Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67131.t1 | XP_003589192.1 | 92.1 | 919 | 72 | 1 | 1 | 918 | 1 | 919 | 0.00E+00 | 1126.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67131.t1 | O48724 | 56.4 | 698 | 272 | 9 | 242 | 913 | 114 | 805 | 5.9e-52 | 207.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67131.t1 | G7I3K8 | 92.1 | 919 | 72 | 1 | 1 | 918 | 1 | 919 | 0.0e+00 | 1126.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene67131 | 0.822038 | 2.93E-53 | -1.69E-46 |
| MS.gene049182 | MS.gene67131 | 0.844222 | 8.64E-59 | -1.69E-46 |
| MS.gene050379 | MS.gene67131 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene050416 | MS.gene67131 | 0.832924 | 7.16E-56 | -1.69E-46 |
| MS.gene050961 | MS.gene67131 | 0.811816 | 5.80E-51 | -1.69E-46 |
| MS.gene05156 | MS.gene67131 | 0.818691 | 1.72E-52 | -1.69E-46 |
| MS.gene051959 | MS.gene67131 | 0.837983 | 3.77E-57 | -1.69E-46 |
| MS.gene051960 | MS.gene67131 | 0.842384 | 2.67E-58 | -1.69E-46 |
| MS.gene052040 | MS.gene67131 | 0.865936 | 4.11E-65 | -1.69E-46 |
| MS.gene052053 | MS.gene67131 | 0.838016 | 3.69E-57 | -1.69E-46 |
| MS.gene052560 | MS.gene67131 | 0.81558 | 8.59E-52 | -1.69E-46 |
| MS.gene052570 | MS.gene67131 | 0.82287 | 1.88E-53 | -1.69E-46 |
| MS.gene052579 | MS.gene67131 | 0.857584 | 1.48E-62 | -1.69E-46 |
| MS.gene053602 | MS.gene67131 | 0.847626 | 1.03E-59 | -1.69E-46 |
| MS.gene055150 | MS.gene67131 | 0.851754 | 7.22E-61 | -1.69E-46 |
| MS.gene055333 | MS.gene67131 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene055634 | MS.gene67131 | -0.807894 | 4.04E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene67131 | 0.803829 | 2.89E-49 | -1.69E-46 |
| MS.gene05624 | MS.gene67131 | 0.824196 | 9.20E-54 | -1.69E-46 |
| MS.gene056361 | MS.gene67131 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene056530 | MS.gene67131 | 0.835199 | 1.93E-56 | -1.69E-46 |
| MS.gene057001 | MS.gene67131 | 0.810987 | 8.77E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene67131 | -0.863273 | 2.80E-64 | -1.69E-46 |
| MS.gene057472 | MS.gene67131 | 0.841551 | 4.44E-58 | -1.69E-46 |
| MS.gene05878 | MS.gene67131 | 0.804704 | 1.90E-49 | -1.69E-46 |
| MS.gene05884 | MS.gene67131 | 0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene059436 | MS.gene67131 | 0.844967 | 5.45E-59 | -1.69E-46 |
| MS.gene059514 | MS.gene67131 | 0.814925 | 1.20E-51 | -1.69E-46 |
| MS.gene05952 | MS.gene67131 | 0.825894 | 3.65E-54 | -1.69E-46 |
| MS.gene059698 | MS.gene67131 | 0.805353 | 1.39E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene67131 | -0.806238 | 9.06E-50 | -1.69E-46 |
| MS.gene060237 | MS.gene67131 | 0.845461 | 4.00E-59 | -1.69E-46 |
| MS.gene060282 | MS.gene67131 | 0.806188 | 9.29E-50 | -1.69E-46 |
| MS.gene060338 | MS.gene67131 | 0.850119 | 2.09E-60 | -1.69E-46 |
| MS.gene060522 | MS.gene67131 | 0.838369 | 3.00E-57 | -1.69E-46 |
| MS.gene060906 | MS.gene67131 | 0.806658 | 7.39E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67131.t1 | MTR_1g019490 | 95.647 | 919 | 39 | 1 | 1 | 918 | 1 | 919 | 0.0 | 1711 |
| MS.gene67131.t1 | MTR_3g101660 | 65.535 | 766 | 239 | 6 | 167 | 918 | 193 | 947 | 0.0 | 922 |
| MS.gene67131.t1 | MTR_8g070840 | 47.807 | 684 | 291 | 12 | 246 | 915 | 3 | 634 | 2.06e-154 | 469 |
| MS.gene67131.t1 | MTR_3g060660 | 27.101 | 690 | 431 | 15 | 249 | 918 | 4 | 641 | 2.63e-27 | 119 |
| MS.gene67131.t1 | MTR_2g027130 | 26.777 | 605 | 372 | 17 | 252 | 833 | 7 | 563 | 3.02e-23 | 105 |
| MS.gene67131.t1 | MTR_7g072550 | 30.712 | 267 | 175 | 6 | 575 | 839 | 177 | 435 | 2.74e-19 | 93.2 |
| MS.gene67131.t1 | MTR_7g072550 | 43.925 | 107 | 56 | 3 | 260 | 362 | 18 | 124 | 8.58e-11 | 66.2 |
| MS.gene67131.t1 | MTR_4g029090 | 32.075 | 265 | 174 | 2 | 574 | 837 | 164 | 423 | 2.97e-19 | 93.2 |
| MS.gene67131.t1 | MTR_3g060660 | 26.282 | 624 | 395 | 12 | 311 | 918 | 56 | 630 | 9.06e-19 | 92.0 |
| MS.gene67131.t1 | MTR_5g096080 | 25.526 | 666 | 439 | 14 | 272 | 918 | 21 | 648 | 8.25e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67131.t1 | AT2G26570 | 60.832 | 697 | 241 | 10 | 243 | 913 | 115 | 805 | 0.0 | 756 |
