AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59487

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59487.t1 MTR_5g022470 97.842 1112 24 0 1 1112 88 1199 0.0 2272
MS.gene59487.t1 MTR_5g022470 97.699 1043 24 0 1 1043 88 1130 0.0 2129
MS.gene59487.t1 MTR_8g075340 74.386 1140 231 13 1 1113 65 1170 0.0 1670
MS.gene59487.t1 MTR_1g087140 32.898 383 215 10 334 686 301 671 1.29e-40 163
MS.gene59487.t1 MTR_1g087140 32.237 152 79 4 946 1096 956 1084 4.73e-15 80.9
MS.gene59487.t1 MTR_1g090850 31.593 383 234 7 321 685 280 652 3.23e-40 162
MS.gene59487.t1 MTR_1g090850 38.129 139 63 5 958 1096 921 1036 6.88e-16 83.6
MS.gene59487.t1 MTR_8g080770 33.131 329 196 6 375 686 236 557 4.32e-38 154
MS.gene59487.t1 MTR_8g080770 34.722 144 62 2 960 1097 729 846 6.97e-18 89.7
MS.gene59487.t1 MTR_3g085130 31.804 327 201 6 378 686 193 515 4.69e-38 154
MS.gene59487.t1 MTR_3g085130 34.932 146 64 2 957 1097 690 809 1.05e-16 85.9
MS.gene59487.t1 MTR_8g080770 34.062 320 187 6 375 677 345 657 4.94e-38 155
MS.gene59487.t1 MTR_8g080770 34.722 144 62 2 960 1097 838 955 6.46e-18 90.1
MS.gene59487.t1 MTR_3g085130 32.704 318 192 6 378 677 403 716 2.01e-37 153
MS.gene59487.t1 MTR_3g085130 34.932 146 64 2 957 1097 900 1019 1.32e-16 85.9
MS.gene59487.t1 MTR_8g106150 33.036 336 191 7 375 677 336 670 1.02e-35 147
MS.gene59487.t1 MTR_8g106150 31.953 169 74 4 960 1113 858 1000 2.12e-15 82.0
MS.gene59487.t1 MTR_8g106150 33.036 336 191 7 375 677 93 427 1.27e-35 146
MS.gene59487.t1 MTR_8g106150 31.953 169 74 4 960 1113 615 757 1.53e-15 82.0
MS.gene59487.t1 MTR_7g109150 33.721 258 145 4 412 667 334 567 8.26e-32 133
MS.gene59487.t1 MTR_5g097410 30.982 326 191 6 377 677 572 888 8.42e-32 135
MS.gene59487.t1 MTR_5g097410 30.994 171 68 4 951 1097 1056 1200 2.02e-13 75.5
MS.gene59487.t1 MTR_4g031150 32.210 267 154 5 412 676 383 624 3.50e-29 126
MS.gene59487.t1 MTR_3g105590 30.822 292 153 6 425 683 373 648 1.28e-25 115
MS.gene59487.t1 MTR_1g013360 28.990 307 168 6 425 683 379 683 5.93e-24 109
MS.gene59487.t1 MTR_7g116330 24.924 329 216 6 411 733 364 667 5.47e-14 77.0
MS.gene59487.t1 MTR_1g073840 31.655 139 94 1 412 550 355 492 2.87e-12 71.6
MS.gene59487.t1 MTR_8g019680 52.381 63 26 2 1034 1096 79 137 6.84e-12 65.1
MS.gene59487.t1 MTR_1g079790 23.873 377 233 11 411 771 360 698 3.06e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59487.t1 AT2G17820 65.873 1134 344 11 1 1112 87 1199 0.0 1508
MS.gene59487.t1 AT2G47430 28.674 837 466 24 346 1097 318 1108 2.51e-73 265
MS.gene59487.t1 AT1G27320 34.036 332 209 4 372 694 400 730 8.01e-42 167
MS.gene59487.t1 AT1G27320 32.051 156 62 2 960 1097 887 1016 7.23e-15 80.5
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 431 758 1.53e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 939 1073 5.95e-17 87.0
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 408 735 1.54e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 916 1050 7.46e-17 86.7
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 408 735 1.54e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 916 1050 7.46e-17 86.7
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 408 735 1.54e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 916 1050 7.46e-17 86.7
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 408 735 1.54e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 916 1050 7.46e-17 86.7
MS.gene59487.t1 AT2G01830 32.727 330 195 6 381 685 420 747 2.08e-41 166
MS.gene59487.t1 AT2G01830 33.540 161 75 2 957 1111 928 1062 7.83e-17 86.7
MS.gene59487.t1 AT5G35750 26.504 532 313 13 375 871 540 1028 1.01e-38 157
MS.gene59487.t1 AT5G35750 28.313 166 75 2 964 1111 1036 1175 8.12e-15 80.1
MS.gene59487.t1 AT1G66340 32.453 265 152 5 412 676 333 570 1.70e-32 136
MS.gene59487.t1 AT5G10720 32.819 259 157 4 425 683 369 610 4.57e-29 126
MS.gene59487.t1 AT2G40940 31.884 276 158 5 396 665 313 564 1.36e-28 123
MS.gene59487.t1 AT3G04580 33.553 152 72 4 955 1105 634 757 2.25e-13 75.1
MS.gene59487.t1 AT3G04580 25.806 341 211 12 410 733 355 670 8.64e-12 70.1
MS.gene59487.t1 AT3G04580 33.553 152 72 4 955 1105 634 757 2.25e-13 75.1
MS.gene59487.t1 AT3G04580 25.806 341 211 12 410 733 355 670 8.64e-12 70.1

Find 175 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACGAAGCTCCGTCTTTA+TGG 0.118108 5.4:-13938470 None:intergenic
TTAAATCCTTCAAGATTTAT+TGG 0.172560 5.4:-13938277 None:intergenic
TCATCGGTTAACTTTAAAAT+TGG 0.200671 5.4:-13938700 None:intergenic
AACTTCCTTCACAAGTATTT+TGG 0.220256 5.4:+13938403 MS.gene59487:CDS
CCGTCTTCTTAACAACATAT+TGG 0.249014 5.4:+13936072 MS.gene59487:CDS
GAGTCACCTCTAACTAATTT+TGG 0.254567 5.4:-13936633 None:intergenic
TTCTTCTAATAAAAGTATTA+TGG 0.254759 5.4:+13934496 MS.gene59487:CDS
GTTGCAACCCTTTGAATTAC+TGG 0.261968 5.4:-13938901 None:intergenic
GCCAATTGACTTCAAGCTTA+TGG 0.265808 5.4:+13939679 MS.gene59487:CDS
GCTTGCACTACAAGGCAATA+TGG 0.271450 5.4:+13938108 MS.gene59487:CDS
GAGTGGTTGCAGAGAACTTA+TGG 0.273458 5.4:+13934731 MS.gene59487:CDS
TTCGGCAGCTTTACCTGTTT+GGG 0.279753 5.4:+13934472 MS.gene59487:CDS
TTTCGGCAGCTTTACCTGTT+TGG 0.281134 5.4:+13934471 MS.gene59487:CDS
ACACCTATGGCAGCAGTAAT+TGG 0.293817 5.4:+13935959 MS.gene59487:CDS
CTCTTTGCATGACTTGCATT+TGG 0.297699 5.4:-13936987 None:intergenic
TCAATATGATTTGATCCTAA+TGG 0.301867 5.4:+13939083 MS.gene59487:CDS
AAGGAAGTCTCTTCAAGTTT+AGG 0.303079 5.4:-13934838 None:intergenic
GCCTCATATCCATCCATCTT+TGG 0.303088 5.4:-13939527 None:intergenic
TGAACCTCACGAGTTGAATT+AGG 0.322157 5.4:-13934764 None:intergenic
CATGCCAACCTTAAGGCATT+TGG 0.328149 5.4:-13939639 None:intergenic
TGTCCCATGATATACTTTCT+TGG 0.328708 5.4:-13935437 None:intergenic
GGACTATCGTTGCAAGAGTT+TGG 0.330068 5.4:-13936909 None:intergenic
AGTGGATGCTCTTAATTATA+TGG 0.332374 5.4:+13938981 MS.gene59487:CDS
TTGCAACACAAGCTTATGAT+AGG 0.334949 5.4:+13938803 MS.gene59487:CDS
TTGACTTAAGCACAGATATA+TGG 0.337006 5.4:+13938368 MS.gene59487:CDS
GTAATGTTAGCCATCTTGAT+AGG 0.342025 5.4:+13933183 None:intergenic
AGAAATCACTTGAGGGGTTA+AGG 0.349957 5.4:+13938857 MS.gene59487:CDS
GCTTACAGTCTAGTAGTTGA+TGG 0.352312 5.4:-13937225 None:intergenic
AGAAATCAAGGTTACCAAAA+AGG 0.359146 5.4:+13937848 MS.gene59487:CDS
AGCAGGACTTTCACAAGTTC+CGG 0.361656 5.4:+13934394 MS.gene59487:CDS
TATGTACATTTCTAGGTTGT+TGG 0.363384 5.4:-13939728 None:intergenic
TACAGATTCGCCTTTGCTTT+CGG 0.364558 5.4:+13934454 MS.gene59487:CDS
TGTGAAATGCCATGTTAATA+TGG 0.365711 5.4:-13933214 None:intergenic
