Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67008.t1 | XP_003589128.1 | 96.7 | 546 | 18 | 0 | 1 | 546 | 1 | 546 | 2.10E-274 | 954.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67008.t1 | Q9S9X4 | 55.8 | 532 | 218 | 6 | 14 | 543 | 35 | 551 | 6.4e-155 | 548.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67008.t1 | Q2HTR2 | 96.7 | 546 | 18 | 0 | 1 | 546 | 1 | 546 | 1.5e-274 | 954.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene67008 | 0.838233 | 3.25E-57 | -1.69E-46 |
| MS.gene049680 | MS.gene67008 | 0.815107 | 1.10E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene67008 | 0.809756 | 1.62E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene67008 | 0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene67008 | 0.830171 | 3.41E-55 | -1.69E-46 |
| MS.gene050386 | MS.gene67008 | 0.827947 | 1.18E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene67008 | 0.864892 | 8.77E-65 | -1.69E-46 |
| MS.gene050654 | MS.gene67008 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene050689 | MS.gene67008 | 0.840831 | 6.86E-58 | -1.69E-46 |
| MS.gene050752 | MS.gene67008 | 0.831947 | 1.25E-55 | -1.69E-46 |
| MS.gene050931 | MS.gene67008 | 0.820705 | 5.96E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene67008 | 0.803435 | 3.49E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene67008 | 0.811894 | 5.57E-51 | -1.69E-46 |
| MS.gene050955 | MS.gene67008 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene67008 | 0.845582 | 3.71E-59 | -1.69E-46 |
| MS.gene051043 | MS.gene67008 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene67008 | 0.847171 | 1.37E-59 | -1.69E-46 |
| MS.gene051343 | MS.gene67008 | 0.811503 | 6.78E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene67008 | 0.830073 | 3.61E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene67008 | 0.817697 | 2.88E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene67008 | 0.80339 | 3.57E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene67008 | 0.801695 | 7.98E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene67008 | 0.861948 | 7.16E-64 | -1.69E-46 |
| MS.gene054005 | MS.gene67008 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene67008 | 0.830156 | 3.44E-55 | -1.69E-46 |
| MS.gene054709 | MS.gene67008 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene67008 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene056097 | MS.gene67008 | 0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene056578 | MS.gene67008 | 0.814071 | 1.86E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene67008 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene056881 | MS.gene67008 | 0.800646 | 1.31E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene67008 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene67008 | 0.825313 | 5.02E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene67008 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene67008 | 0.815507 | 8.92E-52 | -1.69E-46 |
