Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52075.t1 | RHN61504.1 | 100 | 80 | 0 | 0 | 1 | 80 | 1 | 80 | 2.00E-36 | 162.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52075.t1 | P27484 | 73.1 | 78 | 21 | 0 | 2 | 79 | 5 | 82 | 1.1e-27 | 124.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52075.t1 | A0A396IB73 | 100.0 | 80 | 0 | 0 | 1 | 80 | 1 | 80 | 1.4e-36 | 162.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene52075.t1 | TF | CSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene52075 | 0.842088 | 3.20E-58 | -1.69E-46 |
| MS.gene049340 | MS.gene52075 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene049341 | MS.gene52075 | 0.827956 | 1.17E-54 | -1.69E-46 |
| MS.gene049653 | MS.gene52075 | 0.806943 | 6.44E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene52075 | 0.803495 | 3.39E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene52075 | 0.834329 | 3.19E-56 | -1.69E-46 |
| MS.gene050437 | MS.gene52075 | 0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene52075 | 0.808749 | 2.66E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene52075 | 0.835728 | 1.42E-56 | -1.69E-46 |
| MS.gene050955 | MS.gene52075 | 0.829481 | 5.03E-55 | -1.69E-46 |
| MS.gene051241 | MS.gene52075 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene52075 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene05134 | MS.gene52075 | 0.846488 | 2.10E-59 | -1.69E-46 |
| MS.gene051903 | MS.gene52075 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene052239 | MS.gene52075 | -0.8015 | 8.75E-49 | -1.69E-46 |
| MS.gene052879 | MS.gene52075 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene52075 | 0.852111 | 5.72E-61 | -1.69E-46 |
| MS.gene05364 | MS.gene52075 | 0.816753 | 4.70E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene52075 | 0.818014 | 2.44E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene52075 | 0.840287 | 9.52E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene52075 | 0.818577 | 1.82E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene52075 | 0.822818 | 1.93E-53 | -1.69E-46 |
| MS.gene055555 | MS.gene52075 | 0.817358 | 3.44E-52 | -1.69E-46 |
| MS.gene055808 | MS.gene52075 | 0.814467 | 1.52E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene52075 | 0.817997 | 2.47E-52 | -1.69E-46 |
| MS.gene057287 | MS.gene52075 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene057392 | MS.gene52075 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene52075 | 0.817666 | 2.93E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene52075 | 0.882062 | 1.43E-70 | -1.69E-46 |
