Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58053.t1 | XP_003609386.1 | 86.6 | 179 | 17 | 1 | 1 | 172 | 1 | 179 | 1.00E-78 | 302.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58053.t1 | Q9HA65 | 34.3 | 67 | 44 | 0 | 98 | 164 | 120 | 186 | 2.4e-07 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58053.t1 | G7JE75 | 86.6 | 179 | 17 | 1 | 1 | 172 | 1 | 179 | 7.6e-79 | 302.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene58053 | 0.814214 | 1.73E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene58053 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene049801 | MS.gene58053 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene58053 | 0.821463 | 3.98E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene58053 | 0.82409 | 9.75E-54 | -1.69E-46 |
| MS.gene050085 | MS.gene58053 | 0.823662 | 1.23E-53 | -1.69E-46 |
| MS.gene050213 | MS.gene58053 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene050359 | MS.gene58053 | 0.852195 | 5.41E-61 | -1.69E-46 |
| MS.gene050361 | MS.gene58053 | 0.83392 | 4.04E-56 | -1.69E-46 |
| MS.gene050646 | MS.gene58053 | 0.83303 | 6.74E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene58053 | 0.852379 | 4.80E-61 | -1.69E-46 |
| MS.gene050941 | MS.gene58053 | 0.821692 | 3.53E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene58053 | 0.807628 | 4.61E-50 | -1.69E-46 |
| MS.gene051209 | MS.gene58053 | 0.843825 | 1.10E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene58053 | 0.803786 | 2.95E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene58053 | -0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene58053 | 0.834842 | 2.37E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene58053 | 0.80804 | 3.77E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene58053 | 0.84768 | 9.92E-60 | -1.69E-46 |
| MS.gene052674 | MS.gene58053 | 0.822418 | 2.39E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene58053 | 0.825275 | 5.12E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene58053 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene58053 | 0.810229 | 1.28E-50 | -1.69E-46 |
| MS.gene052776 | MS.gene58053 | 0.84967 | 2.79E-60 | -1.69E-46 |
| MS.gene052932 | MS.gene58053 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene052994 | MS.gene58053 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene58053 | 0.816062 | 6.71E-52 | -1.69E-46 |
| MS.gene053486 | MS.gene58053 | 0.847271 | 1.29E-59 | -1.69E-46 |
| MS.gene053620 | MS.gene58053 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene053726 | MS.gene58053 | 0.833896 | 4.10E-56 | -1.69E-46 |
| MS.gene054892 | MS.gene58053 | 0.814631 | 1.40E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene58053 | 0.825327 | 4.98E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene58053 | 0.808567 | 2.91E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene58053 | 0.827998 | 1.15E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene58053 | 0.831643 | 1.49E-55 | -1.69E-46 |
| MS.gene056097 | MS.gene58053 | 0.821077 | 4.89E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene58053 | 0.816573 | 5.16E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene58053 | 0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene057174 | MS.gene58053 | 0.813892 | 2.03E-51 | -1.69E-46 |
| MS.gene057371 | MS.gene58053 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene58053 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene58053 | 0.817626 | 2.99E-52 | -1.69E-46 |
| MS.gene058289 | MS.gene58053 | 0.817505 | 3.18E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene58053 | 0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene58053 | 0.826329 | 2.88E-54 | -1.69E-46 |
| MS.gene059007 | MS.gene58053 | 0.863541 | 2.31E-64 | -1.69E-46 |
| MS.gene059170 | MS.gene58053 | 0.812479 | 4.15E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene58053 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene58053 | 0.80313 | 4.04E-49 | -1.69E-46 |
| MS.gene060785 | MS.gene58053 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene58053 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene58053 | 0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene58053 | 0.839496 | 1.53E-57 | -1.69E-46 |
| MS.gene060933 | MS.gene58053 | 0.829606 | 4.68E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene58053 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene061100 | MS.gene58053 | 0.821104 | 4.82E-53 | -1.69E-46 |