| MS.gene059290 | MS.gene67008 | 0.811434 | 7.01E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene67008 | 0.816095 | 6.60E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene67008 | 0.828535 | 8.52E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene67008 | 0.833191 | 6.14E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene67008 | 0.829332 | 5.46E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67008.t1 | MTR_1g018790 | 98.901 | 546 | 6 | 0 | 1 | 546 | 1 | 546 | 0.0 | 1093 |
| MS.gene67008.t1 | MTR_4g094932 | 54.268 | 492 | 219 | 3 | 52 | 538 | 34 | 524 | 0.0 | 537 |
| MS.gene67008.t1 | MTR_2g021030 | 27.489 | 462 | 261 | 13 | 59 | 449 | 5 | 463 | 2.25e-29 | 122 |
| MS.gene67008.t1 | MTR_2g021030 | 26.171 | 363 | 224 | 12 | 98 | 453 | 245 | 570 | 7.71e-18 | 87.4 |
| MS.gene67008.t1 | MTR_2g021030 | 27.945 | 433 | 239 | 12 | 59 | 421 | 5 | 434 | 4.89e-27 | 114 |
| MS.gene67008.t1 | MTR_4g091290 | 24.375 | 480 | 252 | 18 | 57 | 443 | 19 | 480 | 3.04e-18 | 88.6 |
| MS.gene67008.t1 | MTR_7g083610 | 24.187 | 492 | 260 | 16 | 61 | 446 | 1 | 485 | 1.38e-16 | 83.2 |
| MS.gene67008.t1 | MTR_1g088950 | 21.756 | 501 | 256 | 17 | 64 | 446 | 14 | 496 | 1.07e-15 | 80.5 |
| MS.gene67008.t1 | MTR_1g114610 | 24.471 | 425 | 230 | 13 | 66 | 455 | 23 | 391 | 2.04e-15 | 79.0 |
| MS.gene67008.t1 | MTR_3g088895 | 30.806 | 211 | 139 | 5 | 257 | 462 | 77 | 285 | 5.35e-15 | 77.0 |
| MS.gene67008.t1 | MTR_4g013255 | 29.600 | 250 | 168 | 6 | 134 | 381 | 342 | 585 | 1.09e-14 | 77.4 |
| MS.gene67008.t1 | MTR_4g013255 | 26.538 | 260 | 182 | 6 | 187 | 443 | 318 | 571 | 6.15e-14 | 75.1 |
| MS.gene67008.t1 | MTR_4g013255 | 25.629 | 437 | 241 | 13 | 103 | 472 | 99 | 518 | 2.05e-11 | 67.0 |
| MS.gene67008.t1 | MTR_4g080020 | 24.307 | 469 | 248 | 15 | 54 | 470 | 3 | 416 | 2.00e-13 | 73.6 |
| MS.gene67008.t1 | MTR_8g028140 | 24.234 | 359 | 207 | 14 | 45 | 341 | 4 | 359 | 2.31e-13 | 72.4 |
| MS.gene67008.t1 | MTR_1g012520 | 24.398 | 332 | 223 | 11 | 136 | 450 | 200 | 520 | 6.86e-13 | 71.6 |
| MS.gene67008.t1 | MTR_1g012520 | 30.370 | 135 | 66 | 3 | 320 | 453 | 177 | 284 | 1.12e-11 | 67.8 |
| MS.gene67008.t1 | MTR_3g107280 | 37.143 | 140 | 82 | 4 | 320 | 453 | 143 | 282 | 7.54e-13 | 71.6 |
| MS.gene67008.t1 | MTR_3g107280 | 22.374 | 514 | 258 | 15 | 61 | 434 | 68 | 580 | 9.75e-12 | 68.2 |
| MS.gene67008.t1 | MTR_3g107280 | 30.052 | 193 | 98 | 7 | 294 | 453 | 200 | 388 | 3.75e-11 | 66.2 |
| MS.gene67008.t1 | MTR_1g054625 | 27.668 | 253 | 159 | 9 | 120 | 361 | 77 | 316 | 8.49e-13 | 70.1 |
