Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75758.t1 | XP_003603580.1 | 81.2 | 303 | 48 | 4 | 1 | 302 | 1 | 295 | 7.20E-121 | 443.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75758.t1 | Q6H500 | 49.1 | 163 | 80 | 2 | 58 | 218 | 53 | 214 | 1.4e-27 | 125.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75758.t1 | G7J2W2 | 81.2 | 303 | 48 | 4 | 1 | 302 | 1 | 295 | 5.2e-121 | 443.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene75758.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene75758 | -0.820095 | 8.22E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene75758 | -0.838843 | 2.26E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene75758 | -0.820753 | 5.81E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene75758 | -0.83504 | 2.12E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene75758 | -0.842459 | 2.55E-58 | -1.69E-46 |
| MS.gene049627 | MS.gene75758 | -0.801157 | 1.03E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene75758 | -0.858639 | 7.18E-63 | -1.69E-46 |
| MS.gene050165 | MS.gene75758 | -0.858031 | 1.09E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene75758 | -0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene75758 | 0.849714 | 2.71E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene75758 | -0.854299 | 1.35E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene75758 | -0.825079 | 5.70E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene75758 | -0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene75758 | -0.812919 | 3.33E-51 | -1.69E-46 |
| MS.gene050832 | MS.gene75758 | 0.815026 | 1.14E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene75758 | 0.817681 | 2.91E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene75758 | -0.819796 | 9.62E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene75758 | -0.821815 | 3.30E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene75758 | -0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene051579 | MS.gene75758 | 0.84503 | 5.23E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene75758 | -0.820575 | 6.38E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene75758 | -0.804135 | 2.50E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene75758 | -0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene75758 | -0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene75758 | -0.835306 | 1.81E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene75758 | -0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene75758 | -0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene75758 | 0.815084 | 1.11E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene75758 | -0.833046 | 6.68E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene75758 | -0.830146 | 3.46E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene75758 | 0.811615 | 6.41E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene75758 | -0.801264 | 9.77E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene75758 | 0.860298 | 2.28E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene75758 | -0.827426 | 1.58E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene75758 | -0.831448 | 1.66E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene75758 | -0.812747 | 3.63E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene75758 | -0.833579 | 4.92E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene75758 | -0.847737 | 9.57E-60 | -1.69E-46 |