| MS.gene06121 | MS.gene58053 | 0.814411 | 1.56E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58053.t1 | MTR_4g115090 | 95.531 | 179 | 1 | 1 | 1 | 172 | 1 | 179 | 1.42e-117 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58053.t1 | AT5G52580 | 68.889 | 180 | 47 | 3 | 1 | 172 | 3 | 181 | 1.75e-78 | 246 |
| MS.gene58053.t1 | AT5G52580 | 68.889 | 180 | 47 | 3 | 1 | 172 | 3 | 181 | 1.91e-78 | 246 |
| MS.gene58053.t1 | AT5G52580 | 66.667 | 186 | 47 | 4 | 1 | 172 | 3 | 187 | 4.47e-76 | 240 |
Find 41 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGGGACTTCCTTGTTTA+TGG | 0.149479 | 8.3:+12036260 | MS.gene58053:CDS |
| CCAACTCAGTTTGCTATTAG+TGG | 0.288769 | 8.3:+12036219 | MS.gene58053:CDS |
| ACAGAAACCTTTACACCATT+AGG | 0.321041 | 8.3:+12036509 | MS.gene58053:CDS |
| CATTAGGGCGGTGCCGTTTA+CGG | 0.353169 | 8.3:+12036525 | MS.gene58053:CDS |
| CAGAAACCTTTACACCATTA+GGG | 0.356617 | 8.3:+12036510 | MS.gene58053:CDS |
| AAAGGGCATAACGCGGATAA+TGG | 0.370518 | 8.3:+12036382 | MS.gene58053:CDS |
| CGTAAACGGCACCGCCCTAA+TGG | 0.383654 | 8.3:-12036524 | None:intergenic |
| GATAATGGTTTGTCTGATAA+AGG | 0.386252 | 8.3:+12036397 | MS.gene58053:CDS |
| ATCATTGTTGTTCTATCGTC+AGG | 0.398946 | 8.3:+12036595 | MS.gene58053:CDS |
| AAGCTCATCTTCTAATGAAC+TGG | 0.399668 | 8.3:+12036152 | MS.gene58053:CDS |
| CATTAGAAGATGAGCTTTGT+TGG | 0.405449 | 8.3:-12036146 | None:intergenic |
| ATGAATTGCAACATTATCCT+TGG | 0.422003 | 8.3:-12036196 | None:intergenic |
| TCCGCGTTATGCCCTTTGTA+AGG | 0.444284 | 8.3:-12036376 | None:intergenic |
| CCTCCGCTATATTTCTATAG+TGG | 0.446004 | 8.3:+12039598 | MS.gene58053:CDS |
| AGGAGGCATACTCCTGCTCT+TGG | 0.450918 | 8.3:+12036562 | MS.gene58053:CDS |
| ATTGACCTGACATCCGTAAA+CGG | 0.471464 | 8.3:-12036538 | None:intergenic |
| TTACGGATGTCAGGTCAATC+AGG | 0.498746 | 8.3:+12036542 | MS.gene58053:CDS |
| CCACTAATAGCAAACTGAGT+TGG | 0.524205 | 8.3:-12036219 | None:intergenic |
| CGGTGCCGTTTACGGATGTC+AGG | 0.524230 | 8.3:+12036533 | MS.gene58053:CDS |
| CATGTTGCTTTATTGTAGCA+AGG | 0.529261 | 8.3:-12039636 | None:intergenic |
| TACTCTGAAAATCATTTACT+AGG | 0.531390 | 8.3:-12040382 | None:intergenic |
| AGACTTGGATACCTTACAAA+GGG | 0.544915 | 8.3:+12036365 | MS.gene58053:intron |
| ATATATTGCCATCCAAGAGC+AGG | 0.548583 | 8.3:-12036574 | None:intergenic |
| AGCAACATGTTCTTCTTGTG+AGG | 0.554703 | 8.3:+12039650 | MS.gene58053:CDS |
| ATAGAAATATAGCGGAGGAT+AGG | 0.564378 | 8.3:-12039593 | None:intergenic |
| GGCATACTCCTGCTCTTGGA+TGG | 0.564573 | 8.3:+12036566 | MS.gene58053:CDS |
| GCACCGCCCTAATGGTGTAA+AGG | 0.570683 | 8.3:-12036516 | None:intergenic |
| TGCTGAAATTGTATATTCCA+AGG | 0.571019 | 8.3:+12036179 | MS.gene58053:CDS |
| AGATTGAAGTTAATTAAGCA+AGG | 0.571779 | 8.3:+12036243 | MS.gene58053:CDS |
| CCGCTATATTTCTATAGTGG+AGG | 0.600648 | 8.3:+12039601 | MS.gene58053:CDS |
| GATTGAAGTTAATTAAGCAA+GGG | 0.611023 | 8.3:+12036244 | MS.gene58053:CDS |
| TCATCTTCTAATGAACTGGA+AGG | 0.615316 | 8.3:+12036156 | MS.gene58053:CDS |
| CAGACTTGGATACCTTACAA+AGG | 0.621609 | 8.3:+12036364 | MS.gene58053:intron |
| AGCAGCGTAATCGCTGTCGT+CGG | 0.627659 | 8.3:-12035913 | None:intergenic |
| CGTAATCGCTGTCGTCGGAG+AGG | 0.638919 | 8.3:-12035908 | None:intergenic |
| ATCGATTATCACCATAAACA+AGG | 0.649905 | 8.3:-12036271 | None:intergenic |
| CGGATGTCAGGTCAATCAGG+AGG | 0.673482 | 8.3:+12036545 | MS.gene58053:CDS |
| CCACTATAGAAATATAGCGG+AGG | 0.673609 | 8.3:-12039598 | None:intergenic |
| CCTCCACTATAGAAATATAG+CGG | 0.683681 | 8.3:-12039601 | None:intergenic |
| ACCTTACAAAGGGCATAACG+CGG | 0.687799 | 8.3:+12036375 | MS.gene58053:CDS |
| AAACCTTTACACCATTAGGG+CGG | 0.720822 | 8.3:+12036513 | MS.gene58053:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTACTTTTTTGTTTA+TGG | - | chr8.3:12036943-12036962 | None:intergenic | 10.0% |
| !!! | TTAATTCTTTTGTAAATTTT+CGG | + | chr8.3:12036293-12036312 | MS.gene58053:intron | 10.0% |
| !! | AAAAAAGTAATATATGCATT+AGG | + | chr8.3:12036948-12036967 | MS.gene58053:intron | 15.0% |
| !! | AAAATGTGATATTAAACATT+TGG | - | chr8.3:12040312-12040331 | None:intergenic | 15.0% |
| !! | AGCTTATAAAAATATTATTC+AGG | - | chr8.3:12039932-12039951 | None:intergenic | 15.0% |
| !! | ATATATATATATATAGAGGA+GGG | + | chr8.3:12037384-12037403 | MS.gene58053:intron | 15.0% |
| !! | ATATATATATATATAGCACA+GGG | + | chr8.3:12038153-12038172 | MS.gene58053:intron | 15.0% |
| !! | GTTAATGTTATAATGAATAT+TGG | + | chr8.3:12038543-12038562 | MS.gene58053:intron | 15.0% |
