Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57685.t1 | XP_013444929.1 | 95 | 382 | 19 | 0 | 1 | 382 | 1 | 382 | 7.70E-215 | 756.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57685.t1 | Q9FVQ0 | 55.6 | 376 | 167 | 0 | 3 | 378 | 2 | 377 | 4.2e-121 | 436.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57685.t1 | A0A072TN89 | 95.0 | 382 | 19 | 0 | 1 | 382 | 1 | 382 | 5.5e-215 | 756.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56048 | MS.gene57685 | PPI |
| MS.gene24021 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene015953 | PPI |
| MS.gene059027 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene064951 | PPI |
| MS.gene23537 | MS.gene57685 | PPI |
| MS.gene51580 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene018590 | PPI |
| MS.gene61665 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene059136 | PPI |
| MS.gene94810 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene09884 | PPI |
| MS.gene57685 | MS.gene32792 | PPI |
| MS.gene57685 | MS.gene40340 | PPI |
| MS.gene57685 | MS.gene021474 | PPI |
| MS.gene57685 | MS.gene53594 | PPI |
| MS.gene57685 | MS.gene038029 | PPI |
| MS.gene57685 | MS.gene014685 | PPI |
| MS.gene57685 | MS.gene061851 | PPI |
| MS.gene57685 | MS.gene31616 | PPI |
| MS.gene031178 | MS.gene57685 | PPI |
| MS.gene64265 | MS.gene57685 | PPI |
| MS.gene57685 | MS.gene60245 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57685.t1 | MTR_8g432640 | 95.026 | 382 | 19 | 0 | 1 | 382 | 1 | 382 | 0.0 | 758 |
| MS.gene57685.t1 | MTR_5g033260 | 84.293 | 382 | 60 | 0 | 1 | 382 | 1 | 382 | 0.0 | 674 |
| MS.gene57685.t1 | MTR_3g088925 | 51.323 | 378 | 182 | 2 | 3 | 379 | 4 | 380 | 1.92e-140 | 405 |
| MS.gene57685.t1 | MTR_3g088945 | 50.794 | 378 | 184 | 2 | 3 | 379 | 4 | 380 | 4.08e-139 | 402 |
| MS.gene57685.t1 | MTR_7g107690 | 50.000 | 376 | 185 | 1 | 6 | 378 | 8 | 383 | 4.22e-139 | 401 |
| MS.gene57685.t1 | MTR_3g088955 | 50.265 | 378 | 186 | 2 | 3 | 379 | 4 | 380 | 6.99e-137 | 396 |
| MS.gene57685.t1 | MTR_4g051642 | 51.587 | 378 | 180 | 3 | 3 | 379 | 4 | 379 | 2.64e-136 | 395 |
| MS.gene57685.t1 | MTR_7g107710 | 49.067 | 375 | 189 | 2 | 1 | 374 | 1 | 374 | 1.06e-130 | 380 |
| MS.gene57685.t1 | MTR_3g109520 | 46.113 | 373 | 195 | 2 | 7 | 374 | 40 | 411 | 2.48e-122 | 360 |
| MS.gene57685.t1 | MTR_1g069275 | 47.872 | 376 | 186 | 5 | 7 | 376 | 26 | 397 | 7.05e-122 | 359 |
| MS.gene57685.t1 | MTR_1g011630 | 45.745 | 376 | 193 | 4 | 7 | 377 | 17 | 386 | 1.73e-116 | 345 |
| MS.gene57685.t1 | MTR_6g086870 | 44.063 | 379 | 203 | 3 | 7 | 377 | 21 | 398 | 2.85e-116 | 344 |
| MS.gene57685.t1 | MTR_7g099330 | 46.543 | 376 | 187 | 5 | 7 | 376 | 25 | 392 | 1.14e-115 | 343 |
| MS.gene57685.t1 | MTR_1g008380 | 44.000 | 375 | 203 | 3 | 7 | 376 | 43 | 415 | 2.21e-114 | 340 |
| MS.gene57685.t1 | MTR_1g046230 | 44.386 | 383 | 204 | 5 | 7 | 382 | 25 | 405 | 5.30e-114 | 339 |
| MS.gene57685.t1 | MTR_3g096030 | 68.681 | 182 | 33 | 1 | 1 | 182 | 1 | 158 | 2.17e-83 | 251 |
| MS.gene57685.t1 | MTR_7g099160 | 44.262 | 305 | 156 | 5 | 78 | 376 | 217 | 513 | 3.64e-80 | 255 |
| MS.gene57685.t1 | MTR_3g096020 | 53.097 | 113 | 15 | 3 | 212 | 323 | 1 | 76 | 2.63e-22 | 99.0 |
| MS.gene57685.t1 | MTR_8g037910 | 23.923 | 209 | 133 | 4 | 6 | 190 | 4 | 210 | 1.28e-11 | 65.1 |