AACCGATGAAAATGAACATT+TGG 0.389298 5.4:+13938714 MS.gene59487:CDS
ACCATAAGCTTGAAGTCAAT+TGG 0.402673 5.4:-13939680 None:intergenic
CCCTTTCAACTCATCAAGCT+TGG 0.402852 5.4:+13934252 MS.gene59487:CDS
GCTATGTTGATCAAATCTTC+TGG 0.404417 5.4:-13934374 None:intergenic
ACTTGCTCAGCTTGAGATGC+AGG 0.406924 5.4:-13933399 None:intergenic
GTACAAGATTCTTCTTCCCT+TGG 0.408031 5.4:-13938748 None:intergenic
ATGAGGCAACAAAAGCAATA+AGG 0.417051 5.4:+13939543 MS.gene59487:CDS
TCCACAGCCATCTTAAGCTT+TGG 0.417058 5.4:-13934677 None:intergenic
AACACAGAATCCCATTTGCT+TGG 0.417471 5.4:-13937180 None:intergenic
TAGTTAGAGGTGACTCTGGC+AGG 0.423741 5.4:+13936640 MS.gene59487:CDS
GAGATAACAAAGTGATACTT+TGG 0.425255 5.4:+13937021 MS.gene59487:CDS
TGGGATGACAAAACAATTCA+TGG 0.425736 5.4:+13934272 MS.gene59487:CDS
TTTGACAGACAATGGCTTAG+TGG 0.429155 5.4:+13937947 MS.gene59487:CDS
TACACTATATAGGTGGAGTC+TGG 0.435729 5.4:+13936214 MS.gene59487:intron
AGGCATGGAGGTACTGGTCT+AGG 0.437294 5.4:+13937522 MS.gene59487:intron
TATTTCAGGCATGGAGGTAC+TGG 0.439009 5.4:+13937516 MS.gene59487:intron
TTTGATCCTAATGGATTGTC+AGG 0.439291 5.4:+13939092 MS.gene59487:CDS
CACTATCCAATAAATCTTGA+AGG 0.440106 5.4:+13938271 MS.gene59487:CDS
AAACTTGAAGAGACTTCCTT+TGG 0.443045 5.4:+13934841 MS.gene59487:CDS
TCTTTGCATCGTTAGGAACT+TGG 0.444026 5.4:+13937545 MS.gene59487:CDS
TAGGTATCGATCCAAGCAAA+TGG 0.444365 5.4:+13937169 MS.gene59487:intron
CCTTTCAACTCATCAAGCTT+GGG 0.447280 5.4:+13934253 MS.gene59487:CDS
TTAGGATCAAATCATATTGA+TGG 0.448278 5.4:-13939080 None:intergenic
GATATGCCAAAATTAGTTAG+AGG 0.449305 5.4:+13936627 MS.gene59487:CDS
TCGGAAAGGACACTTACTAA+TGG 0.460922 5.4:+13938489 MS.gene59487:CDS
AAGCATCCATGCCAACCTTA+AGG 0.465093 5.4:-13939646 None:intergenic
ATATTCCACATCCTCAAAAT+CGG 0.469359 5.4:-13933303 None:intergenic
TGGTTTAGTGAGTGAGAGAA+TGG 0.469497 5.4:-13939708 None:intergenic
CTTGCACTACAAGGCAATAT+GGG 0.472560 5.4:+13938109 MS.gene59487:CDS
TTTAGCTTTGTTGTCTTCAG+AGG 0.483395 5.4:-13938770 None:intergenic
AGGAAATCAGAGGAAGGAAC+AGG 0.483804 5.4:+13939563 MS.gene59487:CDS
TGAGAGATCTTTCAAAACAT+TGG 0.483958 5.4:+13935466 MS.gene59487:CDS
CATACCAAGAAAGTATATCA+TGG 0.484306 5.4:+13935433 MS.gene59487:CDS
ATAACAATCAATTACAAGAA+TGG 0.485356 5.4:+13934122 MS.gene59487:CDS
TGTATGACAGTCATGAACTA+AGG 0.486515 5.4:+13935936 MS.gene59487:intron
CAGGTATTGCTTGCACTACA+AGG 0.486574 5.4:+13938100 MS.gene59487:intron
TGATGAAGCCAAATGCCTTA+AGG 0.487966 5.4:+13939631 MS.gene59487:CDS
GCCAAAGATGGATGGATATG+AGG 0.491952 5.4:+13939526 MS.gene59487:CDS
AAAAGTATTATGGCTGTTGT+TGG 0.492363 5.4:+13934506 MS.gene59487:CDS
AATGATAAGAAATCACTTGA+GGG 0.496123 5.4:+13938850 MS.gene59487:CDS
CCATAAAGACGGAGCTTCGT+CGG 0.496665 5.4:+13938470 MS.gene59487:CDS
GTTGTTGTTGCTGTAGGTGA+TGG 0.497897 5.4:+13938949 MS.gene59487:CDS
CCAAGCTTGATGAGTTGAAA+GGG 0.499413 5.4:-13934252 None:intergenic
ACAGCCATCTTAAGCTTTGG+TGG 0.499420 5.4:-13934674 None:intergenic
TTCATACCTGACAATCCATT+AGG 0.501681 5.4:-13939098 None:intergenic
TAAGATGGGTGGAGAAATCA+AGG 0.502216 5.4:+13937836 MS.gene59487:CDS
GCCATCTTAAGCTTTGGTGG+TGG 0.502735 5.4:-13934671 None:intergenic
GATACTTTGGTTTGAAGTTG+AGG 0.505428 5.4:+13937034 MS.gene59487:CDS
GTCTAGGTCTTTGCATCGTT+AGG 0.507867 5.4:+13937538 MS.gene59487:CDS
TGCCATGTAGCTACACCATC+CGG 0.509110 5.4:-13934413 None:intergenic
TACTAAGCATCAAAGATATG+AGG 0.509714 5.4:+13938308 MS.gene59487:CDS
AGTGGTTGCAGAGAACTTAT+GGG 0.510065 5.4:+13934732 MS.gene59487:CDS
CTCTTCCAAAATACTTGTGA+AGG 0.511302 5.4:-13938408 None:intergenic
TTATTAGAAGAATCCCAAAC+AGG 0.512019 5.4:-13934485 None:intergenic
CATGTTGAGAATGCTAAGCT+AGG 0.514123 5.4:+13934785 MS.gene59487:CDS
ACTTGGGACGCGAACTTGAA+GGG 0.516777 5.4:+13936266 MS.gene59487:CDS
GCTTTAAATTTGACAGACAA+TGG 0.517382 5.4:+13937939 MS.gene59487:CDS
AAGATACACCAGTAATTCAA+AGG 0.521392 5.4:+13938893 MS.gene59487:CDS
TTTGTCATCGTTGTTGACAT+TGG 0.524996 5.4:+13938340 MS.gene59487:CDS
TTCTGAAATTACAACAGCTC+AGG 0.525125 5.4:+13933338 MS.gene59487:CDS
TTCCGGATGGTGTAGCTACA+TGG 0.528222 5.4:+13934411 MS.gene59487:CDS
GAAGTTGAGGACACAGGCTG+TGG 0.528521 5.4:+13937047 MS.gene59487:CDS
TTTGCTTCTTAGTGCACCAA+TGG 0.532448 5.4:+13937899 MS.gene59487:CDS
AAGACGGAGCTTCGTCGGAA+AGG 0.533943 5.4:+13938475 MS.gene59487:CDS
TGTGCTGTTAGAGCAACAAT+TGG 0.534132 5.4:-13939596 None:intergenic
GTCAATTCCTTGCAAACATG+AGG 0.534970 5.4:+13935645 MS.gene59487:CDS
TGGATGGCAGGTTAATAAGA+TGG 0.537101 5.4:+13937821 MS.gene59487:intron
AGATCTTTCAAATTACTCCA+TGG 0.538971 5.4:+13934202 MS.gene59487:CDS
GGAGCTGTTGTTGTTGCTGT+AGG 0.539267 5.4:+13938943 MS.gene59487:CDS
GGATGGCAGGTTAATAAGAT+GGG 0.539780 5.4:+13937822 MS.gene59487:intron
GACTTGGGACGCGAACTTGA+AGG 0.541648 5.4:+13936265 MS.gene59487:CDS
ATTGACAAATGGAGTGTCAA+AGG 0.544031 5.4:+13935547 MS.gene59487:CDS
AGGTATCGATCCAAGCAAAT+GGG 0.547486 5.4:+13937170 MS.gene59487:intron
TGTTGCTCTGTGACATCCAT+TGG 0.548514 5.4:-13937915 None:intergenic
CCCAAGCTTGATGAGTTGAA+AGG 0.549150 5.4:-13934253 None:intergenic
AAGGGACTTGACCATGTTTG+AGG 0.549611 5.4:-13934234 None:intergenic
AATTAGATGCCAAAGATGGA+TGG 0.551523 5.4:+13939518 MS.gene59487:intron
GCCACCACCAAAGCTTAAGA+TGG 0.552183 5.4:+13934670 MS.gene59487:CDS
AAATAAACCTCATGTTTGCA+AGG 0.556476 5.4:-13935652 None:intergenic
GGAAAATTAGATGCCAAAGA+TGG 0.561731 5.4:+13939514 MS.gene59487:intron
AATCCAATTACTGCTGCCAT+AGG 0.562131 5.4:-13935962 None:intergenic
TAATGTTAGCCATCTTGATA+GGG 0.562447 5.4:+13933184 None:intergenic
TAGGGTGACAAGGTCAAGAA+AGG 0.566276 5.4:+13938822 MS.gene59487:CDS
TCATGAACTAAGGACACCTA+TGG 0.568676 5.4:+13935946 MS.gene59487:CDS
TCATTGAGTAGTTTGGCGTA+TGG 0.569196 5.4:+13933255 MS.gene59487:CDS
GCACAATGGAAGCATCTGAA+TGG 0.570506 5.4:+13938173 MS.gene59487:CDS
ATGGAAGCATCTGAATGGAA+TGG 0.570666 5.4:+13938178 MS.gene59487:CDS
AAGAAAGTATATCATGGGAC+AGG 0.570703 5.4:+13935439 MS.gene59487:CDS
TGCAACACAAGCTTATGATA+GGG 0.572109 5.4:+13938804 MS.gene59487:CDS
TAAGTCAACTTGAAGCAAGA+AGG 0.572906 5.4:+13935594 MS.gene59487:CDS
CCAATATGTTGTTAAGAAGA+CGG 0.575002 5.4:-13936072 None:intergenic
AGATACACCAGTAATTCAAA+GGG 0.575176 5.4:+13938894 MS.gene59487:CDS
GAAGATTTGATCAACATAGC+AGG 0.577289 5.4:+13934377 MS.gene59487:CDS
AAATTAGTTAGAGGTGACTC+TGG 0.577940 5.4:+13936636 MS.gene59487:CDS
ATCTCAAGCTGAGCAAGTTG+AGG 0.579080 5.4:+13933404 MS.gene59487:CDS
GTCATGTTATTCTGCGAGGA+TGG 0.580292 5.4:+13936877 MS.gene59487:CDS
AAAGTATATCATGGGACAGG+TGG 0.583109 5.4:+13935442 MS.gene59487:CDS
GAATGATAAGAAATCACTTG+AGG 0.584649 5.4:+13938849 MS.gene59487:CDS
