Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57750.t1 | XP_013458139.1 | 94.6 | 463 | 24 | 1 | 1 | 462 | 1 | 463 | 1.90E-255 | 891.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57750.t1 | Q4KLQ5 | 28.5 | 471 | 316 | 12 | 5 | 459 | 113 | 578 | 2.3e-44 | 181.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57750.t1 | A0A072V213 | 94.6 | 463 | 24 | 1 | 1 | 462 | 1 | 463 | 1.3e-255 | 891.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene57750 | 0.828677 | 7.87E-55 | -1.69E-46 |
| MS.gene049989 | MS.gene57750 | 0.838388 | 2.96E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene57750 | 0.836181 | 1.09E-56 | -1.69E-46 |
| MS.gene050875 | MS.gene57750 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene05124 | MS.gene57750 | 0.852603 | 4.14E-61 | -1.69E-46 |
| MS.gene051742 | MS.gene57750 | 0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene57750 | 0.865482 | 5.72E-65 | -1.69E-46 |
| MS.gene051955 | MS.gene57750 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene57750 | 0.847779 | 9.32E-60 | -1.69E-46 |
| MS.gene052169 | MS.gene57750 | 0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene57750 | 0.865882 | 4.28E-65 | -1.69E-46 |
| MS.gene052367 | MS.gene57750 | 0.888549 | 5.35E-73 | -1.69E-46 |
| MS.gene053173 | MS.gene57750 | 0.900386 | 7.72E-78 | -1.69E-46 |
| MS.gene053348 | MS.gene57750 | 0.823298 | 1.49E-53 | -1.69E-46 |
| MS.gene053416 | MS.gene57750 | 0.843207 | 1.61E-58 | -1.69E-46 |
| MS.gene053417 | MS.gene57750 | 0.841186 | 5.54E-58 | -1.69E-46 |
| MS.gene054018 | MS.gene57750 | 0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene054459 | MS.gene57750 | 0.822437 | 2.37E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene57750 | 0.895484 | 9.17E-76 | -1.69E-46 |
| MS.gene054593 | MS.gene57750 | 0.873861 | 1.06E-67 | -1.69E-46 |
| MS.gene054633 | MS.gene57750 | 0.856497 | 3.09E-62 | -1.69E-46 |
| MS.gene054643 | MS.gene57750 | 0.828285 | 9.79E-55 | -1.69E-46 |
| MS.gene054662 | MS.gene57750 | 0.859872 | 3.06E-63 | -1.69E-46 |
| MS.gene054885 | MS.gene57750 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene57750 | 0.881166 | 3.01E-70 | -1.69E-46 |
| MS.gene055411 | MS.gene57750 | 0.800802 | 1.21E-48 | -1.69E-46 |
| MS.gene055578 | MS.gene57750 | 0.882381 | 1.09E-70 | -1.69E-46 |
| MS.gene055579 | MS.gene57750 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene57750 | 0.859188 | 4.92E-63 | -1.69E-46 |
| MS.gene056041 | MS.gene57750 | 0.882821 | 7.55E-71 | -1.69E-46 |
| MS.gene05640 | MS.gene57750 | 0.893819 | 4.40E-75 | -1.69E-46 |
| MS.gene056526 | MS.gene57750 | 0.83681 | 7.52E-57 | -1.69E-46 |
| MS.gene05652 | MS.gene57750 | 0.847335 | 1.23E-59 | -1.69E-46 |
| MS.gene05732 | MS.gene57750 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene57750 | 0.851901 | 6.56E-61 | -1.69E-46 |
| MS.gene057458 | MS.gene57750 | 0.878467 | 2.74E-69 | -1.69E-46 |
| MS.gene057483 | MS.gene57750 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene058128 | MS.gene57750 | 0.839437 | 1.59E-57 | -1.69E-46 |
| MS.gene058818 | MS.gene57750 | 0.840784 | 7.06E-58 | -1.69E-46 |
| MS.gene058844 | MS.gene57750 | 0.826747 | 2.29E-54 | -1.69E-46 |
| MS.gene058849 | MS.gene57750 | 0.814847 | 1.25E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene57750 | 0.865538 | 5.49E-65 | -1.69E-46 |
| MS.gene059553 | MS.gene57750 | 0.841058 | 5.98E-58 | -1.69E-46 |
| MS.gene059616 | MS.gene57750 | 0.81701 | 4.11E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene57750 | 0.855409 | 6.43E-62 | -1.69E-46 |
| MS.gene060565 | MS.gene57750 | 0.84329 | 1.54E-58 | -1.69E-46 |
| MS.gene06057 | MS.gene57750 | 0.802615 | 5.16E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene57750 | 0.919199 | 6.06E-87 | -1.69E-46 |
| MS.gene061099 | MS.gene57750 | 0.85127 | 9.90E-61 | -1.69E-46 |
| MS.gene061260 | MS.gene57750 | 0.883194 | 5.51E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57750.t1 | MTR_4g116900 | 94.600 | 463 | 24 | 1 | 1 | 462 | 1 | 463 | 0.0 | 918 |