| MS.gene059479 | MS.gene75758 | 0.80847 | 3.05E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene75758 | -0.869679 | 2.58E-66 | -1.69E-46 |
| MS.gene059718 | MS.gene75758 | -0.816172 | 6.34E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene75758 | -0.802334 | 5.89E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene75758 | 0.821762 | 3.40E-53 | -1.69E-46 |
| MS.gene060694 | MS.gene75758 | 0.804043 | 2.61E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene75758 | -0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene75758 | -0.818865 | 1.57E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene75758 | -0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene75758 | -0.802809 | 4.70E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75758.t1 | MTR_3g109310 | 88.449 | 303 | 26 | 4 | 1 | 302 | 1 | 295 | 0.0 | 536 |
| MS.gene75758.t1 | MTR_1g008990 | 58.076 | 291 | 98 | 11 | 21 | 296 | 51 | 332 | 3.88e-82 | 252 |
| MS.gene75758.t1 | MTR_1g008990 | 62.437 | 197 | 57 | 6 | 21 | 202 | 51 | 245 | 1.38e-58 | 189 |
| MS.gene75758.t1 | MTR_3g110010 | 81.746 | 126 | 23 | 0 | 132 | 257 | 633 | 758 | 8.44e-55 | 191 |
| MS.gene75758.t1 | MTR_3g109982 | 80.952 | 126 | 24 | 0 | 132 | 257 | 649 | 774 | 2.76e-54 | 189 |
| MS.gene75758.t1 | MTR_1g080920 | 48.611 | 144 | 67 | 4 | 98 | 238 | 177 | 316 | 1.51e-22 | 97.4 |
| MS.gene75758.t1 | MTR_7g115120 | 50.000 | 138 | 62 | 3 | 78 | 215 | 150 | 280 | 3.05e-21 | 93.6 |
| MS.gene75758.t1 | MTR_7g115140 | 41.322 | 121 | 69 | 1 | 80 | 200 | 88 | 206 | 7.10e-18 | 81.3 |
| MS.gene75758.t1 | MTR_1g022495 | 32.203 | 118 | 80 | 0 | 100 | 217 | 2 | 119 | 1.78e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75758.t1 | AT5G24800 | 44.828 | 232 | 101 | 8 | 73 | 298 | 62 | 272 | 6.55e-43 | 149 |
| MS.gene75758.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 122 | 252 | 2.20e-19 | 87.4 |
| MS.gene75758.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 129 | 259 | 2.20e-19 | 87.4 |
| MS.gene75758.t1 | AT5G28770 | 52.000 | 100 | 46 | 1 | 102 | 201 | 129 | 226 | 2.15e-15 | 75.1 |
| MS.gene75758.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 3.64e-13 | 70.1 |
| MS.gene75758.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 3.84e-13 | 70.1 |
| MS.gene75758.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 3.92e-13 | 70.1 |
| MS.gene75758.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 4.29e-13 | 70.1 |
| MS.gene75758.t1 | AT3G54620 | 46.429 | 84 | 45 | 0 | 126 | 209 | 229 | 312 | 7.21e-11 | 63.2 |
Find 75 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTCAGCCATCTATTTA+TGG | 0.124761 | 3.3:+89449910 | MS.gene75758:CDS |
| TTTGGTTTATTAGCTGAAAC+TGG | 0.195300 | 3.3:-89450043 | None:intergenic |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | 3.3:+89450603 | MS.gene75758:CDS |
| TTTGACAGAAATACCTTCTA+TGG | 0.244115 | 3.3:-89450177 | None:intergenic |
| ATATTATTCTCTTTGTTGTT+TGG | 0.273240 | 3.3:-89450061 | None:intergenic |
| AGTTTACCGGTAGGAGAGTT+TGG | 0.295352 | 3.3:-89447130 | None:intergenic |
| AATTCGAATCTTGCTGGGTT+TGG | 0.309808 | 3.3:+89450997 | MS.gene75758:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.316743 | 3.3:+89451005 | MS.gene75758:CDS |
