Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65106.t1 | XP_003622954.1 | 95.4 | 394 | 18 | 0 | 5 | 398 | 40 | 433 | 1.10E-207 | 733 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65106.t1 | G7L1B6 | 95.4 | 394 | 18 | 0 | 5 | 398 | 40 | 433 | 8.2e-208 | 733.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene65106 | 0.804729 | 1.88E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene65106 | 0.819658 | 1.03E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene65106 | 0.828028 | 1.13E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene65106 | 0.854402 | 1.26E-61 | -1.69E-46 |
| MS.gene049910 | MS.gene65106 | 0.815952 | 7.10E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene65106 | 0.828632 | 8.07E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene65106 | 0.816028 | 6.83E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene65106 | 0.858175 | 9.87E-63 | -1.69E-46 |
| MS.gene050319 | MS.gene65106 | -0.802826 | 4.67E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene65106 | -0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene65106 | 0.835715 | 1.43E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene65106 | 0.856331 | 3.46E-62 | -1.69E-46 |
| MS.gene05119 | MS.gene65106 | -0.806659 | 7.39E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene65106 | 0.822109 | 2.82E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene65106 | 0.824048 | 9.97E-54 | -1.69E-46 |
| MS.gene051662 | MS.gene65106 | 0.838499 | 2.77E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene65106 | 0.861684 | 8.63E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene65106 | 0.812614 | 3.88E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene65106 | 0.817276 | 3.59E-52 | -1.69E-46 |
| MS.gene052207 | MS.gene65106 | 0.836723 | 7.92E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene65106 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene65106 | 0.831194 | 1.92E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene65106 | 0.894768 | 1.81E-75 | -1.69E-46 |
| MS.gene054473 | MS.gene65106 | 0.85002 | 2.22E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene65106 | 0.833831 | 4.26E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene65106 | 0.818647 | 1.76E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene65106 | 0.829904 | 3.97E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene65106 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene055303 | MS.gene65106 | 0.808341 | 3.25E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene65106 | 0.840848 | 6.79E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene65106 | 0.885184 | 1.01E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene65106 | 0.886143 | 4.42E-72 | -1.69E-46 |
| MS.gene055712 | MS.gene65106 | 0.836057 | 1.17E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene65106 | 0.82994 | 3.88E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene65106 | 0.807757 | 4.32E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene65106 | 0.815357 | 9.64E-52 | -1.69E-46 |
