Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73638.t1 | RHN60424.1 | 92.9 | 212 | 15 | 0 | 1 | 212 | 1 | 212 | 1.20E-105 | 392.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73638.t1 | A0A396I855 | 92.9 | 212 | 15 | 0 | 1 | 212 | 1 | 212 | 8.9e-106 | 392.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene73638 | 0.808737 | 2.67E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene73638 | 0.851243 | 1.01E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene73638 | 0.825688 | 4.09E-54 | -1.69E-46 |
| MS.gene049452 | MS.gene73638 | 0.819321 | 1.24E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene73638 | 0.800145 | 1.65E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene73638 | 0.828136 | 1.06E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene73638 | 0.821661 | 3.59E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene73638 | 0.822735 | 2.02E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene73638 | 0.814025 | 1.90E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene73638 | 0.8585 | 7.90E-63 | -1.69E-46 |
| MS.gene050962 | MS.gene73638 | 0.844806 | 6.02E-59 | -1.69E-46 |
| MS.gene051198 | MS.gene73638 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene73638 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene73638 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene73638 | 0.806843 | 6.76E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene73638 | 0.817249 | 3.64E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene73638 | 0.808135 | 3.59E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene73638 | 0.82093 | 5.29E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene73638 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene73638 | 0.817181 | 3.77E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene73638 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene73638 | 0.814101 | 1.83E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene73638 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene73638 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene73638 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene73638 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene73638 | 0.80322 | 3.87E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene73638 | 0.804846 | 1.78E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene73638 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene73638 | 0.852554 | 4.28E-61 | -1.69E-46 |
| MS.gene054775 | MS.gene73638 | 0.80127 | 9.75E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene73638 | 0.812047 | 5.16E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene73638 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene73638 | 0.802664 | 5.04E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene73638 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene73638 | 0.823588 | 1.28E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene73638 | 0.803534 | 3.33E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene73638 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene73638 | 0.810824 | 9.51E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene73638 | 0.809541 | 1.80E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene73638 | 0.800238 | 1.58E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene73638 | 0.825381 | 4.83E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene73638 | 0.843902 | 1.05E-58 | -1.69E-46 |