ACCAAAGCTTAAGATGGCTG+TGG 0.586674 5.4:+13934676 MS.gene59487:CDS
ATACCAAGAAAGTATATCAT+GGG 0.587306 5.4:+13935434 MS.gene59487:CDS
ATGTTGAGAATGCTAAGCTA+GGG 0.588292 5.4:+13934786 MS.gene59487:CDS
GGTCAATAGCCCTATCAAGA+TGG 0.588935 5.4:-13933193 None:intergenic
GAAGCCAAATGCCTTAAGGT+TGG 0.589210 5.4:+13939635 MS.gene59487:CDS
TCAACTTGAAGCAAGAAGGA+AGG 0.590551 5.4:+13935598 MS.gene59487:CDS
TGAAGCAAGAAGGAAGGCAG+AGG 0.592213 5.4:+13935604 MS.gene59487:CDS
AGAAGATGCAGAATTCGACT+TGG 0.592480 5.4:+13936249 MS.gene59487:CDS
GGTTGCATCAACCTCAAACA+TGG 0.597197 5.4:+13934223 MS.gene59487:CDS
TGGCAGGTTAATAAGATGGG+TGG 0.597564 5.4:+13937825 MS.gene59487:intron
GAAGATGATATAATAAGACT+TGG 0.598140 5.4:+13934704 MS.gene59487:CDS
CACATCAAATACCATAAAGA+CGG 0.600188 5.4:+13938459 MS.gene59487:CDS
AATTGAGAATCATACCAGAA+AGG 0.600279 5.4:-13936345 None:intergenic
ATTTGGAAGAAAATAATCCA+AGG 0.600592 5.4:+13938731 MS.gene59487:CDS
AAGCAATGAGGGCAGTAACA+TGG 0.603356 5.4:+13934066 MS.gene59487:CDS
GAACCACTTGATCCTGTCAC+AGG 0.609145 5.4:+13934320 MS.gene59487:CDS
TGGTTTGAAGTTGAGGACAC+AGG 0.609745 5.4:+13937041 MS.gene59487:CDS
GCAGCTATATGAAGCAATGA+GGG 0.611384 5.4:+13934055 MS.gene59487:intron
TAGAAGAGAGTCTCTCCAGA+AGG 0.615474 5.4:+13939020 MS.gene59487:CDS
TTAGTCGAATTTGTAAGTAA+CGG 0.616052 5.4:-13934647 None:intergenic
CAAATGCCTTAAGGTTGGCA+TGG 0.617547 5.4:+13939640 MS.gene59487:CDS
TCGCCTGTGACAGGATCAAG+TGG 0.620643 5.4:-13934323 None:intergenic
GGTAAAGCTGCCGAAAGCAA+AGG 0.621545 5.4:-13934464 None:intergenic
AAAAGCAATAAGGAAATCAG+AGG 0.621819 5.4:+13939553 MS.gene59487:CDS
GCAATAAGGAAATCAGAGGA+AGG 0.623445 5.4:+13939557 MS.gene59487:CDS
TTTGGAAGAAAATAATCCAA+GGG 0.626055 5.4:+13938732 MS.gene59487:CDS
GGCTATTGACCATATTAACA+TGG 0.629966 5.4:+13933205 MS.gene59487:CDS
AGCAGCTATATGAAGCAATG+AGG 0.636477 5.4:+13934054 MS.gene59487:intron
CAACATATTGGATCTGAGCA+AGG 0.636910 5.4:+13936084 MS.gene59487:CDS
GAGTTAGTTGAGATGCATAG+TGG 0.639051 5.4:+13934569 MS.gene59487:CDS
TTGGAAGAGCGAAATTTGTG+TGG 0.640386 5.4:+13938422 MS.gene59487:CDS
AGTTAGAGGTGACTCTGGCA+GGG 0.641913 5.4:+13936641 MS.gene59487:CDS
GAAGATGCAGAATTCGACTT+GGG 0.643061 5.4:+13936250 MS.gene59487:CDS
TAGAGGTGACTCTGGCAGGG+TGG 0.646259 5.4:+13936644 MS.gene59487:CDS
GGACTTTCACAAGTTCCGGA+TGG 0.648808 5.4:+13934398 MS.gene59487:CDS
GTTTGAGGTTGATGCAACCA+TGG 0.651337 5.4:-13934219 None:intergenic
TTTACTTATTTCAGGCATGG+AGG 0.660130 5.4:+13937510 MS.gene59487:intron
ATGATAAGAAATCACTTGAG+GGG 0.670799 5.4:+13938851 MS.gene59487:CDS
GTAGAATAATAACATCGAAG+TGG 0.676676 5.4:+13938131 MS.gene59487:CDS
TAATAAGACTTGGAGCTGAG+TGG 0.679941 5.4:+13934714 MS.gene59487:CDS
GCTGGTCATGTTATTCTGCG+AGG 0.686581 5.4:+13936873 MS.gene59487:intron
AGGTGATGGACAACAAGCAG+TGG 0.694466 5.4:+13938963 MS.gene59487:CDS
AAGCTTATGATAGGGTGACA+AGG 0.699339 5.4:+13938812 MS.gene59487:CDS
ATGTATTTGACTTCTCAACA+AGG 0.699506 5.4:+13934596 MS.gene59487:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATATTGTAAAAAATTG+CGG - chr5.4:13935067-13935086 None:intergenic 10.0%
!!! ATTTTAAATATCTATGATAT+TGG + chr5.4:13933535-13933554 MS.gene59487:intron 10.0%
!!! TTATTTTTAAAAATTGTTAC+TGG + chr5.4:13935778-13935797 MS.gene59487:intron 10.0%
!!! TTTTATTTTTTTGATAAGAT+TGG + chr5.4:13933606-13933625 MS.gene59487:intron 10.0%
!! CTATTAATAATTATTACCAA+AGG - chr5.4:13934860-13934879 None:intergenic 15.0%
!! TAAAACAGAAATTAAATAGA+GGG - chr5.4:13935360-13935379 None:intergenic 15.0%
!! TTAAAACAGAAATTAAATAG+AGG - chr5.4:13935361-13935380 None:intergenic 15.0%
!!! ACTTATTTTATTTTGACAAA+AGG - chr5.4:13937108-13937127 None:intergenic 15.0%
!!! TTCATGAAATGTAAATTTTA+AGG - chr5.4:13937079-13937098 None:intergenic 15.0%
!!! TTCTTCTAATAAAAGTATTA+TGG + chr5.4:13934496-13934515 MS.gene59487:CDS 15.0%
!! AAAAAAATTCACATTTCCTT+TGG + chr5.4:13937672-13937691 MS.gene59487:intron 20.0%
!! AACAATAATGCTTGAAAAAA+TGG + chr5.4:13938921-13938940 MS.gene59487:CDS 20.0%
!! AATGATAATTAAGTCAGTTA+TGG + chr5.4:13933492-13933511 MS.gene59487:intron 20.0%
!! ACAATAATGCTTGAAAAAAT+GGG + chr5.4:13938922-13938941 MS.gene59487:CDS 20.0%
!! ATAACAATCAATTACAAGAA+TGG + chr5.4:13934122-13934141 MS.gene59487:CDS 20.0%
!! ATACATAACAAAAATTGGTT+AGG - chr5.4:13934017-13934036 None:intergenic 20.0%
!! ATATAAAATTACACTTGTGT+TGG + chr5.4:13939261-13939280 MS.gene59487:intron 20.0%
!! ATATCTAATAAGTGAATATC+AGG + chr5.4:13939460-13939479 MS.gene59487:intron 20.0%
!! GAAATTTAAGGATAACAAAT+AGG + chr5.4:13938054-13938073 MS.gene59487:intron 20.0%
!! TCATTTGTTCAAATTATAAC+CGG - chr5.4:13936435-13936454 None:intergenic 20.0%
!! TTAAATCCTTCAAGATTTAT+TGG - chr5.4:13938280-13938299 None:intergenic 20.0%
!! TTCTGATCAAGATAAAAATT+CGG - chr5.4:13936933-13936952 None:intergenic 20.0%
!! TTGAATTGAAATGAAATTCA+GGG + chr5.4:13933936-13933955 MS.gene59487:intron 20.0%
!! TTTGGATAAATAGTTTAATC+AGG + chr5.4:13939213-13939232 MS.gene59487:intron 20.0%
!!! AAGTCAAATTATTTTCATAC+AGG + chr5.4:13939394-13939413 MS.gene59487:intron 20.0%
!!! AGACATTTTGTAAAAAATTG+CGG - chr5.4:13935011-13935030 None:intergenic 20.0%
!!! AGATCATACAATTGAAATTT+TGG + chr5.4:13937340-13937359 MS.gene59487:intron 20.0%
!!! AGCAAAAATGATTCATATTT+TGG + chr5.4:13938531-13938550 MS.gene59487:CDS 20.0%
!!! ATTTTCTGAAGAAGAAAAAA+AGG + chr5.4:13937633-13937652 MS.gene59487:intron 20.0%
!!! CGTGCTTTTAAAATATTTTT+AGG + chr5.4:13934883-13934902 MS.gene59487:intron 20.0%
!!! GTATACTAGTTTTACAAAAT+TGG + chr5.4:13935180-13935199 MS.gene59487:intron 20.0%
!!! TAAGTTCCTTTTATTTTTGT+TGG + chr5.4:13937801-13937820 MS.gene59487:intron 20.0%
!!! TAGACTTTAATTTCAATGAA+AGG + chr5.4:13936537-13936556 MS.gene59487:intron 20.0%
!!! TTCACTTTAAAATTGAGAAA+AGG + chr5.4:13935090-13935109 MS.gene59487:intron 20.0%
!!! TTTTACAAAATTGGATTATC+TGG + chr5.4:13935189-13935208 MS.gene59487:intron 20.0%
!!! TTTTTTATTATGTGTGCAAT+TGG - chr5.4:13936162-13936181 None:intergenic 20.0%
! AAACAAATGTGATTTATTCG+TGG - chr5.4:13937131-13937150 None:intergenic 25.0%
! AATGATAAGAAATCACTTGA+GGG + chr5.4:13938850-13938869 MS.gene59487:CDS 25.0%
! ACTAAATTGACCAAATCAAA+AGG - chr5.4:13933581-13933600 None:intergenic 25.0%
! AGGACATACATAACAAAAAT+TGG - chr5.4:13934022-13934041 None:intergenic 25.0%
! ATAATATAGCACTATCTTAG+TGG + chr5.4:13933768-13933787 MS.gene59487:intron 25.0%
! ATATCATCTGCATGAAAAAT+AGG - chr5.4:13936612-13936631 None:intergenic 25.0%
! ATGTATATAGTCAATGATCT+CGG + chr5.4:13937307-13937326 MS.gene59487:intron 25.0%