| MS.gene056931 | MS.gene65106 | 0.80178 | 7.66E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene65106 | 0.829415 | 5.21E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene65106 | 0.855729 | 5.19E-62 | -1.69E-46 |
| MS.gene057245 | MS.gene65106 | 0.833466 | 5.25E-56 | -1.69E-46 |
| MS.gene057439 | MS.gene65106 | 0.847309 | 1.25E-59 | -1.69E-46 |
| MS.gene057469 | MS.gene65106 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene65106 | 0.862675 | 4.28E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene65106 | 0.847926 | 8.49E-60 | -1.69E-46 |
| MS.gene058660 | MS.gene65106 | 0.836511 | 8.97E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene65106 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene65106 | 0.852422 | 4.66E-61 | -1.69E-46 |
| MS.gene059518 | MS.gene65106 | 0.845766 | 3.31E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene65106 | 0.856693 | 2.71E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene65106 | 0.817625 | 2.99E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene65106 | 0.814601 | 1.42E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene65106 | 0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene65106 | 0.823116 | 1.65E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene65106 | 0.834188 | 3.46E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene65106 | 0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene65106 | 0.83095 | 2.20E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene65106 | 0.837012 | 6.68E-57 | -1.69E-46 |
| MS.gene061071 | MS.gene65106 | 0.812647 | 3.82E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65106.t1 | MTR_7g058760 | 89.019 | 428 | 44 | 1 | 5 | 429 | 40 | 467 | 0.0 | 753 |
| MS.gene65106.t1 | MTR_7g058760 | 88.318 | 428 | 44 | 2 | 5 | 429 | 40 | 464 | 0.0 | 741 |
| MS.gene65106.t1 | MTR_5g004830 | 40.411 | 146 | 76 | 3 | 449 | 591 | 5 | 142 | 1.24e-30 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65106.t1 | AT5G48830 | 40.616 | 357 | 204 | 3 | 44 | 395 | 72 | 425 | 4.16e-84 | 273 |
| MS.gene65106.t1 | AT5G48830 | 40.110 | 364 | 203 | 4 | 44 | 395 | 72 | 432 | 4.55e-82 | 268 |
Find 134 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCAAGCCGAGTGTATT+TGG | 0.164191 | 7.1:+42850961 | MS.gene65106:CDS |
| CGTGACAGCTCAGACATTTC+TGG | 0.224603 | 7.1:+42851210 | MS.gene65106:CDS |
| CCTATGCCAATGCAATTTAA+AGG | 0.247757 | 7.1:-42851024 | None:intergenic |
| CAAAGGATGCTGCCAGTAAT+TGG | 0.283051 | 7.1:+42862775 | MS.gene65106:intron |
| TATAACTAAATCTTCTAAAA+TGG | 0.287288 | 7.1:-42854190 | None:intergenic |
| CACCATGGGTAGCAAATATA+CGG | 0.297562 | 7.1:-42854164 | None:intergenic |
| TTACTTTGGTATCTTACTTT+TGG | 0.298596 | 7.1:+42853438 | MS.gene65106:CDS |
| AATTCAAGCCGAGTGTATTT+GGG | 0.298989 | 7.1:+42850962 | MS.gene65106:CDS |
| CACCTGCGGCTTCCAATTAC+TGG | 0.300605 | 7.1:-42862787 | None:intergenic |
| ACTTCAAACTCGCAGTTATA+CGG | 0.304728 | 7.1:-42866849 | None:intergenic |