| MS.gene57685.t1 | MTR_8g037910 | 23.923 | 209 | 133 | 4 | 6 | 190 | 4 | 210 | 1.75e-11 | 65.1 |
| MS.gene57685.t1 | MTR_8g037910 | 23.923 | 209 | 133 | 4 | 6 | 190 | 4 | 210 | 2.71e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57685.t1 | AT1G48910 | 55.438 | 377 | 168 | 0 | 2 | 378 | 1 | 377 | 2.48e-154 | 440 |
| MS.gene57685.t1 | AT1G21430 | 50.134 | 373 | 181 | 4 | 6 | 376 | 9 | 378 | 8.86e-130 | 378 |
| MS.gene57685.t1 | AT5G11320 | 47.059 | 374 | 185 | 4 | 7 | 375 | 18 | 383 | 5.17e-122 | 359 |
| MS.gene57685.t1 | AT5G25620 | 46.154 | 377 | 193 | 5 | 7 | 376 | 33 | 406 | 2.02e-120 | 355 |
| MS.gene57685.t1 | AT5G25620 | 46.154 | 377 | 193 | 5 | 7 | 376 | 33 | 406 | 6.54e-120 | 354 |
| MS.gene57685.t1 | AT1G04610 | 47.074 | 376 | 189 | 5 | 7 | 374 | 38 | 411 | 2.09e-119 | 353 |
| MS.gene57685.t1 | AT4G13260 | 45.989 | 374 | 196 | 2 | 7 | 375 | 29 | 401 | 3.34e-118 | 349 |
| MS.gene57685.t1 | AT4G32540 | 45.503 | 378 | 193 | 5 | 7 | 377 | 22 | 393 | 1.22e-117 | 348 |
| MS.gene57685.t1 | AT4G32540 | 45.358 | 377 | 193 | 5 | 7 | 377 | 22 | 391 | 1.47e-117 | 348 |
| MS.gene57685.t1 | AT1G04180 | 45.989 | 374 | 192 | 5 | 7 | 374 | 26 | 395 | 2.28e-114 | 340 |
| MS.gene57685.t1 | AT4G28720 | 44.216 | 389 | 197 | 6 | 7 | 382 | 26 | 407 | 4.81e-114 | 339 |
| MS.gene57685.t1 | AT5G43890 | 45.067 | 375 | 197 | 5 | 7 | 374 | 26 | 398 | 1.54e-112 | 335 |
| MS.gene57685.t1 | AT2G33230 | 44.415 | 376 | 198 | 5 | 7 | 374 | 33 | 405 | 1.18e-106 | 320 |
| MS.gene57685.t1 | AT5G11320 | 46.749 | 323 | 160 | 3 | 7 | 324 | 18 | 333 | 2.10e-103 | 310 |
| MS.gene57685.t1 | AT4G13260 | 47.518 | 282 | 143 | 1 | 7 | 283 | 29 | 310 | 2.91e-93 | 282 |
| MS.gene57685.t1 | AT4G13260 | 42.414 | 290 | 161 | 2 | 90 | 374 | 9 | 297 | 6.98e-76 | 238 |
| MS.gene57685.t1 | AT1G62560 | 25.822 | 213 | 129 | 4 | 6 | 190 | 13 | 224 | 1.99e-13 | 71.6 |
| MS.gene57685.t1 | AT1G62560 | 25.822 | 213 | 129 | 4 | 6 | 190 | 13 | 224 | 2.29e-13 | 71.6 |
Find 91 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTATGTAGATTAAGATTT+TGG | 0.179244 | 8.3:+61695918 | None:intergenic |
| TTGCTTATGACCTCCATAAT+TGG | 0.183962 | 8.3:-61697612 | MS.gene57685:CDS |
| TCGGCATCCCTTTGTCATTA+AGG | 0.262319 | 8.3:+61696056 | None:intergenic |
| TACGGTGATCTGTCTGAATA+TGG | 0.271286 | 8.3:-61697033 | MS.gene57685:CDS |
| ATTGTAGGTGCTGGTCCTTC+TGG | 0.274701 | 8.3:-61698147 | MS.gene57685:CDS |
| GGATACATACATTACTCTTT+TGG | 0.299211 | 8.3:-61697067 | MS.gene57685:CDS |
| AAGATTGTTGTGCTTCTCTT+TGG | 0.300111 | 8.3:-61698065 | MS.gene57685:CDS |
| GTATTGAAGGAATTGGTCTT+TGG | 0.306079 | 8.3:+61697945 | None:intergenic |
| AAGGGCTAGCACCCCAATTA+TGG | 0.312016 | 8.3:+61697599 | None:intergenic |
| CGGCATCCCTTTGTCATTAA+GGG | 0.318277 | 8.3:+61696057 | None:intergenic |
| GACTTGCAAGGAGAGGCTTA+TGG | 0.330544 | 8.3:-61695982 | MS.gene57685:CDS |
| GAGATGTAGAGGTCCTTCTT+TGG | 0.339757 | 8.3:+61696999 | None:intergenic |
| TGCTTATGACCTCCATAATT+GGG | 0.343385 | 8.3:-61697611 | MS.gene57685:CDS |
| AGATGTAGAGGTCCTTCTTT+GGG | 0.350821 | 8.3:+61697000 | None:intergenic |
| GATCAAGGAGGGAGCTATAA+AGG | 0.356826 | 8.3:-61696926 | MS.gene57685:intron |
| GAATTCACAGTTGTAATTGT+AGG | 0.358463 | 8.3:-61698162 | MS.gene57685:CDS |
| CGGAGGGTGGGTGAGGCATG+AGG | 0.359688 | 8.3:+61697983 | None:intergenic |