| MS.gene057869 | MS.gene73638 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene73638 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene73638 | 0.801088 | 1.06E-48 | -1.69E-46 |
| MS.gene058009 | MS.gene73638 | 0.829041 | 6.43E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene73638 | 0.830185 | 3.39E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene73638 | 0.819191 | 1.32E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene73638 | 0.831721 | 1.42E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene73638 | 0.804086 | 2.56E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene73638 | 0.817944 | 2.53E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene73638 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene059842 | MS.gene73638 | 0.810957 | 8.90E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene73638 | 0.826154 | 3.17E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene73638 | 0.801912 | 7.20E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene73638 | 0.825417 | 4.74E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene73638 | 0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene73638 | 0.813239 | 2.83E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73638.t1 | MTR_4g051652 | 92.857 | 210 | 15 | 0 | 3 | 212 | 1 | 210 | 1.04e-144 | 402 |
| MS.gene73638.t1 | MTR_2g087080 | 53.846 | 208 | 90 | 3 | 5 | 206 | 4 | 211 | 6.07e-69 | 210 |
| MS.gene73638.t1 | MTR_4g051672 | 54.930 | 213 | 23 | 5 | 3 | 212 | 1 | 143 | 6.08e-64 | 195 |
| MS.gene73638.t1 | MTR_4g051705 | 89.888 | 89 | 9 | 0 | 124 | 212 | 1 | 89 | 5.86e-54 | 167 |
| MS.gene73638.t1 | MTR_4g051745 | 82.022 | 89 | 4 | 1 | 124 | 212 | 1 | 77 | 5.67e-45 | 144 |
| MS.gene73638.t1 | MTR_2g087000 | 27.136 | 199 | 138 | 3 | 9 | 207 | 39 | 230 | 2.14e-22 | 91.3 |
| MS.gene73638.t1 | MTR_2g011350 | 27.273 | 154 | 108 | 3 | 41 | 193 | 41 | 191 | 1.32e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73638.t1 | AT3G52460 | 29.897 | 194 | 125 | 4 | 14 | 199 | 99 | 289 | 1.92e-17 | 79.3 |
| MS.gene73638.t1 | AT5G22870 | 25.389 | 193 | 133 | 6 | 3 | 187 | 1 | 190 | 1.83e-11 | 61.6 |
| MS.gene73638.t1 | AT2G27260 | 27.329 | 161 | 112 | 4 | 46 | 205 | 84 | 240 | 3.41e-11 | 61.2 |
Find 53 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGATGTGGAGATACTTTA+CGG | 0.300931 | 4.1:-46456763 | MS.gene73638:CDS |
| AAAAGACACTGGAAAACTAT+TGG | 0.316716 | 4.1:-46456467 | MS.gene73638:CDS |
| TTCAATAACTAACTATGGTT+TGG | 0.319426 | 4.1:+46456414 | None:intergenic |
| TTGGATTTGAAGCTGGAATA+TGG | 0.322794 | 4.1:-46456552 | MS.gene73638:CDS |
| CTGGAAAACTATTGGGTATT+GGG | 0.345902 | 4.1:-46456459 | MS.gene73638:CDS |
| ATGTGTTTCTTGTGGGGACT+TGG | 0.423348 | 4.1:-46456509 | MS.gene73638:CDS |