| !! | TATATATATATATATAGAGG+AGG | + | chr8.3:12037383-12037402 | MS.gene58053:intron | 15.0% |
| !! | TATATATATATATATGAGGA+GGG | - | chr8.3:12038148-12038167 | None:intergenic | 15.0% |
| !! | TGAAATGAAATCATAATTAA+TGG | + | chr8.3:12038075-12038094 | MS.gene58053:intron | 15.0% |
| !! | TTAATTATGATTTCATTTCA+TGG | - | chr8.3:12038075-12038094 | None:intergenic | 15.0% |
| !! | TTATATCGATAAAAAAAATG+TGG | + | chr8.3:12038970-12038989 | MS.gene58053:intron | 15.0% |
| !! | TTTGAAAATTCATTCATATA+TGG | + | chr8.3:12040013-12040032 | MS.gene58053:intron | 15.0% |
| !!! | ACTCATATTTTCTAATAAAA+TGG | - | chr8.3:12037636-12037655 | None:intergenic | 15.0% |
| !!! | AGTAATGTTTAAAAAAGTAT+AGG | + | chr8.3:12038461-12038480 | MS.gene58053:intron | 15.0% |
| !!! | ATTTTTTTTATCGATATAAC+TGG | - | chr8.3:12038969-12038988 | None:intergenic | 15.0% |
| !!! | GATTTATTCAATAATTTTCT+TGG | - | chr8.3:12037859-12037878 | None:intergenic | 15.0% |
| !!! | TACAAAATATTTTGAAATAG+CGG | + | chr8.3:12038275-12038294 | MS.gene58053:intron | 15.0% |
| !! | AAAAATAAGCCATTTATTTG+AGG | + | chr8.3:12037971-12037990 | MS.gene58053:intron | 20.0% |
| !! | AACTTAACATAAATCACTAA+GGG | - | chr8.3:12038762-12038781 | None:intergenic | 20.0% |
| !! | AATCATAAGTTATTACCAAA+TGG | + | chr8.3:12037875-12037894 | MS.gene58053:intron | 20.0% |
| !! | AATCCAATTTCATTTCAATT+AGG | + | chr8.3:12035979-12035998 | MS.gene58053:intron | 20.0% |
| !! | AATTTGAATTGTTTGTGATT+AGG | + | chr8.3:12036089-12036108 | MS.gene58053:intron | 20.0% |
| !! | ATATGATGTTATACTAAATC+AGG | + | chr8.3:12036751-12036770 | MS.gene58053:intron | 20.0% |
| !! | ATCATAAGTTATTACCAAAT+GGG | + | chr8.3:12037876-12037895 | MS.gene58053:intron | 20.0% |
| !! | ATCCAATTTCATTTCAATTA+GGG | + | chr8.3:12035980-12035999 | MS.gene58053:intron | 20.0% |
| !! | ATTGTAGAAAACTGAATATA+AGG | - | chr8.3:12039536-12039555 | None:intergenic | 20.0% |
| !! | ATTGTTAAAAGTAACCTATA+GGG | + | chr8.3:12036887-12036906 | MS.gene58053:intron | 20.0% |
| !! | ATTTGAATTGTTTGTGATTA+GGG | + | chr8.3:12036090-12036109 | MS.gene58053:intron | 20.0% |
| !! | CATATATATATATATAGCAC+AGG | + | chr8.3:12038152-12038171 | MS.gene58053:intron | 20.0% |
| !! | CTATATATATATATATGAGG+AGG | - | chr8.3:12038149-12038168 | None:intergenic | 20.0% |
| !! | GATTTATGTTAAGTTCAATT+AGG | + | chr8.3:12038767-12038786 | MS.gene58053:intron | 20.0% |
| !! | GTGCTATATATATATATATG+AGG | - | chr8.3:12038152-12038171 | None:intergenic | 20.0% |
| !! | TAATTGCAAAAGTTCATAAT+TGG | - | chr8.3:12037593-12037612 | None:intergenic | 20.0% |
| !! | TATGATGTTATACTAAATCA+GGG | + | chr8.3:12036752-12036771 | MS.gene58053:intron | 20.0% |
| !! | TCAAATTCAATAAAAAGTTG+TGG | - | chr8.3:12037743-12037762 | None:intergenic | 20.0% |
| !! | TGAAAACAATCCAAATAAAT+GGG | + | chr8.3:12037564-12037583 | MS.gene58053:intron | 20.0% |
| !! | TGAATTGATATCACAATTAA+TGG | - | chr8.3:12037457-12037476 | None:intergenic | 20.0% |
| !! | TTAATTGTGATATCAATTCA+TGG | + | chr8.3:12037457-12037476 | MS.gene58053:intron | 20.0% |
| !! | TTATTCTCAATTACTATGAT+TGG | + | chr8.3:12040144-12040163 | MS.gene58053:intron | 20.0% |
| !! | TTGAAAGAAATTAAACATGT+AGG | - | chr8.3:12039695-12039714 | None:intergenic | 20.0% |
| !!! | AAATAAATGGCTTATTTTTC+TGG | - | chr8.3:12037970-12037989 | None:intergenic | 20.0% |
| !!! | ATTTTCTAATAAAATGGCTT+TGG | - | chr8.3:12037630-12037649 | None:intergenic | 20.0% |
| !!! | CAATAATATGTTGATTGTTT+CGG | + | chr8.3:12037792-12037811 | MS.gene58053:intron | 20.0% |
| !!! | CTTTATTTTTCAGTTTATCA+TGG | + | chr8.3:12036667-12036686 | MS.gene58053:intron | 20.0% |
| !!! | TAACTTTTTATACTTACTCT+AGG | - | chr8.3:12037421-12037440 | None:intergenic | 20.0% |
| !!! | TAATCTAGGTAATATTGATT+TGG | + | chr8.3:12039093-12039112 | MS.gene58053:intron | 20.0% |
| !!! | TTAGTGTTTTTATGTAATCT+AGG | + | chr8.3:12039079-12039098 | MS.gene58053:intron | 20.0% |
| ! | AAATGCACAAAAAATACAGT+TGG | - | chr8.3:12040223-12040242 | None:intergenic | 25.0% |
| ! | AACAAAAAAACTTCAACACT+TGG | - | chr8.3:12036475-12036494 | None:intergenic | 25.0% |
| ! | AACAATGAAGAGAATAACAA+GGG | - | chr8.3:12036873-12036892 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr8.3:12039298-12039317 | MS.gene58053:intron | 25.0% |
| ! | AACCCTAATTGAAATGAAAT+TGG | - | chr8.3:12035985-12036004 | None:intergenic | 25.0% |
| ! | AATCTATCTACTTATTCAGT+GGG | - | chr8.3:12037236-12037255 | None:intergenic | 25.0% |