| MS.gene05795 | MS.gene52075 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene058216 | MS.gene52075 | 0.814368 | 1.60E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene52075 | 0.802513 | 5.42E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene52075 | 0.826013 | 3.42E-54 | -1.69E-46 |
| MS.gene05978 | MS.gene52075 | 0.821495 | 3.92E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene52075 | 0.813864 | 2.06E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene52075 | 0.830499 | 2.84E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52075.t1 | AT2G21060 | 54.808 | 208 | 67 | 2 | 3 | 201 | 12 | 201 | 3.48e-42 | 141 |
| MS.gene52075.t1 | AT4G36020 | 45.024 | 211 | 99 | 3 | 1 | 197 | 6 | 213 | 1.35e-40 | 139 |
| MS.gene52075.t1 | AT4G36020 | 43.458 | 214 | 106 | 3 | 1 | 200 | 6 | 218 | 1.69e-39 | 137 |
| MS.gene52075.t1 | AT4G36020 | 43.458 | 214 | 106 | 3 | 1 | 200 | 6 | 218 | 1.69e-39 | 137 |
| MS.gene52075.t1 | AT2G17870 | 49.485 | 194 | 74 | 3 | 2 | 195 | 7 | 176 | 3.36e-35 | 126 |
| MS.gene52075.t1 | AT4G38680 | 53.023 | 215 | 61 | 2 | 3 | 198 | 8 | 201 | 2.34e-32 | 116 |
Find 105 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGAGGTGGAGGTGGTTA+TGG | 0.260026 | 4.1:+29981473 | MS.gene52075:CDS |
| TATGGAGGAGGTGGTGGTTA+TGG | 0.270427 | 4.1:+29981491 | MS.gene52075:CDS |
| GGTGGCTATGGTGGAGGTGG+AGG | 0.278061 | 4.1:+29981464 | MS.gene52075:CDS |
| TATGGTGGTGGTGGAAGAGG+TGG | 0.295052 | 4.1:+29981509 | MS.gene52075:CDS |
| GGCCGTGGAGGAGGCGGTGG+TGG | 0.304119 | 4.1:+29981533 | MS.gene52075:CDS |
| ATGAGTGGGTCAAAATTAAC+TGG | 0.306323 | 4.1:+29981119 | MS.gene52075:CDS |
| GGTTACGGTGGTGGCGGTTA+TGG | 0.316775 | 4.1:+29981407 | MS.gene52075:CDS |
| GGTGGTGGCTATGGTGGAGG+TGG | 0.316871 | 4.1:+29981461 | MS.gene52075:CDS |
| CCTGATGGTGCTTCTGTTCA+AGG | 0.337236 | 4.1:+29981332 | MS.gene52075:CDS |
| GGCGGTTATGGTGGTGGAGG+TGG | 0.338413 | 4.1:+29981419 | MS.gene52075:CDS |
| TTCAATGATCAGAAGGGGTT+TGG | 0.339445 | 4.1:+29981155 | MS.gene52075:CDS |
| GGTGGTGGAGGTGGTGGCTA+TGG | 0.354809 | 4.1:+29981428 | MS.gene52075:CDS |
| GGAGGTGGAGGTGGTTATGG+AGG | 0.355689 | 4.1:+29981476 | MS.gene52075:CDS |
| GGCTATGGTGGAGGTGGAGG+TGG | 0.356154 | 4.1:+29981467 | MS.gene52075:CDS |
| GGAAGAGGAGGTGGTGGCTA+TGG | 0.357145 | 4.1:+29981452 | MS.gene52075:CDS |
| GGTGGAGGTGGTGGCTATGG+TGG | 0.367938 | 4.1:+29981431 | MS.gene52075:CDS |
| GGTGGCGGTGGAAGGTATGG+TGG | 0.385369 | 4.1:+29981614 | MS.gene52075:CDS |
| GGCTATGGTGGAAGAGGAGG+TGG | 0.386440 | 4.1:+29981443 | MS.gene52075:CDS |
| GGTTATGGTGGTGGTGGAAG+AGG | 0.389445 | 4.1:+29981506 | MS.gene52075:CDS |
| AACTCCTCACTTCCATCATC+AGG | 0.391515 | 4.1:-29981188 | None:intergenic |
| GGTGGTTATGGAGGAGGTGG+TGG | 0.392511 | 4.1:+29981485 | MS.gene52075:CDS |
| TGTACCAGCGGTGGAGGTGG+TGG | 0.393098 | 4.1:+29981596 | MS.gene52075:CDS |
| TGCTACAGCTGTGGTGAATC+TGG | 0.396062 | 4.1:+29981662 | MS.gene52075:CDS |