| GTGCACAATTCGAATCTTGC+TGG | 0.321584 | 3.3:+89450991 | MS.gene75758:CDS |
| GATGATTCCTGCCAGGTGTT+TGG | 0.375395 | 3.3:-89451496 | None:intergenic |
| AGCACTGATGGTGGAATGTT+TGG | 0.379902 | 3.3:-89449881 | None:intergenic |
| AATGTTTGGGAGTGAAGTTT+TGG | 0.394976 | 3.3:-89449867 | None:intergenic |
| ATTTCCCTGCAGGACATTGA+TGG | 0.400011 | 3.3:-89450935 | None:intergenic |
| ATTTAATAGTTTACAGTTGA+GGG | 0.401919 | 3.3:+89451769 | MS.gene75758:intron |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 3.3:-89450902 | None:intergenic |
| TGAATCTCGATTACGAGTTT+CGG | 0.410788 | 3.3:+89447051 | MS.gene75758:CDS |
| ACAATGATGTCGTCGACAAT+GGG | 0.419225 | 3.3:+89451037 | MS.gene75758:CDS |
| ATTCACTGAATGGGTGCAAC+TGG | 0.421435 | 3.3:-89451466 | None:intergenic |
| TTGATATGAAACGCCATAGA+AGG | 0.425277 | 3.3:+89450164 | MS.gene75758:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 3.3:+89450789 | MS.gene75758:intron |
| TTTGTCTGAACTTGAGTCTC+AGG | 0.431765 | 3.3:+89450333 | MS.gene75758:CDS |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 3.3:-89450965 | None:intergenic |
| TCCGACGAGGATAATGAATC+AGG | 0.453955 | 3.3:+89450115 | MS.gene75758:CDS |
| GTATCCAAGTCTTGCCGATA+CGG | 0.463283 | 3.3:+89447073 | MS.gene75758:CDS |
| CAGCCATCTATTTATGGCAC+TGG | 0.467277 | 3.3:+89449916 | MS.gene75758:CDS |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 3.3:+89450930 | MS.gene75758:CDS |
| ATACCAGTGCCATAAATAGA+TGG | 0.477311 | 3.3:-89449919 | None:intergenic |
| AACACCTGGCAGGAATCATC+AGG | 0.481064 | 3.3:+89451499 | MS.gene75758:CDS |
| TGCACAATTCGAATCTTGCT+GGG | 0.484135 | 3.3:+89450992 | MS.gene75758:CDS |
| ACAAAGAGAATAATATCAAA+GGG | 0.493368 | 3.3:+89450068 | MS.gene75758:CDS |
| CACAACTCATAGCATTGCTT+AGG | 0.501122 | 3.3:-89451062 | None:intergenic |
| TACAATGATGTCGTCGACAA+TGG | 0.501669 | 3.3:+89451036 | MS.gene75758:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 3.3:-89450931 | None:intergenic |
| AATTTAATAGTTTACAGTTG+AGG | 0.523364 | 3.3:+89451768 | MS.gene75758:intron |
| CGCTTTCCAAACTCTCCTAC+CGG | 0.524112 | 3.3:+89447124 | MS.gene75758:CDS |
| GCCTCCGTATCGGCAAGACT+TGG | 0.526307 | 3.3:-89447077 | None:intergenic |
| TTGTCGACGACATCATTGTA+AGG | 0.529396 | 3.3:-89451033 | None:intergenic |
| TTGGTTTATTAGCTGAAACT+GGG | 0.535446 | 3.3:-89450042 | None:intergenic |
| AGGCACTATTATTTCCCTGC+AGG | 0.536074 | 3.3:-89450945 | None:intergenic |
| TTTGCCTGATGATTCCTGCC+AGG | 0.538721 | 3.3:-89451503 | None:intergenic |
| GCACTGATGGTGGAATGTTT+GGG | 0.539183 | 3.3:-89449880 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | 3.3:+89450681 | MS.gene75758:CDS |
| TCATGTGCCAAACACCTGGC+AGG | 0.545616 | 3.3:+89451489 | MS.gene75758:CDS |
| AACAAAGAGAATAATATCAA+AGG | 0.546304 | 3.3:+89450067 | MS.gene75758:CDS |
| GGAAATAATAGTGCCTCATA+CGG | 0.548614 | 3.3:+89450952 | MS.gene75758:CDS |
| GAATTCATGTGCCAAACACC+TGG | 0.548815 | 3.3:+89451485 | MS.gene75758:CDS |
| GATACGGAGGCATTCATGAC+CGG | 0.550151 | 3.3:+89447089 | MS.gene75758:CDS |
| GTGAGTCAGCCAAGAGGTCA+AGG | 0.556802 | 3.3:+89450293 | MS.gene75758:CDS |
| GGCACATGAATTCACTGAAT+GGG | 0.557138 | 3.3:-89451475 | None:intergenic |
| ACCTGATTCATTATCCTCGT+CGG | 0.562154 | 3.3:-89450116 | None:intergenic |
| TGGCACATGAATTCACTGAA+TGG | 0.569415 | 3.3:-89451476 | None:intergenic |
| AGAATCAATAGTAGCACTGA+TGG | 0.570342 | 3.3:-89449893 | None:intergenic |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 3.3:-89450830 | None:intergenic |