| MS.gene57750.t1 | MTR_4g116910 | 63.866 | 476 | 118 | 15 | 3 | 462 | 4 | 441 | 0.0 | 565 |
| MS.gene57750.t1 | MTR_5g067190 | 75.556 | 45 | 10 | 1 | 223 | 267 | 2 | 45 | 2.31e-16 | 73.6 |
| MS.gene57750.t1 | MTR_5g070310 | 25.305 | 328 | 200 | 14 | 167 | 459 | 173 | 490 | 6.19e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57750.t1 | AT1G80710 | 46.035 | 517 | 213 | 9 | 7 | 461 | 3 | 515 | 7.95e-152 | 442 |
| MS.gene57750.t1 | AT5G58760 | 26.543 | 324 | 201 | 15 | 167 | 459 | 173 | 490 | 2.04e-18 | 88.2 |
| MS.gene57750.t1 | AT5G58760 | 26.543 | 324 | 201 | 15 | 167 | 459 | 75 | 392 | 4.17e-18 | 87.0 |
Find 135 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACATCAGGCTCCTATTTC+TGG | 0.092960 | 8.3:+9204910 | MS.gene57750:CDS |
| TGAGTTGGAATCTTTGAATT+TGG | 0.196115 | 8.3:+9204738 | MS.gene57750:CDS |
| GAAGATGGATTTCGACTTTC+AGG | 0.196405 | 8.3:+9205998 | MS.gene57750:CDS |
| TTATATTTCGCTGAGGGTTC+CGG | 0.222463 | 8.3:+9205407 | MS.gene57750:CDS |
| AACAATTGGGGTTTCAGTTT+TGG | 0.223709 | 8.3:-9204458 | None:intergenic |
| GGTAACAAATTCGGGGATAT+TGG | 0.233584 | 8.3:+9204847 | MS.gene57750:CDS |
| GCGGAGGCCAGATTTATATT+TGG | 0.258336 | 8.3:+9206444 | MS.gene57750:CDS |
| CGCATTTGGGTTATCCTTCC+AGG | 0.267384 | 8.3:-9204787 | None:intergenic |
| ACCTGGGATTTGAGATCTAT+TGG | 0.273496 | 8.3:+9205569 | MS.gene57750:CDS |
| AAACAGTTAGCCTCATTCTT+TGG | 0.287246 | 8.3:-9205386 | None:intergenic |
| TGGAAGGGCAAAACCGCATT+TGG | 0.290371 | 8.3:-9204801 | None:intergenic |
| TGATGATGTTGTTCAAAATC+TGG | 0.296005 | 8.3:+9204570 | MS.gene57750:CDS |
| TATATTTCGCTGAGGGTTCC+GGG | 0.299955 | 8.3:+9205408 | MS.gene57750:CDS |
| TTCTCAGAAGAAGAATTTAA+TGG | 0.306030 | 8.3:+9204682 | MS.gene57750:CDS |
| GTCTCTCTGTTTGGGATAAC+AGG | 0.314995 | 8.3:+9205432 | MS.gene57750:CDS |
| CTACAATATGAGGGCTTTGC+GGG | 0.319271 | 8.3:-9205517 | None:intergenic |
| TAGCAGCGGGTAACAAATTC+GGG | 0.337111 | 8.3:+9204839 | MS.gene57750:CDS |
| GAATCAGAGCCTTTGGAATC+TGG | 0.340425 | 8.3:-9204514 | None:intergenic |
| CGATTTCACAGTATACGATT+TGG | 0.344728 | 8.3:-9204425 | None:intergenic |
| GTAGCAGCGGGTAACAAATT+CGG | 0.352711 | 8.3:+9204838 | MS.gene57750:CDS |
| GTAACAAATTCGGGGATATT+GGG | 0.352863 | 8.3:+9204848 | MS.gene57750:CDS |
| TGAAACAAGATCCCAGAAAT+AGG | 0.357504 | 8.3:-9204922 | None:intergenic |
| TCTTTCATCGAATCGCTTGT+TGG | 0.359103 | 8.3:+9204643 | MS.gene57750:CDS |
| GACAGTTCATACCTCTTCAT+TGG | 0.362273 | 8.3:+9206281 | MS.gene57750:CDS |
| TTCTTCTGAGAATTCCTTGT+TGG | 0.364938 | 8.3:-9204671 | None:intergenic |
| CCCATGAAAGATGCTTATAA+AGG | 0.372891 | 8.3:+9204601 | MS.gene57750:CDS |
| GCCTTTATAAGCATCTTTCA+TGG | 0.378659 | 8.3:-9204602 | None:intergenic |
| CCTGGGATTTGAGATCTATT+GGG | 0.381614 | 8.3:+9205570 | MS.gene57750:CDS |
| TGATGGACTTATTCGATTGA+TGG | 0.384074 | 8.3:+9205298 | MS.gene57750:CDS |
| TTGCCCTTCCAATGATGTTA+AGG | 0.384852 | 8.3:+9204813 | MS.gene57750:CDS |
| TTGTGGTAGCAGAGCAATAT+GGG | 0.386766 | 8.3:+9206253 | MS.gene57750:intron |
| TCTCAGAAGAAGAATTTAAT+GGG | 0.386992 | 8.3:+9204683 | MS.gene57750:CDS |
| TTTGTGGTAGCAGAGCAATA+TGG | 0.387500 | 8.3:+9206252 | MS.gene57750:intron |
| AGTGTTAGAATCAGAGCCTT+TGG | 0.388291 | 8.3:-9204521 | None:intergenic |
| TAAGCATCTTTCATGGGAAT+AGG | 0.391292 | 8.3:-9204595 | None:intergenic |
| AATGGAGAGTTCGGTGGCTT+TGG | 0.393282 | 8.3:-9204300 | None:intergenic |
| AATTCGGGGATATTGGGTTC+TGG | 0.398791 | 8.3:+9204854 | MS.gene57750:CDS |
| GAACTAGTAGCTACAATATG+AGG | 0.402823 | 8.3:-9205527 | None:intergenic |
| AGTGAGCGTCTGATAACAAT+TGG | 0.404783 | 8.3:-9204472 | None:intergenic |
| TGAGAAGGAAATATTTGATA+TGG | 0.409089 | 8.3:+9205325 | MS.gene57750:CDS |
| TTGATGTCCAAATATAAATC+TGG | 0.414105 | 8.3:-9206451 | None:intergenic |
| CTGATGGAACTGCATGTACC+TGG | 0.416707 | 8.3:+9205552 | MS.gene57750:CDS |
| ATAAACACTCTTATGAGGTT+GGG | 0.421173 | 8.3:+9206402 | MS.gene57750:CDS |
| CAAATCGTATACTGTGAAAT+CGG | 0.424791 | 8.3:+9204426 | MS.gene57750:CDS |
| GGAAGGGCAAAACCGCATTT+GGG | 0.429167 | 8.3:-9204800 | None:intergenic |
| GAAAGTCGAAATCCATCTTC+CGG | 0.433669 | 8.3:-9205995 | None:intergenic |