| TGTCTATGTATTGAAGGAAT+TGG | 0.360875 | 8.3:+61697938 | None:intergenic |
| TTTCCTAGTCCAGGCACATT+AGG | 0.363187 | 8.3:+61697736 | None:intergenic |
| CACTCTAAATACTACAAATC+TGG | 0.382747 | 8.3:-61697694 | MS.gene57685:CDS |
| ACTTGCAAGGAGAGGCTTAT+GGG | 0.385972 | 8.3:-61695981 | MS.gene57685:CDS |
| TGATCGTTTAAATCTCCATT+TGG | 0.407831 | 8.3:-61698028 | MS.gene57685:CDS |
| CATATTTGTCTATGTATTGA+AGG | 0.420134 | 8.3:+61697932 | None:intergenic |
| TTCCATTGTCATTCGAAGTC+CGG | 0.430209 | 8.3:-61697578 | MS.gene57685:intron |
| CGTAGCTGCATGTCTTCACT+AGG | 0.443249 | 8.3:-61697143 | MS.gene57685:intron |
| ATTCCTAATGTGCCTGGACT+AGG | 0.444869 | 8.3:-61697739 | MS.gene57685:CDS |
| GTTATTGATGTTGGAACCAT+TGG | 0.446645 | 8.3:-61696952 | MS.gene57685:CDS |
| GGCTACAAAAGCATAGCTAA+TGG | 0.456499 | 8.3:-61696491 | MS.gene57685:CDS |
| AGGTATGTTGGTCCGGAGGG+TGG | 0.458769 | 8.3:+61697970 | None:intergenic |
| TATGTATCCACAACATGAAC+CGG | 0.459362 | 8.3:+61697081 | None:intergenic |
| GTTGGTCCGGAGGGTGGGTG+AGG | 0.464453 | 8.3:+61697976 | None:intergenic |
| CCTTCAAAATTTCCTAGTCC+AGG | 0.465030 | 8.3:+61697727 | None:intergenic |
| GCGCATGGTGAAGTATTTGC+CGG | 0.467106 | 8.3:-61697100 | MS.gene57685:CDS |
| TCCCTCCTTGATCTTTCCAA+TGG | 0.479573 | 8.3:+61696936 | None:intergenic |
| TTTGGATAGGTATGTTGGTC+CGG | 0.481867 | 8.3:+61697963 | None:intergenic |
| GAAGGAATTGGTCTTTGGAT+AGG | 0.482572 | 8.3:+61697950 | None:intergenic |
| GAGGGTGGGTGAGGCATGAG+GGG | 0.483319 | 8.3:+61697985 | None:intergenic |
| TCGATTCTCTTTATATTCGA+AGG | 0.485041 | 8.3:+61696578 | None:intergenic |
| AGCAAAACTCACTAGCCAAA+TGG | 0.488038 | 8.3:+61698013 | None:intergenic |
| GGTTATATTCCTAATGTGCC+TGG | 0.488785 | 8.3:-61697745 | MS.gene57685:CDS |
| CACCGGAGGCAATCACAAGA+TGG | 0.492798 | 8.3:+61697779 | None:intergenic |
| CTCATGCCTCACCCACCCTC+CGG | 0.492928 | 8.3:-61697982 | MS.gene57685:CDS |
| TGGTCTTTGGATAGGTATGT+TGG | 0.498598 | 8.3:+61697958 | None:intergenic |
| GGAATTTATCGTCCCAAAGA+AGG | 0.502589 | 8.3:-61697012 | MS.gene57685:CDS |
| ATGATGAAGTTAGAAACAAA+TGG | 0.503942 | 8.3:-61697855 | MS.gene57685:CDS |
| ACAGTTGTAATTGTAGGTGC+TGG | 0.504959 | 8.3:-61698156 | MS.gene57685:CDS |
| AACCATCTTGTGATTGCCTC+CGG | 0.507043 | 8.3:-61697781 | MS.gene57685:CDS |
| GGAGGGTGGGTGAGGCATGA+GGG | 0.511610 | 8.3:+61697984 | None:intergenic |
| GGTATGTTGGTCCGGAGGGT+GGG | 0.511702 | 8.3:+61697971 | None:intergenic |
| ACTTCACCATGCGCATCCCT+TGG | 0.513625 | 8.3:+61697109 | None:intergenic |
| AAAATGCTTTCCCAAAGCAT+TGG | 0.514155 | 8.3:-61696033 | MS.gene57685:CDS |
| GATCATGGATTGTATTGTGC+AGG | 0.514647 | 8.3:-61696004 | MS.gene57685:CDS |
| TTCGAGTATGATATGAGAGA+TGG | 0.516881 | 8.3:+61698092 | None:intergenic |
| AATATGCCCTTAATGACAAA+GGG | 0.522026 | 8.3:-61696063 | MS.gene57685:CDS |
| AAGTCTGCCGTTATTGATGT+TGG | 0.523041 | 8.3:-61696961 | MS.gene57685:CDS |
| TGCTTTCCCAAAGCATTGGA+AGG | 0.523788 | 8.3:-61696029 | MS.gene57685:CDS |
| AAATATGCCCTTAATGACAA+AGG | 0.540888 | 8.3:-61696064 | MS.gene57685:CDS |
| GATAGGTATGTTGGTCCGGA+GGG | 0.542390 | 8.3:+61697967 | None:intergenic |
| GTATTTGCCGGTTCATGTTG+TGG | 0.548316 | 8.3:-61697088 | MS.gene57685:CDS |
| GTAGTCGGGTGTGGCAACTC+AGG | 0.551766 | 8.3:-61697643 | MS.gene57685:CDS |
| ATGAAGTTAGAAACAAATGG+AGG | 0.562153 | 8.3:-61697852 | MS.gene57685:CDS |