| CGCGGAGGCGGTGGAGGTGG+AGG | 0.397046 | 4.1:+29981362 | MS.gene52075:CDS |
| GGAGGTGGTGGTTATGGTGG+TGG | 0.397534 | 4.1:+29981497 | MS.gene52075:CDS |
| TGGTGGTGGTGGAAGAGGTG+GGG | 0.399416 | 4.1:+29981511 | MS.gene52075:CDS |
| ATGGTGGTGGTGGAAGAGGT+GGG | 0.402824 | 4.1:+29981510 | MS.gene52075:CDS |
| AGCGGTGGAGGTGGTGGCGG+TGG | 0.408716 | 4.1:+29981602 | MS.gene52075:CDS |
| AGACGCGGAGGCGGTGGAGG+TGG | 0.408957 | 4.1:+29981359 | MS.gene52075:CDS |
| TATGGTGGTGGTGGAGGTAG+TGG | 0.410545 | 4.1:+29981629 | MS.gene52075:CDS |
| GGTGGTGGAGGTAGTGGCGG+TGG | 0.414211 | 4.1:+29981635 | MS.gene52075:CDS |
| GAACGTGGTGGTGGTGGTTA+CGG | 0.418432 | 4.1:+29981392 | MS.gene52075:CDS |
| GGTGGAGGTGGTTATGGAGG+AGG | 0.420020 | 4.1:+29981479 | MS.gene52075:CDS |
| GGTGGTGGCGGTGGAAGGTA+TGG | 0.420290 | 4.1:+29981611 | MS.gene52075:CDS |
| GGTGGAAGGTATGGTGGTGG+TGG | 0.421803 | 4.1:+29981620 | MS.gene52075:CDS |
| GGTGGTGGTGGAAGAGGTGG+GGG | 0.422868 | 4.1:+29981512 | MS.gene52075:CDS |
| AGAGGAGGTGGTGGCTATGG+TGG | 0.424510 | 4.1:+29981455 | MS.gene52075:CDS |
| GGAGGTGGTTATGGAGGAGG+TGG | 0.426099 | 4.1:+29981482 | MS.gene52075:CDS |
| GGAAGGTATGGTGGTGGTGG+AGG | 0.427979 | 4.1:+29981623 | MS.gene52075:CDS |
| TGTTACAACTGTGGTGAATC+TGG | 0.428449 | 4.1:+29981557 | MS.gene52075:CDS |
| CATCGGTTTGGATCTGAGAT+TGG | 0.429198 | 4.1:-29981220 | None:intergenic |
| TTTGCAAGAGATTGTCCAAC+AGG | 0.433866 | 4.1:+29981689 | MS.gene52075:CDS |
| AATTAACTGGGAAGGTGAAA+TGG | 0.440654 | 4.1:+29981132 | MS.gene52075:CDS |
| TCCAAGGCTGTTAGTGTGAC+TGG | 0.440806 | 4.1:+29981308 | MS.gene52075:CDS |
| GTGGAGGTGGTGGCGGTGGA+AGG | 0.441131 | 4.1:+29981606 | MS.gene52075:CDS |
| GGATCGAGACGCGGAGGCGG+TGG | 0.443390 | 4.1:+29981353 | MS.gene52075:CDS |
| TCGAGACGCGGAGGCGGTGG+AGG | 0.443487 | 4.1:+29981356 | MS.gene52075:CDS |
| AGGGAGTGTACCAGCGGTGG+AGG | 0.448006 | 4.1:+29981590 | MS.gene52075:CDS |
| ACCAGCGGTGGAGGTGGTGG+CGG | 0.451970 | 4.1:+29981599 | MS.gene52075:CDS |
| GGAGGAGGTGGTGGTTATGG+TGG | 0.453646 | 4.1:+29981494 | MS.gene52075:CDS |
| GGTGGTGGCGGTTATGGTGG+TGG | 0.454112 | 4.1:+29981413 | MS.gene52075:CDS |
| GGTTATGGTGGTGGAGGTGG+TGG | 0.456422 | 4.1:+29981422 | MS.gene52075:CDS |
| GAGTGTACCAGCGGTGGAGG+TGG | 0.465774 | 4.1:+29981593 | MS.gene52075:CDS |
| GGTGGTGGTGGTTACGGTGG+TGG | 0.466074 | 4.1:+29981398 | MS.gene52075:CDS |
| GGTGGTGGTTATGGTGGTGG+TGG | 0.466088 | 4.1:+29981500 | MS.gene52075:CDS |
| GGCGGTGGAAGGTATGGTGG+TGG | 0.466630 | 4.1:+29981617 | MS.gene52075:CDS |
| GGTGGTGGCTATGGTGGAAG+AGG | 0.468322 | 4.1:+29981437 | MS.gene52075:CDS |
| GAGAGCGGAATCCATCGGTT+TGG | 0.468363 | 4.1:-29981232 | None:intergenic |
| GGTGGTTATGAACGTGGTGG+TGG | 0.470130 | 4.1:+29981383 | MS.gene52075:CDS |