| MS.gene67131.t1 | AT2G26570 | 60.832 | 697 | 241 | 10 | 243 | 913 | 115 | 805 | 0.0 | 756 |
| MS.gene67131.t1 | AT4G33390 | 57.960 | 647 | 247 | 5 | 271 | 913 | 153 | 778 | 0.0 | 642 |
| MS.gene67131.t1 | AT5G42880 | 46.211 | 673 | 301 | 8 | 257 | 913 | 121 | 748 | 1.82e-157 | 481 |
| MS.gene67131.t1 | AT1G45545 | 44.209 | 708 | 332 | 7 | 220 | 912 | 90 | 749 | 7.65e-150 | 461 |
| MS.gene67131.t1 | AT1G45545 | 44.209 | 708 | 332 | 7 | 220 | 912 | 91 | 750 | 8.40e-150 | 461 |
| MS.gene67131.t1 | AT5G55860 | 25.688 | 654 | 431 | 13 | 272 | 911 | 20 | 632 | 1.53e-15 | 81.6 |
| MS.gene67131.t1 | AT1G12150 | 24.248 | 565 | 379 | 12 | 272 | 830 | 19 | 540 | 1.82e-11 | 68.2 |
| MS.gene67131.t1 | AT1G12150 | 24.248 | 565 | 379 | 12 | 272 | 830 | 19 | 540 | 1.82e-11 | 68.2 |
| MS.gene67131.t1 | AT2G38370 | 25.000 | 344 | 215 | 8 | 528 | 864 | 109 | 416 | 9.72e-11 | 65.9 |
Find 153 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTGGTTTACTACATTT+TGG | 0.153241 | 1.3:-4039243 | None:intergenic |
| CTCCATCATCGTCTCCTTCT+TGG | 0.165235 | 1.3:-4038349 | None:intergenic |
| GGGGCATCTGCTAGTGAATT+TGG | 0.237130 | 1.3:-4036526 | None:intergenic |
| GATCTAACGGCTTCATCTTC+TGG | 0.244045 | 1.3:+4037257 | MS.gene67131:CDS |
| TTCTGAGGTAAATTACTTAA+AGG | 0.258185 | 1.3:+4038475 | MS.gene67131:CDS |
| GGTCATGCAAACAATGAAAA+TGG | 0.264151 | 1.3:+4039343 | MS.gene67131:CDS |
| CGGAGAAAAGCCGGTGAAAT+AGG | 0.268026 | 1.3:+4039220 | MS.gene67131:CDS |
| GATTGCCACAAAAGAGTCTT+TGG | 0.270589 | 1.3:+4038091 | MS.gene67131:CDS |
| TCATGAACTGTTTCTTCTTT+CGG | 0.275067 | 1.3:-4036763 | None:intergenic |
| GCTTCTTTAGTTGATGAAAA+AGG | 0.275514 | 1.3:+4037987 | MS.gene67131:CDS |
| AAGGAAGCTGTTTCTAAGTT+TGG | 0.278467 | 1.3:+4037440 | MS.gene67131:CDS |
| AAAGCACATCCAACTCATTC+AGG | 0.287960 | 1.3:+4039445 | MS.gene67131:CDS |
| GACGCTTCTTGAAGCTTCTT+TGG | 0.305159 | 1.3:-4038683 | None:intergenic |
| GAGATCAAGATTCTCTCAAT+TGG | 0.317442 | 1.3:+4038174 | MS.gene67131:CDS |
| AGCTGAGTTAAATGCCTATA+TGG | 0.326058 | 1.3:+4038313 | MS.gene67131:CDS |
| TACCACTATGATTTATGTTC+TGG | 0.328707 | 1.3:-4039258 | None:intergenic |
| TGCCGTTGCAATTCTCGAAT+TGG | 0.338661 | 1.3:-4039011 | None:intergenic |
| TTTATCATCTAGTGAGTTGA+TGG | 0.341644 | 1.3:-4036608 | None:intergenic |
| AGCAGTTGAGTCGGCCAAAA+AGG | 0.354376 | 1.3:+4038415 | MS.gene67131:CDS |
| AAGGCAAGGGAAGGAAAATT+AGG | 0.367717 | 1.3:+4039154 | MS.gene67131:CDS |
| GTTTGACTTTGATTCCATAT+AGG | 0.370779 | 1.3:-4038327 | None:intergenic |
| GATAGTATCACACCATTTGA+TGG | 0.385892 | 1.3:-4038935 | None:intergenic |
| TTGCCTTGCTTGATGCTCTT+CGG | 0.398129 | 1.3:-4037796 | None:intergenic |
| GGCACTCGTATACCTTGCTT+TGG | 0.399846 | 1.3:-4037910 | None:intergenic |
| CGATGCAGCAACAGCATCTT+CGG | 0.403753 | 1.3:-4038027 | None:intergenic |
| CTTCGGTTTGTGCCCTCTCT+AGG | 0.404658 | 1.3:-4037779 | None:intergenic |
| ATCTGCACATTCTGCACATA+TGG | 0.405198 | 1.3:+4038115 | MS.gene67131:CDS |
| TTCGATGGAAGAGTCATTAT+CGG | 0.407175 | 1.3:-4036581 | None:intergenic |
| GGTTGGAGCTGTTATTATAT+CGG | 0.413352 | 1.3:-4036560 | None:intergenic |
| AGCGTCTGAAGAGGCGAATA+TGG | 0.414635 | 1.3:+4038700 | MS.gene67131:CDS |
| GCTTCTGATGAACAATCTAT+AGG | 0.415441 | 1.3:+4036700 | MS.gene67131:CDS |
| GGCTGCCACACTGGAATCTT+CGG | 0.417044 | 1.3:-4037868 | None:intergenic |
| ACAAAGAAATAGTTGCTAGA+AGG | 0.418428 | 1.3:+4039098 | MS.gene67131:CDS |
| TAAATTACTTGCAGCTCAAA+AGG | 0.423003 | 1.3:+4038814 | MS.gene67131:CDS |
| AATCTGTAACCACAGGTTCC+TGG | 0.423293 | 1.3:-4037154 | None:intergenic |
| TTGTCTTCAACTTCCTCCAT+TGG | 0.430502 | 1.3:-4036478 | None:intergenic |
| CGAGCTGAACAAAACTAAAT+CGG | 0.430709 | 1.3:+4038604 | MS.gene67131:CDS |
| GGCAACCTCGAGTTGCGCCT+TGG | 0.433398 | 1.3:-4037889 | None:intergenic |
| TGGAGTCTCAAAGGAGCAAC+TGG | 0.446933 | 1.3:+4038367 | MS.gene67131:CDS |
| CGATGTTGATCATAATCATA+TGG | 0.453913 | 1.3:+4036882 | MS.gene67131:CDS |
| TAAAGCTTCAAGTTCAGAAT+CGG | 0.460892 | 1.3:-4036818 | None:intergenic |
| TAGAGCAAGAATTAAGAAAG+TGG | 0.463769 | 1.3:+4039179 | MS.gene67131:CDS |
| TCAACATTTCTTGAGGAGGT+TGG | 0.463850 | 1.3:-4036502 | None:intergenic |
