Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71300.t1 | XP_024635775.1 | 95.9 | 704 | 29 | 0 | 1 | 704 | 5 | 708 | 0.00E+00 | 1326.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71300.t1 | B9DGY1 | 76.0 | 688 | 144 | 7 | 23 | 704 | 23 | 695 | 1.8e-298 | 1026.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71300.t1 | G7J8V4 | 95.9 | 704 | 29 | 0 | 1 | 704 | 5 | 708 | 0.0e+00 | 1326.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049633 | MS.gene71300 | 0.836141 | 1.11E-56 | -1.69E-46 |
MS.gene049757 | MS.gene71300 | 0.805476 | 1.31E-49 | -1.69E-46 |
MS.gene050170 | MS.gene71300 | 0.879549 | 1.14E-69 | -1.69E-46 |
MS.gene050323 | MS.gene71300 | 0.843565 | 1.30E-58 | -1.69E-46 |
MS.gene050338 | MS.gene71300 | -0.807194 | 5.69E-50 | -1.69E-46 |
MS.gene050496 | MS.gene71300 | 0.842062 | 3.25E-58 | -1.69E-46 |
MS.gene050553 | MS.gene71300 | 0.834609 | 2.71E-56 | -1.69E-46 |
MS.gene050697 | MS.gene71300 | 0.871401 | 7.03E-67 | -1.69E-46 |
MS.gene05080 | MS.gene71300 | 0.814293 | 1.66E-51 | -1.69E-46 |
MS.gene050868 | MS.gene71300 | 0.819946 | 8.89E-53 | -1.69E-46 |
MS.gene050871 | MS.gene71300 | 0.820337 | 7.23E-53 | -1.69E-46 |
MS.gene050904 | MS.gene71300 | 0.841079 | 5.90E-58 | -1.69E-46 |
MS.gene051268 | MS.gene71300 | 0.807177 | 5.74E-50 | -1.69E-46 |
MS.gene051317 | MS.gene71300 | 0.80938 | 1.95E-50 | -1.69E-46 |
MS.gene051838 | MS.gene71300 | 0.831575 | 1.54E-55 | -1.69E-46 |
MS.gene051941 | MS.gene71300 | 0.845636 | 3.59E-59 | -1.69E-46 |
MS.gene052100 | MS.gene71300 | 0.836623 | 8.40E-57 | -1.69E-46 |
MS.gene052469 | MS.gene71300 | 0.807961 | 3.91E-50 | -1.69E-46 |
MS.gene052966 | MS.gene71300 | 0.803749 | 3.00E-49 | -1.69E-46 |
MS.gene053479 | MS.gene71300 | 0.819953 | 8.86E-53 | -1.69E-46 |
MS.gene053480 | MS.gene71300 | 0.813434 | 2.57E-51 | -1.69E-46 |
MS.gene053824 | MS.gene71300 | 0.829106 | 6.20E-55 | -1.69E-46 |
MS.gene054107 | MS.gene71300 | 0.803521 | 3.35E-49 | -1.69E-46 |
MS.gene054344 | MS.gene71300 | 0.824314 | 8.63E-54 | -1.69E-46 |
MS.gene05494 | MS.gene71300 | 0.833601 | 4.86E-56 | -1.69E-46 |
MS.gene055741 | MS.gene71300 | 0.853458 | 2.36E-61 | -1.69E-46 |
MS.gene055744 | MS.gene71300 | 0.846188 | 2.54E-59 | -1.69E-46 |
MS.gene055748 | MS.gene71300 | 0.810729 | 9.97E-51 | -1.69E-46 |
MS.gene055750 | MS.gene71300 | 0.814268 | 1.68E-51 | -1.69E-46 |
MS.gene055751 | MS.gene71300 | 0.815226 | 1.03E-51 | -1.69E-46 |
MS.gene05589 | MS.gene71300 | 0.872708 | 2.58E-67 | -1.69E-46 |
MS.gene056266 | MS.gene71300 | 0.805954 | 1.04E-49 | -1.69E-46 |
MS.gene056283 | MS.gene71300 | 0.817443 | 3.29E-52 | -1.69E-46 |
MS.gene056387 | MS.gene71300 | 0.896696 | 2.88E-76 | -1.69E-46 |
MS.gene056504 | MS.gene71300 | 0.833356 | 5.59E-56 | -1.69E-46 |
MS.gene056508 | MS.gene71300 | 0.818187 | 2.23E-52 | -1.69E-46 |
MS.gene056618 | MS.gene71300 | -0.827175 | 1.81E-54 | -1.69E-46 |
MS.gene057019 | MS.gene71300 | 0.819567 | 1.09E-52 | -1.69E-46 |
MS.gene057076 | MS.gene71300 | 0.820859 | 5.49E-53 | -1.69E-46 |
MS.gene05787 | MS.gene71300 | 0.800184 | 1.62E-48 | -1.69E-46 |
MS.gene058120 | MS.gene71300 | 0.806176 | 9.34E-50 | -1.69E-46 |
MS.gene05837 | MS.gene71300 | 0.806233 | 9.08E-50 | -1.69E-46 |
MS.gene058448 | MS.gene71300 | 0.851214 | 1.03E-60 | -1.69E-46 |
MS.gene059023 | MS.gene71300 | 0.80656 | 7.75E-50 | -1.69E-46 |
MS.gene059667 | MS.gene71300 | 0.807078 | 6.03E-50 | -1.69E-46 |
MS.gene059717 | MS.gene71300 | 0.824724 | 6.91E-54 | -1.69E-46 |
MS.gene06000 | MS.gene71300 | 0.857297 | 1.80E-62 | -1.69E-46 |
MS.gene06027 | MS.gene71300 | 0.810874 | 9.28E-51 | -1.69E-46 |
MS.gene060372 | MS.gene71300 | 0.804995 | 1.65E-49 | -1.69E-46 |
MS.gene060778 | MS.gene71300 | 0.842896 | 1.95E-58 | -1.69E-46 |
MS.gene06097 | MS.gene71300 | 0.809387 | 1.94E-50 | -1.69E-46 |
MS.gene060982 | MS.gene71300 | 0.834476 | 2.93E-56 | -1.69E-46 |
MS.gene061044 | MS.gene71300 | -0.82296 | 1.79E-53 | -1.69E-46 |
MS.gene061218 | MS.gene71300 | 0.829762 | 4.29E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71300.t1 | MTR_3g082750 | 97.443 | 704 | 18 | 0 | 1 | 704 | 5 | 708 | 0.0 | 1413 |
MS.gene71300.t1 | MTR_3g094740 | 46.281 | 605 | 284 | 9 | 134 | 704 | 143 | 740 | 0.0 | 538 |
MS.gene71300.t1 | MTR_8g091710 | 46.382 | 608 | 285 | 9 | 131 | 704 | 131 | 731 | 0.0 | 537 |
MS.gene71300.t1 | MTR_3g094740 | 48.142 | 565 | 252 | 9 | 134 | 664 | 143 | 700 | 1.26e-179 | 530 |
MS.gene71300.t1 | MTR_3g105760 | 37.366 | 372 | 216 | 4 | 212 | 571 | 136 | 502 | 1.81e-73 | 251 |
MS.gene71300.t1 | MTR_4g026450 | 35.128 | 390 | 240 | 5 | 193 | 576 | 148 | 530 | 1.44e-69 | 241 |
MS.gene71300.t1 | MTR_6g038750 | 35.904 | 376 | 228 | 4 | 197 | 571 | 129 | 492 | 1.16e-67 | 236 |
MS.gene71300.t1 | MTR_0053s0030 | 30.196 | 510 | 333 | 8 | 69 | 576 | 30 | 518 | 1.24e-66 | 233 |
MS.gene71300.t1 | MTR_1g046620 | 33.638 | 437 | 264 | 8 | 146 | 576 | 142 | 558 | 6.95e-64 | 227 |
MS.gene71300.t1 | MTR_1g009860 | 34.109 | 387 | 241 | 5 | 197 | 576 | 131 | 510 | 3.79e-59 | 211 |
MS.gene71300.t1 | MTR_1g009860 | 34.109 | 387 | 241 | 5 | 197 | 576 | 131 | 510 | 8.60e-59 | 210 |
MS.gene71300.t1 | MTR_1g095480 | 30.649 | 385 | 251 | 4 | 200 | 571 | 203 | 584 | 7.49e-51 | 187 |
MS.gene71300.t1 | MTR_1g095480 | 29.481 | 424 | 283 | 4 | 200 | 610 | 203 | 623 | 1.47e-50 | 189 |
MS.gene71300.t1 | MTR_1g008980 | 26.897 | 435 | 283 | 9 | 164 | 576 | 13 | 434 | 2.81e-43 | 168 |
MS.gene71300.t1 | MTR_4g104070 | 27.214 | 463 | 268 | 13 | 150 | 576 | 26 | 455 | 4.25e-39 | 151 |
MS.gene71300.t1 | MTR_8g464860 | 31.003 | 329 | 191 | 8 | 194 | 493 | 203 | 524 | 2.79e-38 | 151 |
MS.gene71300.t1 | MTR_5g077080 | 30.072 | 276 | 178 | 5 | 211 | 479 | 98 | 365 | 1.35e-37 | 148 |
MS.gene71300.t1 | MTR_3g070410 | 27.073 | 410 | 261 | 8 | 181 | 559 | 69 | 471 | 7.92e-37 | 147 |
MS.gene71300.t1 | MTR_4g091510 | 29.909 | 331 | 200 | 8 | 199 | 502 | 212 | 537 | 1.05e-34 | 140 |
MS.gene71300.t1 | MTR_4g091510 | 29.909 | 331 | 200 | 8 | 199 | 502 | 217 | 542 | 1.45e-34 | 140 |
MS.gene71300.t1 | MTR_5g068050 | 25.126 | 398 | 263 | 6 | 199 | 566 | 127 | 519 | 1.35e-32 | 133 |
MS.gene71300.t1 | MTR_2g011640 | 29.206 | 315 | 194 | 7 | 199 | 489 | 265 | 574 | 8.44e-32 | 132 |
MS.gene71300.t1 | MTR_1g085610 | 28.947 | 304 | 192 | 8 | 195 | 488 | 225 | 514 | 4.55e-22 | 101 |
MS.gene71300.t1 | MTR_0224s0030 | 24.510 | 204 | 154 | 0 | 407 | 610 | 36 | 239 | 1.14e-17 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71300.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1074 |
MS.gene71300.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1074 |
MS.gene71300.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1074 |
MS.gene71300.t1 | AT3G07700 | 71.583 | 739 | 156 | 10 | 1 | 704 | 5 | 724 | 0.0 | 1058 |
MS.gene71300.t1 | AT5G64940 | 45.470 | 607 | 288 | 8 | 134 | 704 | 158 | 757 | 2.71e-178 | 527 |
MS.gene71300.t1 | AT5G64940 | 45.470 | 607 | 288 | 8 | 134 | 704 | 158 | 757 | 2.71e-178 | 527 |
MS.gene71300.t1 | AT5G24970 | 35.088 | 399 | 231 | 4 | 194 | 571 | 134 | 525 | 7.02e-73 | 250 |
MS.gene71300.t1 | AT5G24970 | 35.000 | 400 | 232 | 4 | 194 | 572 | 173 | 565 | 1.93e-72 | 250 |