| MS.gene67008.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 2.08e-12 | 70.1 |
| MS.gene67008.t1 | MTR_7g112570 | 23.022 | 417 | 231 | 14 | 79 | 453 | 63 | 431 | 6.54e-11 | 65.5 |
| MS.gene67008.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 2.86e-12 | 69.7 |
| MS.gene67008.t1 | MTR_7g112570 | 23.022 | 417 | 231 | 14 | 79 | 453 | 63 | 431 | 8.92e-11 | 65.1 |
| MS.gene67008.t1 | MTR_7g112570 | 26.149 | 348 | 215 | 13 | 138 | 453 | 197 | 534 | 3.57e-12 | 69.7 |
| MS.gene67008.t1 | MTR_2g104760 | 24.163 | 418 | 256 | 13 | 71 | 453 | 9 | 400 | 1.42e-11 | 67.0 |
| MS.gene67008.t1 | MTR_1g054625 | 27.511 | 229 | 127 | 6 | 138 | 361 | 25 | 219 | 1.48e-11 | 65.1 |
| MS.gene67008.t1 | MTR_4g130630 | 32.653 | 147 | 92 | 4 | 296 | 438 | 73 | 216 | 6.48e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67008.t1 | AT1G47056 | 66.322 | 484 | 157 | 4 | 55 | 536 | 34 | 513 | 0.0 | 628 |
| MS.gene67008.t1 | AT4G07400 | 61.036 | 521 | 186 | 6 | 13 | 531 | 34 | 539 | 0.0 | 605 |
| MS.gene67008.t1 | AT5G67250 | 56.169 | 543 | 208 | 6 | 1 | 538 | 1 | 518 | 0.0 | 555 |
| MS.gene67008.t1 | AT3G50080 | 56.790 | 486 | 200 | 6 | 56 | 538 | 36 | 514 | 0.0 | 531 |
| MS.gene67008.t1 | AT4G15475 | 29.394 | 330 | 211 | 13 | 127 | 447 | 274 | 590 | 2.57e-23 | 104 |
| MS.gene67008.t1 | AT4G15475 | 27.451 | 408 | 244 | 12 | 51 | 453 | 3 | 363 | 2.93e-21 | 98.2 |
| MS.gene67008.t1 | AT2G25490 | 26.107 | 429 | 273 | 16 | 61 | 453 | 64 | 484 | 7.10e-17 | 84.3 |
| MS.gene67008.t1 | AT2G25490 | 24.931 | 361 | 204 | 9 | 134 | 433 | 212 | 566 | 3.26e-14 | 75.9 |
| MS.gene67008.t1 | AT5G27920 | 27.019 | 359 | 213 | 13 | 137 | 459 | 158 | 503 | 5.67e-16 | 81.6 |
| MS.gene67008.t1 | AT5G27920 | 26.087 | 299 | 148 | 9 | 158 | 446 | 332 | 567 | 4.52e-11 | 65.9 |
| MS.gene67008.t1 | AT1G12820 | 24.590 | 427 | 252 | 13 | 61 | 443 | 1 | 401 | 7.86e-15 | 77.8 |
| MS.gene67008.t1 | AT3G26810 | 24.146 | 410 | 224 | 12 | 61 | 393 | 1 | 400 | 2.23e-14 | 76.3 |
| MS.gene67008.t1 | AT5G23340 | 25.672 | 335 | 180 | 12 | 66 | 365 | 13 | 313 | 2.79e-14 | 75.5 |
| MS.gene67008.t1 | AT5G01720 | 28.516 | 256 | 165 | 6 | 134 | 382 | 338 | 582 | 4.94e-14 | 75.5 |
| MS.gene67008.t1 | AT5G01720 | 23.577 | 492 | 265 | 17 | 64 | 452 | 16 | 499 | 2.06e-12 | 70.5 |
| MS.gene67008.t1 | AT3G07550 | 25.294 | 340 | 217 | 14 | 61 | 377 | 15 | 340 | 1.24e-13 | 73.2 |
| MS.gene67008.t1 | AT1G80570 | 24.368 | 435 | 263 | 17 | 55 | 453 | 8 | 412 | 2.88e-13 | 72.8 |
| MS.gene67008.t1 | AT1G80570 | 24.476 | 429 | 258 | 17 | 61 | 453 | 1 | 399 | 8.14e-13 | 71.2 |
| MS.gene67008.t1 | AT1G80570 | 24.476 | 429 | 258 | 17 | 61 | 453 | 1 | 399 | 8.14e-13 | 71.2 |
| MS.gene67008.t1 | AT5G25350 | 33.163 | 196 | 88 | 7 | 294 | 453 | 180 | 368 | 1.22e-12 | 70.9 |