| TGGGAGGTGCTGATTCATTC+TGG | 0.307310 | 7.1:+42865332 | MS.gene65106:CDS |
| AAGTATATTGCTCACTTATA+TGG | 0.317130 | 7.1:+42851119 | MS.gene65106:CDS |
| CTTCTCTGCATCAACCTTAC+TGG | 0.321088 | 7.1:-42865189 | None:intergenic |
| TGGGGTTGCAAGCCTCTATC+TGG | 0.346988 | 7.1:+42854224 | MS.gene65106:CDS |
| GAGCCAACCCATTGATTTAC+CGG | 0.350122 | 7.1:+42859592 | MS.gene65106:CDS |
| TCCAAAGTTAAGGTTACTTT+GGG | 0.362833 | 7.1:+42851493 | MS.gene65106:CDS |
| GTCCAAAGTTAAGGTTACTT+TGG | 0.374599 | 7.1:+42851492 | MS.gene65106:CDS |
| GTTTAAGATGGACAGTAATC+CGG | 0.386700 | 7.1:+42865681 | MS.gene65106:CDS |
| TTGCATTGGCATAGGAGCTT+TGG | 0.387344 | 7.1:+42851032 | MS.gene65106:CDS |
| TCCACTGGTTGTACAGAAAC+AGG | 0.392162 | 7.1:-42850810 | None:intergenic |
| TCTTTGTTGCTTCTATTGCC+TGG | 0.403195 | 7.1:+42850834 | MS.gene65106:CDS |
| TTGCCGAGGGTCCAAAGTTA+AGG | 0.405993 | 7.1:+42851483 | MS.gene65106:CDS |
| TTCTATCTGTGCTACATGGC+TGG | 0.414239 | 7.1:+42852124 | MS.gene65106:CDS |
| ACCTCATGGTGGGGAGCATT+CGG | 0.414398 | 7.1:-42862840 | None:intergenic |
| ATTGTTGAAACTTACGTTCC+TGG | 0.414541 | 7.1:-42861965 | None:intergenic |
| TCTAAATGCATTAGAGAAAG+AGG | 0.418471 | 7.1:+42851403 | MS.gene65106:CDS |
| TACATTTGTTGAAGCGAGTA+AGG | 0.420870 | 7.1:+42865636 | MS.gene65106:CDS |
| CATGAGGTTGTCGTGCTTGT+TGG | 0.421324 | 7.1:+42862855 | MS.gene65106:CDS |
| ATCTGTATTCAGAATTACTT+TGG | 0.422723 | 7.1:+42853424 | MS.gene65106:CDS |
| CGGGTATAAGATTTGTCAAC+AGG | 0.422732 | 7.1:-42851153 | None:intergenic |
| CGTTTCGAGTTCTGTTGGTA+TGG | 0.426492 | 7.1:+42852055 | MS.gene65106:CDS |
| CTATGCCAATGCAATTTAAA+GGG | 0.428572 | 7.1:-42851023 | None:intergenic |
| TGGTGGAACAGCATCTAATT+TGG | 0.431361 | 7.1:+42851065 | MS.gene65106:CDS |
| ACTGCTGTCCGGTAAATCAA+TGG | 0.455287 | 7.1:-42859600 | None:intergenic |
| TTGCAGTGCGGTGCAGCAAA+AGG | 0.455706 | 7.1:+42851325 | MS.gene65106:intron |
| AGACATGGAGGAACCGGTAT+TGG | 0.457153 | 7.1:-42865290 | None:intergenic |
| TGAATGTTCGAACAAATTCA+TGG | 0.458298 | 7.1:+42865312 | MS.gene65106:CDS |
| CGAATTCCATTCCACATCAA+TGG | 0.458515 | 7.1:+42865472 | MS.gene65106:CDS |
| GCCCAAAGTAACCTTAACTT+TGG | 0.458602 | 7.1:-42851494 | None:intergenic |
| GCAGGTTCTACATCAATTTG+AGG | 0.461169 | 7.1:-42865251 | None:intergenic |
| AAAAGAAACTGATTAACAAC+TGG | 0.461741 | 7.1:-42851090 | None:intergenic |
| TGACAGATTGTTGTTTAAGA+TGG | 0.463808 | 7.1:+42865669 | MS.gene65106:CDS |
| CTGTGCTACATGGCTGGAAA+AGG | 0.463825 | 7.1:+42852130 | MS.gene65106:CDS |
| AGAAGATTTAGTTATAGCTC+TGG | 0.472303 | 7.1:+42854197 | MS.gene65106:CDS |
| CAGAAATAAACTCCAGATAG+AGG | 0.478817 | 7.1:-42854236 | None:intergenic |
| ACATTCAGACATGGAGGAAC+CGG | 0.479236 | 7.1:-42865296 | None:intergenic |
| AATGTCAGAGTCTCTTTCCC+AGG | 0.481300 | 7.1:-42865508 | None:intergenic |
| GTCAAGTAAAACAAATAGCT+TGG | 0.481670 | 7.1:+42854272 | MS.gene65106:CDS |
| GGAGCATTCGGTCGTAGCTT+CGG | 0.484166 | 7.1:-42862828 | None:intergenic |
| GCATTCCCTTTAAATTGCAT+TGG | 0.484750 | 7.1:+42851018 | MS.gene65106:CDS |
| TTTAAGATGGACAGTAATCC+GGG | 0.497303 | 7.1:+42865682 | MS.gene65106:CDS |