MS.gene71300.t1 | AT1G79600 | 34.815 | 405 | 251 | 5 | 182 | 576 | 124 | 525 | 7.51e-70 | 242 |
MS.gene71300.t1 | AT1G71810 | 36.170 | 376 | 227 | 4 | 197 | 571 | 120 | 483 | 2.93e-69 | 240 |
MS.gene71300.t1 | AT5G24970 | 34.336 | 399 | 231 | 5 | 194 | 571 | 134 | 522 | 9.91e-69 | 239 |
MS.gene71300.t1 | AT3G24190 | 34.430 | 395 | 244 | 6 | 185 | 576 | 184 | 566 | 2.17e-61 | 220 |
MS.gene71300.t1 | AT4G31390 | 33.333 | 387 | 244 | 5 | 197 | 576 | 167 | 546 | 5.76e-57 | 206 |
MS.gene71300.t1 | AT2G39190 | 30.380 | 395 | 252 | 4 | 200 | 576 | 202 | 591 | 8.17e-51 | 190 |
MS.gene71300.t1 | AT4G31390 | 32.768 | 354 | 224 | 5 | 230 | 576 | 1 | 347 | 2.17e-48 | 177 |
MS.gene71300.t1 | AT4G31390 | 31.266 | 387 | 227 | 6 | 197 | 576 | 167 | 521 | 4.28e-47 | 177 |
MS.gene71300.t1 | AT4G24810 | 27.766 | 461 | 302 | 10 | 142 | 585 | 15 | 461 | 2.73e-42 | 160 |
MS.gene71300.t1 | AT5G50330 | 28.761 | 452 | 286 | 10 | 148 | 576 | 14 | 452 | 7.08e-42 | 159 |
MS.gene71300.t1 | AT5G24810 | 27.706 | 462 | 280 | 11 | 164 | 584 | 60 | 508 | 5.06e-41 | 162 |
MS.gene71300.t1 | AT4G24810 | 29.008 | 393 | 259 | 7 | 207 | 585 | 32 | 418 | 6.34e-41 | 155 |
MS.gene71300.t1 | AT4G24810 | 29.008 | 393 | 259 | 7 | 207 | 585 | 32 | 418 | 6.34e-41 | 155 |
MS.gene71300.t1 | AT1G65950 | 30.657 | 274 | 177 | 6 | 211 | 478 | 113 | 379 | 3.95e-39 | 151 |
MS.gene71300.t1 | AT4G24810 | 28.750 | 400 | 258 | 8 | 207 | 585 | 32 | 425 | 4.80e-39 | 150 |
MS.gene71300.t1 | AT1G65950 | 30.657 | 274 | 177 | 6 | 211 | 478 | 113 | 379 | 3.03e-38 | 150 |
MS.gene71300.t1 | AT4G24810 | 31.724 | 290 | 179 | 6 | 207 | 482 | 32 | 316 | 1.56e-37 | 143 |
MS.gene71300.t1 | AT5G24810 | 26.369 | 493 | 278 | 13 | 164 | 584 | 60 | 539 | 3.64e-37 | 150 |
MS.gene71300.t1 | AT4G24810 | 33.209 | 268 | 160 | 6 | 207 | 460 | 32 | 294 | 1.37e-36 | 140 |
MS.gene71300.t1 | AT5G05200 | 24.879 | 414 | 276 | 6 | 182 | 566 | 113 | 520 | 5.62e-34 | 137 |
MS.gene71300.t1 | AT5G50330 | 26.829 | 451 | 280 | 10 | 148 | 576 | 14 | 436 | 5.79e-34 | 136 |
MS.gene71300.t1 | AT2G40090 | 28.617 | 311 | 200 | 5 | 195 | 487 | 87 | 393 | 1.90e-32 | 132 |
MS.gene71300.t1 | AT1G11390 | 28.125 | 352 | 216 | 9 | 183 | 504 | 198 | 542 | 6.48e-32 | 132 |
MS.gene71300.t1 | AT1G61640 | 28.267 | 329 | 202 | 10 | 200 | 502 | 213 | 533 | 1.23e-28 | 122 |
MS.gene71300.t1 | AT1G61640 | 28.267 | 329 | 202 | 10 | 200 | 502 | 213 | 533 | 1.23e-28 | 122 |
MS.gene71300.t1 | AT2G39190 | 36.250 | 160 | 99 | 1 | 200 | 359 | 202 | 358 | 1.59e-22 | 100 |
MS.gene71300.t1 | AT4G01660 | 27.778 | 306 | 211 | 5 | 194 | 497 | 222 | 519 | 3.18e-22 | 102 |
MS.gene71300.t1 | AT1G61640 | 30.049 | 203 | 124 | 6 | 200 | 390 | 213 | 409 | 7.56e-18 | 87.4 |
Find 150 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCCTTGTAGCTGGTTTAT+TGG | 0.177430 | 3.2:-71713656 | MS.gene71300:intron |
CTCTTTAAACAATTCATTAA+TGG | 0.177743 | 3.2:+71715178 | None:intergenic |
CATTTATATAATCAATTTCT+TGG | 0.199717 | 3.2:+71713923 | None:intergenic |
TACAGGAACTTCTAGATATA+AGG | 0.236116 | 3.2:-71711410 | MS.gene71300:intron |
GGAGGAACCTTTCTAAATAT+TGG | 0.238190 | 3.2:-71710837 | MS.gene71300:CDS |
GGCTTTATTGAGAGTGAATT+AGG | 0.254061 | 3.2:-71715206 | MS.gene71300:CDS |
ACCCTTGTAGCTGGTTTATT+GGG | 0.269755 | 3.2:-71713655 | MS.gene71300:intron |
GGCTCAAAGCAAGCTGTTAA+TGG | 0.283062 | 3.2:-71715943 | MS.gene71300:CDS |
ATTCAATGCCTTATTGATCT+TGG | 0.300157 | 3.2:-71712673 | MS.gene71300:CDS |
TATTGAGGCGTACTTGATTC+AGG | 0.305517 | 3.2:-71713375 | MS.gene71300:intron |
GAAATGCCGCCATCAAAATT+AGG | 0.325630 | 3.2:-71716054 | MS.gene71300:CDS |
TCTTTAAACAATTCATTAAT+GGG | 0.331071 | 3.2:+71715179 | None:intergenic |
GCTACTATGTACACGGTATT+AGG | 0.336158 | 3.2:-71710858 | MS.gene71300:CDS |
AGCTGTTAATGGAGCAAGTT+TGG | 0.341642 | 3.2:-71715932 | MS.gene71300:CDS |
CAATGCAAAATGGGCATATC+CGG | 0.342054 | 3.2:-71715713 | MS.gene71300:CDS |
GAGCAGACATTGTCTGCAAT+TGG | 0.346799 | 3.2:-71712459 | MS.gene71300:CDS |
TTCGTTGTCTTTGTCAATGC+TGG | 0.352992 | 3.2:+71715892 | None:intergenic |
CCAATGAAAATTACAGTTCC+TGG | 0.383016 | 3.2:-71715795 | MS.gene71300:CDS |
TTCAAGTGGTGGAAGTTCAT+TGG | 0.384033 | 3.2:+71715858 | None:intergenic |
TAATGGTAGAGCTGTTAAAA+TGG | 0.385147 | 3.2:-71716028 | MS.gene71300:CDS |
TCAATTATTTATTACGACTT+TGG | 0.385780 | 3.2:-71713181 | MS.gene71300:CDS |
CCATCAAAATTAGGTAATAA+TGG | 0.389209 | 3.2:-71716045 | MS.gene71300:CDS |
TTTGGCATCCTTCTCATAAA+CGG | 0.395475 | 3.2:+71713102 | None:intergenic |
ACAGATCCCCGGTGGGTTGG+AGG | 0.397963 | 3.2:+71712647 | None:intergenic |
AGCAGACATTGTCTGCAATT+GGG | 0.399926 | 3.2:-71712458 | MS.gene71300:CDS |
TCTATTTCCCCGTGAATTTG+TGG | 0.401899 | 3.2:-71715402 | MS.gene71300:CDS |
ATCTTCACAAATGAGAAATC+TGG | 0.404363 | 3.2:+71711531 | None:intergenic |
TTTCAGAGAAGTGAAACTTT+TGG | 0.408412 | 3.2:-71714179 | MS.gene71300:CDS |
TTGGTGGTCCAACTAGAGAT+TGG | 0.412828 | 3.2:-71714160 | MS.gene71300:CDS |
ATAACAAAGGTGAAGGTTGA+TGG | 0.416877 | 3.2:+71712300 | None:intergenic |
CGAAGATCACTAGACAATCT+TGG | 0.421184 | 3.2:-71716186 | MS.gene71300:CDS |
CCGAGACTTGCAGCAGCAAT+TGG | 0.421258 | 3.2:+71715143 | None:intergenic |
ACATCAATAGCAAGATTTCC+AGG | 0.425680 | 3.2:+71713211 | None:intergenic |
GGAAGTTCATTGGAGATTGT+AGG | 0.432975 | 3.2:+71715868 | None:intergenic |
GACAATGTCTGCTCTTGATC+TGG | 0.434915 | 3.2:+71712468 | None:intergenic |
ATTGACACCAATATTTAGAA+AGG | 0.438522 | 3.2:+71710830 | None:intergenic |
TAGCACAAGACCAGCCATTC+CGG | 0.440262 | 3.2:-71712326 | MS.gene71300:CDS |
TTTCACGCTGATCCACATCC+TGG | 0.442896 | 3.2:-71713229 | MS.gene71300:CDS |
GAAGGAGGAAAACGGCTTCA+TGG | 0.444251 | 3.2:-71715496 | MS.gene71300:CDS |
TGTCCAAGTTTAATAAAAGT+TGG | 0.444282 | 3.2:+71715446 | None:intergenic |
TCTATTCTTTGAACTCTCAA+TGG | 0.445983 | 3.2:+71711160 | None:intergenic |
GAAATTGATTATATAAATGA+AGG | 0.452977 | 3.2:-71713919 | MS.gene71300:CDS |
TTATGAGAAGGATGCCAAAA+AGG | 0.452978 | 3.2:-71713098 | MS.gene71300:intron |
TTGCAAAAGCTTGATTGCCT+TGG | 0.457062 | 3.2:+71710799 | None:intergenic |
AGGTGAAGGTTGATGGAAAC+CGG | 0.458214 | 3.2:+71712307 | None:intergenic |
GGAGGGCTCCAAGATCAATA+AGG | 0.466597 | 3.2:+71712665 | None:intergenic |
TATTACGACTTTGGCATGAT+GGG | 0.468315 | 3.2:-71713172 | MS.gene71300:CDS |
CCAATTGCTGCTGCAAGTCT+CGG | 0.469478 | 3.2:-71715143 | MS.gene71300:CDS |
GGATGAACTCGCAAAATTGC+AGG | 0.471584 | 3.2:-71715381 | MS.gene71300:intron |
TGCTGCTGCAAGTCTCGGTC+AGG | 0.471750 | 3.2:-71715138 | MS.gene71300:CDS |
CCACAGGGCCACAACTCGTC+GGG | 0.471887 | 3.2:-71711377 | MS.gene71300:CDS |
GTGTTACAGATATTGAAAAC+AGG | 0.473505 | 3.2:-71713256 | MS.gene71300:intron |
CCTCAGATGAAGGCTTCAGT+TGG | 0.474873 | 3.2:-71715819 | MS.gene71300:CDS |
TTGGGATTATACAGCAATGA+AGG | 0.474937 | 3.2:-71713637 | MS.gene71300:CDS |
CGAGTTCATCCACAAATTCA+CGG | 0.480904 | 3.2:+71715393 | None:intergenic |
TCTGCTCTTGATCTGGTGAC+TGG | 0.488384 | 3.2:+71712475 | None:intergenic |
CAGATCCCCGGTGGGTTGGA+GGG | 0.491136 | 3.2:+71712648 | None:intergenic |
ATTCTTACGGTCTATGCAAA+GGG | 0.493150 | 3.2:-71710633 | MS.gene71300:CDS |