| GGTTATGAACGTGGTGGTGG+TGG | 0.471310 | 4.1:+29981386 | MS.gene52075:CDS |
| GGATTCATCACCCCTGATGA+TGG | 0.483119 | 4.1:+29981176 | MS.gene52075:CDS |
| GGAGGCGGTGGAGGTGGAGG+TGG | 0.488667 | 4.1:+29981365 | MS.gene52075:CDS |
| GGAGGTGGTGGCTATGGTGG+AGG | 0.490451 | 4.1:+29981458 | MS.gene52075:CDS |
| GGTGGTGGTTACGGTGGTGG+CGG | 0.491692 | 4.1:+29981401 | MS.gene52075:CDS |
| ACCGCCACCACCTCCACCGC+TGG | 0.498982 | 4.1:-29981600 | None:intergenic |
| CTTCAACGAGCGCTGCCTGT+TGG | 0.500201 | 4.1:-29981704 | None:intergenic |
| GGTGGCGGTTATGGTGGTGG+AGG | 0.507909 | 4.1:+29981416 | MS.gene52075:CDS |
| TCCAGTCACACTAACAGCCT+TGG | 0.511590 | 4.1:-29981309 | None:intergenic |
| GGTGGCTATGGTGGAAGAGG+AGG | 0.517158 | 4.1:+29981440 | MS.gene52075:CDS |
| CCTTGAACAGAAGCACCATC+AGG | 0.525346 | 4.1:-29981332 | None:intergenic |
| GGTGGTGGTGGAGGTAGTGG+CGG | 0.527726 | 4.1:+29981632 | MS.gene52075:CDS |
| TACGGTGGTGGCGGTTATGG+TGG | 0.535417 | 4.1:+29981410 | MS.gene52075:CDS |
| TATGGTGGAAGAGGAGGTGG+TGG | 0.537181 | 4.1:+29981446 | MS.gene52075:CDS |
| CAAGGATCGAGACGCGGAGG+CGG | 0.550280 | 4.1:+29981350 | MS.gene52075:CDS |
| AGCAAGAGAGCGGAATCCAT+CGG | 0.551382 | 4.1:-29981237 | None:intergenic |
| GTTAGTGTGACTGGACCTGA+TGG | 0.557938 | 4.1:+29981317 | MS.gene52075:CDS |
| ATCCACCACCGCCTCCTCCA+CGG | 0.561523 | 4.1:-29981535 | None:intergenic |
| AAAATTCAATTCATCATGAG+TGG | 0.563070 | 4.1:+29981104 | None:intergenic |
| GAAATGGTTCAATGATCAGA+AGG | 0.565831 | 4.1:+29981148 | MS.gene52075:CDS |
| GGATTCCGCTCTCTTGCTGA+AGG | 0.568654 | 4.1:+29981242 | MS.gene52075:CDS |
| CGTGGTGGTGGTGGTTACGG+TGG | 0.581197 | 4.1:+29981395 | MS.gene52075:CDS |
| ACTCCTCACTTCCATCATCA+GGG | 0.589005 | 4.1:-29981187 | None:intergenic |
| AAATTCAATTCATCATGAGT+GGG | 0.603310 | 4.1:+29981105 | None:intergenic |
| GCAAGGGAGTGTACCAGCGG+TGG | 0.606856 | 4.1:+29981587 | MS.gene52075:CDS |
| CTGTGGTGAATCTGGCCACA+TGG | 0.607505 | 4.1:+29981565 | MS.gene52075:CDS |
| GTGAATCTGGCCACATGGCA+AGG | 0.610638 | 4.1:+29981570 | MS.gene52075:CDS |
| CAATCTCAGATCCAAACCGA+TGG | 0.617544 | 4.1:+29981221 | MS.gene52075:CDS |
| TGATAACGATGGAAGATCCA+AGG | 0.617668 | 4.1:+29981292 | MS.gene52075:CDS |
| TGAATCTGGCCACATGGCAA+GGG | 0.618787 | 4.1:+29981571 | MS.gene52075:CDS |
| AAATGGTTCAATGATCAGAA+GGG | 0.619071 | 4.1:+29981149 | MS.gene52075:CDS |
| CACCCCTGATGATGGAAGTG+AGG | 0.619233 | 4.1:+29981184 | MS.gene52075:CDS |
| AATGGTTCAATGATCAGAAG+GGG | 0.619776 | 4.1:+29981150 | MS.gene52075:CDS |
| TGGGTCAAAATTAACTGGGA+AGG | 0.622767 | 4.1:+29981124 | MS.gene52075:CDS |
| GGTGGAAGCTGCTACAGCTG+TGG | 0.625709 | 4.1:+29981653 | MS.gene52075:CDS |
| GGTGGAGGTGGTTATGAACG+TGG | 0.641374 | 4.1:+29981377 | MS.gene52075:CDS |