| ! | AATGCACAAAAAATACAGTT+GGG | - | chr8.3:12040222-12040241 | None:intergenic | 25.0% |
| ! | AGATTGAAGTTAATTAAGCA+AGG | + | chr8.3:12036243-12036262 | MS.gene58053:CDS | 25.0% |
| ! | AGATTTGAATTGAATTGAAC+CGG | - | chr8.3:12036032-12036051 | None:intergenic | 25.0% |
| ! | ATAAAGTTGTGATATTTACC+TGG | + | chr8.3:12039744-12039763 | MS.gene58053:intron | 25.0% |
| ! | ATAATATGTCATCGAAGTAT+CGG | - | chr8.3:12039726-12039745 | None:intergenic | 25.0% |
| ! | ATCTAATTCACATGGATTTA+GGG | + | chr8.3:12036971-12036990 | MS.gene58053:intron | 25.0% |
| ! | ATGATGTTATACTAAATCAG+GGG | + | chr8.3:12036753-12036772 | MS.gene58053:intron | 25.0% |
| ! | CATAATTAATGGCTAAGATT+TGG | + | chr8.3:12038086-12038105 | MS.gene58053:intron | 25.0% |
| ! | CATTAATAACAGAACTTACA+TGG | - | chr8.3:12036721-12036740 | None:intergenic | 25.0% |
| ! | CATTGTTAAAAGTAACCTAT+AGG | + | chr8.3:12036886-12036905 | MS.gene58053:intron | 25.0% |
| ! | GAACTTAACATAAATCACTA+AGG | - | chr8.3:12038763-12038782 | None:intergenic | 25.0% |
| ! | GAGTAAAGAATTTAATCAAC+TGG | + | chr8.3:12037001-12037020 | MS.gene58053:intron | 25.0% |
| ! | GATTGAAGTTAATTAAGCAA+GGG | + | chr8.3:12036244-12036263 | MS.gene58053:CDS | 25.0% |
| ! | GTCTTTGATTATGAATACTT+TGG | + | chr8.3:12039972-12039991 | MS.gene58053:intron | 25.0% |
| ! | GTGAAAACAATCCAAATAAA+TGG | + | chr8.3:12037563-12037582 | MS.gene58053:intron | 25.0% |
| ! | TAAAAAGTTACTCCAAATCT+TGG | + | chr8.3:12037431-12037450 | MS.gene58053:intron | 25.0% |
| ! | TAAAGTTGTGATATTTACCT+GGG | + | chr8.3:12039745-12039764 | MS.gene58053:intron | 25.0% |
| ! | TAACAATGAAGAGAATAACA+AGG | - | chr8.3:12036874-12036893 | None:intergenic | 25.0% |
| ! | TAACTCTTTATACTTACTCT+TGG | + | chr8.3:12038111-12038130 | MS.gene58053:intron | 25.0% |
| ! | TAATTGGATACCCATTTATT+TGG | - | chr8.3:12037577-12037596 | None:intergenic | 25.0% |
| ! | TCGTATAGTTGTATTATATC+AGG | + | chr8.3:12039830-12039849 | MS.gene58053:intron | 25.0% |
| ! | TGAAAAAGGTTTCTTTAAGT+AGG | + | chr8.3:12038369-12038388 | MS.gene58053:intron | 25.0% |
| ! | TGTGGATCTATTATTGTTTA+AGG | + | chr8.3:12037921-12037940 | MS.gene58053:intron | 25.0% |
| !! | CACTACTTTGTTTGTATTAT+TGG | + | chr8.3:12036061-12036080 | MS.gene58053:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr8.3:12039281-12039300 | None:intergenic | 25.0% |
| !! | TACTCTGAAAATCATTTACT+AGG | - | chr8.3:12040385-12040404 | None:intergenic | 25.0% |
| !! | TGTGAATAAAATCTTTTTGC+AGG | + | chr8.3:12039565-12039584 | MS.gene58053:intron | 25.0% |
| !! | TGTTGTAGGTAATATTGATT+TGG | + | chr8.3:12039429-12039448 | MS.gene58053:intron | 25.0% |
| !! | TTTAAAAAAGTATAGGACGA+GGG | + | chr8.3:12038468-12038487 | MS.gene58053:intron | 25.0% |
| !!! | AATTGGATTTTGAAGTGAAA+AGG | - | chr8.3:12035968-12035987 | None:intergenic | 25.0% |
| !!! | GATGATTTTCTAAGATTCAT+AGG | + | chr8.3:12037898-12037917 | MS.gene58053:intron | 25.0% |
| !!! | GGAAAAGTGTTGTTATATAA+CGG | + | chr8.3:12038189-12038208 | MS.gene58053:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr8.3:12039156-12039175 | MS.gene58053:intron | 25.0% |
| !!! | TTTTGCTTTGTTTAAGAAGA+AGG | - | chr8.3:12037526-12037545 | None:intergenic | 25.0% |
| AAGCATAGTATATAGAATGC+TGG | + | chr8.3:12037260-12037279 | MS.gene58053:intron | 30.0% | |
| ACAATGAAGAGAATAACAAG+GGG | - | chr8.3:12036872-12036891 | None:intergenic | 30.0% | |
| AGAGCTTATTAACAGTACAA+TGG | - | chr8.3:12037155-12037174 | None:intergenic | 30.0% | |
| ATAAGATGTGTGTGTATGTT+TGG | + | chr8.3:12039455-12039474 | MS.gene58053:intron | 30.0% | |
| ATAGAAGTGAAATACTACCT+TGG | + | chr8.3:12036803-12036822 | MS.gene58053:intron | 30.0% | |
| ATCGATTATCACCATAAACA+AGG | - | chr8.3:12036274-12036293 | None:intergenic | 30.0% | |
| ATGAATCTGCCTCAAATAAA+TGG | - | chr8.3:12037983-12038002 | None:intergenic | 30.0% | |
| ATGAATTGCAACATTATCCT+TGG | - | chr8.3:12036199-12036218 | None:intergenic | 30.0% | |
| ATTATCATGTTCTCTCTGTA+TGG | + | chr8.3:12036830-12036849 | MS.gene58053:intron | 30.0% | |
| ATTGTGATTGTGATTCAATC+CGG | + | chr8.3:12036010-12036029 | MS.gene58053:intron | 30.0% | |
| ATTTAATCAGTCTGCACTAA+AGG | - | chr8.3:12037669-12037688 | None:intergenic | 30.0% | |
| CAATCTATCTACTTATTCAG+TGG | - | chr8.3:12037237-12037256 | None:intergenic | 30.0% | |
| GATCTAATTCACATGGATTT+AGG | + | chr8.3:12036970-12036989 | MS.gene58053:intron | 30.0% | |
| GCTGCATTTAATTGTTGAAT+TGG | + | chr8.3:12039013-12039032 | MS.gene58053:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr8.3:12039338-12039357 | None:intergenic | 30.0% | |