TTTGCAAATGGATCGTTTGT+TGG | 0.494522 | 3.2:-71710783 | MS.gene71300:CDS |
TTTGTGAAGCAAGTTGAGGC+AGG | 0.494683 | 3.2:-71711133 | MS.gene71300:CDS |
GTTATCAAAGTTCAAAGGCC+TGG | 0.495296 | 3.2:-71715080 | MS.gene71300:CDS |
GGAAAACGGCTTCATGGCTA+AGG | 0.498904 | 3.2:-71715490 | MS.gene71300:CDS |
GCTTTCTGTGGGGAGAAAGC+AGG | 0.501806 | 3.2:+71715233 | None:intergenic |
GATAAGCAGAAGGAGGAAAA+CGG | 0.502499 | 3.2:-71715504 | MS.gene71300:CDS |
TAAAGCCTCTTGCTTTCTGT+GGG | 0.502807 | 3.2:+71715222 | None:intergenic |
GCTATCTGCCCGACGAGTTG+TGG | 0.508655 | 3.2:+71711369 | None:intergenic |
TTGATGGAAACCGGAATGGC+TGG | 0.509916 | 3.2:+71712316 | None:intergenic |
ATGAAGGGAAGAATGCTGAT+AGG | 0.512805 | 3.2:-71713903 | MS.gene71300:CDS |
CTGACAGATCCCCGGTGGGT+TGG | 0.513021 | 3.2:+71712644 | None:intergenic |
TGGTAAATTTCGTAGATTTG+TGG | 0.513813 | 3.2:-71716094 | MS.gene71300:CDS |
CTTGGAGCCCTCCAACCCAC+CGG | 0.514456 | 3.2:-71712655 | MS.gene71300:CDS |
ACAGTCTGAACCTGTGCATA+GGG | 0.514489 | 3.2:+71711501 | None:intergenic |
AATCTCATCACGTGCTATTG+AGG | 0.516579 | 3.2:-71713390 | MS.gene71300:CDS |
TTGGAGCCCTCCAACCCACC+GGG | 0.517854 | 3.2:-71712654 | MS.gene71300:CDS |
AATGGATCGTTTGTTGGTGC+AGG | 0.519200 | 3.2:-71710777 | MS.gene71300:intron |
CCGACGAGTTGTGGCCCTGT+GGG | 0.519502 | 3.2:+71711378 | None:intergenic |
ATAGCAAGATTTCCAGGATG+TGG | 0.519629 | 3.2:+71713217 | None:intergenic |
GGCAGAGATCAATTGATGTA+TGG | 0.520886 | 3.2:-71715774 | MS.gene71300:CDS |
ATTGAGAGTTCAAAGAATAG+AGG | 0.523885 | 3.2:-71711158 | MS.gene71300:CDS |
CTCAGATGAAGGCTTCAGTT+GGG | 0.526088 | 3.2:-71715818 | MS.gene71300:CDS |
ATACCGATCCAATCTCTAGT+TGG | 0.528498 | 3.2:+71714152 | None:intergenic |
TTATTGTAACAATATAGAAT+CGG | 0.529878 | 3.2:-71716217 | MS.gene71300:CDS |
GAGTTCATCCACAAATTCAC+GGG | 0.530269 | 3.2:+71715394 | None:intergenic |
TTATTACGACTTTGGCATGA+TGG | 0.530731 | 3.2:-71713173 | MS.gene71300:CDS |
TAAATTTCGTAGATTTGTGG+TGG | 0.532222 | 3.2:-71716091 | MS.gene71300:CDS |
TTGACCTTGGAGTATGTACC+AGG | 0.532309 | 3.2:-71713612 | MS.gene71300:intron |
GTCTCCACTTTATTCTCCGA+CGG | 0.532763 | 3.2:+71715973 | None:intergenic |
GCAGACATTGTCTGCAATTG+GGG | 0.533585 | 3.2:-71712457 | MS.gene71300:CDS |
GTCTTTGTCAATGCTGGAGT+AGG | 0.534650 | 3.2:+71715898 | None:intergenic |
ATAAAGCCTCTTGCTTTCTG+TGG | 0.536314 | 3.2:+71715221 | None:intergenic |
AACTCTCAATGGCATTGACA+TGG | 0.538554 | 3.2:+71711171 | None:intergenic |
GGTGTCAATTTGACTAGCCA+AGG | 0.544223 | 3.2:-71710816 | MS.gene71300:CDS |
TTCTCCCCACAGAAAGCAAG+AGG | 0.547830 | 3.2:-71715227 | MS.gene71300:CDS |
TGCTCTGATAACAAAGGTGA+AGG | 0.550545 | 3.2:+71712293 | None:intergenic |
AGCAATGAAGGTGTTGACCT+TGG | 0.557273 | 3.2:-71713625 | MS.gene71300:CDS |
CCAACTGAAGCCTTCATCTG+AGG | 0.557528 | 3.2:+71715819 | None:intergenic |
ATAAATTGTCAAAGAATGAA+AGG | 0.558325 | 3.2:-71716140 | MS.gene71300:CDS |
CAACTGAAGCCTTCATCTGA+GGG | 0.559152 | 3.2:+71715820 | None:intergenic |
AATGCAAAATGGGCATATCC+GGG | 0.559374 | 3.2:-71715712 | MS.gene71300:CDS |
TATTCTTACGGTCTATGCAA+AGG | 0.560981 | 3.2:-71710634 | MS.gene71300:CDS |
GAAAGCGACAGTGTTACAAA+TGG | 0.563568 | 3.2:-71710880 | MS.gene71300:CDS |
AATAAAGTGGAGACAGTCAA+TGG | 0.564916 | 3.2:-71715964 | MS.gene71300:CDS |
GACAGTCTGAACCTGTGCAT+AGG | 0.566917 | 3.2:+71711500 | None:intergenic |
CAGTTCGAGCAATCTCTCAC+GGG | 0.571404 | 3.2:+71713132 | None:intergenic |
ATTACGACTTTGGCATGATG+GGG | 0.574785 | 3.2:-71713171 | MS.gene71300:CDS |
TAGAGCTGTTAAAATGGTAC+CGG | 0.578175 | 3.2:-71716022 | MS.gene71300:CDS |
TACATCAATTGATCTCTGCC+AGG | 0.581512 | 3.2:+71715777 | None:intergenic |
AGGTATTAAAATAAATCAAG+TGG | 0.581716 | 3.2:-71713447 | MS.gene71300:CDS |
TGGCTTCACAGAAGAAAAGC+AGG | 0.586577 | 3.2:-71715689 | MS.gene71300:intron |
ATAAGGCAACGACAGCCCAC+AGG | 0.588619 | 3.2:-71711393 | MS.gene71300:CDS |
GACACCGTCGGAGAATAAAG+TGG | 0.590443 | 3.2:-71715977 | MS.gene71300:CDS |
ACAGTTCGAGCAATCTCTCA+CGG | 0.590615 | 3.2:+71713131 | None:intergenic |
CCCACAGGGCCACAACTCGT+CGG | 0.591725 | 3.2:-71711378 | MS.gene71300:CDS |
GATTGCTGCACCCTATGCAC+AGG | 0.591848 | 3.2:-71711511 | MS.gene71300:intron |
TCTAGTCTGAAAGAGCTGCT+CGG | 0.594593 | 3.2:-71710902 | MS.gene71300:intron |
GTGGATACATTGACTTCTCG+TGG | 0.595263 | 3.2:-71713428 | MS.gene71300:CDS |
ACTATGTACACGGTATTAGG+AGG | 0.601581 | 3.2:-71710855 | MS.gene71300:CDS |
CCCGACGAGTTGTGGCCCTG+TGG | 0.603360 | 3.2:+71711377 | None:intergenic |
TGTTTAAAGAGTTTGAAGAT+CGG | 0.606621 | 3.2:-71715166 | MS.gene71300:CDS |
AAGTAGTTATCAAAGTTCAA+AGG | 0.613460 | 3.2:-71715085 | MS.gene71300:CDS |
AGGGAATCTGTATTACAGCT+CGG | 0.617183 | 3.2:-71715470 | MS.gene71300:CDS |
CCTTACAGCTGACAGATCCC+CGG | 0.625234 | 3.2:+71712636 | None:intergenic |
TACAGCTGACAGATCCCCGG+TGG | 0.626173 | 3.2:+71712639 | None:intergenic |
AAATTGATTATATAAATGAA+GGG | 0.628702 | 3.2:-71713918 | MS.gene71300:CDS |
CTACCTCTAGTACTCGAACT+CGG | 0.632492 | 3.2:+71711098 | None:intergenic |
GAAAGAAACATACAGGTACT+CGG | 0.633321 | 3.2:+71713848 | None:intergenic |
ACATCTGATAAGTTAAAGAG+TGG | 0.637198 | 3.2:-71716114 | MS.gene71300:CDS |
TTACGACTTTGGCATGATGG+GGG | 0.641403 | 3.2:-71713170 | MS.gene71300:CDS |
ATAACCTGGTACATACTCCA+AGG | 0.642881 | 3.2:+71713608 | None:intergenic |
ACTCCGAGTTCGAGTACTAG+AGG | 0.643048 | 3.2:-71711101 | MS.gene71300:intron |
GACATTGTCTGCAATTGGGG+AGG | 0.644164 | 3.2:-71712454 | MS.gene71300:intron |
TTGCATTGTCGAAAAGAACA+CGG | 0.647652 | 3.2:+71715728 | None:intergenic |
AGAAAATGCTCTGATAACAA+AGG | 0.648630 | 3.2:+71712287 | None:intergenic |
ACAAATGGCTACTATGTACA+CGG | 0.650955 | 3.2:-71710865 | MS.gene71300:CDS |
GAAAACGGCTTCATGGCTAA+GGG | 0.653245 | 3.2:-71715489 | MS.gene71300:CDS |
GGAGTTTGTGAAGCAAGTTG+AGG | 0.666870 | 3.2:-71711137 | MS.gene71300:CDS |
GCAGTAATAATGGCTTTGCA+TGG | 0.669620 | 3.2:-71716243 | None:intergenic |
AAGGTTGATGGAAACCGGAA+TGG | 0.675520 | 3.2:+71712312 | None:intergenic |
AGAAAACTTAAAGCTGATCG+CGG | 0.679693 | 3.2:-71714207 | MS.gene71300:CDS |
GACACGTAAAGAAAGAACAA+AGG | 0.679744 | 3.2:+71715750 | None:intergenic |
TAAGGCAACGACAGCCCACA+GGG | 0.682134 | 3.2:-71711392 | MS.gene71300:CDS |
GGTCCAACTAGAGATTGGAT+CGG | 0.683709 | 3.2:-71714155 | MS.gene71300:CDS |
ACAGCTGACAGATCCCCGGT+GGG | 0.686035 | 3.2:+71712640 | None:intergenic |
CATCGTGCAATTCTGCACAA+TGG | 0.686650 | 3.2:-71715113 | MS.gene71300:CDS |
AAAGCCTCTTGCTTTCTGTG+GGG | 0.714944 | 3.2:+71715223 | None:intergenic |
TGGAGCCCTCCAACCCACCG+GGG | 0.715980 | 3.2:-71712653 | MS.gene71300:CDS |
GCAAAATGGGCATATCCGGG+TGG | 0.723451 | 3.2:-71715709 | MS.gene71300:CDS |
TTGGACAGTTATCATCAACA+AGG | 0.723832 | 3.2:-71715430 | MS.gene71300:CDS |
TTATGTTTCGAAAATCACGA+CGG | 0.732189 | 3.2:+71713878 | None:intergenic |
AGTTCATCCACAAATTCACG+GGG | 0.744511 | 3.2:+71715395 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAATACAAATATTTAAA+AGG | + | chr3.2:71713023-71713042 | None:intergenic | 10.0% |
!! | AAATTGATTATATAAATGAA+GGG | - | chr3.2:71712914-71712933 | MS.gene71300:intron | 10.0% |
!! | AATTCAAAAATAATTCAATT+AGG | + | chr3.2:71712202-71712221 | None:intergenic | 10.0% |
!!! | TTTCTTTTAATAAATCAATT+AGG | - | chr3.2:71711251-71711270 | MS.gene71300:intron | 10.0% |