| MS.gene67008.t1 | AT3G07550 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 2.62e-12 | 69.3 |
| MS.gene67008.t1 | AT3G07550 | 24.176 | 364 | 218 | 14 | 61 | 377 | 15 | 367 | 2.62e-12 | 69.3 |
| MS.gene67008.t1 | AT1G21410 | 27.230 | 213 | 148 | 5 | 243 | 450 | 52 | 262 | 1.97e-11 | 66.2 |
| MS.gene67008.t1 | AT1G21410 | 27.230 | 213 | 148 | 5 | 243 | 450 | 52 | 262 | 1.97e-11 | 66.2 |
| MS.gene67008.t1 | AT4G03190 | 21.224 | 490 | 272 | 14 | 64 | 446 | 5 | 487 | 4.95e-11 | 65.9 |
Find 0 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGGTAGATCTGATATATAAT+CGG | - | 8722:10716-10735 | None:intergenic | 25.0% |
| ! | TATTTCGAATTGTTCGAATT+TGG | + | 8722:11443-11462 | MS.gene67008:CDS | 25.0% |
| ! | TGTTTGAAGGAACTTTATAA+TGG | + | 8722:11249-11268 | MS.gene67008:CDS | 25.0% |
| CAGAAAGATGTAAGTTGTTA+AGG | + | 8722:11523-11542 | MS.gene67008:CDS | 30.0% | |
| TCAAATCGATTAAACAGAGA+AGG | - | 8722:10886-10905 | None:intergenic | 30.0% | |
| TTAAACAGAGAAGGAATTAC+CGG | - | 8722:10877-10896 | None:intergenic | 30.0% | |
| TTAAGGAAGCTACATATTGA+TGG | + | 8722:11540-11559 | MS.gene67008:CDS | 30.0% | |
| ! | AGCTTTTGCTAAGAATTGTA+AGG | + | 8722:11050-11069 | MS.gene67008:CDS | 30.0% |
| ! | GCTTTTGCTAAGAATTGTAA+GGG | + | 8722:11051-11070 | MS.gene67008:CDS | 30.0% |
| ! | TCTTGTACTTTTGGATCTAA+AGG | + | 8722:11096-11115 | MS.gene67008:CDS | 30.0% |
| !!! | CTTTATAATGGACAGTGTTT+TGG | + | 8722:11261-11280 | MS.gene67008:CDS | 30.0% |
| !!! | TGTTTTGGTTCGTTGATTTT+AGG | + | 8722:11276-11295 | MS.gene67008:CDS | 30.0% |
| AAAGCCAATCTCTCTAGATT+CGG | - | 8722:11696-11715 | None:intergenic | 35.0% | |
| ACAATCGCTAAACATTCATC+AGG | - | 8722:10736-10755 | None:intergenic | 35.0% | |
| ACCTTCACTTTCACCAAATT+GGG | - | 8722:11849-11868 | None:intergenic | 35.0% | |
| AGCACCAATTCTTGCAAATT+AGG | - | 8722:11621-11640 | None:intergenic | 35.0% | |
| AGGCTTCAGATTAGTGATAT+TGG | + | 8722:11411-11430 | MS.gene67008:CDS | 35.0% | |
| AGTTCATTCAAGCAAAGGTT+AGG | + | 8722:12083-12102 | MS.gene67008:CDS | 35.0% | |
| CTAAGAATTGTAAGGGTTTG+AGG | + | 8722:11058-11077 | MS.gene67008:CDS | 35.0% | |
| GCACCAATTCTTGCAAATTA+GGG | - | 8722:11620-11639 | None:intergenic | 35.0% | |
| GTTCATTCAAGCAAAGGTTA+GGG | + | 8722:12084-12103 | MS.gene67008:CDS | 35.0% | |
| ! | GTTGAAGACGATTTGTTTGA+AGG | + | 8722:11236-11255 | MS.gene67008:CDS | 35.0% |
| ! | TTGAAGCTATTTCGATGTTC+CGG | + | 8722:11318-11337 | MS.gene67008:CDS | 35.0% |
| ! | TTGCAAGAATTGGTGCTTAT+TGG | + | 8722:11624-11643 | MS.gene67008:CDS | 35.0% |
| ! | TTGCCCTAATTTGCAAGAAT+TGG | + | 8722:11614-11633 | MS.gene67008:CDS | 35.0% |
| ! | TTGTTGAGGTTCATTTTGAG+AGG | + | 8722:11391-11410 | MS.gene67008:CDS | 35.0% |