| ACTGGAAAACTATTGGGTAT+TGG | 0.428456 | 4.1:-46456460 | MS.gene73638:CDS |
| AAAGACACTGGAAAACTATT+GGG | 0.440360 | 4.1:-46456466 | MS.gene73638:CDS |
| GGTGCAACAACCTATACTTT+TGG | 0.440362 | 4.1:-46456716 | MS.gene73638:CDS |
| TGGCCATCATTGGCATAGCT+TGG | 0.441176 | 4.1:-46456936 | MS.gene73638:CDS |
| CTTCCGACACCGGCTTTGTC+CGG | 0.445859 | 4.1:-46456999 | MS.gene73638:CDS |
| TTCTTGTGGGGACTTGGATG+TGG | 0.458190 | 4.1:-46456503 | MS.gene73638:CDS |
| GTTAGAGTTGGATTTGAAGC+TGG | 0.458770 | 4.1:-46456559 | MS.gene73638:CDS |
| CTCATCTTCACCAAAAGTAT+AGG | 0.463962 | 4.1:+46456706 | None:intergenic |
| GTGAAGATGGTTGTTAGAGT+TGG | 0.466909 | 4.1:-46456571 | MS.gene73638:CDS |
| ACAGATTACAGGCGTGTTCG+AGG | 0.475631 | 4.1:-46456839 | MS.gene73638:CDS |
| AGTGATGTTACCGCAAAACT+AGG | 0.482969 | 4.1:+46456892 | None:intergenic |
| GTTGGGATATTTCTAGTAGG+AGG | 0.485932 | 4.1:+46457027 | None:intergenic |
| CAAGAGTATGAAGGTTGACT+TGG | 0.487527 | 4.1:-46456680 | MS.gene73638:CDS |
| CGGTGTCGGAAGATCTTGTT+GGG | 0.487634 | 4.1:+46457010 | None:intergenic |
| AAGACATTATGTGTTTCTTG+TGG | 0.490786 | 4.1:-46456517 | MS.gene73638:CDS |
| TTGGGATATTTCTAGTAGGA+GGG | 0.498040 | 4.1:+46457028 | None:intergenic |
| CTTGTTGGGATATTTCTAGT+AGG | 0.499013 | 4.1:+46457024 | None:intergenic |
| CACCTCAGCTTCCGAGAGCA+CGG | 0.502696 | 4.1:+46456735 | None:intergenic |
| AGACATTATGTGTTTCTTGT+GGG | 0.505280 | 4.1:-46456516 | MS.gene73638:CDS |
| TTACGGTGAAACCGTGCTCT+CGG | 0.510617 | 4.1:-46456746 | MS.gene73638:CDS |
| GTATTCGATTCACAGATTAC+AGG | 0.518278 | 4.1:-46456850 | MS.gene73638:CDS |
| TAGTTGCGGAGTGGAACAAA+GGG | 0.526316 | 4.1:-46456609 | MS.gene73638:CDS |
| CCGGTGTCGGAAGATCTTGT+TGG | 0.532501 | 4.1:+46457009 | None:intergenic |
| AAACCAAGCTATGCCAATGA+TGG | 0.532510 | 4.1:+46456933 | None:intergenic |
| ATTACAGGCGTGTTCGAGGC+GGG | 0.548697 | 4.1:-46456835 | MS.gene73638:CDS |
| GACATTATGTGTTTCTTGTG+GGG | 0.561691 | 4.1:-46456515 | MS.gene73638:CDS |
| GGTTAGACGCCGGACAAAGC+CGG | 0.562191 | 4.1:+46456990 | None:intergenic |
| TTCAACGAAGTTCTTGCAGA+AGG | 0.562601 | 4.1:-46456647 | MS.gene73638:CDS |
| TTCTATTCTACAAAAGACAC+TGG | 0.567750 | 4.1:-46456478 | MS.gene73638:CDS |
| ACGCCGGACAAAGCCGGTGT+CGG | 0.579838 | 4.1:+46456996 | None:intergenic |
| CTAGTTGCGGAGTGGAACAA+AGG | 0.586760 | 4.1:-46456610 | MS.gene73638:CDS |
| GATGAGCAACAAGAGTATGA+AGG | 0.586934 | 4.1:-46456689 | MS.gene73638:CDS |
| AACCGTGCTCTCGGAAGCTG+AGG | 0.589161 | 4.1:-46456737 | MS.gene73638:CDS |
| AGCTGGAATATGGCCAAGCA+AGG | 0.592271 | 4.1:-46456542 | MS.gene73638:CDS |
| GTGATGTTACCGCAAAACTA+GGG | 0.599545 | 4.1:+46456893 | None:intergenic |
| AACGAAGTTCTTGCAGAAGG+CGG | 0.601484 | 4.1:-46456644 | MS.gene73638:CDS |
| AAAGATTGATACAACTGTCA+AGG | 0.607863 | 4.1:+46456969 | None:intergenic |
| CCAACAAGATCTTCCGACAC+CGG | 0.612704 | 4.1:-46457009 | MS.gene73638:CDS |
| AAAATCCAAAGTAATGAACA+TGG | 0.633536 | 4.1:-46457055 | None:intergenic |
| ACCGCAAAACTAGGGTCGTG+TGG | 0.643655 | 4.1:+46456901 | None:intergenic |
| GGTTCTCGATAATTTCGATG+TGG | 0.655826 | 4.1:-46456776 | MS.gene73638:CDS |