| GTTGTATTATATCAGGATTC+AGG | + | chr8.3:12039837-12039856 | MS.gene58053:intron | 30.0% | |
| TAGAAGTGAAATACTACCTT+GGG | + | chr8.3:12036804-12036823 | MS.gene58053:intron | 30.0% | |
| TATATAGAATGCTGGAAACT+AGG | + | chr8.3:12037268-12037287 | MS.gene58053:intron | 30.0% | |
| TCATTCATATATGGCTTCTA+TGG | + | chr8.3:12040022-12040041 | MS.gene58053:intron | 30.0% | |
| TCTTAGAAAATCATCCCATT+TGG | - | chr8.3:12037893-12037912 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr8.3:12039345-12039364 | MS.gene58053:intron | 30.0% | |
| TGCTGAAATTGTATATTCCA+AGG | + | chr8.3:12036179-12036198 | MS.gene58053:CDS | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr8.3:12039342-12039361 | MS.gene58053:intron | 30.0% | |
| TGTGTAATTTATGTGATGCA+TGG | + | chr8.3:12038426-12038445 | MS.gene58053:intron | 30.0% | |
| TGTTTGGTTGTTTATGAAGA+AGG | + | chr8.3:12038006-12038025 | MS.gene58053:intron | 30.0% | |
| TTTGCAAACCAAGTATGTAT+TGG | + | chr8.3:12037292-12037311 | MS.gene58053:intron | 30.0% | |
| TTTGTTTAAGAAGAAGGAGT+AGG | - | chr8.3:12037520-12037539 | None:intergenic | 30.0% | |
| ! | AAGGTAGTTTGCATTTATAG+TGG | + | chr8.3:12036416-12036435 | MS.gene58053:intron | 30.0% |
| ! | ATGTTTTATGTTCTACGAGA+AGG | + | chr8.3:12040175-12040194 | MS.gene58053:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr8.3:12039303-12039322 | None:intergenic | 30.0% |
| ! | GATAATGGTTTGTCTGATAA+AGG | + | chr8.3:12036397-12036416 | MS.gene58053:CDS | 30.0% |
| ! | GCACAGGGAAATTTTATAAA+TGG | + | chr8.3:12038168-12038187 | MS.gene58053:intron | 30.0% |
| ! | GTTTAAAAAAGTATAGGACG+AGG | + | chr8.3:12038467-12038486 | MS.gene58053:intron | 30.0% |
| ! | TACATGGTTGATACATATCA+GGG | - | chr8.3:12036705-12036724 | None:intergenic | 30.0% |
| ! | TAGTGTTTTATGTTAAGTCC+TGG | + | chr8.3:12038630-12038649 | MS.gene58053:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr8.3:12039152-12039171 | None:intergenic | 30.0% |
| ! | TTACATGGTTGATACATATC+AGG | - | chr8.3:12036706-12036725 | None:intergenic | 30.0% |
| ! | TTGTTTATGGTGTTAACCTT+TGG | - | chr8.3:12036930-12036949 | None:intergenic | 30.0% |
| ! | TTTATTTGAGGCAGATTCAT+AGG | + | chr8.3:12037983-12038002 | MS.gene58053:intron | 30.0% |
| ! | TTTGCCAACTTGCTTATTAA+GGG | - | chr8.3:12037188-12037207 | None:intergenic | 30.0% |
| !! | AAACATGTAGGCATTGAAAT+CGG | - | chr8.3:12039683-12039702 | None:intergenic | 30.0% |
| !! | TTTTGCCAACTTGCTTATTA+AGG | - | chr8.3:12037189-12037208 | None:intergenic | 30.0% |
| !!! | GGTGACACTATTTATTTTGA+TGG | + | chr8.3:12039476-12039495 | MS.gene58053:intron | 30.0% |
| !!! | TTTTCTAAGATTCATAGGTG+TGG | + | chr8.3:12037903-12037922 | MS.gene58053:intron | 30.0% |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr8.3:12039226-12039245 | MS.gene58053:intron | 35.0% | |
| AAGCTCATCTTCTAATGAAC+TGG | + | chr8.3:12036152-12036171 | MS.gene58053:CDS | 35.0% | |
| ACAGAAACCTTTACACCATT+AGG | + | chr8.3:12036509-12036528 | MS.gene58053:CDS | 35.0% | |
| AGAAGGAGTAGGAAATCTTA+TGG | + | chr8.3:12038023-12038042 | MS.gene58053:intron | 35.0% | |
| AGAAGGAGTAGGAAATCTTA+TGG | - | chr8.3:12038042-12038023 | None:intergenic | 35.0% | |
| AGACTTGGATACCTTACAAA+GGG | + | chr8.3:12036365-12036384 | MS.gene58053:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr8.3:12039310-12039329 | MS.gene58053:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr8.3:12039145-12039164 | MS.gene58053:intron | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr8.3:12038657-12038676 | MS.gene58053:intron | 35.0% | |
| ATACTTACTCTTGGAGTCAA+TGG | + | chr8.3:12038120-12038139 | MS.gene58053:intron | 35.0% | |
| CAATGAAGAGAATAACAAGG+GGG | - | chr8.3:12036871-12036890 | None:intergenic | 35.0% | |
| CACAATTAATGGCCAAGATT+TGG | - | chr8.3:12037446-12037465 | None:intergenic | 35.0% | |
| CAGAAACCTTTACACCATTA+GGG | + | chr8.3:12036510-12036529 | MS.gene58053:CDS | 35.0% | |
| CCTCCACTATAGAAATATAG+CGG | - | chr8.3:12039604-12039623 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr8.3:12038662-12038681 | MS.gene58053:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr8.3:12039170-12039189 | MS.gene58053:intron | 35.0% | |
| GAGTAGGAAATCTTATGGTA+GGG | + | chr8.3:12038028-12038047 | MS.gene58053:intron | 35.0% | |
| GAGTAGGAAATCTTATGGTA+GGG | - | chr8.3:12038047-12038028 | None:intergenic | 35.0% | |
| GCATTAGGATCTAATTCACA+TGG | + | chr8.3:12036963-12036982 | MS.gene58053:intron | 35.0% | |