| CAGATTGAGTCTGATAACGA+TGG | 0.643460 | 4.1:+29981281 | MS.gene52075:CDS |
| CTCCTCACTTCCATCATCAG+GGG | 0.654781 | 4.1:-29981186 | None:intergenic |
| TGAGTGGGTCAAAATTAACT+GGG | 0.660344 | 4.1:+29981120 | MS.gene52075:CDS |
| ATGGCAAGGGAGTGTACCAG+CGG | 0.661029 | 4.1:+29981584 | MS.gene52075:CDS |
| ATTCACCTTCAGCAAGAGAG+CGG | 0.661963 | 4.1:-29981247 | None:intergenic |
| TGGTACACTCCCTTGCCATG+TGG | 0.662957 | 4.1:-29981580 | None:intergenic |
| GTTCAAGGATCGAGACGCGG+AGG | 0.675795 | 4.1:+29981347 | MS.gene52075:CDS |
| GGAGGTGGTTATGAACGTGG+TGG | 0.695418 | 4.1:+29981380 | MS.gene52075:CDS |
| TCTGTTCAAGGATCGAGACG+CGG | 0.700237 | 4.1:+29981344 | MS.gene52075:CDS |
| GGTGGTGGATGTTACAACTG+TGG | 0.753886 | 4.1:+29981548 | MS.gene52075:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATGGTTCAATGATCAGAA+GGG | + | chr4.1:29981149-29981168 | MS.gene52075:CDS | 30.0% | |
| AATGGTTCAATGATCAGAAG+GGG | + | chr4.1:29981150-29981169 | MS.gene52075:CDS | 35.0% | |
| AATTAACTGGGAAGGTGAAA+TGG | + | chr4.1:29981132-29981151 | MS.gene52075:CDS | 35.0% | |
| ATGAGTGGGTCAAAATTAAC+TGG | + | chr4.1:29981119-29981138 | MS.gene52075:CDS | 35.0% | |
| GAAATGGTTCAATGATCAGA+AGG | + | chr4.1:29981148-29981167 | MS.gene52075:CDS | 35.0% | |
| TGAGTGGGTCAAAATTAACT+GGG | + | chr4.1:29981120-29981139 | MS.gene52075:CDS | 35.0% | |
| TGGGTCAAAATTAACTGGGA+AGG | + | chr4.1:29981124-29981143 | MS.gene52075:CDS | 40.0% | |
| TGTTACAACTGTGGTGAATC+TGG | + | chr4.1:29981557-29981576 | MS.gene52075:CDS | 40.0% | |
| TTCAATGATCAGAAGGGGTT+TGG | + | chr4.1:29981155-29981174 | MS.gene52075:CDS | 40.0% | |
| TTTGCAAGAGATTGTCCAAC+AGG | + | chr4.1:29981689-29981708 | MS.gene52075:CDS | 40.0% | |
| ! | CAGATTGAGTCTGATAACGA+TGG | + | chr4.1:29981281-29981300 | MS.gene52075:CDS | 40.0% |
| ! | TGATAACGATGGAAGATCCA+AGG | + | chr4.1:29981292-29981311 | MS.gene52075:CDS | 40.0% |
| AACTCCTCACTTCCATCATC+AGG | - | chr4.1:29981191-29981210 | None:intergenic | 45.0% | |
| ACTCCTCACTTCCATCATCA+GGG | - | chr4.1:29981190-29981209 | None:intergenic | 45.0% | |
| ATTCACCTTCAGCAAGAGAG+CGG | - | chr4.1:29981250-29981269 | None:intergenic | 45.0% | |
| CAATCTCAGATCCAAACCGA+TGG | + | chr4.1:29981221-29981240 | MS.gene52075:CDS | 45.0% | |
| !! | CATCGGTTTGGATCTGAGAT+TGG | - | chr4.1:29981223-29981242 | None:intergenic | 45.0% |
| AGCAAGAGAGCGGAATCCAT+CGG | - | chr4.1:29981240-29981259 | None:intergenic | 50.0% | |
| CTCCTCACTTCCATCATCAG+GGG | - | chr4.1:29981189-29981208 | None:intergenic | 50.0% | |
| GGATTCATCACCCCTGATGA+TGG | + | chr4.1:29981176-29981195 | MS.gene52075:CDS | 50.0% | |
| GTTAGTGTGACTGGACCTGA+TGG | + | chr4.1:29981317-29981336 | MS.gene52075:CDS | 50.0% | |
| TCCAAGGCTGTTAGTGTGAC+TGG | + | chr4.1:29981308-29981327 | MS.gene52075:CDS | 50.0% | |