| CACATCAGGCTCCTATTTCT+GGG | 0.434666 | 8.3:+9204911 | MS.gene57750:CDS |
| GATAAACACTCTTATGAGGT+TGG | 0.438621 | 8.3:+9206401 | MS.gene57750:CDS |
| GGAATCTTTGAATTTGGATC+CGG | 0.442264 | 8.3:+9204744 | MS.gene57750:CDS |
| AATATCGCACGTGTTGTTCC+TGG | 0.445323 | 8.3:+9204769 | MS.gene57750:CDS |
| ATTTGATAAACACTCTTATG+AGG | 0.451517 | 8.3:+9206397 | MS.gene57750:CDS |
| GGAATCTGGTGGAATACCTC+TGG | 0.457148 | 8.3:-9204500 | None:intergenic |
| TGCTACCACCTTAACATCAT+TGG | 0.457613 | 8.3:-9204821 | None:intergenic |
| TATATACAGTGGAGTTAACT+TGG | 0.462698 | 8.3:+9205939 | MS.gene57750:CDS |
| TACTTTCATGCAAATCCCAT+TGG | 0.464977 | 8.3:-9205472 | None:intergenic |
| GTGAGCGTCTGATAACAATT+GGG | 0.470746 | 8.3:-9204471 | None:intergenic |
| TGTAGCCTGGACAACACTAT+TGG | 0.471622 | 8.3:+9205916 | MS.gene57750:intron |
| TGAGGACATTTACTCACAAA+AGG | 0.474639 | 8.3:+9205612 | MS.gene57750:CDS |
| GATATTGGGTTCTGGAATGT+TGG | 0.476414 | 8.3:+9204862 | MS.gene57750:CDS |
| GGTCTGATTGTCATGATAAA+CGG | 0.477120 | 8.3:-9205974 | None:intergenic |
| ATTTGAGTGTTCGCTTGAGT+TGG | 0.478159 | 8.3:+9204723 | MS.gene57750:CDS |
| ACTTTCATGCAAATCCCATT+GGG | 0.482094 | 8.3:-9205471 | None:intergenic |
| TTATAAAGGCGATGATGATT+CGG | 0.487262 | 8.3:+9204615 | MS.gene57750:CDS |
| TAGCAGAGCAATATGGGGTT+GGG | 0.492077 | 8.3:+9206259 | MS.gene57750:intron |
| AAAAGAATACTTGGGACGAA+TGG | 0.495955 | 8.3:-9204318 | None:intergenic |
| CGTTGTCTCTACAGTTCAAA+GGG | 0.496552 | 8.3:+9206325 | MS.gene57750:CDS |
| GCTACAATATGAGGGCTTTG+CGG | 0.496751 | 8.3:-9205518 | None:intergenic |
| TTCATTGGAAATATGAAAAG+AGG | 0.497485 | 8.3:+9206296 | MS.gene57750:CDS |
| GTCCTCAAGGCTGTGTGCTT+AGG | 0.497924 | 8.3:-9205596 | None:intergenic |
| CCTTTATAAGCATCTTTCAT+GGG | 0.502905 | 8.3:-9204601 | None:intergenic |
| TATGAGGTTGGGATGCTAGC+AGG | 0.503200 | 8.3:+9206413 | MS.gene57750:CDS |
| TCGATTGATGGATGCTGAGA+AGG | 0.505059 | 8.3:+9205310 | MS.gene57750:CDS |
| AACTGTTTATATTTCGCTGA+GGG | 0.508414 | 8.3:+9205401 | MS.gene57750:CDS |
| CTTGGGACGAATGGAGAGTT+CGG | 0.508584 | 8.3:-9204309 | None:intergenic |
| AGGAAAGTGTTCATCCCAAT+GGG | 0.510778 | 8.3:+9205457 | MS.gene57750:CDS |
| CGGCCATCATTTCATTGTTG+CGG | 0.516632 | 8.3:-9204262 | None:intergenic |
| AATGGGATTTGCATGAAAGT+AGG | 0.520166 | 8.3:+9205474 | MS.gene57750:CDS |
| ATGACAATCAGACCGGAAGA+TGG | 0.524412 | 8.3:+9205983 | MS.gene57750:CDS |
| GATGTTAAGGTGGTAGCAGC+GGG | 0.524672 | 8.3:+9204826 | MS.gene57750:CDS |
| CTGGGATTTGAGATCTATTG+GGG | 0.525224 | 8.3:+9205571 | MS.gene57750:CDS |
| ATATACCAATAGTGTTGTCC+AGG | 0.531302 | 8.3:-9205921 | None:intergenic |
| ATATACACAAGTTGTTATGA+TGG | 0.537768 | 8.3:+9205281 | MS.gene57750:CDS |
| TCGCCGCAACAATGAAATGA+TGG | 0.543191 | 8.3:+9204259 | MS.gene57750:CDS |
| GATGATGTTGTTCAAAATCT+GGG | 0.544164 | 8.3:+9204571 | MS.gene57750:CDS |
| ACGTTGTCTCTACAGTTCAA+AGG | 0.549032 | 8.3:+9206324 | MS.gene57750:CDS |
| GTAGCTACTAGTTCCTCTGA+TGG | 0.549366 | 8.3:+9205536 | MS.gene57750:CDS |
| TAGGAAAGTGTTCATCCCAA+TGG | 0.550904 | 8.3:+9205456 | MS.gene57750:CDS |
| ACCACCTTAACATCATTGGA+AGG | 0.556454 | 8.3:-9204817 | None:intergenic |
| CCCAATAGATCTCAAATCCC+AGG | 0.556839 | 8.3:-9205570 | None:intergenic |
| GTAGCAGAGCAATATGGGGT+TGG | 0.558769 | 8.3:+9206258 | MS.gene57750:intron |
| GATGCAGCCTTGCCACTACA+AGG | 0.562293 | 8.3:+9205666 | MS.gene57750:CDS |
| CACAGTATACGATTTGGTAA+CGG | 0.567926 | 8.3:-9204419 | None:intergenic |
| CCCTTCCAATGATGTTAAGG+TGG | 0.572877 | 8.3:+9204816 | MS.gene57750:CDS |
| ATATTTCGCTGAGGGTTCCG+GGG | 0.573475 | 8.3:+9205409 | MS.gene57750:CDS |
| TCAACCGCATTGCTTATCAA+AGG | 0.576135 | 8.3:+9204942 | MS.gene57750:CDS |
| TCTGTTTGGGATAACAGGAT+AGG | 0.581370 | 8.3:+9205437 | MS.gene57750:CDS |
| CATCATACCTTGTAGTGGCA+AGG | 0.584682 | 8.3:-9205673 | None:intergenic |
| GTTTATCATGACAATCAGAC+CGG | 0.602016 | 8.3:+9205976 | MS.gene57750:CDS |
| TCGTACTCAGTGAGTTTCTG+AGG | 0.602589 | 8.3:-9204215 | None:intergenic |
| ATATTTGATATGGTATACAA+TGG | 0.605173 | 8.3:+9205335 | MS.gene57750:CDS |