| CAAAGAAATAGTTGCTAGAA+GGG | 0.465795 | 1.3:+4039099 | MS.gene67131:CDS |
| TTGCGCCTTGGCTGCCACAC+TGG | 0.466144 | 1.3:-4037877 | None:intergenic |
| AAGAAAATTGCTGAAAATAG+AGG | 0.467267 | 1.3:+4037383 | MS.gene67131:CDS |
| GAAGCTGTTTCTAAGTTTGG+AGG | 0.479133 | 1.3:+4037443 | MS.gene67131:CDS |
| CACCGATGTTAACTCTGTAA+TGG | 0.484336 | 1.3:-4037931 | None:intergenic |
| TGCAAGAGCTTCTGAAAGGT+TGG | 0.484392 | 1.3:+4038847 | MS.gene67131:CDS |
| GAGAAGCTTGTGAAGTGCTT+AGG | 0.488597 | 1.3:+4038738 | MS.gene67131:CDS |
| GCATCAATAACTTCGGTTTG+AGG | 0.490058 | 1.3:-4037071 | None:intergenic |
| TGAAGTGCTTAGGAGAGTAA+AGG | 0.495073 | 1.3:+4038748 | MS.gene67131:CDS |
| AATCGGCAGCTATGGCTCCT+AGG | 0.499690 | 1.3:-4036801 | None:intergenic |
| CATTGTACTAGCACCAGCCT+TGG | 0.500187 | 1.3:-4038786 | None:intergenic |
| GAAGCTTCTTTGGCAGCTCA+AGG | 0.501880 | 1.3:-4038673 | None:intergenic |
| GGACTTGAAAAGTAATGTAC+AGG | 0.501997 | 1.3:-4039310 | None:intergenic |
| TGATAATCACATGGATCTAA+CGG | 0.503541 | 1.3:+4037244 | MS.gene67131:CDS |
| AATGAAGTGGATCCATCAAA+TGG | 0.505603 | 1.3:+4038923 | MS.gene67131:CDS |
| AGATCAAGATTCTCTCAATT+GGG | 0.505960 | 1.3:+4038175 | MS.gene67131:CDS |
| AAAGCTCAGAGTGGAAGAAA+TGG | 0.509731 | 1.3:+4037833 | MS.gene67131:CDS |
| AATCATCGCTTGCCTCGATT+AGG | 0.512741 | 1.3:+4038537 | MS.gene67131:CDS |
| GAATGATCACAAAGAACTAA+AGG | 0.515894 | 1.3:+4037295 | MS.gene67131:CDS |
| AACTTCAGCATCTGAGGTTG+AGG | 0.515980 | 1.3:-4037111 | None:intergenic |
| AAGTTCAGAATCGGCAGCTA+TGG | 0.516741 | 1.3:-4036809 | None:intergenic |
| AGTGCTTAGGAGAGTAAAGG+AGG | 0.520512 | 1.3:+4038751 | MS.gene67131:CDS |
| GAAGCAGAAGAACACAGAAT+AGG | 0.520706 | 1.3:+4038137 | MS.gene67131:CDS |
| AGATTCCAGTGTGGCAGCCA+AGG | 0.524007 | 1.3:+4037872 | MS.gene67131:CDS |
| TGAGTTGATGGAAGCTTCGA+TGG | 0.525513 | 1.3:-4036596 | None:intergenic |
| ACATCAGGAATCTTGATTTG+AGG | 0.528054 | 1.3:-4037326 | None:intergenic |
| TGGATAAATCTGAGAAGGCA+AGG | 0.529566 | 1.3:+4039140 | MS.gene67131:CDS |
| TGGAGGAATTGTCGATTGGA+AGG | 0.530992 | 1.3:+4037460 | MS.gene67131:CDS |
| AACTTCATTCAACTTCTCCA+TGG | 0.531531 | 1.3:-4039074 | None:intergenic |
| GCTTCAACTGTTACTGCTAA+CGG | 0.531998 | 1.3:+4036859 | MS.gene67131:CDS |
| CATGGACAACGGAGAAAAGC+CGG | 0.537596 | 1.3:+4039211 | MS.gene67131:CDS |
| ACACTTCCATCAGCAACATC+AGG | 0.542110 | 1.3:-4037341 | None:intergenic |
| GGAATCATTGAAGATTGCTA+TGG | 0.544639 | 1.3:+4039120 | MS.gene67131:CDS |
| ACGAGGAGATTCCGAAGTAC+AGG | 0.544650 | 1.3:+4037667 | MS.gene67131:CDS |
| TTGAGGAGCATCAATAACTT+CGG | 0.545249 | 1.3:-4037078 | None:intergenic |
| TCCTCACCGGATGTGAAAAG+TGG | 0.546596 | 1.3:+4039367 | MS.gene67131:CDS |
| TGTCAAGCTCCTGAAGTACT+TGG | 0.546825 | 1.3:-4037722 | None:intergenic |
| ATGGAAGAGTCATTATCGGT+TGG | 0.547014 | 1.3:-4036577 | None:intergenic |
| AACCAAGAAGGAGACGATGA+TGG | 0.552427 | 1.3:+4038347 | MS.gene67131:CDS |
| CAACTCTTCTGTTACAGAAG+AGG | 0.555295 | 1.3:-4036917 | None:intergenic |
| GTTTGCATGACCATAAGACT+TGG | 0.556311 | 1.3:-4039332 | None:intergenic |
| AAGCACATCCAACTCATTCA+GGG | 0.559299 | 1.3:+4039446 | MS.gene67131:CDS |
| AGTTTGGAGGAATTGTCGAT+TGG | 0.559426 | 1.3:+4037456 | MS.gene67131:CDS |
| GAAGCAGAACAAGCCAAGGC+TGG | 0.560630 | 1.3:+4038773 | MS.gene67131:CDS |
| TGGTTCAACATTTCTTGAGG+AGG | 0.561487 | 1.3:-4036506 | None:intergenic |
| TGTTCAGAATCTGTAACCAC+AGG | 0.562263 | 1.3:-4037161 | None:intergenic |
| TGATATTGTGAACATGCATA+AGG | 0.563041 | 1.3:+4037196 | MS.gene67131:CDS |
| TTCTGAGATCGATATAGCTA+AGG | 0.564068 | 1.3:+4039036 | MS.gene67131:CDS |
| TGAGGTAAATTACTTAAAGG+TGG | 0.567020 | 1.3:+4038478 | MS.gene67131:CDS |
| AACTCGAGGTTGCCAAAGCA+AGG | 0.569107 | 1.3:+4037898 | MS.gene67131:CDS |
| GGAGACTGAATTGAAAACCA+TGG | 0.569236 | 1.3:+4039057 | MS.gene67131:CDS |
| AAGATTCCTGATGTTGCTGA+TGG | 0.570955 | 1.3:+4037335 | MS.gene67131:CDS |
| AAGATTCTCTCAATTGGGAG+AGG | 0.572141 | 1.3:+4038180 | MS.gene67131:CDS |
| GATTAGGCAAAGAGAGGGAA+TGG | 0.573233 | 1.3:+4038553 | MS.gene67131:CDS |
| GCTTCAAGAAGCGTCTGAAG+AGG | 0.573977 | 1.3:+4038691 | MS.gene67131:CDS |