| TCCAGTCACACTAACAGCCT+TGG | - | chr4.1:29981312-29981331 | None:intergenic | 50.0% | |
| TCTGTTCAAGGATCGAGACG+CGG | + | chr4.1:29981344-29981363 | MS.gene52075:CDS | 50.0% | |
| TGAATCTGGCCACATGGCAA+GGG | + | chr4.1:29981571-29981590 | MS.gene52075:CDS | 50.0% | |
| TGCTACAGCTGTGGTGAATC+TGG | + | chr4.1:29981662-29981681 | MS.gene52075:CDS | 50.0% | |
| ! | CCTGATGGTGCTTCTGTTCA+AGG | + | chr4.1:29981332-29981351 | MS.gene52075:CDS | 50.0% |
| ! | TATGGAGGAGGTGGTGGTTA+TGG | + | chr4.1:29981491-29981510 | MS.gene52075:CDS | 50.0% |
| !! | CCTTGAACAGAAGCACCATC+AGG | - | chr4.1:29981335-29981354 | None:intergenic | 50.0% |
| !! | GGTGGTGGATGTTACAACTG+TGG | + | chr4.1:29981548-29981567 | MS.gene52075:CDS | 50.0% |
| CTGTGGTGAATCTGGCCACA+TGG | + | chr4.1:29981565-29981584 | MS.gene52075:CDS | 55.0% | |
| GGAGGTGGTTATGAACGTGG+TGG | + | chr4.1:29981380-29981399 | MS.gene52075:CDS | 55.0% | |
| GGATTCCGCTCTCTTGCTGA+AGG | + | chr4.1:29981242-29981261 | MS.gene52075:CDS | 55.0% | |
| GGTGGAGGTGGTTATGAACG+TGG | + | chr4.1:29981377-29981396 | MS.gene52075:CDS | 55.0% | |
| GGTGGTTATGAACGTGGTGG+TGG | + | chr4.1:29981383-29981402 | MS.gene52075:CDS | 55.0% | |
| GTGAATCTGGCCACATGGCA+AGG | + | chr4.1:29981570-29981589 | MS.gene52075:CDS | 55.0% | |
| TGGTACACTCCCTTGCCATG+TGG | - | chr4.1:29981583-29981602 | None:intergenic | 55.0% | |
| ! | ATGGCAAGGGAGTGTACCAG+CGG | + | chr4.1:29981584-29981603 | MS.gene52075:CDS | 55.0% |
| ! | GAGAGCGGAATCCATCGGTT+TGG | - | chr4.1:29981235-29981254 | None:intergenic | 55.0% |
| ! | TATGGTGGAAGAGGAGGTGG+TGG | + | chr4.1:29981446-29981465 | MS.gene52075:CDS | 55.0% |
| !! | ATGGTGGTGGTGGAAGAGGT+GGG | + | chr4.1:29981510-29981529 | MS.gene52075:CDS | 55.0% |
| !! | CACCCCTGATGATGGAAGTG+AGG | + | chr4.1:29981184-29981203 | MS.gene52075:CDS | 55.0% |
| !! | GAACGTGGTGGTGGTGGTTA+CGG | + | chr4.1:29981392-29981411 | MS.gene52075:CDS | 55.0% |
| !! | GGTTATGAACGTGGTGGTGG+TGG | + | chr4.1:29981386-29981405 | MS.gene52075:CDS | 55.0% |
| !! | GGTTATGGTGGTGGTGGAAG+AGG | + | chr4.1:29981506-29981525 | MS.gene52075:CDS | 55.0% |
| !! | TATGGTGGTGGTGGAAGAGG+TGG | + | chr4.1:29981509-29981528 | MS.gene52075:CDS | 55.0% |
| !! | TATGGTGGTGGTGGAGGTAG+TGG | + | chr4.1:29981629-29981648 | MS.gene52075:CDS | 55.0% |
| GGAGGTGGAGGTGGTTATGG+AGG | + | chr4.1:29981476-29981495 | MS.gene52075:CDS | 60.0% | |
| GGAGGTGGTTATGGAGGAGG+TGG | + | chr4.1:29981482-29981501 | MS.gene52075:CDS | 60.0% | |
| GGTGGAAGCTGCTACAGCTG+TGG | + | chr4.1:29981653-29981672 | MS.gene52075:CDS | 60.0% | |
| GGTGGAGGTGGAGGTGGTTA+TGG | + | chr4.1:29981371-29981390 | MS.gene52075:CDS | 60.0% | |
| GGTGGAGGTGGTTATGGAGG+AGG | + | chr4.1:29981479-29981498 | MS.gene52075:CDS | 60.0% | |