| CCGGCGAGCGATGGCAACAA+CGG | 0.577221 | 3.3:+89447007 | None:intergenic |
| ATCAATAGTAGCACTGATGG+TGG | 0.581341 | 3.3:-89449890 | None:intergenic |
| GATTCATTATCCTCGTCGGA+TGG | 0.582930 | 3.3:-89450112 | None:intergenic |
| GAAAGCGGCGGAGCAAACTC+CGG | 0.584176 | 3.3:-89447108 | None:intergenic |
| GGTCATGAATGCCTCCGTAT+CGG | 0.589824 | 3.3:-89447087 | None:intergenic |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 3.3:+89450967 | MS.gene75758:CDS |
| AATATCAAAGGGACATCAAG+TGG | 0.598499 | 3.3:+89450079 | MS.gene75758:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 3.3:+89450963 | MS.gene75758:CDS |
| AATAATAGTGCCTCATACGG+TGG | 0.620063 | 3.3:+89450955 | MS.gene75758:CDS |
| TCCAAGTCTTGCCGATACGG+AGG | 0.642233 | 3.3:+89447076 | MS.gene75758:CDS |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 3.3:+89450931 | MS.gene75758:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | 3.3:+89450627 | MS.gene75758:CDS |
| TAGGAGAGTTTGGAAAGCGG+CGG | 0.671217 | 3.3:-89447120 | None:intergenic |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 3.3:+89450783 | MS.gene75758:intron |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.672836 | 3.3:+89450296 | MS.gene75758:CDS |
| CGGTAGGAGAGTTTGGAAAG+CGG | 0.687279 | 3.3:-89447123 | None:intergenic |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 3.3:-89450883 | None:intergenic |
| CTAATTGTGAGTCAGCCAAG+AGG | 0.709587 | 3.3:+89450287 | MS.gene75758:CDS |
| TTCATCTGATCCATCCGACG+AGG | 0.710432 | 3.3:+89450102 | MS.gene75758:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 3.3:-89450912 | None:intergenic |
| CAATGATGTCGTCGACAATG+GGG | 0.731606 | 3.3:+89451038 | MS.gene75758:CDS |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 3.3:-89450919 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAATTTCAAAATAAAAA+AGG | + | chr3.3:89448325-89448344 | MS.gene75758:intron | 10.0% |
| !! | AATATAACAATTGTTATGAA+GGG | + | chr3.3:89448256-89448275 | MS.gene75758:intron | 15.0% |
| !! | ACAAATAGAGTTAAATTTAT+AGG | - | chr3.3:89447357-89447376 | None:intergenic | 15.0% |
| !! | ATAAAGGAAAATGAATTTAT+TGG | + | chr3.3:89447996-89448015 | MS.gene75758:intron | 15.0% |
| !! | CTAAAATAAATTCTTCTTAA+GGG | - | chr3.3:89449743-89449762 | None:intergenic | 15.0% |
| !! | TATTAGTAGTATAATATTAG+TGG | + | chr3.3:89447787-89447806 | MS.gene75758:intron | 15.0% |
| !! | TTAATATAATTAATCTCGTT+AGG | + | chr3.3:89448737-89448756 | MS.gene75758:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr3.3:89450768-89450787 | MS.gene75758:intron | 15.0% |
| !!! | CTCTTGTTTATTTTTTTTTT+TGG | - | chr3.3:89448785-89448804 | None:intergenic | 15.0% |
| !!! | TATCAACTCTAATTTTAATA+GGG | - | chr3.3:89451357-89451376 | None:intergenic | 15.0% |
| !!! | TCTAAAACTTATAAATTGAT+TGG | - | chr3.3:89448077-89448096 | None:intergenic | 15.0% |
| !!! | TCTAAAATAAATTCTTCTTA+AGG | - | chr3.3:89449744-89449763 | None:intergenic | 15.0% |
| !!! | TGAATTTCATTTTTTTTTGA+GGG | - | chr3.3:89448915-89448934 | None:intergenic | 15.0% |
| !!! | TTATCAACTCTAATTTTAAT+AGG | - | chr3.3:89451358-89451377 | None:intergenic | 15.0% |
| !!! | TTGAATTTCATTTTTTTTTG+AGG | - | chr3.3:89448916-89448935 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTAAAGCAAA+CGG | + | chr3.3:89448594-89448613 | MS.gene75758:intron | 15.0% |