| GGACTTCGAATGACAATGGA+AGG | 0.562326 | 8.3:+61697580 | None:intergenic |
| TGGAACCATTGGAAAGATCA+AGG | 0.562660 | 8.3:-61696941 | MS.gene57685:CDS |
| TTAGACAAGCTGAAATTGCT+AGG | 0.565568 | 8.3:+61698124 | None:intergenic |
| AATGGTTCCAACATCAATAA+CGG | 0.565677 | 8.3:+61696954 | None:intergenic |
| GGATAGGTATGTTGGTCCGG+AGG | 0.572324 | 8.3:+61697966 | None:intergenic |
| CTTTCCCAAAGCATTGGAAG+GGG | 0.573417 | 8.3:-61696027 | MS.gene57685:CDS |
| GCTGAAATTGCTAGGCCAGA+AGG | 0.573450 | 8.3:+61698132 | None:intergenic |
| GCTTTCCCAAAGCATTGGAA+GGG | 0.574719 | 8.3:-61696028 | MS.gene57685:CDS |
| TGTATTGTGCAGGACTTGCA+AGG | 0.577420 | 8.3:-61695994 | MS.gene57685:CDS |
| CATAGCTAATGGATGGCTCA+AGG | 0.586622 | 8.3:-61696480 | MS.gene57685:intron |
| AGGCTTATGGGGAGTCAAAG+TGG | 0.586979 | 8.3:-61695969 | MS.gene57685:CDS |
| CTTGCAAGGAGAGGCTTATG+GGG | 0.592864 | 8.3:-61695980 | MS.gene57685:CDS |
| GCTTATGACCTCCATAATTG+GGG | 0.603166 | 8.3:-61697610 | MS.gene57685:CDS |
| ACCATTGGAAAGATCAAGGA+GGG | 0.604099 | 8.3:-61696937 | MS.gene57685:CDS |
| ACAAAAGCATAGCTAATGGA+TGG | 0.606759 | 8.3:-61696487 | MS.gene57685:CDS |
| TACCGGACTTCGAATGACAA+TGG | 0.611458 | 8.3:+61697576 | None:intergenic |
| TGTGCAGGACTTGCAAGGAG+AGG | 0.620346 | 8.3:-61695989 | MS.gene57685:CDS |
| CTAGGGAAATGATTCACCAA+GGG | 0.627746 | 8.3:-61697125 | MS.gene57685:CDS |
| GAACACACAAGATGACACAT+TGG | 0.629327 | 8.3:-61697818 | MS.gene57685:CDS |
| GCCTCCGGTGAAAATAGTGA+AGG | 0.640492 | 8.3:-61697766 | MS.gene57685:CDS |
| AAAACCTCGCTATTGTCGCA+TGG | 0.641601 | 8.3:-61697893 | MS.gene57685:CDS |
| TGAAGTTAGAAACAAATGGA+GGG | 0.648539 | 8.3:-61697851 | MS.gene57685:CDS |
| TTTCCCAAAGCATTGGAAGG+GGG | 0.650710 | 8.3:-61696026 | MS.gene57685:CDS |
| GTAGCTGCATGTCTTCACTA+GGG | 0.655762 | 8.3:-61697142 | MS.gene57685:intron |
| GGCTAGCACCCCAATTATGG+AGG | 0.656485 | 8.3:+61697602 | None:intergenic |
| TCGACCATGCGACAATAGCG+AGG | 0.657827 | 8.3:+61697889 | None:intergenic |
| ACTAGGGAAATGATTCACCA+AGG | 0.660715 | 8.3:-61697126 | MS.gene57685:CDS |
| GATTCACCAAGGGATGCGCA+TGG | 0.671019 | 8.3:-61697115 | MS.gene57685:CDS |
| GACTTCGAATGACAATGGAA+GGG | 0.705434 | 8.3:+61697581 | None:intergenic |
| AACCATTGGAAAGATCAAGG+AGG | 0.739557 | 8.3:-61696938 | MS.gene57685:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAGTTAAACTAAA+AGG | + | chr8.3:61697414-61697433 | None:intergenic | 10.0% |
| !! | CTTATTATTAATTTACAATT+AGG | + | chr8.3:61697964-61697983 | None:intergenic | 10.0% |
| !!! | AGCATTATATAAAATAATTT+TGG | - | chr8.3:61697462-61697481 | MS.gene57685:intron | 10.0% |
| !!! | GCATTATATAAAATAATTTT+GGG | - | chr8.3:61697463-61697482 | MS.gene57685:intron | 10.0% |
| !! | AACTCAAAACTATAAATATA+AGG | + | chr8.3:61697769-61697788 | None:intergenic | 15.0% |
| !! | GTATAAATTTATACTTCATT+TGG | + | chr8.3:61697392-61697411 | None:intergenic | 15.0% |
| !!! | AGTTAAAAAAAAGTTTTTAC+CGG | + | chr8.3:61696528-61696547 | None:intergenic | 15.0% |
| !!! | ATATAAAATAATTTTGGGTT+TGG | - | chr8.3:61697468-61697487 | MS.gene57685:intron | 15.0% |
| !!! | CAAACAAAAAAAAAACTTTT+TGG | + | chr8.3:61697360-61697379 | None:intergenic | 15.0% |
| !!! | CTAAATACATTTTATATTCA+AGG | - | chr8.3:61697331-61697350 | MS.gene57685:intron | 15.0% |
| !!! | TTATGTGTAAAATTTTACAT+AGG | - | chr8.3:61696835-61696854 | MS.gene57685:intron | 15.0% |