| TCAGAGCCTTTGGAATCTGG+TGG | 0.611319 | 8.3:-9204511 | None:intergenic |
| GGTACATGCAGTTCCATCAG+AGG | 0.614744 | 8.3:-9205549 | None:intergenic |
| TGATGTTAAGGTGGTAGCAG+CGG | 0.615161 | 8.3:+9204825 | MS.gene57750:CDS |
| TCTCTCACATCCAAAGAATG+AGG | 0.616628 | 8.3:+9205376 | MS.gene57750:CDS |
| AACTAGTAGCTACAATATGA+GGG | 0.618195 | 8.3:-9205526 | None:intergenic |
| TGAGCGTCTGATAACAATTG+GGG | 0.620630 | 8.3:-9204470 | None:intergenic |
| GTGGCAAGGCTGCATCCAGA+AGG | 0.621855 | 8.3:-9205659 | None:intergenic |
| TATTTCGCTGAGGGTTCCGG+GGG | 0.622011 | 8.3:+9205410 | MS.gene57750:CDS |
| GGGATTTGAGATCTATTGGG+GGG | 0.622594 | 8.3:+9205573 | MS.gene57750:CDS |
| TGATGGAACTGCATGTACCT+GGG | 0.625891 | 8.3:+9205553 | MS.gene57750:CDS |
| GAGTGTTTATCAAATCTGCA+TGG | 0.627999 | 8.3:-9206389 | None:intergenic |
| AACACTATTGGTATATACAG+TGG | 0.628310 | 8.3:+9205928 | MS.gene57750:CDS |
| TTTGTGAGTAAATGTCCTCA+AGG | 0.630489 | 8.3:-9205609 | None:intergenic |
| ATACAGTGGAGTTAACTTGG+AGG | 0.630978 | 8.3:+9205942 | MS.gene57750:CDS |
| GGCCTCATCATACCTTGTAG+TGG | 0.633307 | 8.3:-9205678 | None:intergenic |
| TCGCACGTGTTGTTCCTGGA+AGG | 0.643299 | 8.3:+9204773 | MS.gene57750:CDS |
| CCAGAAATAGGAGCCTGATG+TGG | 0.643342 | 8.3:-9204910 | None:intergenic |
| GGCCTAAGCACACAGCCTTG+AGG | 0.643539 | 8.3:+9205594 | MS.gene57750:CDS |
| TAACTGTTTATATTTCGCTG+AGG | 0.645770 | 8.3:+9205400 | MS.gene57750:CDS |
| TGTGGTAGCAGAGCAATATG+GGG | 0.651905 | 8.3:+9206254 | MS.gene57750:intron |
| GGGACGAATGGAGAGTTCGG+TGG | 0.653277 | 8.3:-9204306 | None:intergenic |
| CCACCTTAACATCATTGGAA+GGG | 0.653532 | 8.3:-9204816 | None:intergenic |
| ATCCCAAACAGAGAGACCCC+CGG | 0.661178 | 8.3:-9205426 | None:intergenic |
| CATGGAATTGCAGATATGTG+TGG | 0.666944 | 8.3:-9206371 | None:intergenic |
| TGGGATTTGAGATCTATTGG+GGG | 0.667120 | 8.3:+9205572 | MS.gene57750:CDS |
| CTAGCAGGAGCTACAAGCGG+AGG | 0.667634 | 8.3:+9206428 | MS.gene57750:CDS |
| TTTGGTGTGAACTTTGAGAG+CGG | 0.670301 | 8.3:-9204282 | None:intergenic |
| GGTATTCCACCAGATTCCAA+AGG | 0.670976 | 8.3:+9204505 | MS.gene57750:CDS |
| ATGCTAGCAGGAGCTACAAG+CGG | 0.673470 | 8.3:+9206425 | MS.gene57750:CDS |
| ATGGAATTGCAGATATGTGT+GGG | 0.678362 | 8.3:-9206370 | None:intergenic |
| CTGGAAGGATAACCCAAATG+CGG | 0.678427 | 8.3:+9204788 | MS.gene57750:CDS |
| AGACGCTCACTTCGAACCAG+AGG | 0.684951 | 8.3:+9204484 | MS.gene57750:CDS |
| AGCAGCGGGTAACAAATTCG+GGG | 0.689640 | 8.3:+9204840 | MS.gene57750:CDS |
| GCTTGTTGGTATGTCCAACA+AGG | 0.692787 | 8.3:+9204657 | MS.gene57750:CDS |
| CAAACCTTTGATAAGCAATG+CGG | 0.698344 | 8.3:-9204946 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTTCCTTTTTAATT+AGG | - | chr8.3:9206204-9206223 | None:intergenic | 10.0% |
| !! | TACTTACAAAAAATACTTAA+GGG | - | chr8.3:9205221-9205240 | None:intergenic | 15.0% |
| !! | TAGTTTCTATAATTTAGAAA+AGG | + | chr8.3:9205161-9205180 | MS.gene57750:intron | 15.0% |
| !! | TGAATCACAAAAAAAAAAAT+TGG | - | chr8.3:9205828-9205847 | None:intergenic | 15.0% |
| !!! | ATTGTAACTCATTTTAAATA+TGG | - | chr8.3:9205733-9205752 | None:intergenic | 15.0% |
| !! | AAAGAAGAAAAAAGAATACT+TGG | - | chr8.3:9204330-9204349 | None:intergenic | 20.0% |
| !! | AAGAAGAAAAAAGAATACTT+GGG | - | chr8.3:9204329-9204348 | None:intergenic | 20.0% |
| !! | ATATTTGATATGGTATACAA+TGG | + | chr8.3:9205335-9205354 | MS.gene57750:CDS | 20.0% |
| !! | ATTCATAATTATAATGAGCT+TGG | + | chr8.3:9205843-9205862 | MS.gene57750:intron | 20.0% |
| !! | CTACTTACAAAAAATACTTA+AGG | - | chr8.3:9205222-9205241 | None:intergenic | 20.0% |
| !! | TGGTATTAAAAATGAAACAA+AGG | - | chr8.3:9205702-9205721 | None:intergenic | 20.0% |
| !! | TTTAATTGTTGTGAATTTGA+TGG | + | chr8.3:9205870-9205889 | MS.gene57750:intron | 20.0% |
| !!! | ATTGATATTTTTTGCAAAGT+GGG | - | chr8.3:9206103-9206122 | None:intergenic | 20.0% |
| ! | AAATATCAATGTCAATGTTG+AGG | + | chr8.3:9206113-9206132 | MS.gene57750:intron | 25.0% |
| ! | AATATCAATGTCAATGTTGA+GGG | + | chr8.3:9206114-9206133 | MS.gene57750:intron | 25.0% |
| ! | ATATACACAAGTTGTTATGA+TGG | + | chr8.3:9205281-9205300 | MS.gene57750:CDS | 25.0% |