| AACTAAAACTGAGCCTAGAG+AGG | 0.574371 | 1.3:+4037766 | MS.gene67131:CDS |
| AACCAGAACATAAATCATAG+TGG | 0.575238 | 1.3:+4039256 | MS.gene67131:CDS |
| ATCAAATGGTGTGATACTAT+CGG | 0.575258 | 1.3:+4038937 | MS.gene67131:CDS |
| CGAGTTAGATTCGTTGCGTG+TGG | 0.575491 | 1.3:+4037959 | MS.gene67131:CDS |
| ATTTGGTTCAACATTTCTTG+AGG | 0.575747 | 1.3:-4036509 | None:intergenic |
| TACATGAACTTCAGCATCTG+AGG | 0.576726 | 1.3:-4037117 | None:intergenic |
| TGCTATGGATAAATCTGAGA+AGG | 0.581662 | 1.3:+4039135 | MS.gene67131:CDS |
| GGCAGCCAAGGCGCAACTCG+AGG | 0.584945 | 1.3:+4037884 | MS.gene67131:CDS |
| GAATCAAAGTCAAACCAAGA+AGG | 0.585631 | 1.3:+4038335 | MS.gene67131:CDS |
| TTTGCATGACCATAAGACTT+GGG | 0.589944 | 1.3:-4039331 | None:intergenic |
| CAATGAAAATGGATCCTCAC+CGG | 0.594662 | 1.3:+4039354 | MS.gene67131:CDS |
| AGCTTCTCGAGCAAGCAAGT+TGG | 0.594786 | 1.3:-4038723 | None:intergenic |
| AAACCGAAGAGCATCAAGCA+AGG | 0.595409 | 1.3:+4037793 | MS.gene67131:CDS |
| AGTGACTACCCTGAATGAGT+TGG | 0.597230 | 1.3:-4039454 | None:intergenic |
| AGACGATGATGGAGTCTCAA+AGG | 0.598841 | 1.3:+4038358 | MS.gene67131:CDS |
| GGATAAATCTGAGAAGGCAA+GGG | 0.599722 | 1.3:+4039141 | MS.gene67131:CDS |
| TCCCTCTCTTTGCCTAATCG+AGG | 0.600136 | 1.3:-4038549 | None:intergenic |
| AGCTCCATTCGAATCTGTCA+AGG | 0.606757 | 1.3:+4037421 | MS.gene67131:CDS |
| AGATTCTCTCAATTGGGAGA+GGG | 0.608093 | 1.3:+4038181 | MS.gene67131:CDS |
| AGAAAGTGGAGAGCAGAACA+TGG | 0.609255 | 1.3:+4039193 | MS.gene67131:CDS |
| GCCTCGATTAGGCAAAGAGA+GGG | 0.612208 | 1.3:+4038548 | MS.gene67131:CDS |
| GGAGGAAGCAGAACAAGCCA+AGG | 0.613105 | 1.3:+4038769 | MS.gene67131:CDS |
| TATTTGATTTCAGCGAAGCA+AGG | 0.615921 | 1.3:+4037617 | MS.gene67131:intron |
| GCTTTAGAAGATATACAAGA+TGG | 0.618193 | 1.3:+4036835 | MS.gene67131:CDS |
| AGCCAATTCGAGAATTGCAA+CGG | 0.618494 | 1.3:+4039009 | MS.gene67131:CDS |
| ATCGAAGCAAGTGGAAAAGA+CGG | 0.619879 | 1.3:+4038046 | MS.gene67131:CDS |
| TCCGAAGTACAGGAAAAGAT+CGG | 0.623837 | 1.3:+4037677 | MS.gene67131:CDS |
| GCTTCCTTGACAGATTCGAA+TGG | 0.625828 | 1.3:-4037425 | None:intergenic |
| AAATCTGAGAAGGCAAGGGA+AGG | 0.626732 | 1.3:+4039145 | MS.gene67131:CDS |
| AAGCTGCAAGAGCTTCTGAA+AGG | 0.629129 | 1.3:+4038843 | MS.gene67131:CDS |
| CATAGAGAAAGCTACTTCTG+AGG | 0.629665 | 1.3:+4038460 | MS.gene67131:CDS |
| TAGAAGCAACAACAATGAAG+TGG | 0.641955 | 1.3:+4038910 | MS.gene67131:CDS |
| AATGCAAGCAGCAGTTGAGT+CGG | 0.646409 | 1.3:+4038406 | MS.gene67131:CDS |
| ACACAGAATAGGAACAGTCA+TGG | 0.648205 | 1.3:+4038148 | MS.gene67131:CDS |
| TGCCTCGATTAGGCAAAGAG+AGG | 0.654005 | 1.3:+4038547 | MS.gene67131:CDS |
| TGTAACAGAACAAAGTCACC+AGG | 0.655246 | 1.3:+4037136 | MS.gene67131:CDS |
| AGAACTTGCAAAGCTCAGAG+TGG | 0.657807 | 1.3:+4037824 | MS.gene67131:CDS |
| GATAGACGCAACTGTAATCG+AGG | 0.658612 | 1.3:-4038576 | None:intergenic |
| ACAAAGTCACCAGGAACCTG+TGG | 0.660157 | 1.3:+4037145 | MS.gene67131:CDS |
| CGGCAGCTATGGCTCCTAGG+TGG | 0.667123 | 1.3:-4036798 | None:intergenic |
| ACTAAAACTGAGCCTAGAGA+GGG | 0.671828 | 1.3:+4037767 | MS.gene67131:CDS |
| AGAGTGGAAGAAATGGAGCA+AGG | 0.675194 | 1.3:+4037840 | MS.gene67131:CDS |
| GTGAACATGCATAAGGATGG+TGG | 0.677588 | 1.3:+4037203 | MS.gene67131:CDS |
| ATTGTGAACATGCATAAGGA+TGG | 0.682817 | 1.3:+4037200 | MS.gene67131:CDS |
| TGTTGCTGCATCGAAGCAAG+TGG | 0.684932 | 1.3:+4038037 | MS.gene67131:CDS |
| AAGATTGAGATATACCTCGA+CGG | 0.686708 | 1.3:-4037498 | None:intergenic |
| GAAACAGAAGAAAACCACCT+AGG | 0.696012 | 1.3:+4036784 | MS.gene67131:CDS |
| TCATCGAATGATAGCCGTCG+AGG | 0.697705 | 1.3:+4037484 | MS.gene67131:CDS |
| GAAGTACAGGAAAAGATCGG+AGG | 0.699389 | 1.3:+4037680 | MS.gene67131:CDS |
| AGCATTGCAAGAGAGCGAGT+CGG | 0.699995 | 1.3:+4038886 | MS.gene67131:CDS |
| ATGCATATAAACAACCTTTG+GGG | 0.701150 | 1.3:-4036948 | None:intergenic |
| GGAGAGCAGAACATGGACAA+CGG | 0.701482 | 1.3:+4039200 | MS.gene67131:CDS |
| TGCCATTACAGAGTTAACAT+CGG | 0.702576 | 1.3:+4037929 | MS.gene67131:CDS |
| GAGTTGCAGATTGACCCCAA+AGG | 0.717473 | 1.3:+4036934 | MS.gene67131:CDS |