| GGTGGTTATGGAGGAGGTGG+TGG | + | chr4.1:29981485-29981504 | MS.gene52075:CDS | 60.0% | |
| GTTCAAGGATCGAGACGCGG+AGG | + | chr4.1:29981347-29981366 | MS.gene52075:CDS | 60.0% | |
| ! | AGAGGAGGTGGTGGCTATGG+TGG | + | chr4.1:29981455-29981474 | MS.gene52075:CDS | 60.0% |
| ! | GGAAGAGGAGGTGGTGGCTA+TGG | + | chr4.1:29981452-29981471 | MS.gene52075:CDS | 60.0% |
| ! | GGAGGAGGTGGTGGTTATGG+TGG | + | chr4.1:29981494-29981513 | MS.gene52075:CDS | 60.0% |
| ! | GGAGGTGGTGGTTATGGTGG+TGG | + | chr4.1:29981497-29981516 | MS.gene52075:CDS | 60.0% |
| ! | GGCTATGGTGGAAGAGGAGG+TGG | + | chr4.1:29981443-29981462 | MS.gene52075:CDS | 60.0% |
| ! | GGTGGCTATGGTGGAAGAGG+AGG | + | chr4.1:29981440-29981459 | MS.gene52075:CDS | 60.0% |
| ! | GGTGGTGGCTATGGTGGAAG+AGG | + | chr4.1:29981437-29981456 | MS.gene52075:CDS | 60.0% |
| !! | GGAAGGTATGGTGGTGGTGG+AGG | + | chr4.1:29981623-29981642 | MS.gene52075:CDS | 60.0% |
| !! | GGTGGAAGGTATGGTGGTGG+TGG | + | chr4.1:29981620-29981639 | MS.gene52075:CDS | 60.0% |
| !! | GGTGGTGGTTATGGTGGTGG+TGG | + | chr4.1:29981500-29981519 | MS.gene52075:CDS | 60.0% |
| !! | GGTTACGGTGGTGGCGGTTA+TGG | + | chr4.1:29981407-29981426 | MS.gene52075:CDS | 60.0% |
| !! | GGTTATGGTGGTGGAGGTGG+TGG | + | chr4.1:29981422-29981441 | MS.gene52075:CDS | 60.0% |
| !! | TACGGTGGTGGCGGTTATGG+TGG | + | chr4.1:29981410-29981429 | MS.gene52075:CDS | 60.0% |
| !! | TGGTGGTGGTGGAAGAGGTG+GGG | + | chr4.1:29981511-29981530 | MS.gene52075:CDS | 60.0% |
| ATCCACCACCGCCTCCTCCA+CGG | - | chr4.1:29981538-29981557 | None:intergenic | 65.0% | |
| CAAGGATCGAGACGCGGAGG+CGG | + | chr4.1:29981350-29981369 | MS.gene52075:CDS | 65.0% | |
| GAGTGTACCAGCGGTGGAGG+TGG | + | chr4.1:29981593-29981612 | MS.gene52075:CDS | 65.0% | |
| TGTACCAGCGGTGGAGGTGG+TGG | + | chr4.1:29981596-29981615 | MS.gene52075:CDS | 65.0% | |
| ! | AGGGAGTGTACCAGCGGTGG+AGG | + | chr4.1:29981590-29981609 | MS.gene52075:CDS | 65.0% |
| ! | GCAAGGGAGTGTACCAGCGG+TGG | + | chr4.1:29981587-29981606 | MS.gene52075:CDS | 65.0% |
| ! | GGAGGTGGTGGCTATGGTGG+AGG | + | chr4.1:29981434-29981453 | MS.gene52075:CDS | 65.0% |
| ! | GGCGGTGGAAGGTATGGTGG+TGG | + | chr4.1:29981617-29981636 | MS.gene52075:CDS | 65.0% |
| ! | GGCTATGGTGGAGGTGGAGG+TGG | + | chr4.1:29981467-29981486 | MS.gene52075:CDS | 65.0% |
| ! | GGTGGAGGTGGTGGCTATGG+TGG | + | chr4.1:29981431-29981450 | MS.gene52075:CDS | 65.0% |
| ! | GGTGGCGGTGGAAGGTATGG+TGG | + | chr4.1:29981614-29981633 | MS.gene52075:CDS | 65.0% |
| ! | GGTGGCTATGGTGGAGGTGG+AGG | + | chr4.1:29981464-29981483 | MS.gene52075:CDS | 65.0% |
| ! | GGTGGTGGCTATGGTGGAGG+TGG | + | chr4.1:29981461-29981480 | MS.gene52075:CDS | 65.0% |
| ! | GGTGGTGGTTACGGTGGTGG+CGG | + | chr4.1:29981401-29981420 | MS.gene52075:CDS | 65.0% |