| !! | AAATTCTTTACAAACTAGTT+CGG | - | chr8.3:61697863-61697882 | MS.gene57685:CDS | 20.0% |
| !! | CATTCAATATCTAATGTATT+TGG | - | chr8.3:61697296-61697315 | MS.gene57685:intron | 20.0% |
| !!! | AGTTATGTAGATTAAGATTT+TGG | + | chr8.3:61698169-61698188 | None:intergenic | 20.0% |
| !!! | ATACGAATCAAAAAAAGTTT+TGG | - | chr8.3:61696419-61696438 | MS.gene57685:intron | 20.0% |
| !!! | TTTTTGCTTATAAATGTGAT+CGG | + | chr8.3:61697261-61697280 | None:intergenic | 20.0% |
| ! | AAAAAGAACAAAAGTTTACG+TGG | + | chr8.3:61697916-61697935 | None:intergenic | 25.0% |
| ! | AAAAGAACAAAAGTTTACGT+GGG | + | chr8.3:61697915-61697934 | None:intergenic | 25.0% |
| ! | ATGAAAAAATACGTGAGTAT+TGG | - | chr8.3:61696897-61696916 | MS.gene57685:intron | 25.0% |
| ! | ATGATGAAGTTAGAAACAAA+TGG | - | chr8.3:61696229-61696248 | MS.gene57685:intron | 25.0% |
| ! | CATATTTGTCTATGTATTGA+AGG | + | chr8.3:61696155-61696174 | None:intergenic | 25.0% |
| ! | CTACATCTCAAAAATATTAC+AGG | - | chr8.3:61697099-61697118 | MS.gene57685:CDS | 25.0% |
| ! | GATCAAATTAGCAATAAGAT+TGG | + | chr8.3:61697691-61697710 | None:intergenic | 25.0% |
| ! | GTATAAGAAATAAAGTCCAA+AGG | + | chr8.3:61697940-61697959 | None:intergenic | 25.0% |
| ! | TCTATATTTCTCTTCATCTA+TGG | + | chr8.3:61697657-61697676 | None:intergenic | 25.0% |
| ! | TGAAAATGAAGAAGATAAGA+AGG | - | chr8.3:61697793-61697812 | MS.gene57685:CDS | 25.0% |
| !! | ACTTTTGTTCTTTTTTCCTT+TGG | - | chr8.3:61697921-61697940 | MS.gene57685:CDS | 25.0% |
| !!! | CTTTTGGCTAAACTAAAATA+CGG | - | chr8.3:61697033-61697052 | MS.gene57685:CDS | 25.0% |
| !!! | GTAATATTTTTGAGATGTAG+AGG | + | chr8.3:61697099-61697118 | None:intergenic | 25.0% |
| !!! | TCAAAAAAAGTTTTGGTAGT+CGG | - | chr8.3:61696426-61696445 | MS.gene57685:intron | 25.0% |
| !!! | TTGATATGTGTCTTTTTTGA+AGG | - | chr8.3:61697992-61698011 | MS.gene57685:CDS | 25.0% |
| AAACTAGTTCGGATAAATGA+AGG | - | chr8.3:61697874-61697893 | MS.gene57685:CDS | 30.0% | |
| AAATATGCCCTTAATGACAA+AGG | - | chr8.3:61698020-61698039 | MS.gene57685:CDS | 30.0% | |
| AATATGCCCTTAATGACAAA+GGG | - | chr8.3:61698021-61698040 | MS.gene57685:CDS | 30.0% | |
| AATGGTTCCAACATCAATAA+CGG | + | chr8.3:61697133-61697152 | None:intergenic | 30.0% | |
| ACCAAATAATAACGATGCAA+TGG | + | chr8.3:61696809-61696828 | None:intergenic | 30.0% | |
| AGTCAACTTAGTCTATATTC+TGG | + | chr8.3:61696773-61696792 | None:intergenic | 30.0% | |
| ATGAAGTTAGAAACAAATGG+AGG | - | chr8.3:61696232-61696251 | MS.gene57685:intron | 30.0% | |
| CAAATAATAACGATGCAATG+GGG | + | chr8.3:61696807-61696826 | None:intergenic | 30.0% | |
| CACTCTAAATACTACAAATC+TGG | - | chr8.3:61696390-61696409 | MS.gene57685:intron | 30.0% | |
| CCAAATAATAACGATGCAAT+GGG | + | chr8.3:61696808-61696827 | None:intergenic | 30.0% | |
| GAATTCACAGTTGTAATTGT+AGG | - | chr8.3:61695922-61695941 | MS.gene57685:CDS | 30.0% | |
| GTCAACTTAGTCTATATTCT+GGG | + | chr8.3:61696772-61696791 | None:intergenic | 30.0% | |
| TCGATTCTCTTTATATTCGA+AGG | + | chr8.3:61697509-61697528 | None:intergenic | 30.0% | |
| TGAAGTTAGAAACAAATGGA+GGG | - | chr8.3:61696233-61696252 | MS.gene57685:intron | 30.0% | |
| TGATCGTTTAAATCTCCATT+TGG | - | chr8.3:61696056-61696075 | MS.gene57685:CDS | 30.0% | |
| TGTCTATGTATTGAAGGAAT+TGG | + | chr8.3:61696149-61696168 | None:intergenic | 30.0% | |