| !!! | ATCTGTTGGTTTTGGTAGAT+CGG | - | 8722:10600-10619 | None:intergenic | 35.0% |
| AAGCCAATCTCTCTAGATTC+GGG | - | 8722:11695-11714 | None:intergenic | 40.0% | |
| AAGTCCCATATCAGTACACT+CGG | - | 8722:11493-11512 | None:intergenic | 40.0% | |
| AGTTGTTGAATCCCTCTGAT+CGG | + | 8722:10761-10780 | MS.gene67008:CDS | 40.0% | |
| ATTGAATTTCCTGCAATGCC+CGG | + | 8722:12008-12027 | MS.gene67008:CDS | 40.0% | |
| ATTTCCAAACTCACTCTCGT+AGG | - | 8722:11657-11676 | None:intergenic | 40.0% | |
| ATTTCGATGTTCCGGTGATT+GGG | + | 8722:11326-11345 | MS.gene67008:CDS | 40.0% | |
| GACCTTCACTTTCACCAAAT+TGG | - | 8722:11850-11869 | None:intergenic | 40.0% | |
| GAGAGTGAGTTTGGAAATGT+TGG | + | 8722:11659-11678 | MS.gene67008:CDS | 40.0% | |
| GATCGAGTTCATTCAAGCAA+AGG | + | 8722:12078-12097 | MS.gene67008:CDS | 40.0% | |
| GGAAGCTACATATTGATGGA+TGG | + | 8722:11544-11563 | MS.gene67008:CDS | 40.0% | |
| GGTTTGAGGAAATTATCGTG+TGG | + | 8722:11072-11091 | MS.gene67008:CDS | 40.0% | |
| TATTTCGATGTTCCGGTGAT+TGG | + | 8722:11325-11344 | MS.gene67008:CDS | 40.0% | |
| TTGTGTGCAAGTGATACTGT+TGG | + | 8722:11714-11733 | MS.gene67008:CDS | 40.0% | |
| TTTCCAAACTCACTCTCGTA+GGG | - | 8722:11656-11675 | None:intergenic | 40.0% | |
| ! | AAAAAGCGTATCCCAATCAC+CGG | - | 8722:11340-11359 | None:intergenic | 40.0% |
| ! | AGTGAAGGTCAAGAAGTGTA+AGG | + | 8722:11860-11879 | MS.gene67008:CDS | 40.0% |
| ! | GCTACATATTGATGGATGGA+AGG | + | 8722:11548-11567 | MS.gene67008:CDS | 40.0% |
| ! | GTGAAGGTCAAGAAGTGTAA+GGG | + | 8722:11861-11880 | MS.gene67008:CDS | 40.0% |
| ! | TCCCAATTTGGTGAAAGTGA+AGG | + | 8722:11845-11864 | MS.gene67008:CDS | 40.0% |
| ! | TCGTGTGGATCTTGTACTTT+TGG | + | 8722:11087-11106 | MS.gene67008:CDS | 40.0% |
| ! | TGGATCTAAAGGTATGAACG+CGG | + | 8722:11107-11126 | MS.gene67008:CDS | 40.0% |
| ! | TTGATGGATGGAAGGCAAAT+CGG | + | 8722:11556-11575 | MS.gene67008:CDS | 40.0% |
| ! | TTGCATTGCTGCAAAGTGTT+TGG | + | 8722:11752-11771 | MS.gene67008:CDS | 40.0% |
| !! | AGTTGTCCTGTTTCTGATCT+TGG | + | 8722:11798-11817 | MS.gene67008:CDS | 40.0% |
| !! | GGATACGCTTTTTACGCTTA+TGG | + | 8722:11347-11366 | MS.gene67008:CDS | 40.0% |
| !! | GTTGTCCTGTTTCTGATCTT+GGG | + | 8722:11799-11818 | MS.gene67008:CDS | 40.0% |
| AGTCCCATATCAGTACACTC+GGG | - | 8722:11492-11511 | None:intergenic | 45.0% | |
| AGTGGCGAGTATGATTGTTG+AGG | + | 8722:11377-11396 | MS.gene67008:CDS | 45.0% | |
| ATCAGTGTTCACTCGTTTGC+CGG | + | 8722:10785-10804 | MS.gene67008:CDS | 45.0% | |
| CAAGATGCTAGTGCTAGTGA+TGG | + | 8722:11966-11985 | MS.gene67008:CDS | 45.0% | |
| CGCGAAGTTTGATCTTCTTC+CGG | + | 8722:10855-10874 | MS.gene67008:CDS | 45.0% | |
| GCAGCAATGCAAGATATCTC+AGG | - | 8722:11744-11763 | None:intergenic | 45.0% | |
| GGTTTCTGTAGCTGTGAATC+TGG | + | 8722:11923-11942 | MS.gene67008:CDS | 45.0% | |