| GGAGAAATTTAACAACACAC+AGG | - | chr8.3:12040201-12040220 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr8.3:12039223-12039242 | MS.gene58053:intron | 35.0% | |
| GTTATACTAAATCAGGGGTA+GGG | + | chr8.3:12036758-12036777 | MS.gene58053:intron | 35.0% | |
| GTTGTTTATGAAGAAGGAGT+AGG | + | chr8.3:12038012-12038031 | MS.gene58053:intron | 35.0% | |
| TCATCTTCTAATGAACTGGA+AGG | + | chr8.3:12036156-12036175 | MS.gene58053:CDS | 35.0% | |
| TGCTAGGTATTTCAGAAATC+CGG | - | chr8.3:12038919-12038938 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr8.3:12039165-12039184 | MS.gene58053:intron | 35.0% | |
| TGTTATACTAAATCAGGGGT+AGG | + | chr8.3:12036757-12036776 | MS.gene58053:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr8.3:12039222-12039241 | None:intergenic | 35.0% | |
| TTTACTGCTCTGTGAAATTC+AGG | + | chr8.3:12036449-12036468 | MS.gene58053:intron | 35.0% | |
| ! | AAAACATTGCAGAGTGGTTT+TGG | - | chr8.3:12038842-12038861 | None:intergenic | 35.0% |
| ! | ATACTTACTCTAGGAGTCAA+TGG | - | chr8.3:12037412-12037431 | None:intergenic | 35.0% |
| ! | ATAGAAATATAGCGGAGGAT+AGG | - | chr8.3:12039596-12039615 | None:intergenic | 35.0% |
| ! | ATCATTGTTGTTCTATCGTC+AGG | + | chr8.3:12036595-12036614 | MS.gene58053:CDS | 35.0% |
| ! | ATTATTTTCGCTTGCAGACT+TGG | + | chr8.3:12036350-12036369 | MS.gene58053:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr8.3:12039322-12039341 | MS.gene58053:intron | 35.0% |
| ! | CATTAGAAGATGAGCTTTGT+TGG | - | chr8.3:12036149-12036168 | None:intergenic | 35.0% |
| ! | GGCTTCTATGGTATTTTTCA+TGG | + | chr8.3:12040034-12040053 | MS.gene58053:intron | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+AGG | + | chr8.3:12039409-12039428 | MS.gene58053:intron | 35.0% |
| !! | AAGCACTGATGCAAAAGAAA+AGG | - | chr8.3:12038867-12038886 | None:intergenic | 35.0% |
| !! | CACTTGTTTCTACTCTTGAT+CGG | + | chr8.3:12038937-12038956 | MS.gene58053:intron | 35.0% |
| !! | CATGTTGCTTTATTGTAGCA+AGG | - | chr8.3:12039639-12039658 | None:intergenic | 35.0% |
| !!! | ATTTTTCTGGAATGTGTCGT+TGG | - | chr8.3:12037957-12037976 | None:intergenic | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr8.3:12038662-12038681 | None:intergenic | 35.0% |
| AAAAGCTACTCGAGTCATGA+TGG | - | chr8.3:12040277-12040296 | None:intergenic | 40.0% | |
| AAACCTTTACACCATTAGGG+CGG | + | chr8.3:12036513-12036532 | MS.gene58053:CDS | 40.0% | |
| AACCAATAACTTCCAGTTGC+CGG | + | chr8.3:12038897-12038916 | MS.gene58053:intron | 40.0% | |
| AAGGCAAAAACATTGCAGAG+TGG | - | chr8.3:12038848-12038867 | None:intergenic | 40.0% | |
| AAGTGAAATACTACCTTGGG+TGG | + | chr8.3:12036807-12036826 | MS.gene58053:intron | 40.0% | |
| ACAAGTTCCTTTACAAGGAC+AGG | + | chr8.3:12040112-12040131 | MS.gene58053:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr8.3:12039120-12039139 | MS.gene58053:intron | 40.0% | |
| AGAACATGATAATCCACCCA+AGG | - | chr8.3:12036823-12036842 | None:intergenic | 40.0% | |
| AGAGAGAGCCAATACATACT+TGG | - | chr8.3:12037303-12037322 | None:intergenic | 40.0% | |
| AGCAACATGTTCTTCTTGTG+AGG | + | chr8.3:12039650-12039669 | MS.gene58053:CDS | 40.0% | |
| AGCTCCCTTAATAAGCAAGT+TGG | + | chr8.3:12037181-12037200 | MS.gene58053:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr8.3:12039251-12039270 | MS.gene58053:intron | 40.0% | |
| ATAAATCACTAAGGGCAACC+CGG | - | chr8.3:12038754-12038773 | None:intergenic | 40.0% | |
| ATATATTGCCATCCAAGAGC+AGG | - | chr8.3:12036577-12036596 | None:intergenic | 40.0% | |
| ATTGACCTGACATCCGTAAA+CGG | - | chr8.3:12036541-12036560 | None:intergenic | 40.0% | |
| CAAAAGCAACGATGATACAC+AGG | + | chr8.3:12037541-12037560 | MS.gene58053:intron | 40.0% | |
| CAAGAGTAGAAACAAGTGCT+AGG | - | chr8.3:12038935-12038954 | None:intergenic | 40.0% | |
| CAGACTTGGATACCTTACAA+AGG | + | chr8.3:12036364-12036383 | MS.gene58053:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr8.3:12038656-12038675 | MS.gene58053:intron | 40.0% | |
| CCACTAATAGCAAACTGAGT+TGG | - | chr8.3:12036222-12036241 | None:intergenic | 40.0% | |
| CCACTATAGAAATATAGCGG+AGG | - | chr8.3:12039601-12039620 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8.3:12038688-12038707 | MS.gene58053:intron | 40.0% | |
| GAAAATGCCTGTCCTTGTAA+AGG | - | chr8.3:12040122-12040141 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr8.3:12039119-12039138 | MS.gene58053:intron | 40.0% | |
| GATGGACAACACTGTGAAAA+AGG | + | chr8.3:12038355-12038374 | MS.gene58053:intron | 40.0% | |