| TATTGCCGAAGATTCCAGTG+TGG | 0.782850 | 1.3:+4037863 | MS.gene67131:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGATTATCAAAAAAACTAT+CGG | - | chr1.3:4037234-4037253 | None:intergenic | 20.0% |
| !!! | TAGTTTTTTTGATAATCACA+TGG | + | chr1.3:4037235-4037254 | MS.gene67131:CDS | 20.0% |
| !!! | TCAAAAAATTTTGTTTGCTA+AGG | + | chr1.3:4038241-4038260 | MS.gene67131:CDS | 20.0% |
| ! | AAGAAAATTGCTGAAAATAG+AGG | + | chr1.3:4037383-4037402 | MS.gene67131:CDS | 25.0% |
| ! | TGAAACAATCGAAATTGAAA+CGG | - | chr1.3:4037593-4037612 | None:intergenic | 25.0% |
| !! | ATTATATCGGTATTTTCTTG+AGG | - | chr1.3:4036550-4036569 | None:intergenic | 25.0% |
| !! | TTATATCGGTATTTTCTTGA+GGG | - | chr1.3:4036549-4036568 | None:intergenic | 25.0% |
| !!! | TTCTGAGGTAAATTACTTAA+AGG | + | chr1.3:4038475-4038494 | MS.gene67131:CDS | 25.0% |
| AACCAGAACATAAATCATAG+TGG | + | chr1.3:4039256-4039275 | MS.gene67131:CDS | 30.0% | |
| ACAAAGAAATAGTTGCTAGA+AGG | + | chr1.3:4039098-4039117 | MS.gene67131:CDS | 30.0% | |
| AGATCAAGATTCTCTCAATT+GGG | + | chr1.3:4038175-4038194 | MS.gene67131:CDS | 30.0% | |
| ATCAAATGGTGTGATACTAT+CGG | + | chr1.3:4038937-4038956 | MS.gene67131:CDS | 30.0% | |
| ATGCATATAAACAACCTTTG+GGG | - | chr1.3:4036951-4036970 | None:intergenic | 30.0% | |
| CAAAGAAATAGTTGCTAGAA+GGG | + | chr1.3:4039099-4039118 | MS.gene67131:CDS | 30.0% | |
| CATGAAGAAGTTAAGTATTC+AGG | - | chr1.3:4037552-4037571 | None:intergenic | 30.0% | |
| CATGCATATAAACAACCTTT+GGG | - | chr1.3:4036952-4036971 | None:intergenic | 30.0% | |
| CGATGTTGATCATAATCATA+TGG | + | chr1.3:4036882-4036901 | MS.gene67131:CDS | 30.0% | |
| GAATGATCACAAAGAACTAA+AGG | + | chr1.3:4037295-4037314 | MS.gene67131:CDS | 30.0% | |
| TAAATTACTTGCAGCTCAAA+AGG | + | chr1.3:4038814-4038833 | MS.gene67131:CDS | 30.0% | |
| TACCACTATGATTTATGTTC+TGG | - | chr1.3:4039261-4039280 | None:intergenic | 30.0% | |
| TAGAGCAAGAATTAAGAAAG+TGG | + | chr1.3:4039179-4039198 | MS.gene67131:CDS | 30.0% | |
| TGAGGTAAATTACTTAAAGG+TGG | + | chr1.3:4038478-4038497 | MS.gene67131:CDS | 30.0% | |
| TGATAATCACATGGATCTAA+CGG | + | chr1.3:4037244-4037263 | MS.gene67131:CDS | 30.0% | |
| TGATATTGTGAACATGCATA+AGG | + | chr1.3:4037196-4037215 | MS.gene67131:CDS | 30.0% | |
| TTTGAGCAAAACACAAAGAA+AGG | - | chr1.3:4037525-4037544 | None:intergenic | 30.0% | |
| ! | ATTTGGTTCAACATTTCTTG+AGG | - | chr1.3:4036512-4036531 | None:intergenic | 30.0% |
| ! | GCAATTTTCTTCTCATTTGT+AGG | - | chr1.3:4037374-4037393 | None:intergenic | 30.0% |
| ! | GTTTGACTTTGATTCCATAT+AGG | - | chr1.3:4038330-4038349 | None:intergenic | 30.0% |
| ! | TAAAGCTTCAAGTTCAGAAT+CGG | - | chr1.3:4036821-4036840 | None:intergenic | 30.0% |
| ! | TATATCGGTATTTTCTTGAG+GGG | - | chr1.3:4036548-4036567 | None:intergenic | 30.0% |
| ! | TCATGAACTGTTTCTTCTTT+CGG | - | chr1.3:4036766-4036785 | None:intergenic | 30.0% |
| ! | TTTATCATCTAGTGAGTTGA+TGG | - | chr1.3:4036611-4036630 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGTTGATGAAAA+AGG | + | chr1.3:4037987-4038006 | MS.gene67131:CDS | 30.0% |
| !! | GCTTTAGAAGATATACAAGA+TGG | + | chr1.3:4036835-4036854 | MS.gene67131:CDS | 30.0% |
| !! | TACTTCTTCAAGTTCCTTTT+TGG | - | chr1.3:4038432-4038451 | None:intergenic | 30.0% |
| !! | TACTTGGACTTTTTCTTGTT+CGG | - | chr1.3:4037709-4037728 | None:intergenic | 30.0% |
| !! | TATTGCTTTTGTTCAGATGA+AGG | + | chr1.3:4038628-4038647 | MS.gene67131:CDS | 30.0% |
| !!! | TGTTCTGGTTTACTACATTT+TGG | - | chr1.3:4039246-4039265 | None:intergenic | 30.0% |
| AACTTCATTCAACTTCTCCA+TGG | - | chr1.3:4039077-4039096 | None:intergenic | 35.0% | |
| AAGATTGAGATATACCTCGA+CGG | - | chr1.3:4037501-4037520 | None:intergenic | 35.0% | |
| AATGAAGTGGATCCATCAAA+TGG | + | chr1.3:4038923-4038942 | MS.gene67131:CDS | 35.0% | |
| ACAGCTTGAAAAATTGTACG+AGG | + | chr1.3:4037650-4037669 | MS.gene67131:CDS | 35.0% | |
| AGAAAAAGTCCAAGTACTTC+AGG | + | chr1.3:4037713-4037732 | MS.gene67131:CDS | 35.0% | |
| AGCTGAGTTAAATGCCTATA+TGG | + | chr1.3:4038313-4038332 | MS.gene67131:CDS | 35.0% | |
| ATTGTGAACATGCATAAGGA+TGG | + | chr1.3:4037200-4037219 | MS.gene67131:CDS | 35.0% | |
| CGAGCTGAACAAAACTAAAT+CGG | + | chr1.3:4038604-4038623 | MS.gene67131:CDS | 35.0% | |