| ! | AGTAAAAAGTGCATGTCAAT+TGG | + | chr8.3:61696747-61696766 | None:intergenic | 30.0% |
| ! | ATAACCTTCACTATTTTCAC+CGG | + | chr8.3:61696325-61696344 | None:intergenic | 30.0% |
| ! | CATGTTTAAAGTAACTCATC+AGG | + | chr8.3:61696615-61696634 | None:intergenic | 30.0% |
| ! | GGATACATACATTACTCTTT+TGG | - | chr8.3:61697017-61697036 | MS.gene57685:CDS | 30.0% |
| !! | CAAAAAAAGTTTTGGTAGTC+GGG | - | chr8.3:61696427-61696446 | MS.gene57685:intron | 30.0% |
| AAAATGCTTTCCCAAAGCAT+TGG | - | chr8.3:61698051-61698070 | MS.gene57685:CDS | 35.0% | |
| AAGATTGTTGTGCTTCTCTT+TGG | - | chr8.3:61696019-61696038 | MS.gene57685:CDS | 35.0% | |
| CAAGTGGATGTGCAAAAAAT+GGG | + | chr8.3:61696589-61696608 | None:intergenic | 35.0% | |
| CCCATTGCATCGTTATTATT+TGG | - | chr8.3:61696805-61696824 | MS.gene57685:intron | 35.0% | |
| GTTATTGATGTTGGAACCAT+TGG | - | chr8.3:61697132-61697151 | MS.gene57685:CDS | 35.0% | |
| TATGTATCCACAACATGAAC+CGG | + | chr8.3:61697006-61697025 | None:intergenic | 35.0% | |
| TCAAGTGGATGTGCAAAAAA+TGG | + | chr8.3:61696590-61696609 | None:intergenic | 35.0% | |
| TGCTTATGACCTCCATAATT+GGG | - | chr8.3:61696473-61696492 | MS.gene57685:intron | 35.0% | |
| TTAGACAAGCTGAAATTGCT+AGG | + | chr8.3:61695963-61695982 | None:intergenic | 35.0% | |
| TTATATTCGAAGGAACAACC+TGG | + | chr8.3:61697499-61697518 | None:intergenic | 35.0% | |
| TTCGAGTATGATATGAGAGA+TGG | + | chr8.3:61695995-61696014 | None:intergenic | 35.0% | |
| TTGCTTATGACCTCCATAAT+TGG | - | chr8.3:61696472-61696491 | MS.gene57685:intron | 35.0% | |
| ! | ACAAAAGCATAGCTAATGGA+TGG | - | chr8.3:61697597-61697616 | MS.gene57685:CDS | 35.0% |
| ! | ATTAGCTATGCTTTTGTAGC+CGG | + | chr8.3:61697594-61697613 | None:intergenic | 35.0% |
| !! | GTATTGAAGGAATTGGTCTT+TGG | + | chr8.3:61696142-61696161 | None:intergenic | 35.0% |
| !!! | TGCTTTGGGAAAGCATTTTT+CGG | + | chr8.3:61698050-61698069 | None:intergenic | 35.0% |
| AACCATTGGAAAGATCAAGG+AGG | - | chr8.3:61697146-61697165 | MS.gene57685:intron | 40.0% | |
| AAGTCTGCCGTTATTGATGT+TGG | - | chr8.3:61697123-61697142 | MS.gene57685:CDS | 40.0% | |
| ACAGTTGTAATTGTAGGTGC+TGG | - | chr8.3:61695928-61695947 | MS.gene57685:CDS | 40.0% | |
| ACCATTGGAAAGATCAAGGA+GGG | - | chr8.3:61697147-61697166 | MS.gene57685:intron | 40.0% | |
| ACTAGGGAAATGATTCACCA+AGG | - | chr8.3:61696958-61696977 | MS.gene57685:CDS | 40.0% | |
| AGAACAAAAGTTTACGTGGG+AGG | + | chr8.3:61697912-61697931 | None:intergenic | 40.0% | |
| AGATGTAGAGGTCCTTCTTT+GGG | + | chr8.3:61697087-61697106 | None:intergenic | 40.0% | |
| AGCAAAACTCACTAGCCAAA+TGG | + | chr8.3:61696074-61696093 | None:intergenic | 40.0% | |
| CCTTCAAAATTTCCTAGTCC+AGG | + | chr8.3:61696360-61696379 | None:intergenic | 40.0% | |
| CTAGGGAAATGATTCACCAA+GGG | - | chr8.3:61696959-61696978 | MS.gene57685:CDS | 40.0% | |
| GAACACACAAGATGACACAT+TGG | - | chr8.3:61696266-61696285 | MS.gene57685:intron | 40.0% | |
| GACTTCGAATGACAATGGAA+GGG | + | chr8.3:61696506-61696525 | None:intergenic | 40.0% | |
| GCTTATGACCTCCATAATTG+GGG | - | chr8.3:61696474-61696493 | MS.gene57685:intron | 40.0% | |
| GGAATTTATCGTCCCAAAGA+AGG | - | chr8.3:61697072-61697091 | MS.gene57685:CDS | 40.0% | |
| GGTTATATTCCTAATGTGCC+TGG | - | chr8.3:61696339-61696358 | MS.gene57685:intron | 40.0% | |
| TACGGTGATCTGTCTGAATA+TGG | - | chr8.3:61697051-61697070 | MS.gene57685:CDS | 40.0% | |