! ATTTGGAAGAAAATAATCCA+AGG + chr5.4:13938731-13938750 MS.gene59487:CDS 25.0%
! CAAAAGAAAAACATGAAAGA+GGG + chr5.4:13938586-13938605 MS.gene59487:CDS 25.0%
! CAAAAGGACTAATGTAATTA+AGG - chr5.4:13933565-13933584 None:intergenic 25.0%
! CCTATATAGTGTAAAACATT+AGG - chr5.4:13936207-13936226 None:intergenic 25.0%
! CTAAAAGCAAGAGAAATTTA+AGG + chr5.4:13938042-13938061 MS.gene59487:intron 25.0%
! GAAAAAATCATTGAGTAGTT+TGG + chr5.4:13933248-13933267 MS.gene59487:CDS 25.0%
! GAAGATGATATAATAAGACT+TGG + chr5.4:13934704-13934723 MS.gene59487:CDS 25.0%
! GATATAAAAAAGCTACCTAT+TGG - chr5.4:13939445-13939464 None:intergenic 25.0%
! GTAAGAAAAAACAAACATTG+AGG - chr5.4:13937459-13937478 None:intergenic 25.0%
! GTTGAATTGAAATGAAATTC+AGG + chr5.4:13933935-13933954 MS.gene59487:intron 25.0%
! TATGTTCTAGTATAGTTACT+TGG + chr5.4:13936730-13936749 MS.gene59487:intron 25.0%
! TCAATATGATTTGATCCTAA+TGG + chr5.4:13939083-13939102 MS.gene59487:CDS 25.0%
! TTAAATGTAATCGTATGTGT+TGG + chr5.4:13936460-13936479 MS.gene59487:intron 25.0%
! TTAGGATCAAATCATATTGA+TGG - chr5.4:13939083-13939102 None:intergenic 25.0%
! TTAGTCGAATTTGTAAGTAA+CGG - chr5.4:13934650-13934669 None:intergenic 25.0%
! TTGAATGTAAACAAATGTGT+CGG - chr5.4:13935752-13935771 None:intergenic 25.0%
! TTTGGAAGAAAATAATCCAA+GGG + chr5.4:13938732-13938751 MS.gene59487:CDS 25.0%
! TTTGTTTATTTCCTATGTTG+TGG + chr5.4:13937144-13937163 MS.gene59487:intron 25.0%
!! AATGTTTTACACTATATAGG+TGG + chr5.4:13936207-13936226 MS.gene59487:intron 25.0%
!! AGTATTTAATTTAGAGAGCA+AGG + chr5.4:13935723-13935742 MS.gene59487:intron 25.0%
!! ATACCAAGAAAGTATATCAT+GGG + chr5.4:13935434-13935453 MS.gene59487:CDS 25.0%
!! CCTAATGTTTTACACTATAT+AGG + chr5.4:13936204-13936223 MS.gene59487:intron 25.0%
!! TCTTTATGCATTTTTGTCAT+TGG + chr5.4:13935506-13935525 MS.gene59487:CDS 25.0%
!! TGTTATCTTTTAGATCTCTA+TGG - chr5.4:13934163-13934182 None:intergenic 25.0%
!! TTCCAAATGTTCATTTTCAT+CGG - chr5.4:13938719-13938738 None:intergenic 25.0%
!! TTGTTCATAAATTAGCTTCA+TGG + chr5.4:13935895-13935914 MS.gene59487:intron 25.0%
!!! ATCATTTTTGCTTTGTATAG+AGG - chr5.4:13938523-13938542 None:intergenic 25.0%
!!! TCATCGGTTAACTTTAAAAT+TGG - chr5.4:13938703-13938722 None:intergenic 25.0%
!!! TGAAATTTTTCAATCATGCT+AGG + chr5.4:13933913-13933932 MS.gene59487:intron 25.0%
!!! TGCATTTTGATATTGACAAA+TGG + chr5.4:13935536-13935555 MS.gene59487:CDS 25.0%
!!! TTACATTAGTCCTTTTGATT+TGG + chr5.4:13933568-13933587 MS.gene59487:intron 25.0%
!!! TTCCTTTTATTTTTGTTGGA+TGG + chr5.4:13937805-13937824 MS.gene59487:intron 25.0%
!!! TTTTTTACAAAATGTCTCCA+TGG + chr5.4:13935014-13935033 MS.gene59487:intron 25.0%
AAAAGCAATAAGGAAATCAG+AGG + chr5.4:13939553-13939572 MS.gene59487:CDS 30.0%
AAATAAACCTCATGTTTGCA+AGG - chr5.4:13935655-13935674 None:intergenic 30.0%
AACCGATGAAAATGAACATT+TGG + chr5.4:13938714-13938733 MS.gene59487:CDS 30.0%
AAGATACACCAGTAATTCAA+AGG + chr5.4:13938893-13938912 MS.gene59487:CDS 30.0%
AAGATCCTCAACTTTGATTA+TGG + chr5.4:13934926-13934945 MS.gene59487:intron 30.0%
AAGTCCTAATACTGTTATTC+TGG - chr5.4:13939124-13939143 None:intergenic 30.0%
AATTGAGAATCATACCAGAA+AGG - chr5.4:13936348-13936367 None:intergenic 30.0%
AGAAATCAAGGTTACCAAAA+AGG + chr5.4:13937848-13937867 MS.gene59487:CDS 30.0%
AGATACACCAGTAATTCAAA+GGG + chr5.4:13938894-13938913 MS.gene59487:CDS 30.0%
AGATCTTTCAAATTACTCCA+TGG + chr5.4:13934202-13934221 MS.gene59487:CDS 30.0%
AGTGGATGCTCTTAATTATA+TGG + chr5.4:13938981-13939000 MS.gene59487:CDS 30.0%
ATATTCCACATCCTCAAAAT+CGG - chr5.4:13933306-13933325 None:intergenic 30.0%
ATGATAAGAAATCACTTGAG+GGG + chr5.4:13938851-13938870 MS.gene59487:CDS 30.0%
CACATCAAATACCATAAAGA+CGG + chr5.4:13938459-13938478 MS.gene59487:CDS 30.0%
CACTATCCAATAAATCTTGA+AGG + chr5.4:13938271-13938290 MS.gene59487:CDS 30.0%
CCAATATGTTGTTAAGAAGA+CGG - chr5.4:13936075-13936094 None:intergenic 30.0%
CTGAATCCTTTACTTATTTC+AGG + chr5.4:13937502-13937521 MS.gene59487:intron 30.0%
CTTGTGAAATTGTTTGACAT+AGG + chr5.4:13939185-13939204 MS.gene59487:intron 30.0%
GAATGATAAGAAATCACTTG+AGG + chr5.4:13938849-13938868 MS.gene59487:CDS 30.0%
GAGATAACAAAGTGATACTT+TGG + chr5.4:13937021-13937040 MS.gene59487:CDS 30.0%
GAGGATCTTATATAAAACCT+TGG - chr5.4:13934915-13934934 None:intergenic 30.0%
GATATGCCAAAATTAGTTAG+AGG + chr5.4:13936627-13936646 MS.gene59487:CDS 30.0%
GATTATGGTTGCAATGATTA+AGG + chr5.4:13934941-13934960 MS.gene59487:intron 30.0%
GCAAAAGAAAAACATGAAAG+AGG + chr5.4:13938585-13938604 MS.gene59487:CDS 30.0%
GTAGAATAATAACATCGAAG+TGG + chr5.4:13938131-13938150 MS.gene59487:CDS 30.0%
GTTCAATGAAGATTCATTGT+CGG - chr5.4:13935260-13935279 None:intergenic 30.0%
TAAATACTAAGTGTGAATGC+AGG + chr5.4:13938081-13938100 MS.gene59487:intron 30.0%
TAACCGAATTCGAACATTAT+AGG - chr5.4:13935869-13935888 None:intergenic 30.0%
TAAGTCAGTTATGGCTAAAT+TGG + chr5.4:13933501-13933520 MS.gene59487:intron 30.0%
TAATGCTTTATCTGTGTTTG+TGG + chr5.4:13939493-13939512 MS.gene59487:intron 30.0%
TACTAAGCATCAAAGATATG+AGG + chr5.4:13938308-13938327 MS.gene59487:CDS 30.0%
TATTGTAAATGCATTACAGC+TGG + chr5.4:13936855-13936874 MS.gene59487:intron 30.0%
TATTTCCTATGTTGTGGTAT+AGG + chr5.4:13937150-13937169 MS.gene59487:intron 30.0%
TCAACAACGATGACAAAAAT+TGG - chr5.4:13938337-13938356 None:intergenic 30.0%
TCATTGAACTCTTTAAACTC+TGG + chr5.4:13935271-13935290 MS.gene59487:intron 30.0%
TCTATTAAGCATAAAGTTGC+AGG + chr5.4:13935323-13935342 MS.gene59487:intron 30.0%
TCTGCATGAAAAATAGGTAT+TGG - chr5.4:13936606-13936625 None:intergenic 30.0%
TGAACCAGAATAACAGTATT+AGG + chr5.4:13939117-13939136 MS.gene59487:intron 30.0%
TGAGAGATCTTTCAAAACAT+TGG + chr5.4:13935466-13935485 MS.gene59487:CDS 30.0%
TGCCATCCAACAAAAATAAA+AGG - chr5.4:13937810-13937829 None:intergenic 30.0%
TGTCCTATAATGTTCGAATT+CGG + chr5.4:13935863-13935882 MS.gene59487:intron 30.0%
TGTGAAATGCCATGTTAATA+TGG - chr5.4:13933217-13933236 None:intergenic 30.0%
TGTTCAAATTATAACCGGTA+TGG - chr5.4:13936430-13936449 None:intergenic 30.0%
TTACGTCGTAACAAAATGAT+TGG - chr5.4:13935388-13935407 None:intergenic 30.0%
TTATTAGAAGAATCCCAAAC+AGG - chr5.4:13934488-13934507 None:intergenic 30.0%
TTCTGGTATGATTCTCAATT+TGG + chr5.4:13936348-13936367 MS.gene59487:intron 30.0%
TTGACTTAAGCACAGATATA+TGG + chr5.4:13938368-13938387 MS.gene59487:CDS 30.0%
! AACTTCCTTCACAAGTATTT+TGG + chr5.4:13938403-13938422 MS.gene59487:CDS 30.0%
! ACAACTGCATTTTATAGTGT+TGG + chr5.4:13934533-13934552 MS.gene59487:CDS 30.0%
! ATGGTAACTTTTCAGCAATT+TGG + chr5.4:13934291-13934310 MS.gene59487:CDS 30.0%