| ! | ATCAAATAACAATAAGTACC+AGG | - | chr8.3:9205778-9205797 | None:intergenic | 25.0% |
| ! | ATTTGATAAACACTCTTATG+AGG | + | chr8.3:9206397-9206416 | MS.gene57750:CDS | 25.0% |
| ! | TAACTAACTGTTTCAGAAAT+CGG | - | chr8.3:9204985-9205004 | None:intergenic | 25.0% |
| ! | TCTCAGAAGAAGAATTTAAT+GGG | + | chr8.3:9204683-9204702 | MS.gene57750:CDS | 25.0% |
| ! | TGAGAAGGAAATATTTGATA+TGG | + | chr8.3:9205325-9205344 | MS.gene57750:CDS | 25.0% |
| ! | TTCACTCTTCCTAATTAAAA+AGG | + | chr8.3:9206192-9206211 | MS.gene57750:intron | 25.0% |
| ! | TTCATTGGAAATATGAAAAG+AGG | + | chr8.3:9206296-9206315 | MS.gene57750:CDS | 25.0% |
| ! | TTCTCAGAAGAAGAATTTAA+TGG | + | chr8.3:9204682-9204701 | MS.gene57750:CDS | 25.0% |
| ! | TTGATGTCCAAATATAAATC+TGG | - | chr8.3:9206454-9206473 | None:intergenic | 25.0% |
| !! | AAAATACTTAAGGGTATGTT+TGG | - | chr8.3:9205212-9205231 | None:intergenic | 25.0% |
| !! | TTTTAAATATGGAGAGATAG+TGG | - | chr8.3:9205722-9205741 | None:intergenic | 25.0% |
| !! | TTTTCATATTTCCAATGAAG+AGG | - | chr8.3:9206295-9206314 | None:intergenic | 25.0% |
| !!! | AACATCATCAATTTTTTGAG+GGG | - | chr8.3:9204560-9204579 | None:intergenic | 25.0% |
| !!! | ACAACATCATCAATTTTTTG+AGG | - | chr8.3:9204562-9204581 | None:intergenic | 25.0% |
| !!! | CAACATCATCAATTTTTTGA+GGG | - | chr8.3:9204561-9204580 | None:intergenic | 25.0% |
| !!! | CATTGATATTTTTTGCAAAG+TGG | - | chr8.3:9206104-9206123 | None:intergenic | 25.0% |
| !!! | TTCGTTTTTTTGAATTCACA+GGG | + | chr8.3:9204396-9204415 | MS.gene57750:intron | 25.0% |
| !!! | TTTCGTTTTTTTGAATTCAC+AGG | + | chr8.3:9204395-9204414 | MS.gene57750:intron | 25.0% |
| AACACTATTGGTATATACAG+TGG | + | chr8.3:9205928-9205947 | MS.gene57750:CDS | 30.0% | |
| AACTAGTAGCTACAATATGA+GGG | - | chr8.3:9205529-9205548 | None:intergenic | 30.0% | |
| AACTGTTTATATTTCGCTGA+GGG | + | chr8.3:9205401-9205420 | MS.gene57750:CDS | 30.0% | |
| ATAAACACTCTTATGAGGTT+GGG | + | chr8.3:9206402-9206421 | MS.gene57750:CDS | 30.0% | |
| CAAATCGTATACTGTGAAAT+CGG | + | chr8.3:9204426-9204445 | MS.gene57750:CDS | 30.0% | |
| CCTTTATAAGCATCTTTCAT+GGG | - | chr8.3:9204604-9204623 | None:intergenic | 30.0% | |
| GATGATGTTGTTCAAAATCT+GGG | + | chr8.3:9204571-9204590 | MS.gene57750:CDS | 30.0% | |
| TAACTGTTTATATTTCGCTG+AGG | + | chr8.3:9205400-9205419 | MS.gene57750:CDS | 30.0% | |
| TATATACAGTGGAGTTAACT+TGG | + | chr8.3:9205939-9205958 | MS.gene57750:CDS | 30.0% | |
| TCTAGTTGACATTGTTATCT+TGG | + | chr8.3:9206228-9206247 | MS.gene57750:intron | 30.0% | |
| TTATAAAGGCGATGATGATT+CGG | + | chr8.3:9204615-9204634 | MS.gene57750:CDS | 30.0% | |
| ! | TATGTTTGGATGAAGGTTTT+TGG | - | chr8.3:9205198-9205217 | None:intergenic | 30.0% |
| ! | TGAGTTGGAATCTTTGAATT+TGG | + | chr8.3:9204738-9204757 | MS.gene57750:CDS | 30.0% |
| ! | TGATGATGTTGTTCAAAATC+TGG | + | chr8.3:9204570-9204589 | MS.gene57750:CDS | 30.0% |
| !!! | ACATTGTTATCTTGGTTTTG+TGG | + | chr8.3:9206236-9206255 | MS.gene57750:intron | 30.0% |
| !!! | TTTTTTGTATCATCCACATC+AGG | + | chr8.3:9204897-9204916 | MS.gene57750:CDS | 30.0% |
| AAAAGAATACTTGGGACGAA+TGG | - | chr8.3:9204321-9204340 | None:intergenic | 35.0% | |
| AATGGGATTTGCATGAAAGT+AGG | + | chr8.3:9205474-9205493 | MS.gene57750:CDS | 35.0% | |
| ACTCTAAACTGTCTGATGTT+TGG | + | chr8.3:9206142-9206161 | MS.gene57750:intron | 35.0% | |
| ACTTTCATGCAAATCCCATT+GGG | - | chr8.3:9205474-9205493 | None:intergenic | 35.0% | |
| ATATACCAATAGTGTTGTCC+AGG | - | chr8.3:9205924-9205943 | None:intergenic | 35.0% | |
| ATGGAATTGCAGATATGTGT+GGG | - | chr8.3:9206373-9206392 | None:intergenic | 35.0% | |
| CAAACCTTTGATAAGCAATG+CGG | - | chr8.3:9204949-9204968 | None:intergenic | 35.0% | |
| CCCATGAAAGATGCTTATAA+AGG | + | chr8.3:9204601-9204620 | MS.gene57750:CDS | 35.0% | |
| CGATTTCACAGTATACGATT+TGG | - | chr8.3:9204428-9204447 | None:intergenic | 35.0% | |
| GAAACAGTTAGTTATCTTCG+TGG | + | chr8.3:9204991-9205010 | MS.gene57750:intron | 35.0% | |
| GAACTAGTAGCTACAATATG+AGG | - | chr8.3:9205530-9205549 | None:intergenic | 35.0% | |