| !! | CGTGGTGGTGGTGGTTACGG+TGG | + | chr4.1:29981395-29981414 | MS.gene52075:CDS | 65.0% |
| !! | GGCGGTTATGGTGGTGGAGG+TGG | + | chr4.1:29981419-29981438 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGCGGTTATGGTGGTGG+AGG | + | chr4.1:29981416-29981435 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGAGGTGGTGGCTA+TGG | + | chr4.1:29981428-29981447 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGCGGTGGAAGGTA+TGG | + | chr4.1:29981611-29981630 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGCGGTTATGGTGG+TGG | + | chr4.1:29981413-29981432 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGTGGAAGAGGTGG+GGG | + | chr4.1:29981512-29981531 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGTGGAGGTAGTGG+CGG | + | chr4.1:29981632-29981651 | MS.gene52075:CDS | 65.0% |
| !! | GGTGGTGGTGGTTACGGTGG+TGG | + | chr4.1:29981398-29981417 | MS.gene52075:CDS | 65.0% |
| ! | ACCAGCGGTGGAGGTGGTGG+CGG | + | chr4.1:29981599-29981618 | MS.gene52075:CDS | 70.0% |
| !! | GGTGGTGGAGGTAGTGGCGG+TGG | + | chr4.1:29981635-29981654 | MS.gene52075:CDS | 70.0% |
| !! | GTGGAGGTGGTGGCGGTGGA+AGG | + | chr4.1:29981606-29981625 | MS.gene52075:CDS | 70.0% |
| ACCGCCACCACCTCCACCGC+TGG | - | chr4.1:29981603-29981622 | None:intergenic | 75.0% | |
| AGACGCGGAGGCGGTGGAGG+TGG | + | chr4.1:29981359-29981378 | MS.gene52075:CDS | 75.0% | |
| AGAGGTGGGGGCCGTGGAGG+AGG | + | chr4.1:29981524-29981543 | MS.gene52075:CDS | 75.0% | |
| GGAAGAGGTGGGGGCCGTGG+AGG | + | chr4.1:29981521-29981540 | MS.gene52075:CDS | 75.0% | |
| GGAGGCGGTGGAGGTGGAGG+TGG | + | chr4.1:29981365-29981384 | MS.gene52075:CDS | 75.0% | |
| GGATCGAGACGCGGAGGCGG+TGG | + | chr4.1:29981353-29981372 | MS.gene52075:CDS | 75.0% | |
| GGTGGAAGAGGTGGGGGCCG+TGG | + | chr4.1:29981518-29981537 | MS.gene52075:CDS | 75.0% | |
| TCGAGACGCGGAGGCGGTGG+AGG | + | chr4.1:29981356-29981375 | MS.gene52075:CDS | 75.0% | |
| !! | AGCGGTGGAGGTGGTGGCGG+TGG | + | chr4.1:29981602-29981621 | MS.gene52075:CDS | 75.0% |
| ! | CGCGGAGGCGGTGGAGGTGG+AGG | + | chr4.1:29981362-29981381 | MS.gene52075:CDS | 80.0% |
| ! | GGCCGTGGAGGAGGCGGTGG+TGG | + | chr4.1:29981533-29981552 | MS.gene52075:CDS | 80.0% |
| ! | GGTGGGGGCCGTGGAGGAGG+CGG | + | chr4.1:29981527-29981546 | MS.gene52075:CDS | 80.0% |
| ! | GGGGGCCGTGGAGGAGGCGG+TGG | + | chr4.1:29981530-29981549 | MS.gene52075:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29981119 | 29981724 | 29981119 | ID=MS.gene52075 |
| chr4.1 | mRNA | 29981119 | 29981724 | 29981119 | ID=MS.gene52075.t1;Parent=MS.gene52075 |
| chr4.1 | exon | 29981119 | 29981724 | 29981119 | ID=MS.gene52075.t1.exon1;Parent=MS.gene52075.t1 |
| chr4.1 | CDS | 29981119 | 29981724 | 29981119 | ID=cds.MS.gene52075.t1;Parent=MS.gene52075.t1 |
| Gene Sequence |
| Protein sequence |