!! | AAAGAAACAAATAAGAAAAT+AGG | + | chr3.2:71714793-71714812 | None:intergenic | 15.0% |
!! | AAATTTATAAGATAGAGATA+TGG | + | chr3.2:71714279-71714298 | None:intergenic | 15.0% |
!! | AAGAAACAAATAAGAAAATA+GGG | + | chr3.2:71714792-71714811 | None:intergenic | 15.0% |
!! | CATTTATATAATCAATTTCT+TGG | + | chr3.2:71712912-71712931 | None:intergenic | 15.0% |
!! | CTAATTATCTATTCTAATAA+AGG | - | chr3.2:71713993-71714012 | MS.gene71300:intron | 15.0% |
!! | CTTTATTAGAATAGATAATT+AGG | + | chr3.2:71713995-71714014 | None:intergenic | 15.0% |
!! | GAAATTGATTATATAAATGA+AGG | - | chr3.2:71712913-71712932 | MS.gene71300:intron | 15.0% |
!! | TCTTTAAACAATTCATTAAT+GGG | + | chr3.2:71711656-71711675 | None:intergenic | 15.0% |
!! | TGAACATGATAAAAAATATT+TGG | + | chr3.2:71716108-71716127 | None:intergenic | 15.0% |
!! | TTATTGTAACAATATAGAAT+CGG | - | chr3.2:71710615-71710634 | MS.gene71300:CDS | 15.0% |
!! | TTTATTTAGTGTATTAAACT+TGG | - | chr3.2:71711522-71711541 | MS.gene71300:CDS | 15.0% |
!!! | AATTTCATAATTTGATTTTC+AGG | - | chr3.2:71714294-71714313 | MS.gene71300:intron | 15.0% |
!!! | ACTTGAATATTTAATTCTTT+TGG | - | chr3.2:71714402-71714421 | MS.gene71300:intron | 15.0% |
!!! | ATATATGATTAATTTTGTTG+AGG | + | chr3.2:71711922-71711941 | None:intergenic | 15.0% |
!!! | CTTTAATTTTAAAGAAAACA+AGG | + | chr3.2:71713270-71713289 | None:intergenic | 15.0% |
!!! | TTATTATTGATGGAATTTTT+TGG | - | chr3.2:71714467-71714486 | MS.gene71300:intron | 15.0% |
!!! | TTCAACTTATTTTTTCTTAT+TGG | - | chr3.2:71715888-71715907 | MS.gene71300:CDS | 15.0% |
!! | AATTCAATTAGGAATCTTAT+TGG | + | chr3.2:71712191-71712210 | None:intergenic | 20.0% |
!! | AGAAACAAATAAGAAAATAG+GGG | + | chr3.2:71714791-71714810 | None:intergenic | 20.0% |
!! | AGGTATTAAAATAAATCAAG+TGG | - | chr3.2:71713385-71713404 | MS.gene71300:CDS | 20.0% |
!! | ATAAATTGTCAAAGAATGAA+AGG | - | chr3.2:71710692-71710711 | MS.gene71300:intron | 20.0% |
!! | CTCTTTAAACAATTCATTAA+TGG | + | chr3.2:71711657-71711676 | None:intergenic | 20.0% |
!! | TATGCGGTTAATATTAAAAT+TGG | + | chr3.2:71713145-71713164 | None:intergenic | 20.0% |
!! | TCAATTATTTATTACGACTT+TGG | - | chr3.2:71713651-71713670 | MS.gene71300:intron | 20.0% |
!! | TGAGAAAAAACTATTAAAGT+AGG | - | chr3.2:71715019-71715038 | MS.gene71300:intron | 20.0% |
!!! | ACAACTAAGTTTTATATACA+TGG | - | chr3.2:71712453-71712472 | MS.gene71300:intron | 20.0% |
!!! | AGAAAAAATAAGTTGAAGAA+TGG | + | chr3.2:71715885-71715904 | None:intergenic | 20.0% |
!!! | AGTTTTAATCTTTTACAAGA+TGG | - | chr3.2:71714228-71714247 | MS.gene71300:intron | 20.0% |
!!! | CTTATTTGATTTTTTTTTCC+CGG | - | chr3.2:71713358-71713377 | MS.gene71300:intron | 20.0% |
!!! | GTGAAGCATTATTTTAATTA+TGG | - | chr3.2:71715579-71715598 | MS.gene71300:intron | 20.0% |
!!! | TATGGCAATTTTATTATTGA+TGG | - | chr3.2:71714457-71714476 | MS.gene71300:intron | 20.0% |
!!! | TCATGATATCTTCATATTTT+AGG | - | chr3.2:71714986-71715005 | MS.gene71300:intron | 20.0% |
!!! | TTAGTTGTATATTTTGTGTT+AGG | + | chr3.2:71712441-71712460 | None:intergenic | 20.0% |
!!! | TTATTTGATTTTTTTTTCCC+GGG | - | chr3.2:71713359-71713378 | MS.gene71300:intron | 20.0% |
!!! | TTTTGTTCATACTATTCTTA+CGG | - | chr3.2:71716186-71716205 | MS.gene71300:CDS | 20.0% |
! | AAAGTTTGAGTAAATGTGAA+AGG | + | chr3.2:71714118-71714137 | None:intergenic | 25.0% |
! | AAATTACACCACAAAATGAT+AGG | - | chr3.2:71712036-71712055 | MS.gene71300:intron | 25.0% |
! | AACTCATTTACACAATAACA+CGG | - | chr3.2:71715190-71715209 | MS.gene71300:CDS | 25.0% |
! | AAGTAGTTATCAAAGTTCAA+AGG | - | chr3.2:71711747-71711766 | MS.gene71300:intron | 25.0% |
! | ACAAACTTTAACATGTAATG+AGG | + | chr3.2:71712766-71712785 | None:intergenic | 25.0% |
! | ACTATGATATCATCCAAAAA+GGG | - | chr3.2:71712539-71712558 | MS.gene71300:intron | 25.0% |
! | ATATCCCAAATTATTTACCT+TGG | - | chr3.2:71715055-71715074 | MS.gene71300:CDS | 25.0% |
! | ATTACAAAACAAACATCATC+TGG | + | chr3.2:71715546-71715565 | None:intergenic | 25.0% |
! | ATTGACACCAATATTTAGAA+AGG | + | chr3.2:71716005-71716024 | None:intergenic | 25.0% |
! | CAAACTTTAACATGTAATGA+GGG | + | chr3.2:71712765-71712784 | None:intergenic | 25.0% |
! | CATAAATTCTGCAGATAATT+CGG | + | chr3.2:71714441-71714460 | None:intergenic | 25.0% |
! | CATAATCATGTCTCATATAT+TGG | - | chr3.2:71713076-71713095 | MS.gene71300:intron | 25.0% |
! | CCATCAAAATTAGGTAATAA+TGG | - | chr3.2:71710787-71710806 | MS.gene71300:CDS | 25.0% |
! | CCATTAAACCTATATTTCAT+GGG | + | chr3.2:71714926-71714945 | None:intergenic | 25.0% |
! | CTTCAAGGAAATAAAGTTAT+TGG | + | chr3.2:71713293-71713312 | None:intergenic | 25.0% |
! | GTTGAATATATTCATCTGAT+CGG | - | chr3.2:71713522-71713541 | MS.gene71300:intron | 25.0% |
! | TAAATCAATTAGGTTTCTGT+TGG | - | chr3.2:71711261-71711280 | MS.gene71300:intron | 25.0% |
! | TACTATGATATCATCCAAAA+AGG | - | chr3.2:71712538-71712557 | MS.gene71300:intron | 25.0% |
! | TAGAGATTGGAAATTTACAA+AGG | + | chr3.2:71713119-71713138 | None:intergenic | 25.0% |
! | TATATGAGACATGATTATGA+AGG | + | chr3.2:71713075-71713094 | None:intergenic | 25.0% |
! | TATTAGATACACTTTCAGAT+AGG | + | chr3.2:71713496-71713515 | None:intergenic | 25.0% |
! | TCCATTAAACCTATATTTCA+TGG | + | chr3.2:71714927-71714946 | None:intergenic | 25.0% |
! | TGAGTTAAAGTGTATCTAAA+TGG | + | chr3.2:71715176-71715195 | None:intergenic | 25.0% |
! | TGTCCAAGTTTAATAAAAGT+TGG | + | chr3.2:71711389-71711408 | None:intergenic | 25.0% |
! | TGTTTAAAGAGTTTGAAGAT+CGG | - | chr3.2:71711666-71711685 | MS.gene71300:intron | 25.0% |
! | TTAAAATTGGAGTTAGAGAT+TGG | + | chr3.2:71713132-71713151 | None:intergenic | 25.0% |
! | TTACTTTAAATGAGGTACAA+AGG | + | chr3.2:71714622-71714641 | None:intergenic | 25.0% |
! | TTCTCAATATAACATTCTTC+AGG | - | chr3.2:71711568-71711587 | MS.gene71300:intron | 25.0% |
! | TTGTCTAATATTACGAAACT+TGG | - | chr3.2:71711954-71711973 | MS.gene71300:intron | 25.0% |
! | TTTAGTGTATTAAACTTGGT+TGG | - | chr3.2:71711526-71711545 | MS.gene71300:CDS | 25.0% |
! | TTTGTATAAATAAGGCCATT+TGG | + | chr3.2:71712240-71712259 | None:intergenic | 25.0% |
!! | AAATAAGAAAATAGGGGTAT+TGG | + | chr3.2:71714785-71714804 | None:intergenic | 25.0% |
!! | ACATATACGATATACCATTT+TGG | + | chr3.2:71714675-71714694 | None:intergenic | 25.0% |
!! | ACATTAAATTACGTCTTGTT+TGG | - | chr3.2:71715818-71715837 | MS.gene71300:CDS | 25.0% |
!! | AGAACTTTTCAATTTCCTTT+TGG | + | chr3.2:71714757-71714776 | None:intergenic | 25.0% |
!! | CCATTATTACCTAATTTTGA+TGG | + | chr3.2:71710790-71710809 | None:intergenic | 25.0% |
!! | TATATTTTGTGTTAGGTATC+CGG | + | chr3.2:71712434-71712453 | None:intergenic | 25.0% |
!! | TGATTTTCGAAACATAAAGT+GGG | - | chr3.2:71712960-71712979 | MS.gene71300:intron | 25.0% |
!!! | AATAAGAAAATAGGGGTATT+GGG | + | chr3.2:71714784-71714803 | None:intergenic | 25.0% |
!!! | ATTAGGAATCTTATTGGTTT+TGG | + | chr3.2:71712185-71712204 | None:intergenic | 25.0% |
!!! | CCTTTTGTTTCTCTTTAATT+CGG | + | chr3.2:71712065-71712084 | None:intergenic | 25.0% |
!!! | CTTTTGTTTCTCTTTAATTC+GGG | + | chr3.2:71712064-71712083 | None:intergenic | 25.0% |
!!! | GACAGATTTTTGCTATAATT+CGG | + | chr3.2:71713973-71713992 | None:intergenic | 25.0% |