| TAACCCTACGAGAGTGAGTT+TGG | + | 8722:11650-11669 | MS.gene67008:CDS | 45.0% | |
| TACGCTTATGGCTGAAAGAG+TGG | + | 8722:11359-11378 | MS.gene67008:CDS | 45.0% | |
| TCCATCCCAAGATCAGAAAC+AGG | - | 8722:11807-11826 | None:intergenic | 45.0% | |
| TGATCTTGGGATGGAAGCTT+TGG | + | 8722:11812-11831 | MS.gene67008:CDS | 45.0% | |
| TGGCGATGAAGGGTTAATTG+CGG | + | 8722:11581-11600 | MS.gene67008:CDS | 45.0% | |
| TTGAAGGACAGAGTCGTCAA+CGG | + | 8722:10821-10840 | MS.gene67008:CDS | 45.0% | |
| TTGCCCGAATCTAGAGAGAT+TGG | + | 8722:11689-11708 | MS.gene67008:CDS | 45.0% | |
| ! | ACACCCGAGTGTACTGATAT+GGG | + | 8722:11486-11505 | MS.gene67008:CDS | 45.0% |
| ! | ACTTTGAGAAGATGGTCAGG+TGG | + | 8722:12137-12156 | MS.gene67008:CDS | 45.0% |
| ! | AGCACTTTGAGAAGATGGTC+AGG | + | 8722:12134-12153 | MS.gene67008:CDS | 45.0% |
| ! | ATGGTGGAGCACAAGAGAAT+GGG | + | 8722:11985-12004 | MS.gene67008:CDS | 45.0% |
| ! | GGATGGAAGCTTTGGCAAAT+GGG | + | 8722:11820-11839 | MS.gene67008:CDS | 45.0% |
| ! | TGGCTAGCACTTTGAGAAGA+TGG | + | 8722:12129-12148 | MS.gene67008:CDS | 45.0% |
| !! | CAAATCGGATTGGCGATGAA+GGG | + | 8722:11571-11590 | MS.gene67008:CDS | 45.0% |
| !! | GAACACTGATTCCGATCAGA+GGG | - | 8722:10775-10794 | None:intergenic | 45.0% |
| !! | TCCTGTTTCTGATCTTGGGA+TGG | + | 8722:11803-11822 | MS.gene67008:CDS | 45.0% |
| !! | TGAACACTGATTCCGATCAG+AGG | - | 8722:10776-10795 | None:intergenic | 45.0% |
| !! | TGTAAGGGTGTTACACCTGA+AGG | + | 8722:11876-11895 | MS.gene67008:CDS | 45.0% |
| AAAGGTTAGGGCTACTGTCC+GGG | + | 8722:12096-12115 | MS.gene67008:CDS | 50.0% | |
| AATCGTCTTCAACGACGCAG+CGG | - | 8722:11229-11248 | None:intergenic | 50.0% | |
| AATTGTCGGTGAAGCGGCTT+AGG | + | 8722:11157-11176 | MS.gene67008:CDS | 50.0% | |
| ACTGTCCGGGAGGAAAATTG+TGG | + | 8722:12109-12128 | MS.gene67008:CDS | 50.0% | |
| AGCTTAAGGCGCGTGAGATT+AGG | - | 8722:10994-11013 | None:intergenic | 50.0% | |
| ATTGTCGGTGAAGCGGCTTA+GGG | + | 8722:11158-11177 | MS.gene67008:CDS | 50.0% | |
| ATTTGCCGATGTAGATGCCG+CGG | - | 8722:12036-12055 | None:intergenic | 50.0% | |
| CAAAGGTTAGGGCTACTGTC+CGG | + | 8722:12095-12114 | MS.gene67008:CDS | 50.0% | |
| CGAACTTACGGATGCTGGAA+TGG | + | 8722:11026-11045 | MS.gene67008:CDS | 50.0% | |
| GATCATCGGAGAAACCAAGG+CGG | - | 8722:10626-10645 | None:intergenic | 50.0% | |
| GATGCTAGTGCTAGTGATGG+TGG | + | 8722:11969-11988 | MS.gene67008:CDS | 50.0% | |
| GATGTTGCAGATCCGGTTGA+CGG | + | 8722:10664-10683 | MS.gene67008:CDS | 50.0% | |
| GGAGATCATCGGAGAAACCA+AGG | - | 8722:10629-10648 | None:intergenic | 50.0% | |
| GGATGGAAGGCAAATCGGAT+TGG | + | 8722:11561-11580 | MS.gene67008:CDS | 50.0% | |
| GGCAAATGGGTGTCCCAATT+TGG | + | 8722:11833-11852 | MS.gene67008:CDS | 50.0% | |