| TGGAACCATTGGAAAGATCA+AGG | - | chr8.3:61697143-61697162 | MS.gene57685:intron | 40.0% | |
| TGGTCTTTGGATAGGTATGT+TGG | + | chr8.3:61696129-61696148 | None:intergenic | 40.0% | |
| TTCCATTGTCATTCGAAGTC+CGG | - | chr8.3:61696506-61696525 | MS.gene57685:CDS | 40.0% | |
| TTTGGATAGGTATGTTGGTC+CGG | + | chr8.3:61696124-61696143 | None:intergenic | 40.0% | |
| ! | GATCATGGATTGTATTGTGC+AGG | - | chr8.3:61698080-61698099 | MS.gene57685:CDS | 40.0% |
| ! | GGCTACAAAAGCATAGCTAA+TGG | - | chr8.3:61697593-61697612 | MS.gene57685:CDS | 40.0% |
| !! | CCTGGACTAGGAAATTTTGA+AGG | - | chr8.3:61696357-61696376 | MS.gene57685:intron | 40.0% |
| !! | GAAGGAATTGGTCTTTGGAT+AGG | + | chr8.3:61696137-61696156 | None:intergenic | 40.0% |
| !!! | ATTTTGGGTTTGGATGTACC+AGG | - | chr8.3:61697478-61697497 | MS.gene57685:intron | 40.0% |
| !!! | GATGCGATTGTTTTTGCTAC+CGG | - | chr8.3:61697572-61697591 | MS.gene57685:intron | 40.0% |
| AAAACCTCGCTATTGTCGCA+TGG | - | chr8.3:61696191-61696210 | MS.gene57685:intron | 45.0% | |
| AACCATCTTGTGATTGCCTC+CGG | - | chr8.3:61696303-61696322 | MS.gene57685:intron | 45.0% | |
| ACTTGCAAGGAGAGGCTTAT+GGG | - | chr8.3:61698103-61698122 | MS.gene57685:CDS | 45.0% | |
| ATTCCTAATGTGCCTGGACT+AGG | - | chr8.3:61696345-61696364 | MS.gene57685:intron | 45.0% | |
| CGGCATCCCTTTGTCATTAA+GGG | + | chr8.3:61698030-61698049 | None:intergenic | 45.0% | |
| CTAGTGAAGACATGCAGCTA+CGG | + | chr8.3:61696943-61696962 | None:intergenic | 45.0% | |
| GAGATGTAGAGGTCCTTCTT+TGG | + | chr8.3:61697088-61697107 | None:intergenic | 45.0% | |
| GATCAAGGAGGGAGCTATAA+AGG | - | chr8.3:61697158-61697177 | MS.gene57685:intron | 45.0% | |
| GGACTTCGAATGACAATGGA+AGG | + | chr8.3:61696507-61696526 | None:intergenic | 45.0% | |
| GTAACTCATCAGGTGTCAAG+TGG | + | chr8.3:61696605-61696624 | None:intergenic | 45.0% | |
| GTAGCTGCATGTCTTCACTA+GGG | - | chr8.3:61696942-61696961 | MS.gene57685:CDS | 45.0% | |
| TACCGGACTTCGAATGACAA+TGG | + | chr8.3:61696511-61696530 | None:intergenic | 45.0% | |
| TCCCTCCTTGATCTTTCCAA+TGG | + | chr8.3:61697151-61697170 | None:intergenic | 45.0% | |
| TCGGCATCCCTTTGTCATTA+AGG | + | chr8.3:61698031-61698050 | None:intergenic | 45.0% | |
| TGTATTGTGCAGGACTTGCA+AGG | - | chr8.3:61698090-61698109 | MS.gene57685:CDS | 45.0% | |
| TTTCCTAGTCCAGGCACATT+AGG | + | chr8.3:61696351-61696370 | None:intergenic | 45.0% | |
| ! | ACCTTCACTATTTTCACCGG+AGG | + | chr8.3:61696322-61696341 | None:intergenic | 45.0% |
| ! | CATAGCTAATGGATGGCTCA+AGG | - | chr8.3:61697604-61697623 | MS.gene57685:CDS | 45.0% |
| !! | AAAGTTTTGGTAGTCGGGTG+TGG | - | chr8.3:61696432-61696451 | MS.gene57685:intron | 45.0% |
| !! | CTTTCCCAAAGCATTGGAAG+GGG | - | chr8.3:61698057-61698076 | MS.gene57685:CDS | 45.0% |
| !! | GCTTTCCCAAAGCATTGGAA+GGG | - | chr8.3:61698056-61698075 | MS.gene57685:CDS | 45.0% |
| !! | GTATTTGCCGGTTCATGTTG+TGG | - | chr8.3:61696996-61697015 | MS.gene57685:CDS | 45.0% |
| !! | TGCTTTCCCAAAGCATTGGA+AGG | - | chr8.3:61698055-61698074 | MS.gene57685:CDS | 45.0% |
| !! | TTTCCCAAAGCATTGGAAGG+GGG | - | chr8.3:61698058-61698077 | MS.gene57685:CDS | 45.0% |
| AGGCTTATGGGGAGTCAAAG+TGG | - | chr8.3:61698115-61698134 | MS.gene57685:CDS | 50.0% | |
| CGTAGCTGCATGTCTTCACT+AGG | - | chr8.3:61696941-61696960 | MS.gene57685:CDS | 50.0% | |