| GAATCAAAGTCAAACCAAGA+AGG | + | chr1.3:4038335-4038354 | MS.gene67131:CDS | 35.0% | |
| GAGATCAAGATTCTCTCAAT+TGG | + | chr1.3:4038174-4038193 | MS.gene67131:CDS | 35.0% | |
| GATAGTATCACACCATTTGA+TGG | - | chr1.3:4038938-4038957 | None:intergenic | 35.0% | |
| GCAAAGAACATAAAAAGTCG+CGG | - | chr1.3:4039418-4039437 | None:intergenic | 35.0% | |
| GCATGCATATAAACAACCTT+TGG | - | chr1.3:4036953-4036972 | None:intergenic | 35.0% | |
| GCTTCTGATGAACAATCTAT+AGG | + | chr1.3:4036700-4036719 | MS.gene67131:CDS | 35.0% | |
| GGAATCATTGAAGATTGCTA+TGG | + | chr1.3:4039120-4039139 | MS.gene67131:CDS | 35.0% | |
| GGACTTGAAAAGTAATGTAC+AGG | - | chr1.3:4039313-4039332 | None:intergenic | 35.0% | |
| GGTCATGCAAACAATGAAAA+TGG | + | chr1.3:4039343-4039362 | MS.gene67131:CDS | 35.0% | |
| GGTTGGAGCTGTTATTATAT+CGG | - | chr1.3:4036563-4036582 | None:intergenic | 35.0% | |
| GTTCAGATGAAGGAAAAAGA+AGG | + | chr1.3:4038638-4038657 | MS.gene67131:CDS | 35.0% | |
| TAGAAGCAACAACAATGAAG+TGG | + | chr1.3:4038910-4038929 | MS.gene67131:CDS | 35.0% | |
| TGCCATTACAGAGTTAACAT+CGG | + | chr1.3:4037929-4037948 | MS.gene67131:CDS | 35.0% | |
| TGCTATGGATAAATCTGAGA+AGG | + | chr1.3:4039135-4039154 | MS.gene67131:CDS | 35.0% | |
| TTCGATGGAAGAGTCATTAT+CGG | - | chr1.3:4036584-4036603 | None:intergenic | 35.0% | |
| TTTGCATGACCATAAGACTT+GGG | - | chr1.3:4039334-4039353 | None:intergenic | 35.0% | |
| ! | ACATCAGGAATCTTGATTTG+AGG | - | chr1.3:4037329-4037348 | None:intergenic | 35.0% |
| ! | AGATTCCAAAGACTCTTTTG+TGG | - | chr1.3:4038099-4038118 | None:intergenic | 35.0% |
| ! | GTTGAGGCTAAATTTTCTTG+AGG | - | chr1.3:4037098-4037117 | None:intergenic | 35.0% |
| ! | TATTTGATTTCAGCGAAGCA+AGG | + | chr1.3:4037617-4037636 | MS.gene67131:intron | 35.0% |
| !! | AAGGAAGCTGTTTCTAAGTT+TGG | + | chr1.3:4037440-4037459 | MS.gene67131:CDS | 35.0% |
| !! | TACATTTTGGCCTATTTCAC+CGG | - | chr1.3:4039233-4039252 | None:intergenic | 35.0% |
| !! | TTCTGAGATCGATATAGCTA+AGG | + | chr1.3:4039036-4039055 | MS.gene67131:CDS | 35.0% |
| !! | TTCTTTCCACTTTTCACATC+CGG | - | chr1.3:4039376-4039395 | None:intergenic | 35.0% |
| !! | TTGAGGAGCATCAATAACTT+CGG | - | chr1.3:4037081-4037100 | None:intergenic | 35.0% |
| !!! | TTTTCAAGTCCCAAGTCTTA+TGG | + | chr1.3:4039322-4039341 | MS.gene67131:CDS | 35.0% |
| AAAGCACATCCAACTCATTC+AGG | + | chr1.3:4039445-4039464 | MS.gene67131:CDS | 40.0% | |
| AAAGCTCAGAGTGGAAGAAA+TGG | + | chr1.3:4037833-4037852 | MS.gene67131:CDS | 40.0% | |
| AACTAAAACTGAGCCTAGAG+AGG | + | chr1.3:4037766-4037785 | MS.gene67131:CDS | 40.0% | |
| AAGATTCCTGATGTTGCTGA+TGG | + | chr1.3:4037335-4037354 | MS.gene67131:CDS | 40.0% | |
| AAGATTCTCTCAATTGGGAG+AGG | + | chr1.3:4038180-4038199 | MS.gene67131:CDS | 40.0% | |
| AAGCACATCCAACTCATTCA+GGG | + | chr1.3:4039446-4039465 | MS.gene67131:CDS | 40.0% | |
| AAGGCAAGGGAAGGAAAATT+AGG | + | chr1.3:4039154-4039173 | MS.gene67131:CDS | 40.0% | |
| ACACAGAATAGGAACAGTCA+TGG | + | chr1.3:4038148-4038167 | MS.gene67131:CDS | 40.0% | |
| ACTAAAACTGAGCCTAGAGA+GGG | + | chr1.3:4037767-4037786 | MS.gene67131:CDS | 40.0% | |
| AGATTCTCTCAATTGGGAGA+GGG | + | chr1.3:4038181-4038200 | MS.gene67131:CDS | 40.0% | |
| AGCCAATTCGAGAATTGCAA+CGG | + | chr1.3:4039009-4039028 | MS.gene67131:CDS | 40.0% | |
| AGTTTGGAGGAATTGTCGAT+TGG | + | chr1.3:4037456-4037475 | MS.gene67131:CDS | 40.0% | |
| ATCGAAGCAAGTGGAAAAGA+CGG | + | chr1.3:4038046-4038065 | MS.gene67131:CDS | 40.0% | |
| ATCTGCACATTCTGCACATA+TGG | + | chr1.3:4038115-4038134 | MS.gene67131:CDS | 40.0% | |
| ATGGAAGAGTCATTATCGGT+TGG | - | chr1.3:4036580-4036599 | None:intergenic | 40.0% | |
| CAACTCTTCTGTTACAGAAG+AGG | - | chr1.3:4036920-4036939 | None:intergenic | 40.0% | |
| CAATGAAAATGGATCCTCAC+CGG | + | chr1.3:4039354-4039373 | MS.gene67131:CDS | 40.0% | |
| CACCGATGTTAACTCTGTAA+TGG | - | chr1.3:4037934-4037953 | None:intergenic | 40.0% | |
| CATAGAGAAAGCTACTTCTG+AGG | + | chr1.3:4038460-4038479 | MS.gene67131:CDS | 40.0% | |
| GAAACAGAAGAAAACCACCT+AGG | + | chr1.3:4036784-4036803 | MS.gene67131:CDS | 40.0% | |
| GAAGCAGAAGAACACAGAAT+AGG | + | chr1.3:4038137-4038156 | MS.gene67131:CDS | 40.0% | |