!!! | GCCTTATTTATACAAACTAA+GGG | - | chr3.2:71712244-71712263 | MS.gene71300:intron | 25.0% |
!!! | TAATTTGTATTGATTAGGAG+CGG | + | chr3.2:71712286-71712305 | None:intergenic | 25.0% |
!!! | TGCAGTAATTTGTATTGATT+AGG | + | chr3.2:71712291-71712310 | None:intergenic | 25.0% |
!!! | TTAGGAATCTTATTGGTTTT+GGG | + | chr3.2:71712184-71712203 | None:intergenic | 25.0% |
!!! | TTATTACCTAATTTTGATGG+CGG | + | chr3.2:71710787-71710806 | None:intergenic | 25.0% |
!!! | TTGATTGTTGATAAGCTTTT+AGG | - | chr3.2:71713840-71713859 | MS.gene71300:intron | 25.0% |
!!! | TTTATTTTAATACCTGTTCC+CGG | + | chr3.2:71713380-71713399 | None:intergenic | 25.0% |
AAAGCTTAAATGAAAGTTCC+AGG | + | chr3.2:71715518-71715537 | None:intergenic | 30.0% | |
AAATCAGTATAAGGCATGAT+TGG | - | chr3.2:71714952-71714971 | MS.gene71300:intron | 30.0% | |
ACATCTGATAAGTTAAAGAG+TGG | - | chr3.2:71710718-71710737 | MS.gene71300:intron | 30.0% | |
ACCTTAGCTTACTTTAAATG+AGG | + | chr3.2:71714630-71714649 | None:intergenic | 30.0% | |
ACTAGAATTAACAAGTCTCA+CGG | - | chr3.2:71715614-71715633 | MS.gene71300:intron | 30.0% | |
ACTCATTTACACAATAACAC+GGG | - | chr3.2:71715191-71715210 | MS.gene71300:CDS | 30.0% | |
AGAAAATGCTCTGATAACAA+AGG | + | chr3.2:71714548-71714567 | None:intergenic | 30.0% | |
ATAAGAGCAATTATGAATCC+AGG | + | chr3.2:71713343-71713362 | None:intergenic | 30.0% | |
ATATAACATTCTTCAGGACA+AGG | - | chr3.2:71711574-71711593 | MS.gene71300:intron | 30.0% | |
ATCTTCACAAATGAGAAATC+TGG | + | chr3.2:71715304-71715323 | None:intergenic | 30.0% | |
ATTGAGAGTTCAAAGAATAG+AGG | - | chr3.2:71715674-71715693 | MS.gene71300:intron | 30.0% | |
CCCATGAAATATAGGTTTAA+TGG | - | chr3.2:71714923-71714942 | MS.gene71300:intron | 30.0% | |
CCGAATTAAAGAGAAACAAA+AGG | - | chr3.2:71712062-71712081 | MS.gene71300:intron | 30.0% | |
CGAATTATCTGCAGAATTTA+TGG | - | chr3.2:71714439-71714458 | MS.gene71300:intron | 30.0% | |
CGTTAGTATCATGTTTAAGA+TGG | - | chr3.2:71711865-71711884 | MS.gene71300:intron | 30.0% | |
GACACCAAGGTAAATAATTT+GGG | + | chr3.2:71715062-71715081 | None:intergenic | 30.0% | |
GTGTTACAGATATTGAAAAC+AGG | - | chr3.2:71713576-71713595 | MS.gene71300:intron | 30.0% | |
TAAACCTATATTTCATGGGA+TGG | + | chr3.2:71714922-71714941 | None:intergenic | 30.0% | |
TAAATTTCGTAGATTTGTGG+TGG | - | chr3.2:71710741-71710760 | MS.gene71300:intron | 30.0% | |
TAATGGTAGAGCTGTTAAAA+TGG | - | chr3.2:71710804-71710823 | MS.gene71300:CDS | 30.0% | |
TACAGGAACTTCTAGATATA+AGG | - | chr3.2:71715422-71715441 | MS.gene71300:CDS | 30.0% | |
TATCTGGTCTAGTTATTGTA+AGG | - | chr3.2:71712515-71712534 | MS.gene71300:CDS | 30.0% | |
TATTGCAGAAAGAAACATAC+AGG | + | chr3.2:71712994-71713013 | None:intergenic | 30.0% | |
TATTGGCAATGAAACATGAT+TGG | - | chr3.2:71714850-71714869 | MS.gene71300:intron | 30.0% | |
TCAGAGTAAATCAAGTTTCA+AGG | + | chr3.2:71713052-71713071 | None:intergenic | 30.0% | |
TCTATTCTTTGAACTCTCAA+TGG | + | chr3.2:71715675-71715694 | None:intergenic | 30.0% | |
TGACACCAAGGTAAATAATT+TGG | + | chr3.2:71715063-71715082 | None:intergenic | 30.0% | |
TGGTAAATTTCGTAGATTTG+TGG | - | chr3.2:71710738-71710757 | MS.gene71300:intron | 30.0% | |
TTATGTTTCGAAAATCACGA+CGG | + | chr3.2:71712957-71712976 | None:intergenic | 30.0% | |
TTGATAGAAACAACACTTCA+AGG | + | chr3.2:71713308-71713327 | None:intergenic | 30.0% | |
! | AAAGTTTGTGCAACTCTTTT+TGG | - | chr3.2:71712777-71712796 | MS.gene71300:intron | 30.0% |
! | AAGTTTGTGCAACTCTTTTT+GGG | - | chr3.2:71712778-71712797 | MS.gene71300:intron | 30.0% |
! | AATCATGCCTTATACTGATT+TGG | + | chr3.2:71714953-71714972 | None:intergenic | 30.0% |
! | ACCTCATTTAAAGTAAGCTA+AGG | - | chr3.2:71714626-71714645 | MS.gene71300:intron | 30.0% |
! | ATTCAATGCCTTATTGATCT+TGG | - | chr3.2:71714159-71714178 | MS.gene71300:CDS | 30.0% |
! | GAGATCTGTACAATTTTTCT+TGG | - | chr3.2:71714321-71714340 | MS.gene71300:intron | 30.0% |
! | GGTCCAACTTTTATTAAACT+TGG | - | chr3.2:71711383-71711402 | MS.gene71300:CDS | 30.0% |
! | GTGATTTTCGAAACATAAAG+TGG | - | chr3.2:71712959-71712978 | MS.gene71300:intron | 30.0% |
! | TATATCATGCATGCTTTTAC+AGG | - | chr3.2:71715405-71715424 | MS.gene71300:CDS | 30.0% |
! | TCATGTTTAAGATGGATCTA+AGG | - | chr3.2:71711873-71711892 | MS.gene71300:intron | 30.0% |
! | TCTTTTCGACAATGCAAAAT+GGG | - | chr3.2:71711110-71711129 | MS.gene71300:CDS | 30.0% |
! | TGAAAGAAACTAGACCTTTT+TGG | + | chr3.2:71713751-71713770 | None:intergenic | 30.0% |
! | TGACTTTTTATTCTTCTGAC+AGG | - | chr3.2:71715259-71715278 | MS.gene71300:intron | 30.0% |
! | TTCTTTTCGACAATGCAAAA+TGG | - | chr3.2:71711109-71711128 | MS.gene71300:CDS | 30.0% |
! | TTGCATTTTAGATAAGCAGA+AGG | - | chr3.2:71711318-71711337 | MS.gene71300:intron | 30.0% |
! | TTTCAGAGAAGTGAAACTTT+TGG | - | chr3.2:71712653-71712672 | MS.gene71300:CDS | 30.0% |
! | TTTGAATTTTCCTACTGTTG+TGG | - | chr3.2:71712214-71712233 | MS.gene71300:intron | 30.0% |
!! | ATAGCATTTTAACCGAGAAT+GGG | + | chr3.2:71715375-71715394 | None:intergenic | 30.0% |
!! | ATGCAGTATTTGTGTTGATT+AGG | + | chr3.2:71712331-71712350 | None:intergenic | 30.0% |
!! | GCCCTTAGTTTGTATAAATA+AGG | + | chr3.2:71712248-71712267 | None:intergenic | 30.0% |
!! | GGCCTTATTTATACAAACTA+AGG | - | chr3.2:71712243-71712262 | MS.gene71300:intron | 30.0% |
!! | GTCAATATTTTCAAGCTCAT+TGG | - | chr3.2:71711492-71711511 | MS.gene71300:intron | 30.0% |
!! | GTTTTATTCCGTTTATGAGA+AGG | - | chr3.2:71713722-71713741 | MS.gene71300:intron | 30.0% |
!!! | AAAACTTTTAGCTCTTCAAG+TGG | + | chr3.2:71710991-71711010 | None:intergenic | 30.0% |
!!! | CATAATTTGATTTTCAGGTG+AGG | - | chr3.2:71714299-71714318 | MS.gene71300:intron | 30.0% |
!!! | TATTGATGGAATTTTTTGGC+AGG | - | chr3.2:71714471-71714490 | MS.gene71300:intron | 30.0% |
!!! | TTATTTTAATACCTGTTCCC+GGG | + | chr3.2:71713379-71713398 | None:intergenic | 30.0% |
AACATCACAAGATGTGCAAA+TGG | + | chr3.2:71711832-71711851 | None:intergenic | 35.0% | |
AATAAAGTGGAGACAGTCAA+TGG | - | chr3.2:71710868-71710887 | MS.gene71300:CDS | 35.0% | |
AATAACTACATGTCTAGCGT+AGG | + | chr3.2:71715087-71715106 | None:intergenic | 35.0% | |
AATTATGAATCCAGGTTCAG+TGG | + | chr3.2:71713335-71713354 | None:intergenic | 35.0% | |
ACAAATGGCTACTATGTACA+CGG | - | chr3.2:71715967-71715986 | MS.gene71300:CDS | 35.0% | |
ACATCAATAGCAAGATTTCC+AGG | + | chr3.2:71713624-71713643 | None:intergenic | 35.0% | |
AGAAAACTTAAAGCTGATCG+CGG | - | chr3.2:71712625-71712644 | MS.gene71300:intron | 35.0% | |
ATAACAAAGGTGAAGGTTGA+TGG | + | chr3.2:71714535-71714554 | None:intergenic | 35.0% | |
ATAACTACATGTCTAGCGTA+GGG | + | chr3.2:71715086-71715105 | None:intergenic | 35.0% | |
ATTCTTACGGTCTATGCAAA+GGG | - | chr3.2:71716199-71716218 | MS.gene71300:CDS | 35.0% | |
CACTATTCAAGATGATAACC+TGG | + | chr3.2:71713241-71713260 | None:intergenic | 35.0% | |
CATTACAAGAAGACACAAAC+AGG | + | chr3.2:71713885-71713904 | None:intergenic | 35.0% | |
CCAATGAAAATTACAGTTCC+TGG | - | chr3.2:71711037-71711056 | MS.gene71300:intron | 35.0% | |
CTGATTGTGAAAGACATATC+TGG | - | chr3.2:71712499-71712518 | MS.gene71300:CDS | 35.0% | |
CTTTAACATGTAATGAGGGA+AGG | + | chr3.2:71712761-71712780 | None:intergenic | 35.0% | |