| CTTGCAAGGAGAGGCTTATG+GGG | - | chr8.3:61698104-61698123 | MS.gene57685:CDS | 50.0% | |
| GACTTGCAAGGAGAGGCTTA+TGG | - | chr8.3:61698102-61698121 | MS.gene57685:CDS | 50.0% | |
| GATAGGTATGTTGGTCCGGA+GGG | + | chr8.3:61696120-61696139 | None:intergenic | 50.0% | |
| GATCCCCCTTCCAATGCTTT+GGG | + | chr8.3:61698064-61698083 | None:intergenic | 50.0% | |
| GCCTCCGGTGAAAATAGTGA+AGG | - | chr8.3:61696318-61696337 | MS.gene57685:intron | 50.0% | |
| GCTGAAATTGCTAGGCCAGA+AGG | + | chr8.3:61695955-61695974 | None:intergenic | 50.0% | |
| TGATCCCCCTTCCAATGCTT+TGG | + | chr8.3:61698065-61698084 | None:intergenic | 50.0% | |
| ! | AAGGGCTAGCACCCCAATTA+TGG | + | chr8.3:61696488-61696507 | None:intergenic | 50.0% |
| ! | GCGCATGGTGAAGTATTTGC+CGG | - | chr8.3:61696984-61697003 | MS.gene57685:CDS | 50.0% |
| !! | AAGCATTGGAAGGGGGATCA+TGG | - | chr8.3:61698065-61698084 | MS.gene57685:CDS | 50.0% |
| !! | ATTGTAGGTGCTGGTCCTTC+TGG | - | chr8.3:61695937-61695956 | MS.gene57685:CDS | 50.0% |
| ACTTCACCATGCGCATCCCT+TGG | + | chr8.3:61696978-61696997 | None:intergenic | 55.0% | |
| CACCGGAGGCAATCACAAGA+TGG | + | chr8.3:61696308-61696327 | None:intergenic | 55.0% | |
| GATTCACCAAGGGATGCGCA+TGG | - | chr8.3:61696969-61696988 | MS.gene57685:CDS | 55.0% | |
| GGATAGGTATGTTGGTCCGG+AGG | + | chr8.3:61696121-61696140 | None:intergenic | 55.0% | |
| GGCTAGCACCCCAATTATGG+AGG | + | chr8.3:61696485-61696504 | None:intergenic | 55.0% | |
| TCGACCATGCGACAATAGCG+AGG | + | chr8.3:61696198-61696217 | None:intergenic | 55.0% | |
| TGTGCAGGACTTGCAAGGAG+AGG | - | chr8.3:61698095-61698114 | MS.gene57685:CDS | 55.0% | |
| AGGTATGTTGGTCCGGAGGG+TGG | + | chr8.3:61696117-61696136 | None:intergenic | 60.0% | |
| GGTATGTTGGTCCGGAGGGT+GGG | + | chr8.3:61696116-61696135 | None:intergenic | 60.0% | |
| GTAGTCGGGTGTGGCAACTC+AGG | - | chr8.3:61696441-61696460 | MS.gene57685:intron | 60.0% | |
| CTCATGCCTCACCCACCCTC+CGG | - | chr8.3:61696102-61696121 | MS.gene57685:intron | 65.0% | |
| GAGGGTGGGTGAGGCATGAG+GGG | + | chr8.3:61696102-61696121 | None:intergenic | 65.0% | |
| GGAGGGTGGGTGAGGCATGA+GGG | + | chr8.3:61696103-61696122 | None:intergenic | 65.0% | |
| CGGAGGGTGGGTGAGGCATG+AGG | + | chr8.3:61696104-61696123 | None:intergenic | 70.0% | |
| GTTGGTCCGGAGGGTGGGTG+AGG | + | chr8.3:61696111-61696130 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 61695916 | 61698190 | 61695916 | ID=MS.gene57685 |
| chr8.3 | mRNA | 61695916 | 61698190 | 61695916 | ID=MS.gene57685.t1;Parent=MS.gene57685 |
| chr8.3 | exon | 61697579 | 61698190 | 61697579 | ID=MS.gene57685.t1.exon1;Parent=MS.gene57685.t1 |
| chr8.3 | CDS | 61697579 | 61698190 | 61697579 | ID=cds.MS.gene57685.t1;Parent=MS.gene57685.t1 |
| chr8.3 | exon | 61696927 | 61697160 | 61696927 | ID=MS.gene57685.t1.exon2;Parent=MS.gene57685.t1 |
| chr8.3 | CDS | 61696927 | 61697160 | 61696927 | ID=cds.MS.gene57685.t1;Parent=MS.gene57685.t1 |
| chr8.3 | exon | 61696481 | 61696606 | 61696481 | ID=MS.gene57685.t1.exon3;Parent=MS.gene57685.t1 |
| chr8.3 | CDS | 61696481 | 61696606 | 61696481 | ID=cds.MS.gene57685.t1;Parent=MS.gene57685.t1 |
| chr8.3 | exon | 61695916 | 61696092 | 61695916 | ID=MS.gene57685.t1.exon4;Parent=MS.gene57685.t1 |
| chr8.3 | CDS | 61695916 | 61696092 | 61695916 | ID=cds.MS.gene57685.t1;Parent=MS.gene57685.t1 |
| Gene Sequence |
| Protein sequence |