! ATGTATTTGACTTCTCAACA+AGG + chr5.4:13934596-13934615 MS.gene59487:CDS 30.0%
! CATACCAAGAAAGTATATCA+TGG + chr5.4:13935433-13935452 MS.gene59487:CDS 30.0%
! GCTTTAAATTTGACAGACAA+TGG + chr5.4:13937939-13937958 MS.gene59487:CDS 30.0%
! TGGACTAACACAAATTTTGA+GGG + chr5.4:13938198-13938217 MS.gene59487:CDS 30.0%
! TTACTTGGTAGTTACAATAG+TGG + chr5.4:13936745-13936764 MS.gene59487:intron 30.0%
! TTATCAAGTATTGCTCCAAT+AGG + chr5.4:13939427-13939446 MS.gene59487:intron 30.0%
! TTTTAGACCTAGTTTACCAA+AGG - chr5.4:13937691-13937710 None:intergenic 30.0%
!! AAAAGTATTATGGCTGTTGT+TGG + chr5.4:13934506-13934525 MS.gene59487:CDS 30.0%
!! ATCTTGTATTTTTGTCCTTC+TGG - chr5.4:13939038-13939057 None:intergenic 30.0%
!! ATGGACTAACACAAATTTTG+AGG + chr5.4:13938197-13938216 MS.gene59487:CDS 30.0%
!! ATTTGTCTCTGAAATAGTAG+AGG - chr5.4:13933737-13933756 None:intergenic 30.0%
!!! ATATTTTTAGGTGATCACCA+AGG + chr5.4:13934895-13934914 MS.gene59487:intron 30.0%
!!! CTTCATGGTTTGTTTTTTCT+TGG + chr5.4:13935910-13935929 MS.gene59487:intron 30.0%
!!! TGATTGTGTGATTGTTTTTG+AGG + chr5.4:13937763-13937782 MS.gene59487:intron 30.0%
!!! TTTTATTTTTGTTGGATGGC+AGG + chr5.4:13937809-13937828 MS.gene59487:intron 30.0%
AAACTTGAAGAGACTTCCTT+TGG + chr5.4:13934841-13934860 MS.gene59487:CDS 35.0%
AAATTAGTTAGAGGTGACTC+TGG + chr5.4:13936636-13936655 MS.gene59487:CDS 35.0%
AATCAAGGTTACCAAAAAGG+AGG + chr5.4:13937851-13937870 MS.gene59487:CDS 35.0%
AATGTAAACAAATGTGTCGG+TGG - chr5.4:13935749-13935768 None:intergenic 35.0%
AATTAGATGCCAAAGATGGA+TGG + chr5.4:13939518-13939537 MS.gene59487:intron 35.0%
ACCATAAGCTTGAAGTCAAT+TGG - chr5.4:13939683-13939702 None:intergenic 35.0%
ACGCATTTGAGCTTATTTAC+TGG + chr5.4:13939154-13939173 MS.gene59487:intron 35.0%
ATCAAGGTTACCAAAAAGGA+GGG + chr5.4:13937852-13937871 MS.gene59487:CDS 35.0%
ATGAGGCAACAAAAGCAATA+AGG + chr5.4:13939543-13939562 MS.gene59487:CDS 35.0%
ATGTTGAGAATGCTAAGCTA+GGG + chr5.4:13934786-13934805 MS.gene59487:CDS 35.0%
ATTTCTACAGTCATTGCAGT+CGG - chr5.4:13937429-13937448 None:intergenic 35.0%
CACATTTCCTTTGGTAAACT+AGG + chr5.4:13937681-13937700 MS.gene59487:intron 35.0%
CCGTCTTCTTAACAACATAT+TGG + chr5.4:13936072-13936091 MS.gene59487:CDS 35.0%
CGAAGTGGTTAACCAAAAAA+GGG + chr5.4:13938146-13938165 MS.gene59487:CDS 35.0%
CTCTTCCAAAATACTTGTGA+AGG - chr5.4:13938411-13938430 None:intergenic 35.0%
GAACATTATAGGACATGACA+CGG - chr5.4:13935858-13935877 None:intergenic 35.0%
GAAGATTTGATCAACATAGC+AGG + chr5.4:13934377-13934396 MS.gene59487:CDS 35.0%
GAAGTGGTTAACCAAAAAAG+GGG + chr5.4:13938147-13938166 MS.gene59487:CDS 35.0%
GCTATGTTGATCAAATCTTC+TGG - chr5.4:13934377-13934396 None:intergenic 35.0%
GGAAAATTAGATGCCAAAGA+TGG + chr5.4:13939514-13939533 MS.gene59487:intron 35.0%
GGCTATTGACCATATTAACA+TGG + chr5.4:13933205-13933224 MS.gene59487:CDS 35.0%
TAAGTCAACTTGAAGCAAGA+AGG + chr5.4:13935594-13935613 MS.gene59487:CDS 35.0%
TAGCTGCTACAAATAAAAGC+AGG - chr5.4:13934042-13934061 None:intergenic 35.0%
TCCATGCCTGAAATAAGTAA+AGG - chr5.4:13937511-13937530 None:intergenic 35.0%
TCCTTTACTTATTTCAGGCA+TGG + chr5.4:13937507-13937526 MS.gene59487:intron 35.0%
TCGAAGTGGTTAACCAAAAA+AGG + chr5.4:13938145-13938164 MS.gene59487:CDS 35.0%
TGCAACACAAGCTTATGATA+GGG + chr5.4:13938804-13938823 MS.gene59487:CDS 35.0%
TGCAACCATAATCAAAGTTG+AGG - chr5.4:13934934-13934953 None:intergenic 35.0%
TGGGATGACAAAACAATTCA+TGG + chr5.4:13934272-13934291 MS.gene59487:CDS 35.0%
TGTATGACAGTCATGAACTA+AGG + chr5.4:13935936-13935955 MS.gene59487:intron 35.0%
TGTCCCATGATATACTTTCT+TGG - chr5.4:13935440-13935459 None:intergenic 35.0%
TGTTTGACATAGGTCATGTT+TGG + chr5.4:13939195-13939214 MS.gene59487:intron 35.0%
TTAAGGTTCTTATGTCTCCA+TGG + chr5.4:13934958-13934977 MS.gene59487:intron 35.0%
TTCATACCTGACAATCCATT+AGG - chr5.4:13939101-13939120 None:intergenic 35.0%
TTGAACTCTTTAAACTCTGG+TGG + chr5.4:13935274-13935293 MS.gene59487:intron 35.0%
TTGCAACACAAGCTTATGAT+AGG + chr5.4:13938803-13938822 MS.gene59487:CDS 35.0%
TTTACTTATTTCAGGCATGG+AGG + chr5.4:13937510-13937529 MS.gene59487:intron 35.0%
TTTGTCATCGTTGTTGACAT+TGG + chr5.4:13938340-13938359 MS.gene59487:CDS 35.0%
! AAAATTACACTTGTGTTGGC+CGG + chr5.4:13939265-13939284 MS.gene59487:intron 35.0%
! AAGAAAGTATATCATGGGAC+AGG + chr5.4:13935439-13935458 MS.gene59487:CDS 35.0%
! AAGGAAGTCTCTTCAAGTTT+AGG - chr5.4:13934841-13934860 None:intergenic 35.0%
! ATTGACAAATGGAGTGTCAA+AGG + chr5.4:13935547-13935566 MS.gene59487:CDS 35.0%
! GAGTCACCTCTAACTAATTT+TGG - chr5.4:13936636-13936655 None:intergenic 35.0%
! TTTTCCTAATTCAACTCGTG+AGG + chr5.4:13934760-13934779 MS.gene59487:CDS 35.0%
!! GATACTTTGGTTTGAAGTTG+AGG + chr5.4:13937034-13937053 MS.gene59487:CDS 35.0%
!! TTCTGAAATTACAACAGCTC+AGG + chr5.4:13933338-13933357 MS.gene59487:CDS 35.0%
!! TTTAGCTTTGTTGTCTTCAG+AGG - chr5.4:13938773-13938792 None:intergenic 35.0%
!! TTTGATCCTAATGGATTGTC+AGG + chr5.4:13939092-13939111 MS.gene59487:CDS 35.0%
AAAGTATATCATGGGACAGG+TGG + chr5.4:13935442-13935461 MS.gene59487:CDS 40.0%
AACACAGAATCCCATTTGCT+TGG - chr5.4:13937183-13937202 None:intergenic 40.0%
AACTCTTTAAACTCTGGTGG+TGG + chr5.4:13935277-13935296 MS.gene59487:intron 40.0%
AAGCTTATGATAGGGTGACA+AGG + chr5.4:13938812-13938831 MS.gene59487:CDS 40.0%
AATCCAATTACTGCTGCCAT+AGG - chr5.4:13935965-13935984 None:intergenic 40.0%
ACTCACTAAACCAACAACCT+AGG + chr5.4:13939718-13939737 MS.gene59487:CDS 40.0%
AGAAATCACTTGAGGGGTTA+AGG + chr5.4:13938857-13938876 MS.gene59487:CDS 40.0%
AGAAGATGCAGAATTCGACT+TGG + chr5.4:13936249-13936268 MS.gene59487:CDS 40.0%
AGCAGCTATATGAAGCAATG+AGG + chr5.4:13934054-13934073 MS.gene59487:intron 40.0%
AGTGGTTGCAGAGAACTTAT+GGG + chr5.4:13934732-13934751 MS.gene59487:CDS 40.0%
ATATGACTGATGTCTCGACA+AGG - chr5.4:13934984-13935003 None:intergenic 40.0%
CAACACTGAAATGTCCATAC+CGG + chr5.4:13936413-13936432 MS.gene59487:intron 40.0%
CAACATATTGGATCTGAGCA+AGG + chr5.4:13936084-13936103 MS.gene59487:CDS 40.0%
CATGTTGAGAATGCTAAGCT+AGG + chr5.4:13934785-13934804 MS.gene59487:CDS 40.0%
CCTTTCAACTCATCAAGCTT+GGG + chr5.4:13934253-13934272 MS.gene59487:CDS 40.0%
CGATACCTATACCACAACAT+AGG - chr5.4:13937158-13937177 None:intergenic 40.0%
CTAAACTAGCCCACTGAAAT+AGG - chr5.4:13939357-13939376 None:intergenic 40.0%
CTTGAAGTGTGCTTCTCTAA+AGG + chr5.4:13939307-13939326 MS.gene59487:intron 40.0%
CTTGCACTACAAGGCAATAT+GGG + chr5.4:13938109-13938128 MS.gene59487:CDS 40.0%
GAAGATGCAGAATTCGACTT+GGG + chr5.4:13936250-13936269 MS.gene59487:CDS 40.0%