| GTACAGAACATTACAAGGTC+TGG | 0.502247 | 7.1:+42853393 | MS.gene65106:CDS |
| ATATTGCTCACTTATATGGC+TGG | 0.502407 | 7.1:+42851123 | MS.gene65106:CDS |
| TTAGTTATAGCTCTGGCAGA+TGG | 0.505131 | 7.1:+42854204 | MS.gene65106:CDS |
| TCCCGTATATTTGCTACCCA+TGG | 0.505444 | 7.1:+42854162 | MS.gene65106:CDS |
| GGAGCTTTGGTTGACTCTGA+TGG | 0.508159 | 7.1:+42851045 | MS.gene65106:CDS |
| CCTTTAAATTGCATTGGCAT+AGG | 0.508640 | 7.1:+42851024 | MS.gene65106:CDS |
| TTCAGGTGGCTTTGAACCAG+TGG | 0.510210 | 7.1:+42859504 | MS.gene65106:intron |
| AAAGATCCATTGATGTGGAA+TGG | 0.510519 | 7.1:-42865478 | None:intergenic |
| TATGTGCAGAAGAAATTCAT+AGG | 0.511115 | 7.1:+42865601 | MS.gene65106:CDS |
| TAGTTATAGCTCTGGCAGAT+GGG | 0.514515 | 7.1:+42854205 | MS.gene65106:CDS |
| TTCGACGGTGTTGCCTCCAC+CGG | 0.514992 | 7.1:-42866823 | None:intergenic |
| ATGCAATATTCGAATGAAGA+AGG | 0.515264 | 7.1:+42865212 | MS.gene65106:CDS |
| TAACCTTAACTTTGGACCCT+CGG | 0.519078 | 7.1:-42851486 | None:intergenic |
| GGCTCACGGTAATCATCTGC+AGG | 0.521858 | 7.1:-42865269 | None:intergenic |
| TTAGAGAAAGAGGCTTATGC+GGG | 0.522119 | 7.1:+42851413 | MS.gene65106:CDS |
| TCCTGTTTCTGTACAACCAG+TGG | 0.523707 | 7.1:+42850809 | MS.gene65106:CDS |
| AAGATGCAGTTGATGCGATC+TGG | 0.525388 | 7.1:+42865551 | MS.gene65106:CDS |
| TTGTCAGTCTGACTGCTGTC+CGG | 0.526678 | 7.1:-42859611 | None:intergenic |
| TGCAGAAGAAATTCATAGGA+AGG | 0.530136 | 7.1:+42865605 | MS.gene65106:CDS |
| TAGATTACCAGCTTATGAGT+TGG | 0.531267 | 7.1:-42865365 | None:intergenic |
| CTGCTGTCCGGTAAATCAAT+GGG | 0.534814 | 7.1:-42859599 | None:intergenic |
| GTAATCAATAACGCCGGTGG+AGG | 0.535659 | 7.1:+42866810 | MS.gene65106:CDS |
| TTGTAGCTCTGTTATGAGAA+TGG | 0.536769 | 7.1:+42865064 | MS.gene65106:CDS |
| TCAAGCGTTTCGAGTTCTGT+TGG | 0.539894 | 7.1:+42852050 | MS.gene65106:CDS |
| CACAGTTGTGTCAATGTATG+AGG | 0.540761 | 7.1:+42859544 | MS.gene65106:CDS |
| CCATGTTGTGGTACAACCAC+TGG | 0.543771 | 7.1:-42859520 | None:intergenic |
| TTCTTCTGCACATAATCACC+AGG | 0.548008 | 7.1:-42865592 | None:intergenic |
| TGCCAGTAATTGGAAGCCGC+AGG | 0.551462 | 7.1:+42862785 | MS.gene65106:CDS |
| TTTACGTCCAACTCATAAGC+TGG | 0.553121 | 7.1:+42865358 | MS.gene65106:CDS |
| GTCATTCTATCTGTGCTACA+TGG | 0.554709 | 7.1:+42852120 | MS.gene65106:CDS |
| AGTTTAAAAGCTGTTGCCGA+GGG | 0.560847 | 7.1:+42851470 | MS.gene65106:CDS |
| CAGAAGAAATTCATAGGAAG+GGG | 0.562018 | 7.1:+42865607 | MS.gene65106:CDS |
| TTCTAAAATGGAAACACCAT+GGG | 0.562854 | 7.1:-42854178 | None:intergenic |
| TGATTACCGTGAGCCAATAC+CGG | 0.564459 | 7.1:+42865277 | MS.gene65106:CDS |
| AGAAATTCATAGGAAGGGGT+TGG | 0.574152 | 7.1:+42865611 | MS.gene65106:CDS |
| AGTTATAGCTCTGGCAGATG+GGG | 0.577816 | 7.1:+42854206 | MS.gene65106:CDS |
| GAAGCGAGTAAGGTGAAAGT+TGG | 0.578483 | 7.1:+42865646 | MS.gene65106:CDS |
| CATAACAGAGCTACAAGCTG+TGG | 0.578662 | 7.1:-42865057 | None:intergenic |
| GCAGAAGAAATTCATAGGAA+GGG | 0.580030 | 7.1:+42865606 | MS.gene65106:CDS |
| GAATGTTCGAACAAATTCAT+GGG | 0.580892 | 7.1:+42865313 | MS.gene65106:CDS |