| GGAGTAGGAAATCTTATGGT+AGG | + | chr8.3:12038027-12038046 | MS.gene58053:intron | 40.0% | |
| GGAGTAGGAAATCTTATGGT+AGG | - | chr8.3:12038046-12038027 | None:intergenic | 40.0% | |
| GTACGACAAGTTCCTTTACA+AGG | + | chr8.3:12040107-12040126 | MS.gene58053:intron | 40.0% | |
| TATTTCAGAAATCCGGCAAC+TGG | - | chr8.3:12038912-12038931 | None:intergenic | 40.0% | |
| TCATGTTCTCTCTGTATGGT+AGG | + | chr8.3:12036834-12036853 | MS.gene58053:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr8.3:12039118-12039137 | MS.gene58053:intron | 40.0% | |
| TTATGTGATGCATGGATGCA+AGG | + | chr8.3:12038434-12038453 | MS.gene58053:intron | 40.0% | |
| TTGTACTAAATAGCGTGTCG+CGG | - | chr8.3:12038260-12038279 | None:intergenic | 40.0% | |
| ! | CCGCTATATTTCTATAGTGG+AGG | + | chr8.3:12039601-12039620 | MS.gene58053:CDS | 40.0% |
| ! | CCTCCGCTATATTTCTATAG+TGG | + | chr8.3:12039598-12039617 | MS.gene58053:CDS | 40.0% |
| ! | GATTTTCAGAGTACACTGCA+GGG | + | chr8.3:12040392-12040411 | MS.gene58053:CDS | 40.0% |
| ! | TGATTTTCAGAGTACACTGC+AGG | + | chr8.3:12040391-12040410 | MS.gene58053:CDS | 40.0% |
| ! | TGGGAATTGAGAAAGCATGT+GGG | + | chr8.3:12039764-12039783 | MS.gene58053:intron | 40.0% |
| ! | TGTTAACCTTTGGTTTCCAG+TGG | - | chr8.3:12036920-12036939 | None:intergenic | 40.0% |
| !! | CCAACTCAGTTTGCTATTAG+TGG | + | chr8.3:12036219-12036238 | MS.gene58053:CDS | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | - | chr8.3:12039392-12039411 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr8.3:12039235-12039254 | MS.gene58053:intron | 45.0% | |
| ATCCGGCAACTGGAAGTTAT+TGG | - | chr8.3:12038902-12038921 | None:intergenic | 45.0% | |
| CACATGCTTTCTCAATTCCC+AGG | - | chr8.3:12039765-12039784 | None:intergenic | 45.0% | |
| CAGGGGTAGGGATTTATATG+TGG | + | chr8.3:12036770-12036789 | MS.gene58053:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr8.3:12039121-12039140 | MS.gene58053:intron | 45.0% | |
| CTATTTACTGCGATCCACGA+TGG | + | chr8.3:12038337-12038356 | MS.gene58053:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr8.3:12039245-12039264 | MS.gene58053:intron | 45.0% | |
| GAGGCAGATTCATAGGTGTT+TGG | + | chr8.3:12037990-12038009 | MS.gene58053:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8.3:12038687-12038706 | MS.gene58053:intron | 45.0% | |
| GCTATAGCACTGTTGTGTAG+TGG | + | chr8.3:12038299-12038318 | MS.gene58053:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr8.3:12038684-12038703 | MS.gene58053:intron | 45.0% | |
| GGCTAGACGTTATGATGTGA+TGG | - | chr8.3:12039911-12039930 | None:intergenic | 45.0% | |
| GGGCAGTTACAGTTCAGAAA+GGG | + | chr8.3:12039785-12039804 | MS.gene58053:intron | 45.0% | |
| TTACGGATGTCAGGTCAATC+AGG | + | chr8.3:12036542-12036561 | MS.gene58053:CDS | 45.0% | |
| TTTCACAGTGTTGTCCATCG+TGG | - | chr8.3:12038354-12038373 | None:intergenic | 45.0% | |
| ! | AAAGGGCATAACGCGGATAA+TGG | + | chr8.3:12036382-12036401 | MS.gene58053:CDS | 45.0% |
| ! | ACCTTACAAAGGGCATAACG+CGG | + | chr8.3:12036375-12036394 | MS.gene58053:CDS | 45.0% |
| ! | CTGGGAATTGAGAAAGCATG+TGG | + | chr8.3:12039763-12039782 | MS.gene58053:intron | 45.0% |
| ! | GCAAGGGACTTCCTTGTTTA+TGG | + | chr8.3:12036260-12036279 | MS.gene58053:CDS | 45.0% |
| ! | GGGAATTGAGAAAGCATGTG+GGG | + | chr8.3:12039765-12039784 | MS.gene58053:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8.3:12038651-12038670 | None:intergenic | 45.0% |
| !!! | CATTGCAGAGTGGTTTTGGT+AGG | - | chr8.3:12038838-12038857 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+AGG | + | chr8.3:12037380-12037399 | MS.gene58053:intron | 5.0% |
| !!! | TTTGAAATATATTATTTAAA+AGG | - | chr8.3:12038587-12038606 | None:intergenic | 5.0% |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr8.3:12039391-12039410 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr8.3:12039393-12039412 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8.3:12039387-12039406 | None:intergenic | 50.0% | |
| GCTATAGCGCTATTGCACTG+TGG | + | chr8.3:12038211-12038230 | MS.gene58053:intron | 50.0% | |
| GGGGCAGTTACAGTTCAGAA+AGG | + | chr8.3:12039784-12039803 | MS.gene58053:intron | 50.0% | |
| TCCGCGTTATGCCCTTTGTA+AGG | - | chr8.3:12036379-12036398 | None:intergenic | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr8.3:12039213-12039232 | None:intergenic | 50.0% | |
| ! | ACCTTTGGTTTCCAGTGGAG+AGG | - | chr8.3:12036915-12036934 | None:intergenic | 50.0% |