| TGCGGAGTGGAACAAAGGGG+TGG | 0.672319 | 4.1:-46456605 | MS.gene73638:CDS |
| GGTGCAAGAGAATCTAGTTG+CGG | 0.677413 | 4.1:-46456623 | MS.gene73638:CDS |
| GATTACAGGCGTGTTCGAGG+CGG | 0.683167 | 4.1:-46456836 | MS.gene73638:CDS |
| AAGAGAATCTAGTTGCGGAG+TGG | 0.723007 | 4.1:-46456618 | MS.gene73638:CDS |
| CAACTGTCAAGGTTAGACGC+CGG | 0.742495 | 4.1:+46456980 | None:intergenic |
| AGTTGCGGAGTGGAACAAAG+GGG | 0.746823 | 4.1:-46456608 | MS.gene73638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTTTGGTTTGTTA+TGG | + | chr4.1:46456664-46456683 | None:intergenic | 20.0% |
| ! | CCAAAACAAAAAAATCGAAT+TGG | - | chr4.1:46456671-46456690 | MS.gene73638:CDS | 25.0% |
| !!! | ATCAATCTTTGTCATTTTCA+TGG | - | chr4.1:46456512-46456531 | MS.gene73638:CDS | 25.0% |
| !!! | CCAATTCGATTTTTTTGTTT+TGG | + | chr4.1:46456674-46456693 | None:intergenic | 25.0% |
| AAAAGACACTGGAAAACTAT+TGG | - | chr4.1:46457001-46457020 | MS.gene73638:CDS | 30.0% | |
| AAAGACACTGGAAAACTATT+GGG | - | chr4.1:46457002-46457021 | MS.gene73638:CDS | 30.0% | |
| AAAGATTGATACAACTGTCA+AGG | + | chr4.1:46456502-46456521 | None:intergenic | 30.0% | |
| AAGACATTATGTGTTTCTTG+TGG | - | chr4.1:46456951-46456970 | MS.gene73638:CDS | 30.0% | |
| AGACATTATGTGTTTCTTGT+GGG | - | chr4.1:46456952-46456971 | MS.gene73638:CDS | 30.0% | |
| TTCTATTCTACAAAAGACAC+TGG | - | chr4.1:46456990-46457009 | MS.gene73638:CDS | 30.0% | |
| ACTGGAAAACTATTGGGTAT+TGG | - | chr4.1:46457008-46457027 | MS.gene73638:CDS | 35.0% | |
| CTGGAAAACTATTGGGTATT+GGG | - | chr4.1:46457009-46457028 | MS.gene73638:CDS | 35.0% | |
| GACATTATGTGTTTCTTGTG+GGG | - | chr4.1:46456953-46456972 | MS.gene73638:CDS | 35.0% | |
| GTATTCGATTCACAGATTAC+AGG | - | chr4.1:46456618-46456637 | MS.gene73638:CDS | 35.0% | |
| TTCGATGTGGAGATACTTTA+CGG | - | chr4.1:46456705-46456724 | MS.gene73638:CDS | 35.0% | |
| ! | CATAATGTCTTTTCCTTGCT+TGG | + | chr4.1:46456942-46456961 | None:intergenic | 35.0% |
| ! | CTCATCTTCACCAAAAGTAT+AGG | + | chr4.1:46456765-46456784 | None:intergenic | 35.0% |
| ! | TTGGATTTGAAGCTGGAATA+TGG | - | chr4.1:46456916-46456935 | MS.gene73638:CDS | 35.0% |
| !! | CTTGTTGGGATATTTCTAGT+AGG | + | chr4.1:46456447-46456466 | None:intergenic | 35.0% |
| !! | GGTGAATTTTGATGTGAAGA+TGG | - | chr4.1:46456884-46456903 | MS.gene73638:CDS | 35.0% |
| !! | TTGGGATATTTCTAGTAGGA+GGG | + | chr4.1:46456443-46456462 | None:intergenic | 35.0% |
| AAACCAAGCTATGCCAATGA+TGG | + | chr4.1:46456538-46456557 | None:intergenic | 40.0% | |
| AGTGATGTTACCGCAAAACT+AGG | + | chr4.1:46456579-46456598 | None:intergenic | 40.0% | |
| GGTTCTCGATAATTTCGATG+TGG | - | chr4.1:46456692-46456711 | MS.gene73638:CDS | 40.0% | |
| GTGAAGATGGTTGTTAGAGT+TGG | - | chr4.1:46456897-46456916 | MS.gene73638:CDS | 40.0% | |
| GTGATGTTACCGCAAAACTA+GGG | + | chr4.1:46456578-46456597 | None:intergenic | 40.0% | |
| TTCAACGAAGTTCTTGCAGA+AGG | - | chr4.1:46456821-46456840 | MS.gene73638:CDS | 40.0% | |
| ! | CAAGAGTATGAAGGTTGACT+TGG | - | chr4.1:46456788-46456807 | MS.gene73638:CDS | 40.0% |
| ! | GATGAGCAACAAGAGTATGA+AGG | - | chr4.1:46456779-46456798 | MS.gene73638:CDS | 40.0% |