| ACAATATAACTCACGTGACA+TGG | 0.583903 | 7.1:-42859675 | None:intergenic |
| AGAGACTCTGACATTGACAT+TGG | 0.584037 | 7.1:+42865516 | MS.gene65106:CDS |
| TGTAAAAGGCAACACTCACC+AGG | 0.584076 | 7.1:+42852163 | MS.gene65106:CDS |
| ACCATGGGTAGCAAATATAC+GGG | 0.584532 | 7.1:-42854163 | None:intergenic |
| CTTCTAAAATGGAAACACCA+TGG | 0.584695 | 7.1:-42854179 | None:intergenic |
| ATTCAAGCCGAGTGTATTTG+GGG | 0.587572 | 7.1:+42850963 | MS.gene65106:CDS |
| GTCAGACTGACAAACAAAGT+TGG | 0.589106 | 7.1:+42859621 | MS.gene65106:CDS |
| TTACTGCAGTGAGTCCAGTA+AGG | 0.589344 | 7.1:+42865175 | MS.gene65106:intron |
| AAGTAAAACAAATAGCTTGG+AGG | 0.590770 | 7.1:+42854275 | MS.gene65106:CDS |
| TTAAAGGGAATGCCCGAAGA+CGG | 0.596553 | 7.1:-42851008 | None:intergenic |
| AGAAGCAACAAAGATTCCAC+TGG | 0.596892 | 7.1:-42850825 | None:intergenic |
| AAGCACGACAACCTCATGGT+GGG | 0.598906 | 7.1:-42862850 | None:intergenic |
| CCAGTGGTTGTACCACAACA+TGG | 0.599413 | 7.1:+42859520 | MS.gene65106:CDS |
| ATTAGAGAAAGAGGCTTATG+CGG | 0.602745 | 7.1:+42851412 | MS.gene65106:CDS |
| TTCGGATACAACTAGCAGTA+CGG | 0.603019 | 7.1:-42862810 | None:intergenic |
| AGACTGACAAACAAAGTTGG+TGG | 0.604196 | 7.1:+42859624 | MS.gene65106:CDS |
| TTATTGTACAGAACATTACA+AGG | 0.605422 | 7.1:+42853388 | MS.gene65106:CDS |
| CACGAAAAGATCCATTGATG+TGG | 0.608405 | 7.1:-42865483 | None:intergenic |
| CAACAAGCACGACAACCTCA+TGG | 0.611485 | 7.1:-42862854 | None:intergenic |
| TTTGTTCGAACATTCAGACA+TGG | 0.613761 | 7.1:-42865305 | None:intergenic |
| AGCACGACAACCTCATGGTG+GGG | 0.615600 | 7.1:-42862849 | None:intergenic |
| GAGTTTAAAAGCTGTTGCCG+AGG | 0.616763 | 7.1:+42851469 | MS.gene65106:CDS |
| TGAGAATGGCAACATTGAAG+AGG | 0.623240 | 7.1:+42865078 | MS.gene65106:CDS |
| GCTTTGGTTGACTCTGATGG+TGG | 0.626948 | 7.1:+42851048 | MS.gene65106:CDS |
| AACTAGCAGTACGGCACCTG+CGG | 0.629455 | 7.1:-42862801 | None:intergenic |
| GAGGAACCGGTATTGGCTCA+CGG | 0.632876 | 7.1:-42865283 | None:intergenic |
| TGTCCGGTAAATCAATGGGT+TGG | 0.635585 | 7.1:-42859595 | None:intergenic |
| ACACAACTGTGTCCATGTTG+TGG | 0.650889 | 7.1:-42859532 | None:intergenic |
| CAATATTCGAATGAAGAAGG+AGG | 0.651295 | 7.1:+42865215 | MS.gene65106:CDS |
| ATTGTAATCAATAACGCCGG+TGG | 0.653478 | 7.1:+42866807 | MS.gene65106:CDS |
| TGTGATATTGATGTTGAACC+TGG | 0.654348 | 7.1:+42865574 | MS.gene65106:CDS |
| TCTGCAGCCCCAAATACACT+CGG | 0.654793 | 7.1:-42850970 | None:intergenic |
| GCAGTTATACGGTGGTTCGA+CGG | 0.660300 | 7.1:-42866838 | None:intergenic |
| CAAGCACGACAACCTCATGG+TGG | 0.660674 | 7.1:-42862851 | None:intergenic |
| GTCAAATTATGTATTAGATG+TGG | 0.662552 | 7.1:+42851358 | MS.gene65106:CDS |
| ACAGCTCAGACATTTCTGGT+AGG | 0.677195 | 7.1:+42851214 | MS.gene65106:CDS |
| TAGAGAAAGAGGCTTATGCG+GGG | 0.683596 | 7.1:+42851414 | MS.gene65106:CDS |
| GTTCGAACATTCAGACATGG+AGG | 0.688432 | 7.1:-42865302 | None:intergenic |
| AGAGAAAGAGGCTTATGCGG+GGG | 0.688620 | 7.1:+42851415 | MS.gene65106:CDS |
| TGTTCGAACAAATTCATGGG+AGG | 0.689256 | 7.1:+42865316 | MS.gene65106:CDS |