| ! | CCTTTGGTTTCCAGTGGAGA+GGG | - | chr8.3:12036914-12036933 | None:intergenic | 50.0% |
| ! | CTTTGGTTTCCAGTGGAGAG+GGG | - | chr8.3:12036913-12036932 | None:intergenic | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr8.3:12038728-12038747 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr8.3:12039379-12039398 | None:intergenic | 55.0% | |
| AGCAGCGTAATCGCTGTCGT+CGG | - | chr8.3:12035916-12035935 | None:intergenic | 55.0% | |
| AGCGTGTCGCGGAACAATAG+AGG | - | chr8.3:12038249-12038268 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr8.3:12039378-12039397 | MS.gene58053:intron | 55.0% | |
| CCCTCTCCACTGGAAACCAA+AGG | + | chr8.3:12036911-12036930 | MS.gene58053:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr8.3:12039385-12039404 | MS.gene58053:intron | 55.0% | |
| CGGATGTCAGGTCAATCAGG+AGG | + | chr8.3:12036545-12036564 | MS.gene58053:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr8.3:12038727-12038746 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr8.3:12039212-12039231 | None:intergenic | 55.0% | |
| GCACCGCCCTAATGGTGTAA+AGG | - | chr8.3:12036519-12036538 | None:intergenic | 55.0% | |
| GGCATACTCCTGCTCTTGGA+TGG | + | chr8.3:12036566-12036585 | MS.gene58053:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr8.3:12039379-12039398 | MS.gene58053:intron | 55.0% | |
| ! | AGGAGGCATACTCCTGCTCT+TGG | + | chr8.3:12036562-12036581 | MS.gene58053:CDS | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr8.3:12038732-12038751 | MS.gene58053:intron | 55.0% |
| !! | CATTAGGGCGGTGCCGTTTA+CGG | + | chr8.3:12036525-12036544 | MS.gene58053:CDS | 55.0% |
| CGTAAACGGCACCGCCCTAA+TGG | - | chr8.3:12036527-12036546 | None:intergenic | 60.0% | |
| CGTAATCGCTGTCGTCGGAG+AGG | - | chr8.3:12035911-12035930 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8.3:12038700-12038719 | MS.gene58053:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr8.3:12038733-12038752 | MS.gene58053:intron | 60.0% |
| !! | CGGTGCCGTTTACGGATGTC+AGG | + | chr8.3:12036533-12036552 | MS.gene58053:CDS | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr8.3:12038715-12038734 | None:intergenic | 65.0% | |
| CCAGTGGAGAGGGGCCCTAT+AGG | - | chr8.3:12036904-12036923 | None:intergenic | 65.0% | |
| CCTATAGGGCCCCTCTCCAC+TGG | + | chr8.3:12036901-12036920 | MS.gene58053:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8.3:12038702-12038721 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr8.3:12038715-12038734 | MS.gene58053:intron | 65.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr8.3:12039202-12039221 | MS.gene58053:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr8.3:12038716-12038735 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr8.3:12038716-12038735 | MS.gene58053:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr8.3:12038717-12038736 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr8.3:12038721-12038740 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr8.3:12038722-12038741 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12035885 | 12040412 | 12035885 | ID=MS.gene58053 |
| chr8.3 | mRNA | 12035885 | 12040412 | 12035885 | ID=MS.gene58053.t1;Parent=MS.gene58053 |
| chr8.3 | exon | 12035885 | 12035950 | 12035885 | ID=MS.gene58053.t1.exon1;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12035885 | 12035950 | 12035885 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| chr8.3 | exon | 12036132 | 12036281 | 12036132 | ID=MS.gene58053.t1.exon2;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12036132 | 12036281 | 12036132 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| chr8.3 | exon | 12036367 | 12036418 | 12036367 | ID=MS.gene58053.t1.exon3;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12036367 | 12036418 | 12036367 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| chr8.3 | exon | 12036509 | 12036616 | 12036509 | ID=MS.gene58053.t1.exon4;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12036509 | 12036616 | 12036509 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| chr8.3 | exon | 12039587 | 12039671 | 12039587 | ID=MS.gene58053.t1.exon5;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12039587 | 12039671 | 12039587 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| chr8.3 | exon | 12040358 | 12040412 | 12040358 | ID=MS.gene58053.t1.exon6;Parent=MS.gene58053.t1 |
| chr8.3 | CDS | 12040358 | 12040412 | 12040358 | ID=cds.MS.gene58053.t1;Parent=MS.gene58053.t1 |
| Gene Sequence |
| Protein sequence |