GAAAGAAACATACAGGTACT+CGG | + | chr3.2:71712987-71713006 | None:intergenic | 35.0% | |
GACACGTAAAGAAAGAACAA+AGG | + | chr3.2:71711085-71711104 | None:intergenic | 35.0% | |
GCATGTGAAGATGAAAGAAT+TGG | + | chr3.2:71715761-71715780 | None:intergenic | 35.0% | |
GGAGGAACCTTTCTAAATAT+TGG | - | chr3.2:71715995-71716014 | MS.gene71300:CDS | 35.0% | |
GGTATATCGTATATGTGAAG+AGG | - | chr3.2:71714679-71714698 | MS.gene71300:intron | 35.0% | |
GTATCAGCTAATTCATATGC+AGG | - | chr3.2:71716161-71716180 | MS.gene71300:CDS | 35.0% | |
TACACTTTCAGATAGGAACA+AGG | + | chr3.2:71713489-71713508 | None:intergenic | 35.0% | |
TAGAGCTGTTAAAATGGTAC+CGG | - | chr3.2:71710810-71710829 | MS.gene71300:CDS | 35.0% | |
TATGTCTTTCACAATCAGTG+TGG | + | chr3.2:71712497-71712516 | None:intergenic | 35.0% | |
TATTACGACTTTGGCATGAT+GGG | - | chr3.2:71713660-71713679 | MS.gene71300:intron | 35.0% | |
TATTCTTACGGTCTATGCAA+AGG | - | chr3.2:71716198-71716217 | MS.gene71300:CDS | 35.0% | |
TCAAAAAGCTTCTTCAAACC+AGG | + | chr3.2:71711773-71711792 | None:intergenic | 35.0% | |
TCAGTTATTGTTCCCATTCT+CGG | - | chr3.2:71715360-71715379 | MS.gene71300:intron | 35.0% | |
TCATGAGGAAAGTAGTGTAT+TGG | - | chr3.2:71714833-71714852 | MS.gene71300:intron | 35.0% | |
TCTTTCATCTTCACATGCTA+TGG | - | chr3.2:71715763-71715782 | MS.gene71300:CDS | 35.0% | |
TCTTTGTAAACCTTTCTGCA+CGG | - | chr3.2:71714808-71714827 | MS.gene71300:intron | 35.0% | |
TGGAACACCAAATCAGTATA+AGG | - | chr3.2:71714943-71714962 | MS.gene71300:intron | 35.0% | |
TTATGAGAAGGATGCCAAAA+AGG | - | chr3.2:71713734-71713753 | MS.gene71300:intron | 35.0% | |
TTATTACGACTTTGGCATGA+TGG | - | chr3.2:71713659-71713678 | MS.gene71300:intron | 35.0% | |
TTCATGCACATTAGAAGAGA+AGG | + | chr3.2:71714588-71714607 | None:intergenic | 35.0% | |
TTGCATTGTCGAAAAGAACA+CGG | + | chr3.2:71711107-71711126 | None:intergenic | 35.0% | |
TTGGACAGTTATCATCAACA+AGG | - | chr3.2:71711402-71711421 | MS.gene71300:CDS | 35.0% | |
TTGGGATTATACAGCAATGA+AGG | - | chr3.2:71713195-71713214 | MS.gene71300:CDS | 35.0% | |
TTTATTCTTCTGACAGGCAT+AGG | - | chr3.2:71715265-71715284 | MS.gene71300:intron | 35.0% | |
TTTGCAAATGGATCGTTTGT+TGG | - | chr3.2:71716049-71716068 | MS.gene71300:CDS | 35.0% | |
TTTGGCATCCTTCTCATAAA+CGG | + | chr3.2:71713733-71713752 | None:intergenic | 35.0% | |
! | CATTTTAGATAAGCAGAAGG+AGG | - | chr3.2:71711321-71711340 | MS.gene71300:intron | 35.0% |
! | CCAGGAACTGTAATTTTCAT+TGG | + | chr3.2:71711040-71711059 | None:intergenic | 35.0% |
! | GCTTTATTCTTGTGACTGAT+TGG | - | chr3.2:71716139-71716158 | MS.gene71300:CDS | 35.0% |
! | TTTTCTGAACTCTAACTAGC+TGG | - | chr3.2:71711182-71711201 | MS.gene71300:CDS | 35.0% |
!! | AGAGCATTTTCTACACTTGA+AGG | - | chr3.2:71714556-71714575 | MS.gene71300:intron | 35.0% |
!! | CATAGCATTTTAACCGAGAA+TGG | + | chr3.2:71715376-71715395 | None:intergenic | 35.0% |
!! | GATATACCATTTTGGTATGC+CGG | + | chr3.2:71714667-71714686 | None:intergenic | 35.0% |
!! | GGCTTTATTGAGAGTGAATT+AGG | - | chr3.2:71711626-71711645 | MS.gene71300:intron | 35.0% |
!! | GTGCAAAGTATTTTGAACGA+TGG | + | chr3.2:71712835-71712854 | None:intergenic | 35.0% |
AAGTCTCACGGAACATTTGT+AGG | - | chr3.2:71715626-71715645 | MS.gene71300:intron | 40.0% | |
AATGCAAAATGGGCATATCC+GGG | - | chr3.2:71711120-71711139 | MS.gene71300:CDS | 40.0% | |
ACTATGTACACGGTATTAGG+AGG | - | chr3.2:71715977-71715996 | MS.gene71300:CDS | 40.0% | |
AGAGAAATGTCTCTTCTCTG+AGG | + | chr3.2:71712156-71712175 | None:intergenic | 40.0% | |
AGCAAAAAGAAAGACACCGT+CGG | - | chr3.2:71710843-71710862 | MS.gene71300:CDS | 40.0% | |
AGCAGACATTGTCTGCAATT+GGG | - | chr3.2:71714374-71714393 | MS.gene71300:intron | 40.0% | |
AGCTGTTAATGGAGCAAGTT+TGG | - | chr3.2:71710900-71710919 | MS.gene71300:CDS | 40.0% | |
AGGGAATCTGTATTACAGCT+CGG | - | chr3.2:71711362-71711381 | MS.gene71300:CDS | 40.0% | |
AGTTCATCCACAAATTCACG+GGG | + | chr3.2:71711440-71711459 | None:intergenic | 40.0% | |
ATAAAGCCTCTTGCTTTCTG+TGG | + | chr3.2:71711614-71711633 | None:intergenic | 40.0% | |
ATAACCTGGTACATACTCCA+AGG | + | chr3.2:71713227-71713246 | None:intergenic | 40.0% | |
ATACCGATCCAATCTCTAGT+TGG | + | chr3.2:71712683-71712702 | None:intergenic | 40.0% | |
ATAGCAAGATTTCCAGGATG+TGG | + | chr3.2:71713618-71713637 | None:intergenic | 40.0% | |
ATCCCAATAAACCAGCTACA+AGG | + | chr3.2:71713182-71713201 | None:intergenic | 40.0% | |
ATGAAGGGAAGAATGCTGAT+AGG | - | chr3.2:71712929-71712948 | MS.gene71300:intron | 40.0% | |
ATGATGTACCACACTTTACC+TGG | - | chr3.2:71715497-71715516 | MS.gene71300:CDS | 40.0% | |
ATTACGACTTTGGCATGATG+GGG | - | chr3.2:71713661-71713680 | MS.gene71300:intron | 40.0% | |
CAAAAAGGGACGTTAAAGCT+TGG | - | chr3.2:71712553-71712572 | MS.gene71300:intron | 40.0% | |
CAATGCAAAATGGGCATATC+CGG | - | chr3.2:71711119-71711138 | MS.gene71300:CDS | 40.0% | |
CGAAGATCACTAGACAATCT+TGG | - | chr3.2:71710646-71710665 | MS.gene71300:CDS | 40.0% | |
CGAGTTCATCCACAAATTCA+CGG | + | chr3.2:71711442-71711461 | None:intergenic | 40.0% | |
CTAGCTGGTAGAAAGTTTCT+CGG | - | chr3.2:71711197-71711216 | MS.gene71300:intron | 40.0% | |
CTTTCAATTGACAACGATGC+AGG | - | chr3.2:71714134-71714153 | MS.gene71300:CDS | 40.0% | |
GAAAGCGACAGTGTTACAAA+TGG | - | chr3.2:71715952-71715971 | MS.gene71300:CDS | 40.0% | |
GAAATGCCGCCATCAAAATT+AGG | - | chr3.2:71710778-71710797 | MS.gene71300:CDS | 40.0% | |
GAATATGAACCTAAGCTCGA+AGG | - | chr3.2:71714718-71714737 | MS.gene71300:intron | 40.0% | |
GAGTTCATCCACAAATTCAC+GGG | + | chr3.2:71711441-71711460 | None:intergenic | 40.0% | |
GATAAGCAGAAGGAGGAAAA+CGG | - | chr3.2:71711328-71711347 | MS.gene71300:intron | 40.0% | |
GCTACTATGTACACGGTATT+AGG | - | chr3.2:71715974-71715993 | MS.gene71300:CDS | 40.0% | |
GGAAGTTCATTGGAGATTGT+AGG | + | chr3.2:71710967-71710986 | None:intergenic | 40.0% | |
GGATCCATCCCATGAAATAT+AGG | - | chr3.2:71714915-71714934 | MS.gene71300:intron | 40.0% | |
GGCAGAGATCAATTGATGTA+TGG | - | chr3.2:71711058-71711077 | MS.gene71300:intron | 40.0% | |
GTTATCAAAGTTCAAAGGCC+TGG | - | chr3.2:71711752-71711771 | MS.gene71300:intron | 40.0% | |
TAAAGCCTCTTGCTTTCTGT+GGG | + | chr3.2:71711613-71711632 | None:intergenic | 40.0% | |
TACATCAATTGATCTCTGCC+AGG | + | chr3.2:71711058-71711077 | None:intergenic | 40.0% | |
TATCAATATGCCACTGAACC+TGG | - | chr3.2:71713322-71713341 | MS.gene71300:intron | 40.0% | |
TATTGAGGCGTACTTGATTC+AGG | - | chr3.2:71713457-71713476 | MS.gene71300:intron | 40.0% | |
TCACATTCACACACACATTG+AGG | - | chr3.2:71713923-71713942 | MS.gene71300:CDS | 40.0% | |
TCCCAATAAACCAGCTACAA+GGG | + | chr3.2:71713181-71713200 | None:intergenic | 40.0% | |
TCTATTTCCCCGTGAATTTG+TGG | - | chr3.2:71711430-71711449 | MS.gene71300:intron | 40.0% | |
TGAAAGTTCCAGGTAAAGTG+TGG | + | chr3.2:71715508-71715527 | None:intergenic | 40.0% | |
TGCTCTGATAACAAAGGTGA+AGG | + | chr3.2:71714542-71714561 | None:intergenic | 40.0% | |
TTCACAGAAGAAAAGCAGGT+AGG | - | chr3.2:71711147-71711166 | MS.gene71300:CDS | 40.0% | |
TTCGTTGTCTTTGTCAATGC+TGG | + | chr3.2:71710943-71710962 | None:intergenic | 40.0% | |
TTGCAAAAGCTTGATTGCCT+TGG | + | chr3.2:71716036-71716055 | None:intergenic | 40.0% | |