| ! | GGTGCAACAACCTATACTTT+TGG | - | chr4.1:46456752-46456771 | MS.gene73638:CDS | 40.0% |
| ! | GTTAGAGTTGGATTTGAAGC+TGG | - | chr4.1:46456909-46456928 | MS.gene73638:CDS | 40.0% |
| !! | GTCATTTTCATGGCCATCAT+TGG | - | chr4.1:46456522-46456541 | MS.gene73638:CDS | 40.0% |
| !! | GTTGGGATATTTCTAGTAGG+AGG | + | chr4.1:46456444-46456463 | None:intergenic | 40.0% |
| AACGAAGTTCTTGCAGAAGG+CGG | - | chr4.1:46456824-46456843 | MS.gene73638:CDS | 45.0% | |
| AAGAGAATCTAGTTGCGGAG+TGG | - | chr4.1:46456850-46456869 | MS.gene73638:CDS | 45.0% | |
| ATGTGTTTCTTGTGGGGACT+TGG | - | chr4.1:46456959-46456978 | MS.gene73638:CDS | 45.0% | |
| GGTGCAAGAGAATCTAGTTG+CGG | - | chr4.1:46456845-46456864 | MS.gene73638:CDS | 45.0% | |
| TAGTTGCGGAGTGGAACAAA+GGG | - | chr4.1:46456859-46456878 | MS.gene73638:CDS | 45.0% | |
| ACAGATTACAGGCGTGTTCG+AGG | - | chr4.1:46456629-46456648 | MS.gene73638:CDS | 50.0% | |
| AGCTGGAATATGGCCAAGCA+AGG | - | chr4.1:46456926-46456945 | MS.gene73638:CDS | 50.0% | |
| AGTTGCGGAGTGGAACAAAG+GGG | - | chr4.1:46456860-46456879 | MS.gene73638:CDS | 50.0% | |
| CAACTGTCAAGGTTAGACGC+CGG | + | chr4.1:46456491-46456510 | None:intergenic | 50.0% | |
| CCAACAAGATCTTCCGACAC+CGG | - | chr4.1:46456459-46456478 | MS.gene73638:CDS | 50.0% | |
| CTAGTTGCGGAGTGGAACAA+AGG | - | chr4.1:46456858-46456877 | MS.gene73638:CDS | 50.0% | |
| TGGCCATCATTGGCATAGCT+TGG | - | chr4.1:46456532-46456551 | MS.gene73638:CDS | 50.0% | |
| TTACGGTGAAACCGTGCTCT+CGG | - | chr4.1:46456722-46456741 | MS.gene73638:CDS | 50.0% | |
| TTCTTGTGGGGACTTGGATG+TGG | - | chr4.1:46456965-46456984 | MS.gene73638:CDS | 50.0% | |
| ! | CGGTGTCGGAAGATCTTGTT+GGG | + | chr4.1:46456461-46456480 | None:intergenic | 50.0% |
| !!! | TCCACACGACCCTAGTTTTG+CGG | - | chr4.1:46456566-46456585 | MS.gene73638:CDS | 50.0% |
| ACCGCAAAACTAGGGTCGTG+TGG | + | chr4.1:46456570-46456589 | None:intergenic | 55.0% | |
| ATTACAGGCGTGTTCGAGGC+GGG | - | chr4.1:46456633-46456652 | MS.gene73638:CDS | 55.0% | |
| GATTACAGGCGTGTTCGAGG+CGG | - | chr4.1:46456632-46456651 | MS.gene73638:CDS | 55.0% | |
| ! | CCGGTGTCGGAAGATCTTGT+TGG | + | chr4.1:46456462-46456481 | None:intergenic | 55.0% |
| AACCGTGCTCTCGGAAGCTG+AGG | - | chr4.1:46456731-46456750 | MS.gene73638:CDS | 60.0% | |
| CACCTCAGCTTCCGAGAGCA+CGG | + | chr4.1:46456736-46456755 | None:intergenic | 60.0% | |
| GGTTAGACGCCGGACAAAGC+CGG | + | chr4.1:46456481-46456500 | None:intergenic | 60.0% | |
| TGCGGAGTGGAACAAAGGGG+TGG | - | chr4.1:46456863-46456882 | MS.gene73638:CDS | 60.0% | |
| !! | CTTCCGACACCGGCTTTGTC+CGG | - | chr4.1:46456469-46456488 | MS.gene73638:CDS | 60.0% |
| ACGCCGGACAAAGCCGGTGT+CGG | + | chr4.1:46456475-46456494 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 46456426 | 46457064 | 46456426 | ID=MS.gene73638 |
| chr4.1 | mRNA | 46456426 | 46457064 | 46456426 | ID=MS.gene73638.t1;Parent=MS.gene73638 |
| chr4.1 | exon | 46456426 | 46457064 | 46456426 | ID=MS.gene73638.t1.exon1;Parent=MS.gene73638.t1 |
| chr4.1 | CDS | 46456426 | 46457064 | 46456426 | ID=cds.MS.gene73638.t1;Parent=MS.gene73638.t1 |
| Gene Sequence |
| Protein sequence |