GAGTTAGTTGAGATGCATAG+TGG + chr5.4:13934569-13934588 MS.gene59487:CDS 40.0%
GCAATAAGGAAATCAGAGGA+AGG + chr5.4:13939557-13939576 MS.gene59487:CDS 40.0%
GCAGCTATATGAAGCAATGA+GGG + chr5.4:13934055-13934074 MS.gene59487:intron 40.0%
GCTTACAGTCTAGTAGTTGA+TGG - chr5.4:13937228-13937247 None:intergenic 40.0%
GGATGGCAGGTTAATAAGAT+GGG + chr5.4:13937822-13937841 MS.gene59487:intron 40.0%
GTACAAGATTCTTCTTCCCT+TGG - chr5.4:13938751-13938770 None:intergenic 40.0%
GTCAATTCCTTGCAAACATG+AGG + chr5.4:13935645-13935664 MS.gene59487:CDS 40.0%
GTTGATCCTACAGTCCAAAT+CGG + chr5.4:13937732-13937751 MS.gene59487:intron 40.0%
GTTGCAACCCTTTGAATTAC+TGG - chr5.4:13938904-13938923 None:intergenic 40.0%
TAAGATGGGTGGAGAAATCA+AGG + chr5.4:13937836-13937855 MS.gene59487:CDS 40.0%
TAATAAGACTTGGAGCTGAG+TGG + chr5.4:13934714-13934733 MS.gene59487:CDS 40.0%
TACACTATATAGGTGGAGTC+TGG + chr5.4:13936214-13936233 MS.gene59487:intron 40.0%
TACAGATTCGCCTTTGCTTT+CGG + chr5.4:13934454-13934473 MS.gene59487:CDS 40.0%
TATTGGATCTGAGCAAGGTA+TGG + chr5.4:13936089-13936108 MS.gene59487:intron 40.0%
TCAACTTGAAGCAAGAAGGA+AGG + chr5.4:13935598-13935617 MS.gene59487:CDS 40.0%
TCATGAACTAAGGACACCTA+TGG + chr5.4:13935946-13935965 MS.gene59487:CDS 40.0%
TCATTGAGTAGTTTGGCGTA+TGG + chr5.4:13933255-13933274 MS.gene59487:CDS 40.0%
TCGGAAAGGACACTTACTAA+TGG + chr5.4:13938489-13938508 MS.gene59487:CDS 40.0%
TCTCAGTGTCAGTACTTCAT+AGG - chr5.4:13936380-13936399 None:intergenic 40.0%
TCTTTGCATCGTTAGGAACT+TGG + chr5.4:13937545-13937564 MS.gene59487:CDS 40.0%
TGATGAAGCCAAATGCCTTA+AGG + chr5.4:13939631-13939650 MS.gene59487:CDS 40.0%
TGGATGGCAGGTTAATAAGA+TGG + chr5.4:13937821-13937840 MS.gene59487:intron 40.0%
TGGTTTAGTGAGTGAGAGAA+TGG - chr5.4:13939711-13939730 None:intergenic 40.0%
TTACGACGTAAACTTTGTGC+AGG + chr5.4:13935397-13935416 MS.gene59487:intron 40.0%
TTGATCCTACAGTCCAAATC+GGG + chr5.4:13937733-13937752 MS.gene59487:intron 40.0%
TTGGAAGAGCGAAATTTGTG+TGG + chr5.4:13938422-13938441 MS.gene59487:CDS 40.0%
TTGGACTGTAGGATCAACAT+CGG - chr5.4:13937730-13937749 None:intergenic 40.0%
TTTGACAGACAATGGCTTAG+TGG + chr5.4:13937947-13937966 MS.gene59487:CDS 40.0%
TTTGCTTCTTAGTGCACCAA+TGG + chr5.4:13937899-13937918 MS.gene59487:CDS 40.0%
! CCAAGCTTGATGAGTTGAAA+GGG - chr5.4:13934255-13934274 None:intergenic 40.0%
! CTCTTTGCATGACTTGCATT+TGG - chr5.4:13936990-13937009 None:intergenic 40.0%
! CTTTAGAGAAGCACACTTCA+AGG - chr5.4:13939309-13939328 None:intergenic 40.0%
! GCCAATTGACTTCAAGCTTA+TGG + chr5.4:13939679-13939698 MS.gene59487:CDS 40.0%
! TGAACCTCACGAGTTGAATT+AGG - chr5.4:13934767-13934786 None:intergenic 40.0%
! TGTGCTGTTAGAGCAACAAT+TGG - chr5.4:13939599-13939618 None:intergenic 40.0%
!! AGGTATCGATCCAAGCAAAT+GGG + chr5.4:13937170-13937189 MS.gene59487:intron 40.0%
!! ATGAAGTACTGACACTGAGA+CGG + chr5.4:13936380-13936399 MS.gene59487:intron 40.0%
!! ATGGAAGCATCTGAATGGAA+TGG + chr5.4:13938178-13938197 MS.gene59487:CDS 40.0%
!! GAGACTGTTTTAGACCTTTC+TGG + chr5.4:13936331-13936350 MS.gene59487:CDS 40.0%
!! TAGGTATCGATCCAAGCAAA+TGG + chr5.4:13937169-13937188 MS.gene59487:intron 40.0%
AAGCAATGAGGGCAGTAACA+TGG + chr5.4:13934066-13934085 MS.gene59487:CDS 45.0%
AAGCATCCATGCCAACCTTA+AGG - chr5.4:13939649-13939668 None:intergenic 45.0%
AAGGGACTTGACCATGTTTG+AGG - chr5.4:13934237-13934256 None:intergenic 45.0%
ACACCTATGGCAGCAGTAAT+TGG + chr5.4:13935959-13935978 MS.gene59487:CDS 45.0%
ACCAAAGCTTAAGATGGCTG+TGG + chr5.4:13934676-13934695 MS.gene59487:CDS 45.0%
ACTCCTTCCATCTGTCATGT+CGG + chr5.4:13936495-13936514 MS.gene59487:intron 45.0%
AGCAGGACTTTCACAAGTTC+CGG + chr5.4:13934394-13934413 MS.gene59487:CDS 45.0%
AGGAAATCAGAGGAAGGAAC+AGG + chr5.4:13939563-13939582 MS.gene59487:CDS 45.0%
AGTCGGCTGATCTAAATCGT+TGG - chr5.4:13937412-13937431 None:intergenic 45.0%
ATCTCAAGCTGAGCAAGTTG+AGG + chr5.4:13933404-13933423 MS.gene59487:CDS 45.0%
CAAATGCCTTAAGGTTGGCA+TGG + chr5.4:13939640-13939659 MS.gene59487:CDS 45.0%
CAATCACACATTCCCCGATT+TGG - chr5.4:13937749-13937768 None:intergenic 45.0%
CCCTTTCAACTCATCAAGCT+TGG + chr5.4:13934252-13934271 MS.gene59487:CDS 45.0%
CCTGTCACAGGCGAAAAAAT+CGG + chr5.4:13934332-13934351 MS.gene59487:CDS 45.0%
GAAGCCAAATGCCTTAAGGT+TGG + chr5.4:13939635-13939654 MS.gene59487:CDS 45.0%
GACGTAAACTTTGTGCAGGT+AGG + chr5.4:13935401-13935420 MS.gene59487:intron 45.0%
GAGTGGTTGCAGAGAACTTA+TGG + chr5.4:13934731-13934750 MS.gene59487:CDS 45.0%
GCCAAAGATGGATGGATATG+AGG + chr5.4:13939526-13939545 MS.gene59487:CDS 45.0%
GCCTCATATCCATCCATCTT+TGG - chr5.4:13939530-13939549 None:intergenic 45.0%
GCTTGCACTACAAGGCAATA+TGG + chr5.4:13938108-13938127 MS.gene59487:CDS 45.0%
GGACTATCGTTGCAAGAGTT+TGG - chr5.4:13936912-13936931 None:intergenic 45.0%
GGTCAATAGCCCTATCAAGA+TGG - chr5.4:13933196-13933215 None:intergenic 45.0%
GGTTGCATCAACCTCAAACA+TGG + chr5.4:13934223-13934242 MS.gene59487:CDS 45.0%
GTCATGTTATTCTGCGAGGA+TGG + chr5.4:13936877-13936896 MS.gene59487:CDS 45.0%
GTCTAGGTCTTTGCATCGTT+AGG + chr5.4:13937538-13937557 MS.gene59487:CDS 45.0%
GTTACCAAAAAGGAGGGTCA+GGG + chr5.4:13937858-13937877 MS.gene59487:CDS 45.0%
TAGAAGAGAGTCTCTCCAGA+AGG + chr5.4:13939020-13939039 MS.gene59487:CDS 45.0%
TAGGGTGACAAGGTCAAGAA+AGG + chr5.4:13938822-13938841 MS.gene59487:CDS 45.0%
TCCACAGCCATCTTAAGCTT+TGG - chr5.4:13934680-13934699 None:intergenic 45.0%
TGATCCTACAGTCCAAATCG+GGG + chr5.4:13937734-13937753 MS.gene59487:intron 45.0%
TGGACTGTAGGATCAACATC+GGG - chr5.4:13937729-13937748 None:intergenic 45.0%
TGGCAGGTTAATAAGATGGG+TGG + chr5.4:13937825-13937844 MS.gene59487:intron 45.0%
TGTTGCTCTGTGACATCCAT+TGG - chr5.4:13937918-13937937 None:intergenic 45.0%
TTCGGCAGCTTTACCTGTTT+GGG + chr5.4:13934472-13934491 MS.gene59487:CDS 45.0%
TTTCGGCAGCTTTACCTGTT+TGG + chr5.4:13934471-13934490 MS.gene59487:CDS 45.0%
! ACAGCCATCTTAAGCTTTGG+TGG - chr5.4:13934677-13934696 None:intergenic 45.0%
! CAAAAAAGGGGTGTGCACAA+TGG + chr5.4:13938159-13938178 MS.gene59487:CDS 45.0%
! CAGGTATTGCTTGCACTACA+AGG + chr5.4:13938100-13938119 MS.gene59487:intron 45.0%
! CATGCCAACCTTAAGGCATT+TGG - chr5.4:13939642-13939661 None:intergenic 45.0%
! CCCAAGCTTGATGAGTTGAA+AGG - chr5.4:13934256-13934275 None:intergenic 45.0%
! GTTGTTGTTGCTGTAGGTGA+TGG + chr5.4:13938949-13938968 MS.gene59487:CDS 45.0%
! TATTTCAGGCATGGAGGTAC+TGG + chr5.4:13937516-13937535 MS.gene59487:intron 45.0%
! TGGTTTGAAGTTGAGGACAC+AGG + chr5.4:13937041-13937060 MS.gene59487:CDS 45.0%