| GAGTGTTTATCAAATCTGCA+TGG | - | chr8.3:9206392-9206411 | None:intergenic | 35.0% | |
| GATAAACACTCTTATGAGGT+TGG | + | chr8.3:9206401-9206420 | MS.gene57750:CDS | 35.0% | |
| GCCTTTATAAGCATCTTTCA+TGG | - | chr8.3:9204605-9204624 | None:intergenic | 35.0% | |
| GGAATCTTTGAATTTGGATC+CGG | + | chr8.3:9204744-9204763 | MS.gene57750:CDS | 35.0% | |
| GGTCTGATTGTCATGATAAA+CGG | - | chr8.3:9205977-9205996 | None:intergenic | 35.0% | |
| GTAACAAATTCGGGGATATT+GGG | + | chr8.3:9204848-9204867 | MS.gene57750:CDS | 35.0% | |
| GTTTATCATGACAATCAGAC+CGG | + | chr8.3:9205976-9205995 | MS.gene57750:CDS | 35.0% | |
| TAAGCATCTTTCATGGGAAT+AGG | - | chr8.3:9204598-9204617 | None:intergenic | 35.0% | |
| TACTTTCATGCAAATCCCAT+TGG | - | chr8.3:9205475-9205494 | None:intergenic | 35.0% | |
| TGAAACAAGATCCCAGAAAT+AGG | - | chr8.3:9204925-9204944 | None:intergenic | 35.0% | |
| TGAGGACATTTACTCACAAA+AGG | + | chr8.3:9205612-9205631 | MS.gene57750:CDS | 35.0% | |
| TTTGTGAGTAAATGTCCTCA+AGG | - | chr8.3:9205612-9205631 | None:intergenic | 35.0% | |
| ! | AAACAGTTAGCCTCATTCTT+TGG | - | chr8.3:9205389-9205408 | None:intergenic | 35.0% |
| ! | AACAATTGGGGTTTCAGTTT+TGG | - | chr8.3:9204461-9204480 | None:intergenic | 35.0% |
| ! | ACAATTGGGGTTTCAGTTTT+GGG | - | chr8.3:9204460-9204479 | None:intergenic | 35.0% |
| ! | TTAAGGGTATGTTTGGATGA+AGG | - | chr8.3:9205205-9205224 | None:intergenic | 35.0% |
| ! | TTCTTCTGAGAATTCCTTGT+TGG | - | chr8.3:9204674-9204693 | None:intergenic | 35.0% |
| !! | CACAGTATACGATTTGGTAA+CGG | - | chr8.3:9204422-9204441 | None:intergenic | 35.0% |
| !! | TGATGGACTTATTCGATTGA+TGG | + | chr8.3:9205298-9205317 | MS.gene57750:CDS | 35.0% |
| ACCACCTTAACATCATTGGA+AGG | - | chr8.3:9204820-9204839 | None:intergenic | 40.0% | |
| ACGTTGTCTCTACAGTTCAA+AGG | + | chr8.3:9206324-9206343 | MS.gene57750:CDS | 40.0% | |
| AGTGAGCGTCTGATAACAAT+TGG | - | chr8.3:9204475-9204494 | None:intergenic | 40.0% | |
| AGTGTTAGAATCAGAGCCTT+TGG | - | chr8.3:9204524-9204543 | None:intergenic | 40.0% | |
| ATTTGAGTGTTCGCTTGAGT+TGG | + | chr8.3:9204723-9204742 | MS.gene57750:CDS | 40.0% | |
| CATGGAATTGCAGATATGTG+TGG | - | chr8.3:9206374-9206393 | None:intergenic | 40.0% | |
| CCACCTTAACATCATTGGAA+GGG | - | chr8.3:9204819-9204838 | None:intergenic | 40.0% | |
| CGTTGTCTCTACAGTTCAAA+GGG | + | chr8.3:9206325-9206344 | MS.gene57750:CDS | 40.0% | |
| GAAAGTCGAAATCCATCTTC+CGG | - | chr8.3:9205998-9206017 | None:intergenic | 40.0% | |
| GACAGTTCATACCTCTTCAT+TGG | + | chr8.3:9206281-9206300 | MS.gene57750:CDS | 40.0% | |
| GCATCCAGAAGGAGAAAAAT+AGG | - | chr8.3:9205651-9205670 | None:intergenic | 40.0% | |
| GGTAACAAATTCGGGGATAT+TGG | + | chr8.3:9204847-9204866 | MS.gene57750:CDS | 40.0% | |
| GTGAGCGTCTGATAACAATT+GGG | - | chr8.3:9204474-9204493 | None:intergenic | 40.0% | |
| TCAACCGCATTGCTTATCAA+AGG | + | chr8.3:9204942-9204961 | MS.gene57750:CDS | 40.0% | |
| TCGTGGATAGTATGTTTGCA+TGG | + | chr8.3:9205008-9205027 | MS.gene57750:intron | 40.0% | |
| TCTCTCACATCCAAAGAATG+AGG | + | chr8.3:9205376-9205395 | MS.gene57750:CDS | 40.0% | |
| TCTTTCATCGAATCGCTTGT+TGG | + | chr8.3:9204643-9204662 | MS.gene57750:CDS | 40.0% | |
| TGAGCGTCTGATAACAATTG+GGG | - | chr8.3:9204473-9204492 | None:intergenic | 40.0% | |
| TGCTACCACCTTAACATCAT+TGG | - | chr8.3:9204824-9204843 | None:intergenic | 40.0% | |
| TGTGAATATGCTTACTCGTG+TGG | + | chr8.3:9205752-9205771 | MS.gene57750:intron | 40.0% | |
| TGTTATCTCTTGATGTAGCC+TGG | + | chr8.3:9205903-9205922 | MS.gene57750:intron | 40.0% | |
| TTATATTTCGCTGAGGGTTC+CGG | + | chr8.3:9205407-9205426 | MS.gene57750:CDS | 40.0% | |
| TTGCCCTTCCAATGATGTTA+AGG | + | chr8.3:9204813-9204832 | MS.gene57750:CDS | 40.0% | |
| TTGTGGTAGCAGAGCAATAT+GGG | + | chr8.3:9206253-9206272 | MS.gene57750:intron | 40.0% | |
| TTTGTGGTAGCAGAGCAATA+TGG | + | chr8.3:9206252-9206271 | MS.gene57750:intron | 40.0% | |
| ! | ACAACACGTGCGATATTTTC+CGG | - | chr8.3:9204766-9204785 | None:intergenic | 40.0% |
| ! | ACCTGGGATTTGAGATCTAT+TGG | + | chr8.3:9205569-9205588 | MS.gene57750:CDS | 40.0% |
| ! | ATACAGTGGAGTTAACTTGG+AGG | + | chr8.3:9205942-9205961 | MS.gene57750:CDS | 40.0% |
| ! | CCTGGGATTTGAGATCTATT+GGG | + | chr8.3:9205570-9205589 | MS.gene57750:CDS | 40.0% |
| ! | CTGGGATTTGAGATCTATTG+GGG | + | chr8.3:9205571-9205590 | MS.gene57750:CDS | 40.0% |
| ! | GAAGATGGATTTCGACTTTC+AGG | + | chr8.3:9205998-9206017 | MS.gene57750:CDS | 40.0% |
| ! | TCTGTTTGGGATAACAGGAT+AGG | + | chr8.3:9205437-9205456 | MS.gene57750:CDS | 40.0% |
| ! | TGGGATTTGAGATCTATTGG+GGG | + | chr8.3:9205572-9205591 | MS.gene57750:CDS | 40.0% |
| ! | TTTGGTGTGAACTTTGAGAG+CGG | - | chr8.3:9204285-9204304 | None:intergenic | 40.0% |
| !! | AGGAAAGTGTTCATCCCAAT+GGG | + | chr8.3:9205457-9205476 | MS.gene57750:CDS | 40.0% |
| !! | GATATTGGGTTCTGGAATGT+TGG | + | chr8.3:9204862-9204881 | MS.gene57750:CDS | 40.0% |
| !! | TAGGAAAGTGTTCATCCCAA+TGG | + | chr8.3:9205456-9205475 | MS.gene57750:CDS | 40.0% |
| !! | TCAGCCTATTTTTCTCCTTC+TGG | + | chr8.3:9205644-9205663 | MS.gene57750:CDS | 40.0% |
| AAGTGGGACAAGTCAGCAAA+TGG | - | chr8.3:9206087-9206106 | None:intergenic | 45.0% | |
| AATTCGGGGATATTGGGTTC+TGG | + | chr8.3:9204854-9204873 | MS.gene57750:CDS | 45.0% | |
| ATGACAATCAGACCGGAAGA+TGG | + | chr8.3:9205983-9206002 | MS.gene57750:CDS | 45.0% | |
| CATCATACCTTGTAGTGGCA+AGG | - | chr8.3:9205676-9205695 | None:intergenic | 45.0% | |
| CCCAATAGATCTCAAATCCC+AGG | - | chr8.3:9205573-9205592 | None:intergenic | 45.0% | |
| CCCTTCCAATGATGTTAAGG+TGG | + | chr8.3:9204816-9204835 | MS.gene57750:CDS | 45.0% | |
| CGGCCATCATTTCATTGTTG+CGG | - | chr8.3:9204265-9204284 | None:intergenic | 45.0% | |
| CTACAATATGAGGGCTTTGC+GGG | - | chr8.3:9205520-9205539 | None:intergenic | 45.0% | |
| CTGGAAGGATAACCCAAATG+CGG | + | chr8.3:9204788-9204807 | MS.gene57750:CDS | 45.0% | |
| GCGGAGGCCAGATTTATATT+TGG | + | chr8.3:9206444-9206463 | MS.gene57750:CDS | 45.0% | |
| GCTACAATATGAGGGCTTTG+CGG | - | chr8.3:9205521-9205540 | None:intergenic | 45.0% | |
| GGTATTCCACCAGATTCCAA+AGG | + | chr8.3:9204505-9204524 | MS.gene57750:CDS | 45.0% | |
| GTAGCAGCGGGTAACAAATT+CGG | + | chr8.3:9204838-9204857 | MS.gene57750:CDS | 45.0% | |
| GTAGCTACTAGTTCCTCTGA+TGG | + | chr8.3:9205536-9205555 | MS.gene57750:CDS | 45.0% | |
| GTCAGCAAATGGCAAAAGAG+AGG | - | chr8.3:9206076-9206095 | None:intergenic | 45.0% | |
| TAGCAGAGCAATATGGGGTT+GGG | + | chr8.3:9206259-9206278 | MS.gene57750:intron | 45.0% | |
| TAGCAGCGGGTAACAAATTC+GGG | + | chr8.3:9204839-9204858 | MS.gene57750:CDS | 45.0% | |
| TATATTTCGCTGAGGGTTCC+GGG | + | chr8.3:9205408-9205427 | MS.gene57750:CDS | 45.0% | |
| TCGCCGCAACAATGAAATGA+TGG | + | chr8.3:9204259-9204278 | MS.gene57750:CDS | 45.0% | |
| TCGTACTCAGTGAGTTTCTG+AGG | - | chr8.3:9204218-9204237 | None:intergenic | 45.0% | |
| TGATGGAACTGCATGTACCT+GGG | + | chr8.3:9205553-9205572 | MS.gene57750:CDS | 45.0% | |
| TGATGTTAAGGTGGTAGCAG+CGG | + | chr8.3:9204825-9204844 | MS.gene57750:CDS | 45.0% | |
| TGCCACTACAAGGTATGATG+AGG | + | chr8.3:9205676-9205695 | MS.gene57750:intron | 45.0% | |
| TGTAGCCTGGACAACACTAT+TGG | + | chr8.3:9205916-9205935 | MS.gene57750:intron | 45.0% | |
| TGTGGTAGCAGAGCAATATG+GGG | + | chr8.3:9206254-9206273 | MS.gene57750:intron | 45.0% | |
| ! | AATATCGCACGTGTTGTTCC+TGG | + | chr8.3:9204769-9204788 | MS.gene57750:CDS | 45.0% |
| ! | CACATCAGGCTCCTATTTCT+GGG | + | chr8.3:9204911-9204930 | MS.gene57750:CDS | 45.0% |
| ! | GCTTGTTGGTATGTCCAACA+AGG | + | chr8.3:9204657-9204676 | MS.gene57750:CDS | 45.0% |
| ! | GGGATTTGAGATCTATTGGG+GGG | + | chr8.3:9205573-9205592 | MS.gene57750:CDS | 45.0% |
| ! | GTCTCTCTGTTTGGGATAAC+AGG | + | chr8.3:9205432-9205451 | MS.gene57750:CDS | 45.0% |
| ! | TCGATTGATGGATGCTGAGA+AGG | + | chr8.3:9205310-9205329 | MS.gene57750:CDS | 45.0% |
| ! | TGGATTTCGACTTTCAGGTG+CGG | + | chr8.3:9206003-9206022 | MS.gene57750:intron | 45.0% |
| !! | GAATCAGAGCCTTTGGAATC+TGG | - | chr8.3:9204517-9204536 | None:intergenic | 45.0% |
| AGCAGCGGGTAACAAATTCG+GGG | + | chr8.3:9204840-9204859 | MS.gene57750:CDS | 50.0% | |
| ATATGCTTACTCGTGTGGCC+TGG | + | chr8.3:9205757-9205776 | MS.gene57750:intron | 50.0% | |