! | AAAGTTTTGCCCTCAGATGA+AGG | - | chr3.2:71711003-71711022 | MS.gene71300:intron | 40.0% |
! | AATCTCATCACGTGCTATTG+AGG | - | chr3.2:71713442-71713461 | MS.gene71300:CDS | 40.0% |
! | ACCCTTGTAGCTGGTTTATT+GGG | - | chr3.2:71713177-71713196 | MS.gene71300:CDS | 40.0% |
! | ATTTTGTGTTAGGTATCCGG+TGG | + | chr3.2:71712431-71712450 | None:intergenic | 40.0% |
! | CAGAGAAGTGAAACTTTTGG+TGG | - | chr3.2:71712656-71712675 | MS.gene71300:CDS | 40.0% |
! | GAAGAAAAGCAGGTAGGTTT+TGG | - | chr3.2:71711153-71711172 | MS.gene71300:CDS | 40.0% |
! | GGCAATCAAGCTTTTGCAAA+TGG | - | chr3.2:71716037-71716056 | MS.gene71300:CDS | 40.0% |
! | TATTGATTAGGAGCGGTTAC+AGG | + | chr3.2:71712279-71712298 | None:intergenic | 40.0% |
! | TTCAAGTGGTGGAAGTTCAT+TGG | + | chr3.2:71710977-71710996 | None:intergenic | 40.0% |
! | TTTGGGATATCTCTCACAAC+TGG | + | chr3.2:71715045-71715064 | None:intergenic | 40.0% |
!! | AACTCTCAATGGCATTGACA+TGG | + | chr3.2:71715664-71715683 | None:intergenic | 40.0% |
!! | CAAGCTTTAACGTCCCTTTT+TGG | + | chr3.2:71712555-71712574 | None:intergenic | 40.0% |
!! | CTTTTTGCTATCTCAGTTGC+CGG | + | chr3.2:71710832-71710851 | None:intergenic | 40.0% |
!! | GGCTTGTTGCTTTAACCAAA+AGG | - | chr3.2:71714739-71714758 | MS.gene71300:intron | 40.0% |
!! | TGTGTTGATTAGGAGCAGTT+AGG | + | chr3.2:71712321-71712340 | None:intergenic | 40.0% |
!! | TTCGGGTTCCTATCATTTTG+TGG | + | chr3.2:71712047-71712066 | None:intergenic | 40.0% |
!!! | ACTTTTAGCTCTTCAAGTGG+TGG | + | chr3.2:71710988-71711007 | None:intergenic | 40.0% |
!!! | CAGCTTTAAGTTTTCTGGAC+AGG | + | chr3.2:71712621-71712640 | None:intergenic | 40.0% |
!!! | GATTTTTTTTTCCCGGGAAC+AGG | - | chr3.2:71713365-71713384 | MS.gene71300:intron | 40.0% |
!!! | GCGATCAGCTTTAAGTTTTC+TGG | + | chr3.2:71712626-71712645 | None:intergenic | 40.0% |
!!! | TTTTGCTCTGGGATTACAGA+GGG | + | chr3.2:71712130-71712149 | None:intergenic | 40.0% |
AAAGCCTCTTGCTTTCTGTG+GGG | + | chr3.2:71711612-71711631 | None:intergenic | 45.0% | |
ACAGTCTGAACCTGTGCATA+GGG | + | chr3.2:71715334-71715353 | None:intergenic | 45.0% | |
ACAGTTCGAGCAATCTCTCA+CGG | + | chr3.2:71713704-71713723 | None:intergenic | 45.0% | |
AGTAAATGTGAAAGGACCCC+TGG | + | chr3.2:71714110-71714129 | None:intergenic | 45.0% | |
AGTTACCCTGTCAATACCAC+CGG | - | chr3.2:71712412-71712431 | MS.gene71300:intron | 45.0% | |
CAACTGAAGCCTTCATCTGA+GGG | + | chr3.2:71711015-71711034 | None:intergenic | 45.0% | |
CATCGTGCAATTCTGCACAA+TGG | - | chr3.2:71711719-71711738 | MS.gene71300:intron | 45.0% | |
CCTCTTAGCTACCAATTCCA+GGG | - | chr3.2:71714090-71714109 | MS.gene71300:intron | 45.0% | |
CTACCTCTAGTACTCGAACT+CGG | + | chr3.2:71715737-71715756 | None:intergenic | 45.0% | |
CTCAGATGAAGGCTTCAGTT+GGG | - | chr3.2:71711014-71711033 | MS.gene71300:intron | 45.0% | |
CTCTTAGCTACCAATTCCAG+GGG | - | chr3.2:71714091-71714110 | MS.gene71300:intron | 45.0% | |
GAAAACGGCTTCATGGCTAA+GGG | - | chr3.2:71711343-71711362 | MS.gene71300:intron | 45.0% | |
GACAATGTCTGCTCTTGATC+TGG | + | chr3.2:71714367-71714386 | None:intergenic | 45.0% | |
GACAGGACAAGAAACTCGTT+AGG | + | chr3.2:71712604-71712623 | None:intergenic | 45.0% | |
GAGCAGACATTGTCTGCAAT+TGG | - | chr3.2:71714373-71714392 | MS.gene71300:intron | 45.0% | |
GCAGACATTGTCTGCAATTG+GGG | - | chr3.2:71714375-71714394 | MS.gene71300:intron | 45.0% | |
GGAGTTTGTGAAGCAAGTTG+AGG | - | chr3.2:71715695-71715714 | MS.gene71300:CDS | 45.0% | |
GGATGAACTCGCAAAATTGC+AGG | - | chr3.2:71711451-71711470 | MS.gene71300:intron | 45.0% | |
GGCTCAAAGCAAGCTGTTAA+TGG | - | chr3.2:71710889-71710908 | MS.gene71300:CDS | 45.0% | |
GGGTGCAAATGAAGGATATG+CGG | + | chr3.2:71713161-71713180 | None:intergenic | 45.0% | |
GGTCCAACTAGAGATTGGAT+CGG | - | chr3.2:71712677-71712696 | MS.gene71300:CDS | 45.0% | |
GTCTCCACTTTATTCTCCGA+CGG | + | chr3.2:71710862-71710881 | None:intergenic | 45.0% | |
GTCTTTGTCAATGCTGGAGT+AGG | + | chr3.2:71710937-71710956 | None:intergenic | 45.0% | |
TCCTGAAAAGTAGCATGTGC+AGG | + | chr3.2:71712882-71712901 | None:intergenic | 45.0% | |
TCTAGTCTGAAAGAGCTGCT+CGG | - | chr3.2:71715930-71715949 | MS.gene71300:CDS | 45.0% | |
TGGCTTCACAGAAGAAAAGC+AGG | - | chr3.2:71711143-71711162 | MS.gene71300:CDS | 45.0% | |
TTACGACTTTGGCATGATGG+GGG | - | chr3.2:71713662-71713681 | MS.gene71300:intron | 45.0% | |
TTCATTTGCACCCTTGTAGC+TGG | - | chr3.2:71713168-71713187 | MS.gene71300:CDS | 45.0% | |
TTCCTACTGTTGTGGCCAAA+TGG | - | chr3.2:71712222-71712241 | MS.gene71300:intron | 45.0% | |
TTGACCTTGGAGTATGTACC+AGG | - | chr3.2:71713220-71713239 | MS.gene71300:CDS | 45.0% | |
! | AATGGATCGTTTGTTGGTGC+AGG | - | chr3.2:71716055-71716074 | MS.gene71300:CDS | 45.0% |
! | AGCTACAAGGGTGCAAATGA+AGG | + | chr3.2:71713169-71713188 | None:intergenic | 45.0% |
! | CACCCTTGTAGCTGGTTTAT+TGG | - | chr3.2:71713176-71713195 | MS.gene71300:CDS | 45.0% |
! | GGTGTCAATTTGACTAGCCA+AGG | - | chr3.2:71716016-71716035 | MS.gene71300:CDS | 45.0% |
! | TTGGTGGTCCAACTAGAGAT+TGG | - | chr3.2:71712672-71712691 | MS.gene71300:CDS | 45.0% |
! | TTTGTGAAGCAAGTTGAGGC+AGG | - | chr3.2:71715699-71715718 | MS.gene71300:CDS | 45.0% |
! | TTTTCTTCTGTGAAGCCACC+CGG | + | chr3.2:71711141-71711160 | None:intergenic | 45.0% |
!! | AAGGTTGATGGAAACCGGAA+TGG | + | chr3.2:71714523-71714542 | None:intergenic | 45.0% |
!! | AGCAATGAAGGTGTTGACCT+TGG | - | chr3.2:71713207-71713226 | MS.gene71300:CDS | 45.0% |
!! | AGGTGAAGGTTGATGGAAAC+CGG | + | chr3.2:71714528-71714547 | None:intergenic | 45.0% |
!! | CATTTTGGTATGCCGGACTT+CGG | + | chr3.2:71714660-71714679 | None:intergenic | 45.0% |
!! | GTGGATACATTGACTTCTCG+TGG | - | chr3.2:71713404-71713423 | MS.gene71300:CDS | 45.0% |
!!! | CTTTTGCTCTGGGATTACAG+AGG | + | chr3.2:71712131-71712150 | None:intergenic | 45.0% |
!!! | TCCTGCACATGCTACTTTTC+AGG | - | chr3.2:71712878-71712897 | MS.gene71300:intron | 45.0% |
!!! | ATTTTAATATATAGTTATTT+AGG | + | chr3.2:71712376-71712395 | None:intergenic | 5.0% |
ACTCCGAGTTCGAGTACTAG+AGG | - | chr3.2:71715731-71715750 | MS.gene71300:CDS | 50.0% | |
AGCAACAAGCCTTCGAGCTT+AGG | + | chr3.2:71714730-71714749 | None:intergenic | 50.0% | |
CAGTTCGAGCAATCTCTCAC+GGG | + | chr3.2:71713703-71713722 | None:intergenic | 50.0% | |
CCAACTGAAGCCTTCATCTG+AGG | + | chr3.2:71711016-71711035 | None:intergenic | 50.0% | |
CCAATTGCTGCTGCAAGTCT+CGG | - | chr3.2:71711689-71711708 | MS.gene71300:intron | 50.0% | |
CCTCAGATGAAGGCTTCAGT+TGG | - | chr3.2:71711013-71711032 | MS.gene71300:intron | 50.0% | |
CCTCATGAAACCGTGCAGAA+AGG | + | chr3.2:71714821-71714840 | None:intergenic | 50.0% | |
CCTTTCTGCACGGTTTCATG+AGG | - | chr3.2:71714818-71714837 | MS.gene71300:intron | 50.0% | |
CGAAGTCCGGCATACCAAAA+TGG | - | chr3.2:71714658-71714677 | MS.gene71300:intron | 50.0% | |
CGAGTTCGAGTACTAGAGGT+AGG | - | chr3.2:71715735-71715754 | MS.gene71300:CDS | 50.0% | |
GAAGGAGGAAAACGGCTTCA+TGG | - | chr3.2:71711336-71711355 | MS.gene71300:intron | 50.0% | |
GACACCGTCGGAGAATAAAG+TGG | - | chr3.2:71710855-71710874 | MS.gene71300:CDS | 50.0% | |
GACAGTCTGAACCTGTGCAT+AGG | + | chr3.2:71715335-71715354 | None:intergenic | 50.0% | |