| GATTGCCACAAAAGAGTCTT+TGG | + | chr1.3:4038091-4038110 | MS.gene67131:CDS | 40.0% | |
| GCTTCAACTGTTACTGCTAA+CGG | + | chr1.3:4036859-4036878 | MS.gene67131:CDS | 40.0% | |
| GGAGACTGAATTGAAAACCA+TGG | + | chr1.3:4039057-4039076 | MS.gene67131:CDS | 40.0% | |
| GGATAAATCTGAGAAGGCAA+GGG | + | chr1.3:4039141-4039160 | MS.gene67131:CDS | 40.0% | |
| GTTTGCATGACCATAAGACT+TGG | - | chr1.3:4039335-4039354 | None:intergenic | 40.0% | |
| TACATGAACTTCAGCATCTG+AGG | - | chr1.3:4037120-4037139 | None:intergenic | 40.0% | |
| TCAACATTTCTTGAGGAGGT+TGG | - | chr1.3:4036505-4036524 | None:intergenic | 40.0% | |
| TCCGAAGTACAGGAAAAGAT+CGG | + | chr1.3:4037677-4037696 | MS.gene67131:CDS | 40.0% | |
| TGGATAAATCTGAGAAGGCA+AGG | + | chr1.3:4039140-4039159 | MS.gene67131:CDS | 40.0% | |
| TGGTTCAACATTTCTTGAGG+AGG | - | chr1.3:4036509-4036528 | None:intergenic | 40.0% | |
| TGTAACAGAACAAAGTCACC+AGG | + | chr1.3:4037136-4037155 | MS.gene67131:CDS | 40.0% | |
| TGTTCAGAATCTGTAACCAC+AGG | - | chr1.3:4037164-4037183 | None:intergenic | 40.0% | |
| ! | GCATCAATAACTTCGGTTTG+AGG | - | chr1.3:4037074-4037093 | None:intergenic | 40.0% |
| ! | TCCGATCTTTTCCTGTACTT+CGG | - | chr1.3:4037681-4037700 | None:intergenic | 40.0% |
| ! | TGAAGTGCTTAGGAGAGTAA+AGG | + | chr1.3:4038748-4038767 | MS.gene67131:CDS | 40.0% |
| !! | GAAGCTGTTTCTAAGTTTGG+AGG | + | chr1.3:4037443-4037462 | MS.gene67131:CDS | 40.0% |
| AAATCTGAGAAGGCAAGGGA+AGG | + | chr1.3:4039145-4039164 | MS.gene67131:CDS | 45.0% | |
| AACCAAGAAGGAGACGATGA+TGG | + | chr1.3:4038347-4038366 | MS.gene67131:CDS | 45.0% | |
| AAGCTGCAAGAGCTTCTGAA+AGG | + | chr1.3:4038843-4038862 | MS.gene67131:CDS | 45.0% | |
| AAGTTCAGAATCGGCAGCTA+TGG | - | chr1.3:4036812-4036831 | None:intergenic | 45.0% | |
| AATCATCGCTTGCCTCGATT+AGG | + | chr1.3:4038537-4038556 | MS.gene67131:CDS | 45.0% | |
| AATCTGTAACCACAGGTTCC+TGG | - | chr1.3:4037157-4037176 | None:intergenic | 45.0% | |
| AATGCAAGCAGCAGTTGAGT+CGG | + | chr1.3:4038406-4038425 | MS.gene67131:CDS | 45.0% | |
| ACACTTCCATCAGCAACATC+AGG | - | chr1.3:4037344-4037363 | None:intergenic | 45.0% | |
| AGAAAGTGGAGAGCAGAACA+TGG | + | chr1.3:4039193-4039212 | MS.gene67131:CDS | 45.0% | |
| AGAACTTGCAAAGCTCAGAG+TGG | + | chr1.3:4037824-4037843 | MS.gene67131:CDS | 45.0% | |
| AGAGTGGAAGAAATGGAGCA+AGG | + | chr1.3:4037840-4037859 | MS.gene67131:CDS | 45.0% | |
| AGCTCCATTCGAATCTGTCA+AGG | + | chr1.3:4037421-4037440 | MS.gene67131:CDS | 45.0% | |
| AGTGCTTAGGAGAGTAAAGG+AGG | + | chr1.3:4038751-4038770 | MS.gene67131:CDS | 45.0% | |
| GAAGTACAGGAAAAGATCGG+AGG | + | chr1.3:4037680-4037699 | MS.gene67131:CDS | 45.0% | |
| GACGCTTCTTGAAGCTTCTT+TGG | - | chr1.3:4038686-4038705 | None:intergenic | 45.0% | |
| GATAGACGCAACTGTAATCG+AGG | - | chr1.3:4038579-4038598 | None:intergenic | 45.0% | |
| GATCTAACGGCTTCATCTTC+TGG | + | chr1.3:4037257-4037276 | MS.gene67131:CDS | 45.0% | |
| GATTAGGCAAAGAGAGGGAA+TGG | + | chr1.3:4038553-4038572 | MS.gene67131:CDS | 45.0% | |
| GCTTCCTTGACAGATTCGAA+TGG | - | chr1.3:4037428-4037447 | None:intergenic | 45.0% | |
| GTGAACATGCATAAGGATGG+TGG | + | chr1.3:4037203-4037222 | MS.gene67131:CDS | 45.0% | |
| TATTGCCGAAGATTCCAGTG+TGG | + | chr1.3:4037863-4037882 | MS.gene67131:CDS | 45.0% | |
| TGCCGTTGCAATTCTCGAAT+TGG | - | chr1.3:4039014-4039033 | None:intergenic | 45.0% | |
| TTGCCTTGCTTGATGCTCTT+CGG | - | chr1.3:4037799-4037818 | None:intergenic | 45.0% | |
| ! | AACTTCAGCATCTGAGGTTG+AGG | - | chr1.3:4037114-4037133 | None:intergenic | 45.0% |
| ! | GAGAAGCTTGTGAAGTGCTT+AGG | + | chr1.3:4038738-4038757 | MS.gene67131:CDS | 45.0% |
| ! | TGCAAGAGCTTCTGAAAGGT+TGG | + | chr1.3:4038847-4038866 | MS.gene67131:CDS | 45.0% |
| ! | TGGAGGAATTGTCGATTGGA+AGG | + | chr1.3:4037460-4037479 | MS.gene67131:CDS | 45.0% |
| ! | TGTCAAGCTCCTGAAGTACT+TGG | - | chr1.3:4037725-4037744 | None:intergenic | 45.0% |
| !! | AAACCGAAGAGCATCAAGCA+AGG | + | chr1.3:4037793-4037812 | MS.gene67131:CDS | 45.0% |
| !! | AGACGATGATGGAGTCTCAA+AGG | + | chr1.3:4038358-4038377 | MS.gene67131:CDS | 45.0% |