| ATATTTCGCTGAGGGTTCCG+GGG | + | chr8.3:9205409-9205428 | MS.gene57750:CDS | 50.0% | |
| ATGCTAGCAGGAGCTACAAG+CGG | + | chr8.3:9206425-9206444 | MS.gene57750:CDS | 50.0% | |
| CCACATCAGGCTCCTATTTC+TGG | + | chr8.3:9204910-9204929 | MS.gene57750:CDS | 50.0% | |
| CCAGAAATAGGAGCCTGATG+TGG | - | chr8.3:9204913-9204932 | None:intergenic | 50.0% | |
| CTGATGGAACTGCATGTACC+TGG | + | chr8.3:9205552-9205571 | MS.gene57750:CDS | 50.0% | |
| CTTGGGACGAATGGAGAGTT+CGG | - | chr8.3:9204312-9204331 | None:intergenic | 50.0% | |
| GATGTTAAGGTGGTAGCAGC+GGG | + | chr8.3:9204826-9204845 | MS.gene57750:CDS | 50.0% | |
| GGAAGGGCAAAACCGCATTT+GGG | - | chr8.3:9204803-9204822 | None:intergenic | 50.0% | |
| GGAATCTGGTGGAATACCTC+TGG | - | chr8.3:9204503-9204522 | None:intergenic | 50.0% | |
| GGCCTCATCATACCTTGTAG+TGG | - | chr8.3:9205681-9205700 | None:intergenic | 50.0% | |
| GGTACATGCAGTTCCATCAG+AGG | - | chr8.3:9205552-9205571 | None:intergenic | 50.0% | |
| GTAGCAGAGCAATATGGGGT+TGG | + | chr8.3:9206258-9206277 | MS.gene57750:intron | 50.0% | |
| TATGAGGTTGGGATGCTAGC+AGG | + | chr8.3:9206413-9206432 | MS.gene57750:CDS | 50.0% | |
| TGGAAGGGCAAAACCGCATT+TGG | - | chr8.3:9204804-9204823 | None:intergenic | 50.0% | |
| ! | AATGGAGAGTTCGGTGGCTT+TGG | - | chr8.3:9204303-9204322 | None:intergenic | 50.0% |
| ! | ACTTTCAGGTGCGGTTTCTG+GGG | + | chr8.3:9206012-9206031 | MS.gene57750:intron | 50.0% |
| ! | CGCATTTGGGTTATCCTTCC+AGG | - | chr8.3:9204790-9204809 | None:intergenic | 50.0% |
| ! | GACTTTCAGGTGCGGTTTCT+GGG | + | chr8.3:9206011-9206030 | MS.gene57750:intron | 50.0% |
| !! | TCAGAGCCTTTGGAATCTGG+TGG | - | chr8.3:9204514-9204533 | None:intergenic | 50.0% |
| AGACGCTCACTTCGAACCAG+AGG | + | chr8.3:9204484-9204503 | MS.gene57750:CDS | 55.0% | |
| ATCCCAAACAGAGAGACCCC+CGG | - | chr8.3:9205429-9205448 | None:intergenic | 55.0% | |
| GATGCAGCCTTGCCACTACA+AGG | + | chr8.3:9205666-9205685 | MS.gene57750:CDS | 55.0% | |
| GTCCTCAAGGCTGTGTGCTT+AGG | - | chr8.3:9205599-9205618 | None:intergenic | 55.0% | |
| TATTTCGCTGAGGGTTCCGG+GGG | + | chr8.3:9205410-9205429 | MS.gene57750:CDS | 55.0% | |
| TTCCGGGGGTCTCTCTGTTT+GGG | + | chr8.3:9205424-9205443 | MS.gene57750:CDS | 55.0% | |
| ! | CGACTTTCAGGTGCGGTTTC+TGG | + | chr8.3:9206010-9206029 | MS.gene57750:intron | 55.0% |
| ! | TCGCACGTGTTGTTCCTGGA+AGG | + | chr8.3:9204773-9204792 | MS.gene57750:CDS | 55.0% |
| CTAGCAGGAGCTACAAGCGG+AGG | + | chr8.3:9206428-9206447 | MS.gene57750:CDS | 60.0% | |
| GGCCTAAGCACACAGCCTTG+AGG | + | chr8.3:9205594-9205613 | MS.gene57750:CDS | 60.0% | |
| GGGACGAATGGAGAGTTCGG+TGG | - | chr8.3:9204309-9204328 | None:intergenic | 60.0% | |
| GTGGCAAGGCTGCATCCAGA+AGG | - | chr8.3:9205662-9205681 | None:intergenic | 60.0% | |
| GTTCCGGGGGTCTCTCTGTT+TGG | + | chr8.3:9205423-9205442 | MS.gene57750:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9204209 | 9206478 | 9204209 | ID=MS.gene57750 |
| chr8.3 | mRNA | 9204209 | 9206478 | 9204209 | ID=MS.gene57750.t1;Parent=MS.gene57750 |
| chr8.3 | exon | 9204209 | 9204330 | 9204209 | ID=MS.gene57750.t1.exon1;Parent=MS.gene57750.t1 |
| chr8.3 | CDS | 9204209 | 9204330 | 9204209 | ID=cds.MS.gene57750.t1;Parent=MS.gene57750.t1 |
| chr8.3 | exon | 9204417 | 9204963 | 9204417 | ID=MS.gene57750.t1.exon2;Parent=MS.gene57750.t1 |
| chr8.3 | CDS | 9204417 | 9204963 | 9204417 | ID=cds.MS.gene57750.t1;Parent=MS.gene57750.t1 |
| chr8.3 | exon | 9205281 | 9205687 | 9205281 | ID=MS.gene57750.t1.exon3;Parent=MS.gene57750.t1 |
| chr8.3 | CDS | 9205281 | 9205687 | 9205281 | ID=cds.MS.gene57750.t1;Parent=MS.gene57750.t1 |
| chr8.3 | exon | 9205921 | 9206019 | 9205921 | ID=MS.gene57750.t1.exon4;Parent=MS.gene57750.t1 |
| chr8.3 | CDS | 9205921 | 9206019 | 9205921 | ID=cds.MS.gene57750.t1;Parent=MS.gene57750.t1 |
| chr8.3 | exon | 9206265 | 9206478 | 9206265 | ID=MS.gene57750.t1.exon5;Parent=MS.gene57750.t1 |
| chr8.3 | CDS | 9206265 | 9206478 | 9206265 | ID=cds.MS.gene57750.t1;Parent=MS.gene57750.t1 |
| Gene Sequence |
| Protein sequence |