| TAGGGGAATTGCTGAGACTG+CGG | + | 8722:11176-11195 | MS.gene67008:CDS | 50.0% | |
| TCGAGGAATTGTCGGTGAAG+CGG | + | 8722:11151-11170 | MS.gene67008:CDS | 50.0% | |
| TGTAGCTGTGAATCTGGACG+CGG | + | 8722:11929-11948 | MS.gene67008:CDS | 50.0% | |
| TTACACCTGAAGGTGGGGAT+TGG | + | 8722:11886-11905 | MS.gene67008:CDS | 50.0% | |
| ! | AGGGTGTTACACCTGAAGGT+GGG | + | 8722:11880-11899 | MS.gene67008:CDS | 50.0% |
| ! | GACACCCGAGTGTACTGATA+TGG | + | 8722:11485-11504 | MS.gene67008:CDS | 50.0% |
| ! | GCTAGCCACAATTTTCCTCC+CGG | - | 8722:12117-12136 | None:intergenic | 50.0% |
| ! | GGGATGGAAGCTTTGGCAAA+TGG | + | 8722:11819-11838 | MS.gene67008:CDS | 50.0% |
| !! | AAGGGTGTTACACCTGAAGG+TGG | + | 8722:11879-11898 | MS.gene67008:CDS | 50.0% |
| !! | GATGGTGGAGCACAAGAGAA+TGG | + | 8722:11984-12003 | MS.gene67008:CDS | 50.0% |
| !! | GCAAATCGGATTGGCGATGA+AGG | + | 8722:11570-11589 | MS.gene67008:CDS | 50.0% |
| !! | GGATTGGTTGAGGCACACTA+GGG | + | 8722:11902-11921 | MS.gene67008:CDS | 50.0% |
| AACCAACAGATCCACCGCCT+TGG | + | 8722:10609-10628 | MS.gene67008:CDS | 55.0% | |
| AACCAAGGCGGTGGATCTGT+TGG | - | 8722:10614-10633 | None:intergenic | 55.0% | |
| AGTGTTCACTCGTTTGCCGG+CGG | + | 8722:10788-10807 | MS.gene67008:CDS | 55.0% | |
| ATCGGTTGCCTGCACTTTCC+CGG | - | 8722:10582-10601 | None:intergenic | 55.0% | |
| CGGTGACGATGTTGCAGATC+CGG | + | 8722:10657-10676 | MS.gene67008:CDS | 55.0% | |
| CTCAACCAATCCCCACCTTC+AGG | - | 8722:11894-11913 | None:intergenic | 55.0% | |
| TCGTTACCGTCACCGTCAAC+CGG | - | 8722:10679-10698 | None:intergenic | 55.0% | |
| TGAAAATTGCGCTGCGCTCG+AGG | + | 8722:11134-11153 | MS.gene67008:CDS | 55.0% | |
| TGCAACATCGTCACCGTCGT+CGG | - | 8722:10653-10672 | None:intergenic | 55.0% | |
| TGTCGCGAACTTACGGATGC+TGG | + | 8722:11021-11040 | MS.gene67008:CDS | 55.0% | |
| TTGTCGGTGAAGCGGCTTAG+GGG | + | 8722:11159-11178 | MS.gene67008:CDS | 55.0% | |
| ! | GGGTGTTACACCTGAAGGTG+GGG | + | 8722:11881-11900 | MS.gene67008:CDS | 55.0% |
| ! | GGTGACGGTAACGACGGAAT+CGG | + | 8722:10685-10704 | MS.gene67008:CDS | 55.0% |
| ! | GTTGACGGTGACGGTAACGA+CGG | + | 8722:10679-10698 | MS.gene67008:CDS | 55.0% |
| !! | CTGAAGGTGGGGATTGGTTG+AGG | + | 8722:11892-11911 | MS.gene67008:CDS | 55.0% |
| !! | GGGATTGGTTGAGGCACACT+AGG | + | 8722:11901-11920 | MS.gene67008:CDS | 55.0% |
| !!! | GGCGGTGGATCTGTTGGTTT+TGG | - | 8722:10608-10627 | None:intergenic | 55.0% |
| AACATCGTCACCGTCGTCGG+TGG | - | 8722:10650-10669 | None:intergenic | 60.0% | |
| CAAGCAGCTTCCACGGTCAC+CGG | + | 8722:10547-10566 | MS.gene67008:CDS | 60.0% | |
| CATCGGAGAAACCAAGGCGG+TGG | - | 8722:10623-10642 | None:intergenic | 60.0% | |
| CCGATGATCTCCACCGACGA+CGG | + | 8722:10637-10656 | MS.gene67008:CDS | 60.0% | |
| CCGTCGTCGGTGGAGATCAT+CGG | - | 8722:10640-10659 | None:intergenic | 60.0% | |