| !! | TGAGTTGATGGAAGCTTCGA+TGG | - | chr1.3:4036599-4036618 | None:intergenic | 45.0% |
| AACTCGAGGTTGCCAAAGCA+AGG | + | chr1.3:4037898-4037917 | MS.gene67131:CDS | 50.0% | |
| ACAAAGTCACCAGGAACCTG+TGG | + | chr1.3:4037145-4037164 | MS.gene67131:CDS | 50.0% | |
| ACGAGGAGATTCCGAAGTAC+AGG | + | chr1.3:4037667-4037686 | MS.gene67131:CDS | 50.0% | |
| AGCAGTTGAGTCGGCCAAAA+AGG | + | chr1.3:4038415-4038434 | MS.gene67131:CDS | 50.0% | |
| AGCATTGCAAGAGAGCGAGT+CGG | + | chr1.3:4038886-4038905 | MS.gene67131:CDS | 50.0% | |
| AGCGTCTGAAGAGGCGAATA+TGG | + | chr1.3:4038700-4038719 | MS.gene67131:CDS | 50.0% | |
| AGCTTCTCGAGCAAGCAAGT+TGG | - | chr1.3:4038726-4038745 | None:intergenic | 50.0% | |
| CATGGACAACGGAGAAAAGC+CGG | + | chr1.3:4039211-4039230 | MS.gene67131:CDS | 50.0% | |
| CATTGTACTAGCACCAGCCT+TGG | - | chr1.3:4038789-4038808 | None:intergenic | 50.0% | |
| CGAGTTAGATTCGTTGCGTG+TGG | + | chr1.3:4037959-4037978 | MS.gene67131:CDS | 50.0% | |
| CGATGCAGCAACAGCATCTT+CGG | - | chr1.3:4038030-4038049 | None:intergenic | 50.0% | |
| CGGAGAAAAGCCGGTGAAAT+AGG | + | chr1.3:4039220-4039239 | MS.gene67131:CDS | 50.0% | |
| CTCCATCATCGTCTCCTTCT+TGG | - | chr1.3:4038352-4038371 | None:intergenic | 50.0% | |
| GAAGCTTCTTTGGCAGCTCA+AGG | - | chr1.3:4038676-4038695 | None:intergenic | 50.0% | |
| GAGTTGCAGATTGACCCCAA+AGG | + | chr1.3:4036934-4036953 | MS.gene67131:CDS | 50.0% | |
| GCCTCGATTAGGCAAAGAGA+GGG | + | chr1.3:4038548-4038567 | MS.gene67131:CDS | 50.0% | |
| GGAGAGCAGAACATGGACAA+CGG | + | chr1.3:4039200-4039219 | MS.gene67131:CDS | 50.0% | |
| GGCACTCGTATACCTTGCTT+TGG | - | chr1.3:4037913-4037932 | None:intergenic | 50.0% | |
| TCATCGAATGATAGCCGTCG+AGG | + | chr1.3:4037484-4037503 | MS.gene67131:CDS | 50.0% | |
| TCCCTCTCTTTGCCTAATCG+AGG | - | chr1.3:4038552-4038571 | None:intergenic | 50.0% | |
| TCCTCACCGGATGTGAAAAG+TGG | + | chr1.3:4039367-4039386 | MS.gene67131:CDS | 50.0% | |
| TGCCTCGATTAGGCAAAGAG+AGG | + | chr1.3:4038547-4038566 | MS.gene67131:CDS | 50.0% | |
| TGGAGTCTCAAAGGAGCAAC+TGG | + | chr1.3:4038367-4038386 | MS.gene67131:CDS | 50.0% | |
| TGTTGCTGCATCGAAGCAAG+TGG | + | chr1.3:4038037-4038056 | MS.gene67131:CDS | 50.0% | |
| ! | GGGGCATCTGCTAGTGAATT+TGG | - | chr1.3:4036529-4036548 | None:intergenic | 50.0% |
| !! | GCTTCAAGAAGCGTCTGAAG+AGG | + | chr1.3:4038691-4038710 | MS.gene67131:CDS | 50.0% |
| !! | TCCACTTTTCACATCCGGTG+AGG | - | chr1.3:4039371-4039390 | None:intergenic | 50.0% |
| AATCGGCAGCTATGGCTCCT+AGG | - | chr1.3:4036804-4036823 | None:intergenic | 55.0% | |
| AGATTCCAGTGTGGCAGCCA+AGG | + | chr1.3:4037872-4037891 | MS.gene67131:CDS | 55.0% | |
| GAAGCAGAACAAGCCAAGGC+TGG | + | chr1.3:4038773-4038792 | MS.gene67131:CDS | 55.0% | |
| GGAGGAAGCAGAACAAGCCA+AGG | + | chr1.3:4038769-4038788 | MS.gene67131:CDS | 55.0% | |
| GGCTGCCACACTGGAATCTT+CGG | - | chr1.3:4037871-4037890 | None:intergenic | 55.0% | |
| ! | CTTCGGTTTGTGCCCTCTCT+AGG | - | chr1.3:4037782-4037801 | None:intergenic | 55.0% |
| CGGCAGCTATGGCTCCTAGG+TGG | - | chr1.3:4036801-4036820 | None:intergenic | 65.0% | |
| TTGCGCCTTGGCTGCCACAC+TGG | - | chr1.3:4037880-4037899 | None:intergenic | 65.0% | |
| ! | GGCAACCTCGAGTTGCGCCT+TGG | - | chr1.3:4037892-4037911 | None:intergenic | 65.0% |
| GGCAGCCAAGGCGCAACTCG+AGG | + | chr1.3:4037884-4037903 | MS.gene67131:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 4036481 | 4039471 | 4036481 | ID=MS.gene67131 |
| chr1.3 | mRNA | 4036481 | 4039471 | 4036481 | ID=MS.gene67131.t1;Parent=MS.gene67131 |
| chr1.3 | exon | 4036481 | 4036955 | 4036481 | ID=MS.gene67131.t1.exon1;Parent=MS.gene67131.t1 |
| chr1.3 | CDS | 4036481 | 4036955 | 4036481 | ID=cds.MS.gene67131.t1;Parent=MS.gene67131.t1 |
| chr1.3 | exon | 4037066 | 4037505 | 4037066 | ID=MS.gene67131.t1.exon2;Parent=MS.gene67131.t1 |
| chr1.3 | CDS | 4037066 | 4037505 | 4037066 | ID=cds.MS.gene67131.t1;Parent=MS.gene67131.t1 |
| chr1.3 | exon | 4037630 | 4039471 | 4037630 | ID=MS.gene67131.t1.exon3;Parent=MS.gene67131.t1 |
| chr1.3 | CDS | 4037630 | 4039471 | 4037630 | ID=cds.MS.gene67131.t1;Parent=MS.gene67131.t1 |
| Gene Sequence |
| Protein sequence |