GACATTGTCTGCAATTGGGG+AGG | - | chr3.2:71714378-71714397 | MS.gene71300:intron | 50.0% | |
GCCTCTTAGCTACCAATTCC+AGG | - | chr3.2:71714089-71714108 | MS.gene71300:intron | 50.0% | |
GGAAAACGGCTTCATGGCTA+AGG | - | chr3.2:71711342-71711361 | MS.gene71300:intron | 50.0% | |
GGAGGGCTCCAAGATCAATA+AGG | + | chr3.2:71714170-71714189 | None:intergenic | 50.0% | |
TAGCACAAGACCAGCCATTC+CGG | - | chr3.2:71714506-71714525 | MS.gene71300:intron | 50.0% | |
TCTGCTCTTGATCTGGTGAC+TGG | + | chr3.2:71714360-71714379 | None:intergenic | 50.0% | |
TGTGAAAGGACCCCTGGAAT+TGG | + | chr3.2:71714104-71714123 | None:intergenic | 50.0% | |
TTCTCCCCACAGAAAGCAAG+AGG | - | chr3.2:71711605-71711624 | MS.gene71300:intron | 50.0% | |
TTGATGGAAACCGGAATGGC+TGG | + | chr3.2:71714519-71714538 | None:intergenic | 50.0% | |
TTTCACGCTGATCCACATCC+TGG | - | chr3.2:71713603-71713622 | MS.gene71300:intron | 50.0% | |
! | CCCTGGAATTGGTAGCTAAG+AGG | + | chr3.2:71714093-71714112 | None:intergenic | 50.0% |
!! | AGGTATCCGGTGGTATTGAC+AGG | + | chr3.2:71712421-71712440 | None:intergenic | 50.0% |
!! | CTCTGAGGAGCTTTTGCTCT+GGG | + | chr3.2:71712141-71712160 | None:intergenic | 50.0% |
!! | GGTATCCGGTGGTATTGACA+GGG | + | chr3.2:71712420-71712439 | None:intergenic | 50.0% |
!! | TCTCTGAGGAGCTTTTGCTC+TGG | + | chr3.2:71712142-71712161 | None:intergenic | 50.0% |
AAGGTCAACCCACCGAAGTC+CGG | - | chr3.2:71714645-71714664 | MS.gene71300:intron | 55.0% | |
ATAAGGCAACGACAGCCCAC+AGG | - | chr3.2:71715439-71715458 | MS.gene71300:CDS | 55.0% | |
CCGAGACTTGCAGCAGCAAT+TGG | + | chr3.2:71711692-71711711 | None:intergenic | 55.0% | |
CCTTACAGCTGACAGATCCC+CGG | + | chr3.2:71714199-71714218 | None:intergenic | 55.0% | |
GATTGCTGCACCCTATGCAC+AGG | - | chr3.2:71715321-71715340 | MS.gene71300:intron | 55.0% | |
GCAAAATGGGCATATCCGGG+TGG | - | chr3.2:71711123-71711142 | MS.gene71300:CDS | 55.0% | |
GCTTTCTGTGGGGAGAAAGC+AGG | + | chr3.2:71711602-71711621 | None:intergenic | 55.0% | |
GGCCATTTGGCCACAACAGT+AGG | + | chr3.2:71712227-71712246 | None:intergenic | 55.0% | |
TAAGGCAACGACAGCCCACA+GGG | - | chr3.2:71715440-71715459 | MS.gene71300:CDS | 55.0% | |
TCTAGCGTAGGGTGACACCA+AGG | + | chr3.2:71715075-71715094 | None:intergenic | 55.0% | |
TTGGTATGCCGGACTTCGGT+GGG | + | chr3.2:71714656-71714675 | None:intergenic | 55.0% | |
TTTGGTATGCCGGACTTCGG+TGG | + | chr3.2:71714657-71714676 | None:intergenic | 55.0% | |
ACAGCTGACAGATCCCCGGT+GGG | + | chr3.2:71714195-71714214 | None:intergenic | 60.0% | |
CCGGGGATCTGTCAGCTGTA+AGG | - | chr3.2:71714196-71714215 | MS.gene71300:CDS | 60.0% | |
GCTATCTGCCCGACGAGTTG+TGG | + | chr3.2:71715466-71715485 | None:intergenic | 60.0% | |
TACAGCTGACAGATCCCCGG+TGG | + | chr3.2:71714196-71714215 | None:intergenic | 60.0% | |
TGCTGCTGCAAGTCTCGGTC+AGG | - | chr3.2:71711694-71711713 | MS.gene71300:intron | 60.0% | |
CCACAGGGCCACAACTCGTC+GGG | - | chr3.2:71715455-71715474 | MS.gene71300:CDS | 65.0% | |
CCCACAGGGCCACAACTCGT+CGG | - | chr3.2:71715454-71715473 | MS.gene71300:CDS | 65.0% | |
CCGACGAGTTGTGGCCCTGT+GGG | + | chr3.2:71715457-71715476 | None:intergenic | 65.0% | |
CTGACAGATCCCCGGTGGGT+TGG | + | chr3.2:71714191-71714210 | None:intergenic | 65.0% | |
CTTGGAGCCCTCCAACCCAC+CGG | - | chr3.2:71714177-71714196 | MS.gene71300:CDS | 65.0% | |
TTGGAGCCCTCCAACCCACC+GGG | - | chr3.2:71714178-71714197 | MS.gene71300:CDS | 65.0% | |
!! | ACAGATCCCCGGTGGGTTGG+AGG | + | chr3.2:71714188-71714207 | None:intergenic | 65.0% |
!! | CAGATCCCCGGTGGGTTGGA+GGG | + | chr3.2:71714187-71714206 | None:intergenic | 65.0% |
CCCGACGAGTTGTGGCCCTG+TGG | + | chr3.2:71715458-71715477 | None:intergenic | 70.0% | |
TGGAGCCCTCCAACCCACCG+GGG | - | chr3.2:71714179-71714198 | MS.gene71300:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 71710598 | 71716256 | 71710598 | ID=MS.gene71300 |
chr3.2 | mRNA | 71710598 | 71716256 | 71710598 | ID=MS.gene71300.t1;Parent=MS.gene71300 |
chr3.2 | exon | 71715690 | 71716256 | 71715690 | ID=MS.gene71300.t1.exon1;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71715690 | 71716256 | 71715690 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71715382 | 71715525 | 71715382 | ID=MS.gene71300.t1.exon2;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71715382 | 71715525 | 71715382 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71715051 | 71715264 | 71715051 | ID=MS.gene71300.t1.exon3;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71715051 | 71715264 | 71715051 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71714134 | 71714227 | 71714134 | ID=MS.gene71300.t1.exon4;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71714134 | 71714227 | 71714134 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71713861 | 71713954 | 71713861 | ID=MS.gene71300.t1.exon5;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71713861 | 71713954 | 71713861 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71713613 | 71713667 | 71713613 | ID=MS.gene71300.t1.exon6;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71713613 | 71713667 | 71713613 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71713376 | 71713467 | 71713376 | ID=MS.gene71300.t1.exon7;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71713376 | 71713467 | 71713376 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71713099 | 71713269 | 71713099 | ID=MS.gene71300.t1.exon8;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71713099 | 71713269 | 71713099 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71712642 | 71712698 | 71712642 | ID=MS.gene71300.t1.exon9;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71712642 | 71712698 | 71712642 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71712455 | 71712538 | 71712455 | ID=MS.gene71300.t1.exon10;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71712455 | 71712538 | 71712455 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71712277 | 71712361 | 71712277 | ID=MS.gene71300.t1.exon11;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71712277 | 71712361 | 71712277 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71711512 | 71711573 | 71711512 | ID=MS.gene71300.t1.exon12;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71711512 | 71711573 | 71711512 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71711353 | 71711427 | 71711353 | ID=MS.gene71300.t1.exon13;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71711353 | 71711427 | 71711353 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71711102 | 71711206 | 71711102 | ID=MS.gene71300.t1.exon14;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71711102 | 71711206 | 71711102 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71710778 | 71710919 | 71710778 | ID=MS.gene71300.t1.exon15;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71710778 | 71710919 | 71710778 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
chr3.2 | exon | 71710598 | 71710671 | 71710598 | ID=MS.gene71300.t1.exon16;Parent=MS.gene71300.t1 |
chr3.2 | CDS | 71710598 | 71710671 | 71710598 | ID=cds.MS.gene71300.t1;Parent=MS.gene71300.t1 |
Gene Sequence |
Protein sequence |