| CGCTGCGCTCGAGGAATTGT+CGG | + | 8722:11143-11162 | MS.gene67008:CDS | 60.0% | |
| CTTCAACGTGAAGCCACCGC+CGG | - | 8722:10807-10826 | None:intergenic | 60.0% | |
| GCAGATCCGGTTGACGGTGA+CGG | + | 8722:10670-10689 | MS.gene67008:CDS | 60.0% | |
| GGGAATTGCTGAGACTGCGG+TGG | + | 8722:11179-11198 | MS.gene67008:CDS | 60.0% | |
| ! | ACTTTCCCGGCGGTTGGTTC+CGG | - | 8722:10569-10588 | None:intergenic | 60.0% |
| ACTGCGGTGGCTGAGCCGAT+TGG | + | 8722:11192-11211 | MS.gene67008:CDS | 65.0% | |
| CCGCGCGTGTCGCGAACTTA+CGG | + | 8722:11014-11033 | MS.gene67008:CDS | 65.0% | |
| CCGTAAGTTCGCGACACGCG+CGG | - | 8722:11017-11036 | None:intergenic | 65.0% | |
| CGATGTAGATGCCGCGGAGC+CGG | - | 8722:12030-12049 | None:intergenic | 65.0% | |
| CGGCGGTGGCTTCACGTTGA+AGG | + | 8722:10805-10824 | MS.gene67008:CDS | 65.0% | |
| CGGCTCCGCGGCATCTACAT+CGG | + | 8722:12028-12047 | MS.gene67008:CDS | 65.0% | |
| CGGTGACCGTGGAAGCTGCT+TGG | - | 8722:10549-10568 | None:intergenic | 65.0% | |
| GATGTAGATGCCGCGGAGCC+GGG | - | 8722:12029-12048 | None:intergenic | 65.0% | |
| GGTGGCTGAGCCGATTGGAC+CGG | + | 8722:11197-11216 | MS.gene67008:CDS | 65.0% | |
| GGTTAGGGCTACTGTCCGGG+AGG | + | 8722:12099-12118 | MS.gene67008:CDS | 65.0% | |
| GGTTGCCTGCACTTTCCCGG+CGG | - | 8722:10579-10598 | None:intergenic | 65.0% | |
| GTGGCTGAGCCGATTGGACC+GGG | + | 8722:11198-11217 | MS.gene67008:CDS | 65.0% | |
| GTTCACTCGTTTGCCGGCGG+TGG | + | 8722:10791-10810 | MS.gene67008:CDS | 65.0% | |
| TGAGCCGATTGGACCGGGTG+TGG | + | 8722:11203-11222 | MS.gene67008:CDS | 65.0% | |
| ! | ACCAACCGCCGGGAAAGTGC+AGG | + | 8722:10571-10590 | MS.gene67008:CDS | 65.0% |
| AACGACGCAGCGGCCACACC+CGG | - | 8722:11219-11238 | None:intergenic | 70.0% | |
| CGCGACACGCGCGGAGCTTA+AGG | - | 8722:11008-11027 | None:intergenic | 70.0% | |
| CGGTCACCGGAACCAACCGC+CGG | + | 8722:10560-10579 | MS.gene67008:CDS | 70.0% | |
| GCCTGCACTTTCCCGGCGGT+TGG | - | 8722:10575-10594 | None:intergenic | 70.0% | |
| GCGGCCACACCCGGTCCAAT+CGG | - | 8722:11210-11229 | None:intergenic | 70.0% | |
| GGTCACCGGAACCAACCGCC+GGG | + | 8722:10561-10580 | MS.gene67008:CDS | 70.0% | |
| TCCTGCAATGCCCGGCTCCG+CGG | + | 8722:12016-12035 | MS.gene67008:CDS | 70.0% | |
| ! | GCGGTTGGTTCCGGTGACCG+TGG | - | 8722:10560-10579 | None:intergenic | 70.0% |
| !! | GCCGCGGAGCCGGGCATTGC+AGG | - | 8722:12020-12039 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8722 | gene | 10541 | 12179 | 10541 | ID=MS.gene67008 |
| 8722 | mRNA | 10541 | 12179 | 10541 | ID=MS.gene67008.t1;Parent=MS.gene67008 |
| 8722 | exon | 10541 | 12179 | 10541 | ID=MS.gene67008.t1.exon1;Parent=MS.gene67008.t1 |
| 8722 | CDS | 10541 | 12179 | 10541 | ID=cds.MS.gene67008.t1;Parent=MS.gene67008.t1 |
| Gene Sequence |
| Protein sequence |