! TGTGCTTCTCTAAAGGTCTC+AGG + chr5.4:13939314-13939333 MS.gene59487:intron 45.0%
! TTCTGCAACGTCCGATTTTG+AGG + chr5.4:13933292-13933311 MS.gene59487:CDS 45.0%
!! AACGTCCGATTTTGAGGATG+TGG + chr5.4:13933298-13933317 MS.gene59487:CDS 45.0%
!! GCACAATGGAAGCATCTGAA+TGG + chr5.4:13938173-13938192 MS.gene59487:CDS 45.0%
!! GTTTGAGGTTGATGCAACCA+TGG - chr5.4:13934222-13934241 None:intergenic 45.0%
!! TCGTATGTGTTGGTGTTGTC+TGG + chr5.4:13936470-13936489 MS.gene59487:intron 45.0%
!!! CATTGTGCACACCCCTTTTT+TGG - chr5.4:13938161-13938180 None:intergenic 45.0%
ACTGTAGGATCAACATCGGG+CGG - chr5.4:13937726-13937745 None:intergenic 50.0%
ACTTGCTCAGCTTGAGATGC+AGG - chr5.4:13933402-13933421 None:intergenic 50.0%
ACTTGGGACGCGAACTTGAA+GGG + chr5.4:13936266-13936285 MS.gene59487:CDS 50.0%
AGTTAGAGGTGACTCTGGCA+GGG + chr5.4:13936641-13936660 MS.gene59487:CDS 50.0%
CCATAAAGACGGAGCTTCGT+CGG + chr5.4:13938470-13938489 MS.gene59487:CDS 50.0%
GAACCACTTGATCCTGTCAC+AGG + chr5.4:13934320-13934339 MS.gene59487:CDS 50.0%
GCCACCACCAAAGCTTAAGA+TGG + chr5.4:13934670-13934689 MS.gene59487:CDS 50.0%
GCTGGTCATGTTATTCTGCG+AGG + chr5.4:13936873-13936892 MS.gene59487:intron 50.0%
GGACTTTCACAAGTTCCGGA+TGG + chr5.4:13934398-13934417 MS.gene59487:CDS 50.0%
GGTAAAGCTGCCGAAAGCAA+AGG - chr5.4:13934467-13934486 None:intergenic 50.0%
GGTTACCAAAAAGGAGGGTC+AGG + chr5.4:13937857-13937876 MS.gene59487:CDS 50.0%
TAGCCCACTGAAATAGGCAC+CGG - chr5.4:13939351-13939370 None:intergenic 50.0%
TAGTTAGAGGTGACTCTGGC+AGG + chr5.4:13936640-13936659 MS.gene59487:CDS 50.0%
TGAAGCAAGAAGGAAGGCAG+AGG + chr5.4:13935604-13935623 MS.gene59487:CDS 50.0%
TGCCATGTAGCTACACCATC+CGG - chr5.4:13934416-13934435 None:intergenic 50.0%
TTCCGGATGGTGTAGCTACA+TGG + chr5.4:13934411-13934430 MS.gene59487:CDS 50.0%
! ATTACACTTGTGTTGGCCGG+TGG + chr5.4:13939268-13939287 MS.gene59487:intron 50.0%
! GCCATCTTAAGCTTTGGTGG+TGG - chr5.4:13934674-13934693 None:intergenic 50.0%
! GGAGCTGTTGTTGTTGCTGT+AGG + chr5.4:13938943-13938962 MS.gene59487:CDS 50.0%
! TGTTCCCTGACCCTCCTTTT+TGG - chr5.4:13937865-13937884 None:intergenic 50.0%
!! AGGTGATGGACAACAAGCAG+TGG + chr5.4:13938963-13938982 MS.gene59487:CDS 50.0%
!! CATTCCCCGATTTGGACTGT+AGG - chr5.4:13937741-13937760 None:intergenic 50.0%
!! CTGTCATGTCGGTGCTACAT+AGG + chr5.4:13936506-13936525 MS.gene59487:intron 50.0%
!! TGTAGCACCGACATGACAGA+TGG - chr5.4:13936505-13936524 None:intergenic 50.0%
!!! CCGATTTTTTCGCCTGTGAC+AGG - chr5.4:13934335-13934354 None:intergenic 50.0%
AAGACGGAGCTTCGTCGGAA+AGG + chr5.4:13938475-13938494 MS.gene59487:CDS 55.0%
AGCCCACTGAAATAGGCACC+GGG - chr5.4:13939350-13939369 None:intergenic 55.0%
CCGACGAAGCTCCGTCTTTA+TGG - chr5.4:13938473-13938492 None:intergenic 55.0%
CTGATGTCTCGACAAGGCCA+TGG - chr5.4:13934978-13934997 None:intergenic 55.0%
GAAGTTGAGGACACAGGCTG+TGG + chr5.4:13937047-13937066 MS.gene59487:CDS 55.0%
GACTTGGGACGCGAACTTGA+AGG + chr5.4:13936265-13936284 MS.gene59487:CDS 55.0%
GTCTCAGGCTCAATTCTCCC+CGG + chr5.4:13939329-13939348 MS.gene59487:intron 55.0%
GTCTCTCAAGCCAACACCAC+CGG - chr5.4:13939287-13939306 None:intergenic 55.0%
TCCCCGGTGCCTATTTCAGT+GGG + chr5.4:13939345-13939364 MS.gene59487:intron 55.0%
TCGCCTGTGACAGGATCAAG+TGG - chr5.4:13934326-13934345 None:intergenic 55.0%
! GCACCGACATGACAGATGGA+AGG - chr5.4:13936501-13936520 None:intergenic 55.0%
!! AGGCATGGAGGTACTGGTCT+AGG + chr5.4:13937522-13937541 MS.gene59487:intron 55.0%
CTCCCCGGTGCCTATTTCAG+TGG + chr5.4:13939344-13939363 MS.gene59487:intron 60.0%
TAGAGGTGACTCTGGCAGGG+TGG + chr5.4:13936644-13936663 MS.gene59487:CDS 60.0%
! CTTGTGTTGGCCGGTGGTGT+TGG + chr5.4:13939274-13939293 MS.gene59487:intron 60.0%
! GCCCACTGAAATAGGCACCG+GGG - chr5.4:13939349-13939368 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 13933186 13939739 13933186 ID=MS.gene59487
chr5.4 mRNA 13933186 13939739 13933186 ID=MS.gene59487.t1;Parent=MS.gene59487
chr5.4 exon 13933186 13933425 13933186 ID=MS.gene59487.t1.exon1;Parent=MS.gene59487.t1
chr5.4 CDS 13933186 13933425 13933186 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13934059 13934862 13934059 ID=MS.gene59487.t1.exon2;Parent=MS.gene59487.t1
chr5.4 CDS 13934059 13934862 13934059 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13935419 13935666 13935419 ID=MS.gene59487.t1.exon3;Parent=MS.gene59487.t1
chr5.4 CDS 13935419 13935666 13935419 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13935946 13936105 13935946 ID=MS.gene59487.t1.exon4;Parent=MS.gene59487.t1
chr5.4 CDS 13935946 13936105 13935946 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13936226 13936352 13936226 ID=MS.gene59487.t1.exon5;Parent=MS.gene59487.t1
chr5.4 CDS 13936226 13936352 13936226 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13936625 13936714 13936625 ID=MS.gene59487.t1.exon6;Parent=MS.gene59487.t1
chr5.4 CDS 13936625 13936714 13936625 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13936874 13937068 13936874 ID=MS.gene59487.t1.exon7;Parent=MS.gene59487.t1
chr5.4 CDS 13936874 13937068 13936874 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13937172 13937241 13937172 ID=MS.gene59487.t1.exon8;Parent=MS.gene59487.t1
chr5.4 CDS 13937172 13937241 13937172 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13937524 13937566 13937524 ID=MS.gene59487.t1.exon9;Parent=MS.gene59487.t1
chr5.4 CDS 13937524 13937566 13937524 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13937831 13937968 13937831 ID=MS.gene59487.t1.exon10;Parent=MS.gene59487.t1
chr5.4 CDS 13937831 13937968 13937831 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13938103 13939113 13938103 ID=MS.gene59487.t1.exon11;Parent=MS.gene59487.t1
chr5.4 CDS 13938103 13939113 13938103 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
chr5.4 exon 13939524 13939739 13939524 ID=MS.gene59487.t1.exon12;Parent=MS.gene59487.t1
chr5.4 CDS 13939524 13939739 13939524 ID=cds.MS.gene59487.t1;Parent=MS.gene59487.t1
Gene Sequence

>MS.gene59487

ATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAAAAATCATTGAGTAGTTTGGCGTATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATTCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAATATGTGATCAGACGTTATAGCAATCCTGCATCTCAAGCTGAGCAAGTTGAGGTTGACTCTTAATTTATTACTCATTCTGTTCTTATTGTTTTATCATTAAGTATGTGAAGTTGAGTGAATGATAATTAAGTCAGTTATGGCTAAATTGGTCTGTTTTTAAATTTTAAATATCTATGATATTGGAAATCCTTAATTACATTAGTCCTTTTGATTTGGTCAATTTAGTTATTATTTTATTTTTTTGATAAGATTGGTAGATTTAGTTATTTAAATTGTCTCAGAACGACTACTACGATCGAAATTTTCTATTTCAGAAATTATTTTAAAATTTCATTAATTTTAGTGTTGAAATTGTCTGACCTCTACTATTTCAGAGACAAATTTAACTGTTGAATAATATAGCACTATCTTAGTGGTCAAGTCATGTATTTAAATTTCATATTTATAATAATGATATAACTTTAGATTCAGTATTTTATTATTTAATATATTATATATTAGATAAAATTATGTATGAAGTGTGTGAACTTTTTCAGTATGAAATTTTTCAATCATGCTAGGTTGAATTGAAATGAAATTCAGGGAGTAAAGTATAACAAAACTTACTCTTATATTTGAGATCATATTAGTACTTATCATCCTAACCAATTTTTGTTATGTATGTCCTGCTTTTATTTGTAGCAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCACTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAACACATTTTACATCTACTCAGATCTTTCAAATTACTCCATGGTTGCATCAACCTCAAACATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGACAAAACAATTCATGGTAACTTTTCAGCAATTTGGTATAGAGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAACATAGCAGGACTTTCACAAGTTCCGGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCGGCAGCTTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTTACAACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAGTTAGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACTAGTGCACCGTTACTTACAAATTCGACTAAGCCACCACCAAAGCTTAAGATGGCTGTGGATTGTGAAGATGATATAATAAGACTTGGAGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCGTGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTATATTGACTCGTTCTACCTAAACTTGAAGAGACTTCCTTTGGTAATAATTATTAATAGACTCGTGCTTTTAAAATATTTTTAGGTGATCACCAAGGTTTTATATAAGATCCTCAACTTTGATTATGGTTGCAATGATTAAGGTTCTTATGTCTCCATGGCCTTGTCGAGACATCAGTCATATATGACCGCAATTTTTTACAAAATGTCTCCATGGCCTTGTCGAGACATCAGTCATATCTGACCGCAATTTTTTACAATATTAAAGATTTCACTTTAAAATTGAGAAAAGGCGATATGTACTGTTAGTGTAAACTAGTTTTGCACTGACATTTAATGAAAGTCTAACATTTTGTTAGTGTATACTAGTTTTACAAAATTGGATTATCTGGAAACATGATGAATTGTGATTGATGTCAGTGTAAAACTAACTTATACCGACAATGAATCTTCATTGAACTCTTTAAACTCTGGTGGTGGTCACTCTTTTTTATTCAAATAATTCTATTAAGCATAAAGTTGCAGGAAAAAAAATCTCCCTCTATTTAATTTCTGTTTTAAGTAACCAATCATTTTGTTACGACGTAAACTTTGTGCAGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAAACATTGGTTATTCTGATATCTGCATCTTTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTGAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGGTTTATTTTTTAAGTACACTTTAACAAAAAAAATTAGTACAATTCATGATATAATAAGTATTTAATTTAGAGAGCAAGGCCACCGACACATTTGTTTACATTCAATTACTTTTATTTTTAAAAATTGTTACTGGTTTCTACGTGTCATTTTCATGTCTGTGTTTCTTGAGCATATCAACATATTATAGCCGTGTCATGTCCTATAATGTTCGAATTCGGTTACATATTTTGTTCATAAATTAGCTTCATGGTTTGTTTTTTCTTGGTTTTGTATGACAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTTCTCCGTCTTCTTAACAACATATTGGATCTGAGCAAGGTATGGCATATTACATTAATAAGCTAAGCTTTTTATACAAATATAATTGAAAACCAATTGCACACATAATAAAAAACTTTCTTTCTAACAAAAAGCTTCCTAATGTTTTACACTATATAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGACTTGGGACGCGAACTTGAAGGGCTCGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGGTATGATTCTCAATTTGGTTGCAACCTATGAAGTACTGACACTGAGACGGACACTTGACACAACACTGAAATGTCCATACCGGTTATAATTTGAACAAATGAATTAATTAAATGTAATCGTATGTGTTGGTGTTGTCTGGACACTCCTTCCATCTGTCATGTCGGTGCTACATAGGTTGCATCATAGACTTTAATTTCAATGAAAGGTATTAGATGTTTTTTTAGCAAGTTTCTGATGCATTTAATTTAACCAATACCTATTTTTCATGCAGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATGTAAGTTAAAATGTGTATGTTCTAGTATAGTTACTTGGTAGTTACAATAGTGGTAGTGAAAAAATTATGAAAAAGTTTATAATCTCGAAATATGAAAAATATCACAATGAGTGTTATAAGAGACTAATCTAATTCTGAACTATTGTAAATGCATTACAGCTGGTCATGTTATTCTGCGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGTAAAGAGAAGCCAAATGCAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATGCACCTTAAAATTTACATTTCATGAACTGTCTCCTTTTGTCAAAATAAAATAAGTCCACGAATAAATCACATTTGTTTATTTCCTATGTTGTGGTATAGGTATCGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGTAAGCAATTTAATTTTTTTTAACATAGACTACATAAGAAATGAATTTGATGCAGTTATTTGTCAATGTATATAGTCAATGATCTCGGTAGTTTGTGAAGATCATACAATTGAAATTTTGGAGTTTATGAGTTGTTGAATTCATGATGTGAGTCATCTGATCTTTATCCAACGATTTAGATCAGCCGACTGCAATGACTGTAGAAATTAAGCGTCCTCAATGTTTGTTTTTTCTTACAAATGATGTGAATTTACTGATTTCTGAATCCTTTACTTATTTCAGGCATGGAGGTACTGGTCTAGGTCTTTGCATCGTTAGGAACTTGGTGAGTAAGATCTCAATGTCTAAAGTTTCAAAATAAGTAAACTATAATATCATTCTTTATTAGTGTATTTTCTGAAGAAGAAAAAAAGGCGAACAAAATCAAGATAAAAAAATTCACATTTCCTTTGGTAAACTAGGTCTAAAAGTCAAACATGAGCCGCCCGATGTTGATCCTACAGTCCAAATCGGGGAATGTGTGATTGTGTGATTGTTTTTGAGGTTGCTTATTTAAATATAAGTTCCTTTTATTTTTGTTGGATGGCAGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCAGGGAACATTGATGAGATTATGTTTGCTTCTTAGTGCACCAATGGATGTCACAGAGCAACATGCTTTAAATTTGACAGACAATGGCTTAGTGGTGAGTATATTATTCTTATTTGCAAATAATACTTTAAAATAAATATAATTCATCTTAAAAAATGTACATTTCACTAAAAGCAAGAGAAATTTAAGGATAACAAATAGGTTATTAAATACTAAGTGTGAATGCAGGTATTGCTTGCACTACAAGGCAATATGGGTAGAATAATAACATCGAAGTGGTTAACCAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAATTTATAACAATAACAACTTTGATGCACACTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGATATGAGGAATCCAATTTTTGTCATCGTTGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTTGGAAGAGCGAAATTTGTGTGGATGCTGAATCATGACACATCAAATACCATAAAGACGGAGCTTCGTCGGAAAGGACACTTACTAATGGTTAACAAACCTCTATACAAAGCAAAAATGATTCATATTTTGGAAGCTGTTATAAAAGAGAGAAATCTTGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCAATTTGAAGCTGCTACTAGCTCTGATGATTCTGATATATCTGAAATTAGTGAAAAACCAATTTTAAAGTTAACCGATGAAAATGAACATTTGGAAGAAAATAATCCAAGGGAAGAAGAATCTTGTACCTCTGAAGACAACAAAGCTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAGGAAGTGAATGATAAGAAATCACTTGAGGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGTAAGTGCTGAAGATTGTAGAAGAGAGTCTCTCCAGAAGGACAAAAATACAAGATCACAAACAGAAATTTTGACTTGCCATCAATATGATTTGATCCTAATGGATTGTCAGGTATGAACCAGAATAACAGTATTAGGACTTGTTTGAATTGACGCATTTGAGCTTATTTACTGGCATAAGCACTTGTGAAATTGTTTGACATAGGTCATGTTTGGATAAATAGTTTAATCAGGCACTTATACATAAATTATTTCTATAATATAAAATTACACTTGTGTTGGCCGGTGGTGTTGGCTTGAGAGACCTTGAAGTGTGCTTCTCTAAAGGTCTCAGGCTCAATTCTCCCCGGTGCCTATTTCAGTGGGCTAGTTTAGCTTCTTAAAAAAAAAAAAAGTCAAATTATTTTCATACAGGCTATAAAATGTTATCAAGTATTGCTCCAATAGGTAGCTTTTTTATATCTAATAAGTGAATATCAGGTTAAATATACTAATGCTTTATCTGTGTTTGTGGAAAATTAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCAAACACATTCCAATTGTTGCTCTAACAGCACATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCTTATGGTCTCAACCATTCTCTCACTCACTAAACCAACAACCTAG
Protein sequence

>MS.gene59487.t1

MLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVASTSNMVKSLSTHQAWDDKTIHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDDIIRLGAEWLQRTYGNHFPNSTREVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNASHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSAPMDVTEQHALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSIYNNNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNLELQKKNMKEGDLHEFLEIDSTQFEAATSSDDSDISEISEKPILKLTDENEHLEENNPREEESCTSEDNKAKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSAEDCRRESLQKDKNTRSQTEILTCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTT