Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73340.t1 | XP_003594970.1 | 98.4 | 320 | 3 | 1 | 1 | 320 | 1 | 318 | 3.50E-168 | 600.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73340.t1 | Q40784 | 72.7 | 304 | 83 | 0 | 16 | 319 | 26 | 329 | 2.6e-132 | 473.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73340.t1 | G7IN18 | 98.4 | 320 | 3 | 1 | 1 | 320 | 1 | 318 | 2.5e-168 | 600.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene73340 | 0.811214 | 7.83E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene73340 | 0.811324 | 7.41E-51 | -1.69E-46 |
| MS.gene04984 | MS.gene73340 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene73340 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene050114 | MS.gene73340 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene050116 | MS.gene73340 | 0.801549 | 8.55E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene73340 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene050623 | MS.gene73340 | -0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene73340 | 0.870341 | 1.57E-66 | -1.69E-46 |
| MS.gene050763 | MS.gene73340 | 0.869316 | 3.39E-66 | -1.69E-46 |
| MS.gene052242 | MS.gene73340 | -0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene73340 | 0.812105 | 5.01E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene73340 | 0.808215 | 3.46E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene73340 | 0.811513 | 6.74E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene73340 | 0.861668 | 8.73E-64 | -1.69E-46 |
| MS.gene055311 | MS.gene73340 | 0.819755 | 9.83E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene73340 | 0.809293 | 2.03E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene73340 | 0.815062 | 1.12E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene73340 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene73340 | 0.839263 | 1.76E-57 | -1.69E-46 |
| MS.gene057360 | MS.gene73340 | 0.813083 | 3.06E-51 | -1.69E-46 |
| MS.gene058278 | MS.gene73340 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene73340 | 0.839213 | 1.81E-57 | -1.69E-46 |
| MS.gene058639 | MS.gene73340 | 0.842554 | 2.41E-58 | -1.69E-46 |
| MS.gene058758 | MS.gene73340 | 0.831943 | 1.25E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene73340 | 0.828428 | 9.04E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene73340 | 0.81329 | 2.76E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene73340 | 0.822823 | 1.93E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene73340 | 0.849714 | 2.71E-60 | -1.69E-46 |
| MS.gene060563 | MS.gene73340 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene73340 | 0.805196 | 1.50E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene73340 | 0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene060870 | MS.gene73340 | 0.810661 | 1.03E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene73340 | 0.822926 | 1.82E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73340 | MS.gene024472 | PPI |
| MS.gene73340 | MS.gene21644 | PPI |
| MS.gene73340 | MS.gene40102 | PPI |
| MS.gene73340 | MS.gene025937 | PPI |
| MS.gene73340 | MS.gene024663 | PPI |
| MS.gene73340 | MS.gene053627 | PPI |
| MS.gene73340 | MS.gene90270 | PPI |
| MS.gene73340 | MS.gene053078 | PPI |
| MS.gene73340 | MS.gene050620 | PPI |
| MS.gene22823 | MS.gene73340 | PPI |
| MS.gene73340 | MS.gene82807 | PPI |
| MS.gene73340 | MS.gene032655 | PPI |
| MS.gene73340 | MS.gene072750 | PPI |
| MS.gene73340 | MS.gene028526 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73340.t1 | MTR_2g036810 | 98.750 | 320 | 2 | 1 | 1 | 320 | 1 | 318 | 0.0 | 653 |
| MS.gene73340.t1 | MTR_4g005740 | 76.254 | 299 | 71 | 0 | 19 | 317 | 13 | 311 | 0.0 | 503 |
| MS.gene73340.t1 | MTR_5g009670 | 67.347 | 294 | 94 | 1 | 12 | 305 | 13 | 304 | 1.27e-155 | 437 |
| MS.gene73340.t1 | MTR_4g092780 | 65.781 | 301 | 100 | 2 | 16 | 315 | 16 | 314 | 3.69e-151 | 427 |
| MS.gene73340.t1 | MTR_7g116910 | 65.116 | 301 | 102 | 2 | 16 | 315 | 16 | 314 | 3.98e-151 | 427 |
| MS.gene73340.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 21 | 319 | 10 | 303 | 4.56e-129 | 370 |
| MS.gene73340.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 21 | 319 | 68 | 361 | 5.41e-129 | 372 |
| MS.gene73340.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 21 | 319 | 57 | 350 | 2.26e-128 | 370 |
| MS.gene73340.t1 | MTR_5g009670 | 65.966 | 238 | 79 | 1 | 12 | 249 | 13 | 248 | 2.05e-120 | 347 |
| MS.gene73340.t1 | MTR_5g020640 | 34.146 | 287 | 168 | 7 | 16 | 300 | 43 | 310 | 9.84e-42 | 147 |
| MS.gene73340.t1 | MTR_5g020640 | 38.674 | 181 | 101 | 4 | 16 | 196 | 43 | 213 | 4.67e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73340.t1 | AT5G57330 | 80.000 | 305 | 61 | 0 | 14 | 318 | 8 | 312 | 0.0 | 528 |
| MS.gene73340.t1 | AT3G61610 | 65.667 | 300 | 100 | 2 | 16 | 314 | 16 | 313 | 3.95e-151 | 427 |
| MS.gene73340.t1 | AT3G61610 | 65.667 | 300 | 100 | 2 | 16 | 314 | 10 | 307 | 4.24e-151 | 426 |
| MS.gene73340.t1 | AT3G01590 | 63.880 | 299 | 104 | 3 | 21 | 319 | 10 | 304 | 3.38e-143 | 406 |
| MS.gene73340.t1 | AT3G01590 | 63.880 | 299 | 104 | 3 | 21 | 319 | 10 | 304 | 3.38e-143 | 406 |
| MS.gene73340.t1 | AT5G14500 | 63.211 | 299 | 106 | 3 | 21 | 319 | 10 | 304 | 5.56e-142 | 403 |
| MS.gene73340.t1 | AT4G23730 | 63.356 | 292 | 103 | 3 | 16 | 305 | 17 | 306 | 2.37e-140 | 399 |
| MS.gene73340.t1 | AT4G23730 | 62.416 | 298 | 102 | 4 | 16 | 305 | 17 | 312 | 2.98e-138 | 394 |
| MS.gene73340.t1 | AT5G14500 | 58.333 | 324 | 106 | 4 | 21 | 319 | 10 | 329 | 7.49e-136 | 389 |
| MS.gene73340.t1 | AT4G23730 | 64.207 | 271 | 93 | 3 | 37 | 305 | 3 | 271 | 8.60e-133 | 379 |
| MS.gene73340.t1 | AT4G25900 | 59.170 | 289 | 111 | 3 | 17 | 305 | 34 | 315 | 7.92e-128 | 368 |
| MS.gene73340.t1 | AT5G66530 | 34.237 | 295 | 173 | 8 | 8 | 300 | 2 | 277 | 2.91e-46 | 158 |
| MS.gene73340.t1 | AT5G66530 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.40e-46 | 158 |
| MS.gene73340.t1 | AT5G66530 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.40e-46 | 158 |
| MS.gene73340.t1 | AT5G66530 | 34.237 | 295 | 173 | 8 | 8 | 300 | 30 | 305 | 5.40e-46 | 158 |
Find 84 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTCTATGGCTGATTTC+GGG | 0.245986 | 2.4:+52697426 | MS.gene73340:CDS |
| TAAGCAAATGTGAACGAAAA+TGG | 0.285438 | 2.4:-52694978 | None:intergenic |
| GCAAAGTCTATGGCTGATTT+CGG | 0.300409 | 2.4:+52697425 | MS.gene73340:CDS |
| TGATCCCCAGAGAGTTCTTC+AGG | 0.316466 | 2.4:+52697583 | MS.gene73340:CDS |
| CACATGGATTTGCTAGAAAT+CGG | 0.325106 | 2.4:+52694610 | MS.gene73340:CDS |
| TCAATGATTGCAATCTTTGT+AGG | 0.348711 | 2.4:-52696814 | None:intergenic |
| CATACTTGTGGAAAGCATAT+TGG | 0.354504 | 2.4:-52693552 | None:intergenic |
| TACCAGTGGTGTGGAATCCT+TGG | 0.355984 | 2.4:+52697393 | MS.gene73340:intron |
| CTCAAATTATTTGTTGGAAA+AGG | 0.368191 | 2.4:-52694660 | None:intergenic |
| CTTCCTTTCCATTCTTCTCC+AGG | 0.370137 | 2.4:-52697515 | None:intergenic |
| ATCGAGACCATTGATACCTT+TGG | 0.378504 | 2.4:-52692198 | None:intergenic |
| CAAGGAGCGCTTTACTGAAC+AGG | 0.381888 | 2.4:+52696036 | MS.gene73340:CDS |
| GATTTGCTAGAAATCGGGTT+TGG | 0.388396 | 2.4:+52694616 | MS.gene73340:CDS |
| GCATGTGTTCAGTGAAGTTC+GGG | 0.389823 | 2.4:+52695970 | MS.gene73340:intron |
| TGCATGTGTTCAGTGAAGTT+CGG | 0.389851 | 2.4:+52695969 | MS.gene73340:intron |
| ATTTGCTAGAAATCGGGTTT+GGG | 0.400244 | 2.4:+52694617 | MS.gene73340:CDS |
| TGATGTTGACATCTCGGATT+CGG | 0.401283 | 2.4:+52694934 | MS.gene73340:CDS |
| GTACCGTCTGAGGGTAGCTT+TGG | 0.409016 | 2.4:+52694896 | MS.gene73340:CDS |
| CTGAAGAAGACATGAAGATC+TGG | 0.413789 | 2.4:+52694715 | MS.gene73340:CDS |
| AGCTGCCCTGAAGAACTCTC+TGG | 0.420120 | 2.4:-52697589 | None:intergenic |
| GTTTGCAAACCATGGAAACT+TGG | 0.421066 | 2.4:+52694584 | MS.gene73340:intron |
| ACCAGTGGTGTGGAATCCTT+GGG | 0.429036 | 2.4:+52697394 | MS.gene73340:intron |
| GGATAAGAAAGCAAAGTCTA+TGG | 0.429417 | 2.4:+52697415 | MS.gene73340:CDS |
| GCTTTGCTCAAATTATTTGT+TGG | 0.430674 | 2.4:-52694666 | None:intergenic |
| ATCTTCATGTCTTCTTCAGA+GGG | 0.440145 | 2.4:-52694711 | None:intergenic |
| TACCGTCTGAGGGTAGCTTT+GGG | 0.445671 | 2.4:+52694897 | MS.gene73340:CDS |
| GATCTTCATGTCTTCTTCAG+AGG | 0.451439 | 2.4:-52694712 | None:intergenic |
| CATGTGATTCCAAGTTTCCA+TGG | 0.458751 | 2.4:-52694593 | None:intergenic |
| ACATGGATTTGCTAGAAATC+GGG | 0.458820 | 2.4:+52694611 | MS.gene73340:CDS |
| AGATAGTACTGACCAGCATC+AGG | 0.460058 | 2.4:-52696880 | None:intergenic |
| CTGAGGGTAGCTTTGGGACC+CGG | 0.476818 | 2.4:+52694903 | MS.gene73340:CDS |
| CTTTGAAACCTGGAGAAGAA+TGG | 0.477692 | 2.4:+52697507 | MS.gene73340:CDS |
| GAGATTTGATGTTGACATCT+CGG | 0.482398 | 2.4:+52694928 | MS.gene73340:CDS |
| GACTTTGCTTTCTTATCCCA+AGG | 0.482545 | 2.4:-52697410 | None:intergenic |
| GATACCTTTGGTTAACGTAA+AGG | 0.483563 | 2.4:-52692186 | None:intergenic |
| TGTCAACATCAAATCTCCTC+CGG | 0.489606 | 2.4:-52694922 | None:intergenic |
| ACGTTAACCAAAGGTATCAA+TGG | 0.500062 | 2.4:+52692191 | MS.gene73340:CDS |
| TTATTTGTTGGAAAAGGAGG+AGG | 0.506185 | 2.4:-52694654 | None:intergenic |
| TTCAGTGAAGTTCGGGTAGA+GGG | 0.507198 | 2.4:+52695977 | MS.gene73340:intron |
| TGCCCACTACAGTAACTAGA+TGG | 0.512664 | 2.4:-52697557 | None:intergenic |
| AGAGGCTGCTAATATTGAAA+AGG | 0.515286 | 2.4:+52697478 | MS.gene73340:CDS |
| AAAGATGGCCTTCCTGATGC+TGG | 0.515378 | 2.4:+52696868 | MS.gene73340:CDS |
| TTCCATCTAGTTACTGTAGT+GGG | 0.517507 | 2.4:+52697555 | MS.gene73340:CDS |
| AGGTATCAATGGTCTCGATA+AGG | 0.518328 | 2.4:+52692202 | MS.gene73340:CDS |
| AGGAGGAGGGTCATCTTCAA+TGG | 0.524499 | 2.4:-52694640 | None:intergenic |
| AAATTATTTGTTGGAAAAGG+AGG | 0.527511 | 2.4:-52694657 | None:intergenic |
| GCTGCCCTGAAGAACTCTCT+GGG | 0.528642 | 2.4:-52697588 | None:intergenic |
| GGCTATCTTTAAGCCTCCTA+AGG | 0.532351 | 2.4:+52693512 | MS.gene73340:intron |
| ATCCCTCCACGAATAGCCTT+AGG | 0.532408 | 2.4:-52693528 | None:intergenic |
| ACATGAAGATCTGGAATCAC+AGG | 0.534377 | 2.4:+52694724 | MS.gene73340:CDS |
| CATGGAAACTTGGAATCACA+TGG | 0.537927 | 2.4:+52694594 | MS.gene73340:CDS |
| GTTCAGTGAAGTTCGGGTAG+AGG | 0.538925 | 2.4:+52695976 | MS.gene73340:intron |
| GGTAGAGGGATTAGAGACCT+TGG | 0.541717 | 2.4:+52695991 | MS.gene73340:CDS |
| AAGCCTCCTAAGGCTATTCG+TGG | 0.556125 | 2.4:+52693522 | MS.gene73340:CDS |
| TATTTGCAGTTTGCAAACCA+TGG | 0.562559 | 2.4:+52694576 | MS.gene73340:intron |
| TAAGCATATGCTTTGTGTAG+AGG | 0.564500 | 2.4:+52697460 | MS.gene73340:CDS |
| GATCCCCAGAGAGTTCTTCA+GGG | 0.569162 | 2.4:+52697584 | MS.gene73340:CDS |
| ATTCGGAACACAAATAGTGA+TGG | 0.571718 | 2.4:+52694951 | MS.gene73340:CDS |
| AAGGCTATCACTTTGAAACC+TGG | 0.573783 | 2.4:+52697497 | MS.gene73340:CDS |
| ACGGTGGACATGTGACTTCG+TGG | 0.575222 | 2.4:+52692571 | MS.gene73340:CDS |
| CTCCTAAGGCTATTCGTGGA+GGG | 0.577936 | 2.4:+52693526 | MS.gene73340:CDS |
| TATTTGTTGGAAAAGGAGGA+GGG | 0.579815 | 2.4:-52694653 | None:intergenic |
| TCTTGACAACTTGCAGAACA+AGG | 0.580190 | 2.4:+52696018 | MS.gene73340:CDS |
| GTCAACATCAAATCTCCTCC+GGG | 0.583810 | 2.4:-52694921 | None:intergenic |
| CAAGTTGTCAAGATAATCCA+AGG | 0.585326 | 2.4:-52696008 | None:intergenic |
| TCTTCCTTTACGTTAACCAA+AGG | 0.595171 | 2.4:+52692182 | MS.gene73340:CDS |
| TTCGGAACACAAATAGTGAT+GGG | 0.598605 | 2.4:+52694952 | MS.gene73340:CDS |
| TTTAAGAATCAAATCAACAA+AGG | 0.599913 | 2.4:-52694688 | None:intergenic |
| CCTCCACGAATAGCCTTAGG+AGG | 0.604158 | 2.4:-52693525 | None:intergenic |
| ATCTCGTGGCGCTTCCGCTG+AGG | 0.604527 | 2.4:+52692238 | MS.gene73340:CDS |
| GTTCTTCTTCGTGAATCTCG+TGG | 0.608797 | 2.4:+52692224 | MS.gene73340:CDS |
| AAACCTGGAGAAGAATGGAA+AGG | 0.623143 | 2.4:+52697512 | MS.gene73340:CDS |
| TTGTAGATTTATCTGTACGG+TGG | 0.625261 | 2.4:+52692555 | MS.gene73340:intron |
| AAAGTCTATGGCTGATTTCG+GGG | 0.626184 | 2.4:+52697427 | MS.gene73340:CDS |
| GATTTGTAGATTTATCTGTA+CGG | 0.629615 | 2.4:+52692552 | MS.gene73340:intron |
| GTCCCAAAGCTACCCTCAGA+CGG | 0.631656 | 2.4:-52694899 | None:intergenic |
| CCTCCTAAGGCTATTCGTGG+AGG | 0.641484 | 2.4:+52693525 | MS.gene73340:CDS |
| AGTACTGACCAGCATCAGGA+AGG | 0.642555 | 2.4:-52696876 | None:intergenic |
| GTTCCATCTAGTTACTGTAG+TGG | 0.643465 | 2.4:+52697554 | MS.gene73340:CDS |
| AAGGAGCGCTTTACTGAACA+GGG | 0.674715 | 2.4:+52696037 | MS.gene73340:CDS |
| CTGCCCTGAAGAACTCTCTG+GGG | 0.675919 | 2.4:-52697587 | None:intergenic |
| GTGGAAGAATGATCATGCTG+AGG | 0.679697 | 2.4:+52692590 | MS.gene73340:CDS |
| AGGGTAGCTTTGGGACCCGG+AGG | 0.683403 | 2.4:+52694906 | MS.gene73340:CDS |
| CGGTTACGATTATACCTCAG+CGG | 0.755309 | 2.4:-52692252 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATAATAAAA+AGG | - | chr2.4:52697373-52697392 | None:intergenic | 0.0% |
| !! | AATTGTCAAAAAAAATAAAA+AGG | - | chr2.4:52693590-52693609 | None:intergenic | 10.0% |
| !! | CAAATTAATATACTATTAAT+TGG | + | chr2.4:52695193-52695212 | MS.gene73340:intron | 10.0% |
| !! | TTAATTATATCAATTTCTAT+TGG | - | chr2.4:52694443-52694462 | None:intergenic | 10.0% |
| !!! | TAACTTTTTTTTTGAAAAAA+AGG | + | chr2.4:52696197-52696216 | MS.gene73340:intron | 10.0% |
| !! | AAAAAAGTTATTCAAATGAA+AGG | - | chr2.4:52696187-52696206 | None:intergenic | 15.0% |
| !! | AAATCATTACAATTTCTAAA+TGG | + | chr2.4:52694488-52694507 | MS.gene73340:intron | 15.0% |
| !! | TAAAATTAATGAAATGTTGT+TGG | - | chr2.4:52695168-52695187 | None:intergenic | 15.0% |
| !! | TAAATATAAAAGAACAGATA+AGG | + | chr2.4:52696944-52696963 | MS.gene73340:intron | 15.0% |
| !! | TATATCATAATACTAAATTG+CGG | - | chr2.4:52692995-52693014 | None:intergenic | 15.0% |
| !!! | ATAAACCTTTTATTACAATT+AGG | + | chr2.4:52697304-52697323 | MS.gene73340:intron | 15.0% |
| !!! | ATTTTAGTATTTTTTAGTGT+TGG | + | chr2.4:52692678-52692697 | MS.gene73340:intron | 15.0% |
| !!! | TATTTTTTTTTTTTTACCAG+TGG | + | chr2.4:52697379-52697398 | MS.gene73340:intron | 15.0% |
| !!! | TTACAATTTTTTTTAATACC+TGG | + | chr2.4:52694774-52694793 | MS.gene73340:intron | 15.0% |
| !! | AAAAGAACAAGAAATATATG+TGG | - | chr2.4:52695880-52695899 | None:intergenic | 20.0% |
| !! | AAAAGGAAAATGAAAAATAG+AGG | + | chr2.4:52692832-52692851 | MS.gene73340:intron | 20.0% |
| !! | ACAGAATAAGTATAGAATAA+AGG | - | chr2.4:52696477-52696496 | None:intergenic | 20.0% |
| !! | AGAATAAGTATAGAATAAAG+GGG | - | chr2.4:52696475-52696494 | None:intergenic | 20.0% |
| !! | ATTACAACAACAACAAAAAA+AGG | - | chr2.4:52692936-52692955 | None:intergenic | 20.0% |
| !! | ATTAGAGTTTAGAAAAATAC+AGG | - | chr2.4:52696650-52696669 | None:intergenic | 20.0% |
| !! | ATTCATTTGACTGAAATAAA+TGG | + | chr2.4:52696154-52696173 | MS.gene73340:intron | 20.0% |
| !! | CAGAATAAGTATAGAATAAA+GGG | - | chr2.4:52696476-52696495 | None:intergenic | 20.0% |
| !! | CATTAATCGTTGTTAATTAA+CGG | + | chr2.4:52692410-52692429 | MS.gene73340:intron | 20.0% |
| !! | GATATTAATATTTGCTTCAA+TGG | + | chr2.4:52693329-52693348 | MS.gene73340:intron | 20.0% |
| !! | TACAACCTAATTGTAATAAA+AGG | - | chr2.4:52697312-52697331 | None:intergenic | 20.0% |
| !! | TCTATACTTATTCTGTAATA+GGG | + | chr2.4:52696481-52696500 | MS.gene73340:intron | 20.0% |
| !! | TTAACAACAATGTTAATTGA+GGG | + | chr2.4:52693969-52693988 | MS.gene73340:intron | 20.0% |
| !! | TTCTATACTTATTCTGTAAT+AGG | + | chr2.4:52696480-52696499 | MS.gene73340:intron | 20.0% |
| !! | TTGAAGCAAATATTAATATC+AGG | - | chr2.4:52693329-52693348 | None:intergenic | 20.0% |
| !! | TTGATTAGATGATTGATATA+TGG | + | chr2.4:52693452-52693471 | MS.gene73340:intron | 20.0% |
| !! | TTGTAATACAGTATTCTTAT+GGG | + | chr2.4:52697199-52697218 | MS.gene73340:intron | 20.0% |
| !! | TTTAAGAATCAAATCAACAA+AGG | - | chr2.4:52694691-52694710 | None:intergenic | 20.0% |
| !!! | AAAGAAAGTTTTCATTATCT+TGG | - | chr2.4:52694335-52694354 | None:intergenic | 20.0% |
| !!! | GAATCTAGAATAATTGAAAT+CGG | - | chr2.4:52692339-52692358 | None:intergenic | 20.0% |
| !!! | TAGCTTTACTTTCTAAAAAT+TGG | + | chr2.4:52695900-52695919 | MS.gene73340:intron | 20.0% |
| !!! | TTTTTTTTTGTATAGCTCAA+GGG | + | chr2.4:52695361-52695380 | MS.gene73340:intron | 20.0% |
| !!! | TTTTTTTTTTGTATAGCTCA+AGG | + | chr2.4:52695360-52695379 | MS.gene73340:intron | 20.0% |
| ! | AAATAGTAAGTACATACTTG+TGG | - | chr2.4:52693567-52693586 | None:intergenic | 25.0% |
| ! | AACCTATCATTTCAAGAAAA+AGG | - | chr2.4:52696773-52696792 | None:intergenic | 25.0% |
| ! | ACAACTTTACAGGAAAATAT+TGG | - | chr2.4:52697041-52697060 | None:intergenic | 25.0% |
| ! | ACAATATATAGTTCCTGAAA+AGG | + | chr2.4:52696252-52696271 | MS.gene73340:intron | 25.0% |
| ! | ACCTATCATTTCAAGAAAAA+GGG | - | chr2.4:52696772-52696791 | None:intergenic | 25.0% |
| ! | AGTATATCTTACAACTTTAC+AGG | - | chr2.4:52697051-52697070 | None:intergenic | 25.0% |
| ! | AGTTTAATGTTGTGATTTAG+AGG | - | chr2.4:52694145-52694164 | None:intergenic | 25.0% |
| ! | ATAGATCAAGAACAGAAAAA+CGG | - | chr2.4:52692275-52692294 | None:intergenic | 25.0% |
| ! | ATTTGACTGTGAAATTTAGA+AGG | + | chr2.4:52692467-52692486 | MS.gene73340:intron | 25.0% |
| ! | CAGAGCTAACTAATTAAAAT+TGG | + | chr2.4:52693247-52693266 | MS.gene73340:intron | 25.0% |
| ! | CAGCTGAATTTATAATAGAA+AGG | + | chr2.4:52695239-52695258 | MS.gene73340:intron | 25.0% |
| ! | CTATACTTATTCTGTAATAG+GGG | + | chr2.4:52696482-52696501 | MS.gene73340:intron | 25.0% |
| ! | GAAGATATTAAAGTTAAACC+AGG | - | chr2.4:52694795-52694814 | None:intergenic | 25.0% |
| ! | GATTTGTAGATTTATCTGTA+CGG | + | chr2.4:52692552-52692571 | MS.gene73340:intron | 25.0% |
| ! | GTTAACAACAATGTTAATTG+AGG | + | chr2.4:52693968-52693987 | MS.gene73340:intron | 25.0% |
| ! | GTTGTAATACAGTATTCTTA+TGG | + | chr2.4:52697198-52697217 | MS.gene73340:intron | 25.0% |
| ! | TAAAAGCAAGAAACATATGT+AGG | - | chr2.4:52695852-52695871 | None:intergenic | 25.0% |
| ! | TAACCTGAAACTAAATAGAA+GGG | - | chr2.4:52696103-52696122 | None:intergenic | 25.0% |
| ! | TAAGCTAGGATTTATATTTG+TGG | - | chr2.4:52693688-52693707 | None:intergenic | 25.0% |
| ! | TATGTGCATACAAGTTATTA+TGG | + | chr2.4:52694106-52694125 | MS.gene73340:intron | 25.0% |
| ! | TCAATATTTCACATAACAAG+CGG | - | chr2.4:52696231-52696250 | None:intergenic | 25.0% |
| ! | TCATTGATCATGAAAAAAAG+AGG | + | chr2.4:52696830-52696849 | MS.gene73340:CDS | 25.0% |
| ! | TCTAAGTTATCAAATTTGAG+TGG | + | chr2.4:52697335-52697354 | MS.gene73340:intron | 25.0% |
| ! | TTAACCTGAAACTAAATAGA+AGG | - | chr2.4:52696104-52696123 | None:intergenic | 25.0% |
| ! | TTAATTTCATACTTGAGTGT+AGG | - | chr2.4:52697270-52697289 | None:intergenic | 25.0% |
| ! | TTTGGTATGAATTCATCAAT+AGG | - | chr2.4:52696314-52696333 | None:intergenic | 25.0% |
| !! | AAAAAATGAAAAGCCTTTTC+AGG | - | chr2.4:52696268-52696287 | None:intergenic | 25.0% |
| !! | AAAATTGGCTTCAAAATGAA+CGG | + | chr2.4:52693262-52693281 | MS.gene73340:intron | 25.0% |
| !! | AAATTATTTGTTGGAAAAGG+AGG | - | chr2.4:52694660-52694679 | None:intergenic | 25.0% |
| !! | AAATTTGTAGCTTGCAAATT+CGG | + | chr2.4:52695734-52695753 | MS.gene73340:intron | 25.0% |
| !! | CGAAAAATTTTCTATCGAAA+AGG | + | chr2.4:52692730-52692749 | MS.gene73340:intron | 25.0% |
| !! | CGATTAATTAGAGTATCTTT+AGG | + | chr2.4:52693097-52693116 | MS.gene73340:intron | 25.0% |
| !! | CTCAAATTATTTGTTGGAAA+AGG | - | chr2.4:52694663-52694682 | None:intergenic | 25.0% |
| !! | TACTTTCTAAAAATTGGTTG+TGG | + | chr2.4:52695906-52695925 | MS.gene73340:intron | 25.0% |
| !! | TCGATAATTTTCTATCGAAA+AGG | + | chr2.4:52692815-52692834 | MS.gene73340:intron | 25.0% |
| !!! | AAAGTCAGAGTTTAAGTTTT+AGG | - | chr2.4:52693651-52693670 | None:intergenic | 25.0% |
| !!! | ATCGAATTTAATTTTCTCAC+AGG | - | chr2.4:52693718-52693737 | None:intergenic | 25.0% |
| !!! | ATTTTTCAGTATCAGACATA+AGG | + | chr2.4:52695009-52695028 | MS.gene73340:CDS | 25.0% |
| !!! | CTGTATTCTTTTTTAGATCA+CGG | + | chr2.4:52692858-52692877 | MS.gene73340:intron | 25.0% |
| !!! | TTCACAGGTTTTTTTTTTTG+AGG | + | chr2.4:52696705-52696724 | MS.gene73340:intron | 25.0% |
| !!! | TTTTGTTTGTTTTGTAACCA+TGG | + | chr2.4:52695128-52695147 | MS.gene73340:intron | 25.0% |
| AAAGATATTCAAGTGAGACT+TGG | - | chr2.4:52697143-52697162 | None:intergenic | 30.0% | |
| AATTATTCTAGATTCCGATC+TGG | + | chr2.4:52692344-52692363 | MS.gene73340:intron | 30.0% | |
| ACCAAGTAGTCAACATATTA+GGG | + | chr2.4:52693912-52693931 | MS.gene73340:intron | 30.0% | |
| ACTTTCCTTGTATTGTTACT+TGG | - | chr2.4:52697075-52697094 | None:intergenic | 30.0% | |
| AGCAACAATTCTAGATATCT+AGG | + | chr2.4:52694215-52694234 | MS.gene73340:intron | 30.0% | |
| ATATCTTTGAATGCCTTGAT+TGG | + | chr2.4:52697155-52697174 | MS.gene73340:intron | 30.0% | |
| ATCATTTCAAGAAAAAGGGA+AGG | - | chr2.4:52696768-52696787 | None:intergenic | 30.0% | |
| CAAAACATTTACCCTTAATC+CGG | - | chr2.4:52693363-52693382 | None:intergenic | 30.0% | |
| GAAGCATATTGTTTCAACAT+CGG | - | chr2.4:52695679-52695698 | None:intergenic | 30.0% | |
| GACATGTTTCATTCAGATAT+AGG | - | chr2.4:52696579-52696598 | None:intergenic | 30.0% | |
| GATGAAATTACTGAAAACAG+AGG | + | chr2.4:52694285-52694304 | MS.gene73340:intron | 30.0% | |
| GATGCAACAAAATCAAATCA+AGG | - | chr2.4:52693805-52693824 | None:intergenic | 30.0% | |
| GCTTTGCTCAAATTATTTGT+TGG | - | chr2.4:52694669-52694688 | None:intergenic | 30.0% | |
| GTTTCATTCAGATATAGGTT+GGG | - | chr2.4:52696574-52696593 | None:intergenic | 30.0% | |
| TAAGCAAATGTGAACGAAAA+TGG | - | chr2.4:52694981-52695000 | None:intergenic | 30.0% | |
| TACATACAATGCTTCATTGT+CGG | - | chr2.4:52693180-52693199 | None:intergenic | 30.0% | |
| TACTACCAAGTAACAATACA+AGG | + | chr2.4:52697067-52697086 | MS.gene73340:intron | 30.0% | |
| TATCTTTGAATGCCTTGATT+GGG | + | chr2.4:52697156-52697175 | MS.gene73340:intron | 30.0% | |
| TCAATGATTGCAATCTTTGT+AGG | - | chr2.4:52696817-52696836 | None:intergenic | 30.0% | |
| TGAACTTACAAAAACAAGTG+TGG | + | chr2.4:52695602-52695621 | MS.gene73340:intron | 30.0% | |
| TGTTTCATTCAGATATAGGT+TGG | - | chr2.4:52696575-52696594 | None:intergenic | 30.0% | |
| TTGTTAACTACTCTAAGTAG+AGG | - | chr2.4:52693956-52693975 | None:intergenic | 30.0% | |
| TTTACAGGAAAATATTGGCA+TGG | - | chr2.4:52697036-52697055 | None:intergenic | 30.0% | |
| TTTGAATCAGAAGTAAGTCT+GGG | + | chr2.4:52696073-52696092 | MS.gene73340:intron | 30.0% | |
| ! | AAATTGGCTTCAAAATGAAC+GGG | + | chr2.4:52693263-52693282 | MS.gene73340:intron | 30.0% |
| ! | AAATTTTTCGCCAACAAACT+CGG | - | chr2.4:52692720-52692739 | None:intergenic | 30.0% |
| ! | CGATAATTTTCCTATCGAAA+AGG | + | chr2.4:52692773-52692792 | MS.gene73340:intron | 30.0% |
| ! | CTTTCATTTTCCTTTTCGAT+AGG | - | chr2.4:52692743-52692762 | None:intergenic | 30.0% |
| ! | GGTTTAGTTGTTGTATCTTT+TGG | + | chr2.4:52695428-52695447 | MS.gene73340:intron | 30.0% |
| ! | TAGAATTGTTGCTTCTAGAT+TGG | - | chr2.4:52694208-52694227 | None:intergenic | 30.0% |
| ! | TAGAGGTTAGTTATCTAACT+TGG | - | chr2.4:52693939-52693958 | None:intergenic | 30.0% |
| ! | TCCCTTTTTCTTGAAATGAT+AGG | + | chr2.4:52696768-52696787 | MS.gene73340:intron | 30.0% |
| ! | TTACGAAACTGTGTTTGTTT+TGG | + | chr2.4:52692652-52692671 | MS.gene73340:intron | 30.0% |
| ! | TTTCCCTTCTATTTAGTTTC+AGG | + | chr2.4:52696097-52696116 | MS.gene73340:intron | 30.0% |
| ! | TTTTGAATCAGAAGTAAGTC+TGG | + | chr2.4:52696072-52696091 | MS.gene73340:intron | 30.0% |
| !! | CAATGAAGCATTGTATGTAT+CGG | + | chr2.4:52693181-52693200 | MS.gene73340:intron | 30.0% |
| !! | CATTTACTTTTCCTTCATGT+GGG | + | chr2.4:52695534-52695553 | MS.gene73340:intron | 30.0% |
| !! | TATTGGTTTCGTTGTTTCTT+GGG | - | chr2.4:52694426-52694445 | None:intergenic | 30.0% |
| !! | TCATTTACTTTTCCTTCATG+TGG | + | chr2.4:52695533-52695552 | MS.gene73340:intron | 30.0% |
| !! | TTTTTGAGGAAATGTTTCAC+AGG | + | chr2.4:52696719-52696738 | MS.gene73340:intron | 30.0% |
| !!! | ACATTTGTTTTGCGTAAAGA+TGG | + | chr2.4:52696853-52696872 | MS.gene73340:CDS | 30.0% |
| !!! | ATGTTTCACAGGTTTTTTGT+TGG | + | chr2.4:52696730-52696749 | MS.gene73340:intron | 30.0% |
| !!! | ATTGCTTTTTCTCAGTAGTA+AGG | + | chr2.4:52692614-52692633 | MS.gene73340:CDS | 30.0% |
| !!! | TTAAGAGATGCTGGTTTTAT+AGG | + | chr2.4:52696120-52696139 | MS.gene73340:intron | 30.0% |
| !!! | TTTGTTTTGTAACCATGGTT+AGG | + | chr2.4:52695133-52695152 | MS.gene73340:intron | 30.0% |
| !!! | TTTTTTTTTTACCAGTGGTG+TGG | + | chr2.4:52697384-52697403 | MS.gene73340:intron | 30.0% |
| AAACCTCACTTAGTCTGATA+AGG | + | chr2.4:52695407-52695426 | MS.gene73340:intron | 35.0% | |
| AAACCTTATCAGACTAAGTG+AGG | - | chr2.4:52695413-52695432 | None:intergenic | 35.0% | |
| AAGTGAGGTTTGACCAAATA+AGG | - | chr2.4:52695398-52695417 | None:intergenic | 35.0% | |
| AATATGCCCAGTTCTCAAAA+CGG | - | chr2.4:52693858-52693877 | None:intergenic | 35.0% | |
| AATTTAGTTGCCGAGTTTGT+TGG | + | chr2.4:52692707-52692726 | MS.gene73340:intron | 35.0% | |
| ACTTATTCTGTAATAGGGGT+AGG | + | chr2.4:52696486-52696505 | MS.gene73340:intron | 35.0% | |
| AGAGGCTGCTAATATTGAAA+AGG | + | chr2.4:52697478-52697497 | MS.gene73340:CDS | 35.0% | |
| AGCATAAGTCGTATTGAAGA+AGG | + | chr2.4:52693738-52693757 | MS.gene73340:intron | 35.0% | |
| ATATAAGCAACAAAACGCAG+AGG | - | chr2.4:52696429-52696448 | None:intergenic | 35.0% | |
| ATCTTCATGTCTTCTTCAGA+GGG | - | chr2.4:52694714-52694733 | None:intergenic | 35.0% | |
| ATCTTTGAATGCCTTGATTG+GGG | + | chr2.4:52697157-52697176 | MS.gene73340:intron | 35.0% | |
| ATTCGGAACACAAATAGTGA+TGG | + | chr2.4:52694951-52694970 | MS.gene73340:CDS | 35.0% | |
| ATTGAGGGTCTATGTAAGAT+TGG | + | chr2.4:52693984-52694003 | MS.gene73340:intron | 35.0% | |
| CAAGTTGTCAAGATAATCCA+AGG | - | chr2.4:52696011-52696030 | None:intergenic | 35.0% | |
| CACATGCAAATAAACCAGTT+AGG | - | chr2.4:52695957-52695976 | None:intergenic | 35.0% | |
| CATAAGTCGTATTGAAGAAG+GGG | + | chr2.4:52693740-52693759 | MS.gene73340:intron | 35.0% | |
| CATCTAATCAACATGAAAGC+TGG | - | chr2.4:52693443-52693462 | None:intergenic | 35.0% | |
| CGAAATATACCTAACCAGAT+CGG | - | chr2.4:52692361-52692380 | None:intergenic | 35.0% | |
| CTAAAAACAGAGTTTCTGCA+AGG | - | chr2.4:52697104-52697123 | None:intergenic | 35.0% | |
| CTATGCTATGATTGGCAATT+TGG | + | chr2.4:52695481-52695500 | MS.gene73340:intron | 35.0% | |
| GACCAAGTAGTCAACATATT+AGG | + | chr2.4:52693911-52693930 | MS.gene73340:intron | 35.0% | |
| GAGATTTGATGTTGACATCT+CGG | + | chr2.4:52694928-52694947 | MS.gene73340:CDS | 35.0% | |
| GATACCTTTGGTTAACGTAA+AGG | - | chr2.4:52692189-52692208 | None:intergenic | 35.0% | |
| GCATAAGTCGTATTGAAGAA+GGG | + | chr2.4:52693739-52693758 | MS.gene73340:intron | 35.0% | |
| GGATAAGAAAGCAAAGTCTA+TGG | + | chr2.4:52697415-52697434 | MS.gene73340:CDS | 35.0% | |
| GGTCTACAACTACAACATAA+AGG | - | chr2.4:52692974-52692993 | None:intergenic | 35.0% | |
| GTGTAGCTAATATGTTTCAC+AGG | + | chr2.4:52696690-52696709 | MS.gene73340:intron | 35.0% | |
| GTTGTGTCAAATCTGAAAGT+TGG | + | chr2.4:52695576-52695595 | MS.gene73340:intron | 35.0% | |
| TAAGCATATGCTTTGTGTAG+AGG | + | chr2.4:52697460-52697479 | MS.gene73340:CDS | 35.0% | |
| TAGAAGGAGGAAGAAGAAAA+AGG | + | chr2.4:52692483-52692502 | MS.gene73340:intron | 35.0% | |
| TATCAAATTTGAGTGGCTGT+TGG | + | chr2.4:52697342-52697361 | MS.gene73340:intron | 35.0% | |
| TATTATCTTGTTCCTTGTGC+AGG | + | chr2.4:52693491-52693510 | MS.gene73340:intron | 35.0% | |
| TATTTGCAGTTTGCAAACCA+TGG | + | chr2.4:52694576-52694595 | MS.gene73340:intron | 35.0% | |
| TCACAGGAATGTAATAAGCT+AGG | - | chr2.4:52693702-52693721 | None:intergenic | 35.0% | |
| TCTTCCTTTACGTTAACCAA+AGG | + | chr2.4:52692182-52692201 | MS.gene73340:CDS | 35.0% | |
| TGACTGTGAAATTTAGAAGG+AGG | + | chr2.4:52692470-52692489 | MS.gene73340:intron | 35.0% | |
| TTAACTCCACTAACTGAGTT+GGG | - | chr2.4:52695814-52695833 | None:intergenic | 35.0% | |
| TTATTTCCCAACTCAGTTAG+TGG | + | chr2.4:52695805-52695824 | MS.gene73340:intron | 35.0% | |
| TTCCATCTAGTTACTGTAGT+GGG | + | chr2.4:52697555-52697574 | MS.gene73340:CDS | 35.0% | |
| TTCGGAACACAAATAGTGAT+GGG | + | chr2.4:52694952-52694971 | MS.gene73340:CDS | 35.0% | |
| TTGAGGGTCTATGTAAGATT+GGG | + | chr2.4:52693985-52694004 | MS.gene73340:intron | 35.0% | |
| TTGTAGATTTATCTGTACGG+TGG | + | chr2.4:52692555-52692574 | MS.gene73340:intron | 35.0% | |
| TTTAACTCCACTAACTGAGT+TGG | - | chr2.4:52695815-52695834 | None:intergenic | 35.0% | |
| ! | AAACTCAAAGCATTATTGCC+GGG | + | chr2.4:52695267-52695286 | MS.gene73340:intron | 35.0% |
| ! | ACACATTCCATTAGAAGTGT+CGG | + | chr2.4:52693219-52693238 | MS.gene73340:intron | 35.0% |
| ! | ACCCTAATATGTTGACTACT+TGG | - | chr2.4:52693916-52693935 | None:intergenic | 35.0% |
| ! | ATTTGCTAGAAATCGGGTTT+GGG | + | chr2.4:52694617-52694636 | MS.gene73340:CDS | 35.0% |
| ! | CAAACTCAAAGCATTATTGC+CGG | + | chr2.4:52695266-52695285 | MS.gene73340:intron | 35.0% |
| ! | CATACTTGTGGAAAGCATAT+TGG | - | chr2.4:52693555-52693574 | None:intergenic | 35.0% |
| ! | GCAATAATGCTTTGAGTTTG+AGG | - | chr2.4:52695266-52695285 | None:intergenic | 35.0% |
| ! | GTGTGGATTTTTGTACATGA+TGG | + | chr2.4:52695619-52695638 | MS.gene73340:intron | 35.0% |
| ! | TATTTGTTGGAAAAGGAGGA+GGG | - | chr2.4:52694656-52694675 | None:intergenic | 35.0% |
| ! | TGGTTGAAATCTAGTTCAAG+AGG | + | chr2.4:52695448-52695467 | MS.gene73340:intron | 35.0% |
| ! | TTATTTGTTGGAAAAGGAGG+AGG | - | chr2.4:52694657-52694676 | None:intergenic | 35.0% |
| !! | ACATGGATTTGCTAGAAATC+GGG | + | chr2.4:52694611-52694630 | MS.gene73340:CDS | 35.0% |
| !! | ACGTTAACCAAAGGTATCAA+TGG | + | chr2.4:52692191-52692210 | MS.gene73340:CDS | 35.0% |
| !! | CACATGGATTTGCTAGAAAT+CGG | + | chr2.4:52694610-52694629 | MS.gene73340:CDS | 35.0% |
| !! | CTATTGGTTTCGTTGTTTCT+TGG | - | chr2.4:52694427-52694446 | None:intergenic | 35.0% |
| !! | TAGATCACGGTTCTAAATTG+TGG | + | chr2.4:52692871-52692890 | MS.gene73340:intron | 35.0% |
| !! | TGTACTGACTATGCTATGAT+TGG | + | chr2.4:52695473-52695492 | MS.gene73340:intron | 35.0% |
| !!! | CATCGCTGTTTAGTTTTAAC+TGG | + | chr2.4:52695065-52695084 | MS.gene73340:intron | 35.0% |
| !!! | TATTGCCGGGGTTTTTTATT+TGG | + | chr2.4:52695280-52695299 | MS.gene73340:intron | 35.0% |
| !!! | TGTTTCTGTTTTGAGATGAG+AGG | + | chr2.4:52693616-52693635 | MS.gene73340:intron | 35.0% |
| AAACCTGGAGAAGAATGGAA+AGG | + | chr2.4:52697512-52697531 | MS.gene73340:CDS | 40.0% | |
| ACCCATGATATCAAAGTTCG+CGG | - | chr2.4:52692897-52692916 | None:intergenic | 40.0% | |
| AGACAGCAGTGAAATCTAGA+AGG | - | chr2.4:52694369-52694388 | None:intergenic | 40.0% | |
| AGGTATCAATGGTCTCGATA+AGG | + | chr2.4:52692202-52692221 | MS.gene73340:CDS | 40.0% | |
| ATCGAGACCATTGATACCTT+TGG | - | chr2.4:52692201-52692220 | None:intergenic | 40.0% | |
| ATGGCAGTTAATCCGGATTA+AGG | + | chr2.4:52693348-52693367 | MS.gene73340:intron | 40.0% | |
| ATTTCCATCACCATGTCATC+TGG | - | chr2.4:52694548-52694567 | None:intergenic | 40.0% | |
| CATGGAAACTTGGAATCACA+TGG | + | chr2.4:52694594-52694613 | MS.gene73340:CDS | 40.0% | |
| CATGTGATTCCAAGTTTCCA+TGG | - | chr2.4:52694596-52694615 | None:intergenic | 40.0% | |
| CTAATCAACATGAAAGCTGG+AGG | - | chr2.4:52693440-52693459 | None:intergenic | 40.0% | |
| CTGAAGAAGACATGAAGATC+TGG | + | chr2.4:52694715-52694734 | MS.gene73340:CDS | 40.0% | |
| CTTCTAATGGAATGTGTGTC+CGG | - | chr2.4:52693216-52693235 | None:intergenic | 40.0% | |
| GACTTTGCTTTCTTATCCCA+AGG | - | chr2.4:52697413-52697432 | None:intergenic | 40.0% | |
| GAGGATGAAGACGACTATAT+TGG | - | chr2.4:52694248-52694267 | None:intergenic | 40.0% | |
| GATCTTCATGTCTTCTTCAG+AGG | - | chr2.4:52694715-52694734 | None:intergenic | 40.0% | |
| GGTTGAAAGATTGAAACTCG+AGG | + | chr2.4:52694012-52694031 | MS.gene73340:intron | 40.0% | |
| GTTAGTGGAGTTAAAGACTG+TGG | + | chr2.4:52695820-52695839 | MS.gene73340:intron | 40.0% | |
| GTTCCATCTAGTTACTGTAG+TGG | + | chr2.4:52697554-52697573 | MS.gene73340:CDS | 40.0% | |
| GTTTGCAAACCATGGAAACT+TGG | + | chr2.4:52694584-52694603 | MS.gene73340:intron | 40.0% | |
| TATAGTCGTCTTCATCCTCT+TGG | + | chr2.4:52694249-52694268 | MS.gene73340:intron | 40.0% | |
| TCTTGACAACTTGCAGAACA+AGG | + | chr2.4:52696018-52696037 | MS.gene73340:CDS | 40.0% | |
| TGATGTTGACATCTCGGATT+CGG | + | chr2.4:52694934-52694953 | MS.gene73340:CDS | 40.0% | |
| TGCATGTGTTCAGTGAAGTT+CGG | + | chr2.4:52695969-52695988 | MS.gene73340:intron | 40.0% | |
| TGCCACCAAATAAAAAACCC+CGG | - | chr2.4:52695288-52695307 | None:intergenic | 40.0% | |
| TGCTTCAATGGCAGTTAATC+CGG | + | chr2.4:52693341-52693360 | MS.gene73340:intron | 40.0% | |
| TGGCAGTTAATCCGGATTAA+GGG | + | chr2.4:52693349-52693368 | MS.gene73340:intron | 40.0% | |
| TGTAGAACCGACACTTCTAA+TGG | - | chr2.4:52693229-52693248 | None:intergenic | 40.0% | |
| TGTCAACATCAAATCTCCTC+CGG | - | chr2.4:52694925-52694944 | None:intergenic | 40.0% | |
| TTATCTTGGTTTCCTCTGTG+CGG | - | chr2.4:52694321-52694340 | None:intergenic | 40.0% | |
| TTCTAGATTCCGATCTGGTT+AGG | + | chr2.4:52692349-52692368 | MS.gene73340:intron | 40.0% | |
| ! | AAAGTCTATGGCTGATTTCG+GGG | + | chr2.4:52697427-52697446 | MS.gene73340:CDS | 40.0% |
| ! | AACTCAAAGCATTATTGCCG+GGG | + | chr2.4:52695268-52695287 | MS.gene73340:intron | 40.0% |
| ! | ACATGAAGATCTGGAATCAC+AGG | + | chr2.4:52694724-52694743 | MS.gene73340:CDS | 40.0% |
| ! | CAAAGTCTATGGCTGATTTC+GGG | + | chr2.4:52697426-52697445 | MS.gene73340:CDS | 40.0% |
| ! | GCAAAGTCTATGGCTGATTT+CGG | + | chr2.4:52697425-52697444 | MS.gene73340:CDS | 40.0% |
| ! | TTCATACCAAAAGTGTGCAC+TGG | + | chr2.4:52696323-52696342 | MS.gene73340:intron | 40.0% |
| !! | AAGGCTATCACTTTGAAACC+TGG | + | chr2.4:52697497-52697516 | MS.gene73340:CDS | 40.0% |
| !! | AGTTTCAGGTTAAGAGATGC+TGG | + | chr2.4:52696111-52696130 | MS.gene73340:intron | 40.0% |
| !! | CTTTGAAACCTGGAGAAGAA+TGG | + | chr2.4:52697507-52697526 | MS.gene73340:CDS | 40.0% |
| !! | GATTTGCTAGAAATCGGGTT+TGG | + | chr2.4:52694616-52694635 | MS.gene73340:CDS | 40.0% |
| !! | GGCTTTAAGTGGTCCTTATT+TGG | + | chr2.4:52695382-52695401 | MS.gene73340:intron | 40.0% |
| !! | TATAGCTCAAGGGCTTTAAG+TGG | + | chr2.4:52695371-52695390 | MS.gene73340:intron | 40.0% |
| !!! | ATACACTTTTTCCCTGTTGG+TGG | - | chr2.4:52694061-52694080 | None:intergenic | 40.0% |
| !!! | CACATACACTTTTTCCCTGT+TGG | - | chr2.4:52694064-52694083 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTATTTGGTGGCA+CGG | + | chr2.4:52695288-52695307 | MS.gene73340:intron | 40.0% |
| !!! | GGTTTTTTATTTGGTGGCAC+GGG | + | chr2.4:52695289-52695308 | MS.gene73340:intron | 40.0% |
| !!! | GTTTTGAGATGAGAGGTGAA+CGG | + | chr2.4:52693623-52693642 | MS.gene73340:intron | 40.0% |
| !!! | TACACTTTTTCCCTGTTGGT+GGG | - | chr2.4:52694060-52694079 | None:intergenic | 40.0% |
| !!! | TAGTTTTGAGTACCGTCTGA+GGG | + | chr2.4:52694887-52694906 | MS.gene73340:intron | 40.0% |
| AAGTACAACTGCCCACATGA+AGG | - | chr2.4:52695548-52695567 | None:intergenic | 45.0% | |
| AAGTCGTATTGAAGAAGGGG+TGG | + | chr2.4:52693743-52693762 | MS.gene73340:intron | 45.0% | |
| ACCAATGCCCAGATATGAAG+TGG | - | chr2.4:52696547-52696566 | None:intergenic | 45.0% | |
| AGGGTCTATGTAAGATTGGG+AGG | + | chr2.4:52693988-52694007 | MS.gene73340:intron | 45.0% | |
| AGTCGTATTGAAGAAGGGGT+GGG | + | chr2.4:52693744-52693763 | MS.gene73340:intron | 45.0% | |
| AGTGAGCTGCTCTCTTTGTA+GGG | - | chr2.4:52693834-52693853 | None:intergenic | 45.0% | |
| ATCGTAAGATCCCACCAACA+GGG | + | chr2.4:52694047-52694066 | MS.gene73340:intron | 45.0% | |
| ATGCCACCCACTTCATATCT+GGG | + | chr2.4:52696537-52696556 | MS.gene73340:intron | 45.0% | |
| CCAATGCCCAGATATGAAGT+GGG | - | chr2.4:52696546-52696565 | None:intergenic | 45.0% | |
| CGGTTACGATTATACCTCAG+CGG | - | chr2.4:52692255-52692274 | None:intergenic | 45.0% | |
| CTTCCTTTCCATTCTTCTCC+AGG | - | chr2.4:52697518-52697537 | None:intergenic | 45.0% | |
| GAAACTCGAGGATTGTAGCA+CGG | + | chr2.4:52694024-52694043 | MS.gene73340:intron | 45.0% | |
| GCATGTGTTCAGTGAAGTTC+GGG | + | chr2.4:52695970-52695989 | MS.gene73340:intron | 45.0% | |
| GCCGCGAACTTTGATATCAT+GGG | + | chr2.4:52692893-52692912 | MS.gene73340:intron | 45.0% | |
| GCTTAAAGATAGCCTGCACA+AGG | - | chr2.4:52693506-52693525 | None:intergenic | 45.0% | |
| GGCTATCTTTAAGCCTCCTA+AGG | + | chr2.4:52693512-52693531 | MS.gene73340:intron | 45.0% | |
| GGGTCTATGTAAGATTGGGA+GGG | + | chr2.4:52693989-52694008 | MS.gene73340:intron | 45.0% | |
| GGTATCAACCAGCGCATATT+GGG | - | chr2.4:52696517-52696536 | None:intergenic | 45.0% | |
| GGTCTATGTAAGATTGGGAG+GGG | + | chr2.4:52693990-52694009 | MS.gene73340:intron | 45.0% | |
| GTCAACATCAAATCTCCTCC+GGG | - | chr2.4:52694924-52694943 | None:intergenic | 45.0% | |
| GTCTATGTAAGATTGGGAGG+GGG | + | chr2.4:52693991-52694010 | MS.gene73340:intron | 45.0% | |
| GTGGAAGAATGATCATGCTG+AGG | + | chr2.4:52692590-52692609 | MS.gene73340:CDS | 45.0% | |
| GTTCTTCTTCGTGAATCTCG+TGG | + | chr2.4:52692224-52692243 | MS.gene73340:CDS | 45.0% | |
| TCATCACACTCCAGATGACA+TGG | + | chr2.4:52694535-52694554 | MS.gene73340:intron | 45.0% | |
| TCCTCTGTTTCACTTCCAAG+AGG | - | chr2.4:52694267-52694286 | None:intergenic | 45.0% | |
| TCCTCTTGGAAGTGAAACAG+AGG | + | chr2.4:52694263-52694282 | MS.gene73340:intron | 45.0% | |
| TGCCCACTACAGTAACTAGA+TGG | - | chr2.4:52697560-52697579 | None:intergenic | 45.0% | |
| TGGTATCAACCAGCGCATAT+TGG | - | chr2.4:52696518-52696537 | None:intergenic | 45.0% | |
| TGGTGAAAGTAGCCTAACCA+TGG | - | chr2.4:52695148-52695167 | None:intergenic | 45.0% | |
| TTCAGTGAAGTTCGGGTAGA+GGG | + | chr2.4:52695977-52695996 | MS.gene73340:intron | 45.0% | |
| ! | GTTTAGATAGAGCGCCTAAC+TGG | + | chr2.4:52695940-52695959 | MS.gene73340:intron | 45.0% |
| ! | TAGCAACCAGTGCACACTTT+TGG | - | chr2.4:52696332-52696351 | None:intergenic | 45.0% |
| !! | AAGGAGCGCTTTACTGAACA+GGG | + | chr2.4:52696037-52696056 | MS.gene73340:CDS | 45.0% |
| !! | AGATAGTACTGACCAGCATC+AGG | - | chr2.4:52696883-52696902 | None:intergenic | 45.0% |
| !! | TATGTATCGGTGTCAAACGC+CGG | + | chr2.4:52693194-52693213 | MS.gene73340:intron | 45.0% |
| !!! | GTAGTTTTGAGTACCGTCTG+AGG | + | chr2.4:52694886-52694905 | MS.gene73340:intron | 45.0% |
| !!! | TCACTGCCGTTTTGAGAACT+GGG | + | chr2.4:52693849-52693868 | MS.gene73340:intron | 45.0% |
| !!! | TGCCGGGGTTTTTTATTTGG+TGG | + | chr2.4:52695283-52695302 | MS.gene73340:intron | 45.0% |
| AAAGATGGCCTTCCTGATGC+TGG | + | chr2.4:52696868-52696887 | MS.gene73340:CDS | 50.0% | |
| AAGCCTCCTAAGGCTATTCG+TGG | + | chr2.4:52693522-52693541 | MS.gene73340:CDS | 50.0% | |
| ACCAGTGGTGTGGAATCCTT+GGG | + | chr2.4:52697394-52697413 | MS.gene73340:intron | 50.0% | |
| AGAGATAAAGCCGACAGTGG+GGG | - | chr2.4:52696406-52696425 | None:intergenic | 50.0% | |
| AGGAGAGATAAAGCCGACAG+TGG | - | chr2.4:52696409-52696428 | None:intergenic | 50.0% | |
| AGGAGGAGGGTCATCTTCAA+TGG | - | chr2.4:52694643-52694662 | None:intergenic | 50.0% | |
| ATCCCTCCACGAATAGCCTT+AGG | - | chr2.4:52693531-52693550 | None:intergenic | 50.0% | |
| ATCCTATACTCCCCCACTGT+CGG | + | chr2.4:52696393-52696412 | MS.gene73340:intron | 50.0% | |
| ATGCCCAGATATGAAGTGGG+TGG | - | chr2.4:52696543-52696562 | None:intergenic | 50.0% | |
| CACTCCAGATGACATGGTGA+TGG | + | chr2.4:52694541-52694560 | MS.gene73340:intron | 50.0% | |
| CACTCGAACATCCCCAATCA+AGG | - | chr2.4:52697171-52697190 | None:intergenic | 50.0% | |
| CAGATATGAAGTGGGTGGCA+TGG | - | chr2.4:52696538-52696557 | None:intergenic | 50.0% | |
| CAGTGAGCTGCTCTCTTTGT+AGG | - | chr2.4:52693835-52693854 | None:intergenic | 50.0% | |
| CATGCCACCCACTTCATATC+TGG | + | chr2.4:52696536-52696555 | MS.gene73340:intron | 50.0% | |
| CCCACTTCATATCTGGGCAT+TGG | + | chr2.4:52696543-52696562 | MS.gene73340:intron | 50.0% | |
| CTCCTAAGGCTATTCGTGGA+GGG | + | chr2.4:52693526-52693545 | MS.gene73340:CDS | 50.0% | |
| GAGAGATAAAGCCGACAGTG+GGG | - | chr2.4:52696407-52696426 | None:intergenic | 50.0% | |
| GATCCCCAGAGAGTTCTTCA+GGG | + | chr2.4:52697584-52697603 | MS.gene73340:CDS | 50.0% | |
| GATCGTAAGATCCCACCAAC+AGG | + | chr2.4:52694046-52694065 | MS.gene73340:intron | 50.0% | |
| GGAGAGATAAAGCCGACAGT+GGG | - | chr2.4:52696408-52696427 | None:intergenic | 50.0% | |
| GGCCGCGAACTTTGATATCA+TGG | + | chr2.4:52692892-52692911 | MS.gene73340:intron | 50.0% | |
| GGTAGAGGGATTAGAGACCT+TGG | + | chr2.4:52695991-52696010 | MS.gene73340:CDS | 50.0% | |
| GTCGTATTGAAGAAGGGGTG+GGG | + | chr2.4:52693745-52693764 | MS.gene73340:intron | 50.0% | |
| GTTCAGTGAAGTTCGGGTAG+AGG | + | chr2.4:52695976-52695995 | MS.gene73340:intron | 50.0% | |
| TACCAGTGGTGTGGAATCCT+TGG | + | chr2.4:52697393-52697412 | MS.gene73340:intron | 50.0% | |
| TACCGTCTGAGGGTAGCTTT+GGG | + | chr2.4:52694897-52694916 | MS.gene73340:CDS | 50.0% | |
| TCGTATTGAAGAAGGGGTGG+GGG | + | chr2.4:52693746-52693765 | MS.gene73340:intron | 50.0% | |
| TGATCCCCAGAGAGTTCTTC+AGG | + | chr2.4:52697583-52697602 | MS.gene73340:CDS | 50.0% | |
| ! | GTACATGATGGTGCAGAGTG+TGG | + | chr2.4:52695631-52695650 | MS.gene73340:intron | 50.0% |
| !! | AGTACTGACCAGCATCAGGA+AGG | - | chr2.4:52696879-52696898 | None:intergenic | 50.0% |
| !! | CAAGGAGCGCTTTACTGAAC+AGG | + | chr2.4:52696036-52696055 | MS.gene73340:CDS | 50.0% |
| !!! | CTCACTGCCGTTTTGAGAAC+TGG | + | chr2.4:52693848-52693867 | MS.gene73340:intron | 50.0% |
| ACGGTGGACATGTGACTTCG+TGG | + | chr2.4:52692571-52692590 | MS.gene73340:CDS | 55.0% | |
| AGCTGCCCTGAAGAACTCTC+TGG | - | chr2.4:52697592-52697611 | None:intergenic | 55.0% | |
| ATTGAAGAAGGGGTGGGGGT+GGG | + | chr2.4:52693750-52693769 | MS.gene73340:intron | 55.0% | |
| CAACCAGCGCATATTGGGCA+AGG | - | chr2.4:52696512-52696531 | None:intergenic | 55.0% | |
| CCTCCTAAGGCTATTCGTGG+AGG | + | chr2.4:52693525-52693544 | MS.gene73340:CDS | 55.0% | |
| CTGCCCTGAAGAACTCTCTG+GGG | - | chr2.4:52697590-52697609 | None:intergenic | 55.0% | |
| GCTGCCCTGAAGAACTCTCT+GGG | - | chr2.4:52697591-52697610 | None:intergenic | 55.0% | |
| GGGGATGTTCGAGTGAGCTT+GGG | + | chr2.4:52697176-52697195 | MS.gene73340:intron | 55.0% | |
| GTACCGTCTGAGGGTAGCTT+TGG | + | chr2.4:52694896-52694915 | MS.gene73340:CDS | 55.0% | |
| GTCCCAAAGCTACCCTCAGA+CGG | - | chr2.4:52694902-52694921 | None:intergenic | 55.0% | |
| TATTGAAGAAGGGGTGGGGG+TGG | + | chr2.4:52693749-52693768 | MS.gene73340:intron | 55.0% | |
| TCCCAAGGATTCCACACCAC+TGG | - | chr2.4:52697398-52697417 | None:intergenic | 55.0% | |
| TGGGGATGTTCGAGTGAGCT+TGG | + | chr2.4:52697175-52697194 | MS.gene73340:intron | 55.0% | |
| ! | CCTCCACGAATAGCCTTAGG+AGG | - | chr2.4:52693528-52693547 | None:intergenic | 55.0% |
| ! | GACAGTGGGGGAGTATAGGA+TGG | - | chr2.4:52696394-52696413 | None:intergenic | 55.0% |
| AGGCCTTGCCCAATATGCGC+TGG | + | chr2.4:52696506-52696525 | MS.gene73340:intron | 60.0% | |
| TTGGTTTCCTCTGTGCGGCG+CGG | - | chr2.4:52694316-52694335 | None:intergenic | 60.0% | |
| ! | AGCCGACAGTGGGGGAGTAT+AGG | - | chr2.4:52696398-52696417 | None:intergenic | 60.0% |
| !! | CTGAGGGTAGCTTTGGGACC+CGG | + | chr2.4:52694903-52694922 | MS.gene73340:CDS | 60.0% |
| ATCTCGTGGCGCTTCCGCTG+AGG | + | chr2.4:52692238-52692257 | MS.gene73340:CDS | 65.0% | |
| ! | AAGGGGTGGGGGTGGGTTCA+GGG | + | chr2.4:52693757-52693776 | MS.gene73340:intron | 65.0% |
| !! | AGGGTAGCTTTGGGACCCGG+AGG | + | chr2.4:52694906-52694925 | MS.gene73340:CDS | 65.0% |
| GTTTCCTCTGTGCGGCGCGG+TGG | - | chr2.4:52694313-52694332 | None:intergenic | 70.0% | |
| ! | GAAGGGGTGGGGGTGGGTTC+AGG | + | chr2.4:52693756-52693775 | MS.gene73340:intron | 70.0% |
| GGAACCACCGCGCCGCACAG+AGG | + | chr2.4:52694306-52694325 | MS.gene73340:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 52692149 | 52697613 | 52692149 | ID=MS.gene73340 |
| chr2.4 | mRNA | 52692149 | 52697613 | 52692149 | ID=MS.gene73340.t1;Parent=MS.gene73340 |
| chr2.4 | exon | 52692149 | 52692259 | 52692149 | ID=MS.gene73340.t1.exon1;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52692149 | 52692259 | 52692149 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52692561 | 52692635 | 52692561 | ID=MS.gene73340.t1.exon2;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52692561 | 52692635 | 52692561 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52693513 | 52693569 | 52693513 | ID=MS.gene73340.t1.exon3;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52693513 | 52693569 | 52693513 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52694585 | 52694745 | 52694585 | ID=MS.gene73340.t1.exon4;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52694585 | 52694745 | 52694585 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52694890 | 52695030 | 52694890 | ID=MS.gene73340.t1.exon5;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52694890 | 52695030 | 52694890 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52695982 | 52696084 | 52695982 | ID=MS.gene73340.t1.exon6;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52695982 | 52696084 | 52695982 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52696790 | 52696889 | 52696790 | ID=MS.gene73340.t1.exon7;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52696790 | 52696889 | 52696790 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| chr2.4 | exon | 52697399 | 52697613 | 52697399 | ID=MS.gene73340.t1.exon8;Parent=MS.gene73340.t1 |
| chr2.4 | CDS | 52697399 | 52697613 | 52697399 | ID=cds.MS.gene73340.t1;Parent=MS.gene73340.t1 |
| Gene Sequence |
| Protein sequence |
