACAAGGAAGCATATAAATAAATATGAAAACCTCTTCTGAATTAGTCTAAGATACATATCATTTGGCACTTGAAACTCAAGCATAATGAATTTGGGACTAAAGACGGGATGAACAGCATGTGACTGAAGATAAGGCCGTAATGCCTTGAGGAGAGTTACACGGCCACCGGTTGCATATTTTGATAAGCACAGGGCTCGTGTGTGAGTCATGACCGACATAAGCCACTGTTACTTTGGATTCTGTGTGAGTTGTGACCAACATAAGCCATTGCTAGTATAAGTCATCACTACTGGTAGATTCATTAGTGCAACAAGGTCATCATGACAAACACTTTCACATGTTTTTCCTCCGAGTGCTATGCAAAAGTTCATAATAAGCCGTGTAGTACCAAAACAACAACATATCAGATATATAGCCACCTCAATGAATGCAAAATAGTTGACCAAACACATCAAACCTAAATGCGGAGAGGGGTAAGAAATTAGTCAGATCTGTAACTGTTCTAAACTTTGGGGAACTTAATGATTAAAAAAGGAACAGCTCAGGACAAGACGGATGTACCACTTTAATACCTTGTTCAGATTTAAGTGATTCAAGTAGAGAAGGAAGACAAAAGAGAACAAAATATAAATTATAAAATATAATATCTTTGGTGTGTTTATCAGGGATCTGTTTGTTTGCTGCAGTACATTTTAGTAGTCAAAAGTTACAATGATATTTATTTCATTGTTTGCAATATGCATGCTATGGGCAATCAGCATTTGTTACCGGGTATAGACGGTAGATGTTTTACATATTGGACAAAGCATACAACCCCAAGGTTAAAAGAAAAACGGAGTTTAAAGAGATGAAGCATCAAAATCAATATAGTAGATGATCTGCTGAAATATGTAATAGGATCACGCTCAGAATTTCTTCTTTCAGAAACAAATCCTGCTAAATTTGCTTTCAGTGAACTTTCATATATTATAACCTGCAGAAATTTTTAATCTGAATTTAGTATGGCAATGTTAAGTAAGCAATAGATGGTCAATGTTGAGCTTACTTGTATGTCAATAATTATGTTATCATTCAATTCAAAAACCTAGCCTTGTTCTGTTTATTAATTAATTATCTATTTCCGTATCAGGTGTGAAGCCTTCTCCACATATCCGAGGACTTATGACCTTATCCATGCAAATGGTGTTTTCACCTTGTACAAGAATGCGTAAGTTTATTTCTCTTTCTTTCCTAGCTTGTACATGTCAAAATGATTTTACCAGAAACAAAAAAACAAATTGGCAATAATGTAAAATGCTTAAAATAGACACTGCAGTAGAAACCATGGTTATCAGTATCTTACAAACATGCGAGTTGTATCTCAATTCGATATTGAACCCAATTGCTAGGAATCTCTAGTGTGTATCTTTTTGGACCTCATCTTGAGTTAGGCCTCACTGTGGTAAATCTCGTCTCGTTGTGATGAAGCACTACCTAATCGTTTAATGCAAACTACTTTAGGTTTTCCCTAACTCTGGCGATGATCAATGCAGGTGTAATGCAGAAGATATTTTATTGGAGATGGACCGTATCTTACGGCCTGAAGGAGCGGTTATATTCCGAGATCAGGTTGGTGTGCTGAAGCAAGTGAAAAGAATTGCAAAAGGAATGAGATGGAATACCAAAATGGTGGATCATGAGGATGGTCCACTTATTTCAGAAAAGGTCTTGTATGCCGTCAAGCGGTACTGGGTTGCAGGTGACAACACCACAAGCTCATAG
Protein sequence

>MS.gene50985.t1

MATKGNPGDNRNNKGPVSIFIVVALCGFFYILGLWQRSGFGKGDSIAVEITKHTDCSVLSDLNYETHHDNDAGTPDDVDDQVKEFKPCDDSYIDYTPCHDQARAMTFPRENMNYRERHCPPEEEKLHCLIAAPKGYSTPFPWPKSRDYVPFANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYINQLASVIPLDNGMIRTALDTGCGVASWGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGAFDMAHCSRCLIPWGANGGLYMKEVDRVLRPGGYWILSGPPINWKNNYRAWQRPEDELEEEQRQIENTAKLLCWEKKHEKGEIAIWRKALNIDECGEQDTQPTICESANSDDVWYKKMDNCVTPAKPSGAWKPFPERLNVVPTRITSGSVPHVSTQLFEEDNRLWKKHVNAYKRVNKIIDSGRYRNVMDMNAGFGSFAAALDSPKLWVMNVVPTIAEKATLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGVFTLYKNACNAEDILLEMDRILRPEGAVIFRDQVGVLKQVKRIAKGMRWNTKMVDHEDGPLISEKVLYAVKRYWVAGDNTTSS