| GCAATTGTAATCAATAACGC+CGG | 0.690508 | 7.1:+42866804 | MS.gene65106:CDS |
| ACCGAATGCTCCCCACCATG+AGG | 0.693519 | 7.1:+42862839 | MS.gene65106:CDS |
| TCAAACTCGCAGTTATACGG+TGG | 0.708422 | 7.1:-42866846 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 42850802 | 42866884 | 42850802 | ID=MS.gene65106 |
| chr7.1 | mRNA | 42850802 | 42866884 | 42850802 | ID=MS.gene65106.t1;Parent=MS.gene65106 |
| chr7.1 | exon | 42850802 | 42850855 | 42850802 | ID=MS.gene65106.t1.exon1;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42850802 | 42850855 | 42850802 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42850958 | 42851235 | 42850958 | ID=MS.gene65106.t1.exon2;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42850958 | 42851235 | 42850958 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42851331 | 42851541 | 42851331 | ID=MS.gene65106.t1.exon3;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42851331 | 42851541 | 42851331 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42852038 | 42852184 | 42852038 | ID=MS.gene65106.t1.exon4;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42852038 | 42852184 | 42852038 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42853345 | 42853469 | 42853345 | ID=MS.gene65106.t1.exon5;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42853345 | 42853469 | 42853345 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42854143 | 42854347 | 42854143 | ID=MS.gene65106.t1.exon6;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42854143 | 42854347 | 42854143 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42859509 | 42859683 | 42859509 | ID=MS.gene65106.t1.exon7;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42859509 | 42859683 | 42859509 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42861951 | 42861972 | 42861951 | ID=MS.gene65106.t1.exon8;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42861951 | 42861972 | 42861951 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42862780 | 42862876 | 42862780 | ID=MS.gene65106.t1.exon9;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42862780 | 42862876 | 42862780 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42865050 | 42865099 | 42865050 | ID=MS.gene65106.t1.exon10;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42865050 | 42865099 | 42865050 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42865184 | 42865379 | 42865184 | ID=MS.gene65106.t1.exon11;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42865184 | 42865379 | 42865184 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42865472 | 42865703 | 42865472 | ID=MS.gene65106.t1.exon12;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42865472 | 42865703 | 42865472 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| chr7.1 | exon | 42866802 | 42866884 | 42866802 | ID=MS.gene65106.t1.exon13;Parent=MS.gene65106.t1 |
| chr7.1 | CDS | 42866802 | 42866884 | 42866802 | ID=cds.MS.gene65106.t1;Parent=MS.gene65106.t1 |
| Gene Sequence |
| Protein sequence |