| !!! | TTTTATTTTATTTGAAGACA+TGG | - | chr3.3:89447317-89447336 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAGAAATGAAG+AGG | + | chr3.3:89449264-89449283 | MS.gene75758:intron | 15.0% |
| !! | AAAAACTATAAACTACTAGT+AGG | + | chr3.3:89449034-89449053 | MS.gene75758:intron | 20.0% |
| !! | AAAACTATAAACTACTAGTA+GGG | + | chr3.3:89449035-89449054 | MS.gene75758:intron | 20.0% |
| !! | AAAGAATATTAATCTTGTGT+AGG | - | chr3.3:89447825-89447844 | None:intergenic | 20.0% |
| !! | AACAAAAAATACTATATGGT+TGG | + | chr3.3:89449505-89449524 | MS.gene75758:intron | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | chr3.3:89450067-89450086 | MS.gene75758:CDS | 20.0% |
| !! | AATTTAATAGTTTACAGTTG+AGG | + | chr3.3:89451768-89451787 | MS.gene75758:intron | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | chr3.3:89450068-89450087 | MS.gene75758:CDS | 20.0% |
| !! | AGATTAATATTCTTTGCATT+CGG | + | chr3.3:89447830-89447849 | MS.gene75758:intron | 20.0% |
| !! | ATATAACAATTGTTATGAAG+GGG | + | chr3.3:89448257-89448276 | MS.gene75758:intron | 20.0% |
| !! | ATTTAATAGTTTACAGTTGA+GGG | + | chr3.3:89451769-89451788 | MS.gene75758:intron | 20.0% |
| !! | CAACAACAAAAAATACTATA+TGG | + | chr3.3:89449501-89449520 | MS.gene75758:intron | 20.0% |
| !! | GAATATAACAATTGTTATGA+AGG | + | chr3.3:89448255-89448274 | MS.gene75758:intron | 20.0% |
| !!! | AAACTTTAAAAGATACTACA+TGG | + | chr3.3:89449472-89449491 | MS.gene75758:intron | 20.0% |
| !!! | AAATATTTGGCCTTAATTAA+GGG | + | chr3.3:89451086-89451105 | MS.gene75758:intron | 20.0% |
| !!! | AAATTAATAGTTTTACACTG+TGG | - | chr3.3:89448972-89448991 | None:intergenic | 20.0% |
| !!! | AATCAAATACATCAGTTTTT+TGG | + | chr3.3:89447493-89447512 | MS.gene75758:intron | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr3.3:89450383-89450402 | MS.gene75758:intron | 20.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | chr3.3:89450064-89450083 | None:intergenic | 20.0% |
| !!! | CATATAGTATTTTTTGTTGT+TGG | - | chr3.3:89449503-89449522 | None:intergenic | 20.0% |
| !!! | GATTCTTATTCAAATTTTTG+AGG | - | chr3.3:89449093-89449112 | None:intergenic | 20.0% |
| !!! | TAAATATTTGGCCTTAATTA+AGG | + | chr3.3:89451085-89451104 | MS.gene75758:intron | 20.0% |
| !!! | TACTAGGTTTATCATTTTTT+TGG | + | chr3.3:89448687-89448706 | MS.gene75758:intron | 20.0% |
| !!! | TGTTTTTTTTTAAAGCAAAC+GGG | + | chr3.3:89448595-89448614 | MS.gene75758:intron | 20.0% |
| !!! | TTAATAGAGAAAGTTTTACA+CGG | + | chr3.3:89448823-89448842 | MS.gene75758:intron | 20.0% |
| !!! | TTAGTGTCTTATTATTTACT+AGG | + | chr3.3:89448671-89448690 | MS.gene75758:intron | 20.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | chr3.3:89450603-89450622 | MS.gene75758:CDS | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | chr3.3:89450216-89450235 | MS.gene75758:intron | 25.0% |
| ! | ACTCTATTTGTTTAGTAAGT+TGG | + | chr3.3:89447366-89447385 | MS.gene75758:intron | 25.0% |
| ! | AGATTCTTGGCATTAAAAAA+AGG | - | chr3.3:89447744-89447763 | None:intergenic | 25.0% |
| ! | AGTAGTATAATATTAGTGGT+GGG | + | chr3.3:89447791-89447810 | MS.gene75758:intron | 25.0% |
| ! | ATGACTCTTCAAATGAATAA+AGG | + | chr3.3:89447980-89447999 | MS.gene75758:intron | 25.0% |
| ! | ATTGAGATATATGAGAGAAA+GGG | + | chr3.3:89447529-89447548 | MS.gene75758:intron | 25.0% |
| ! | CAATTCTTCAAATGTAACTT+AGG | - | chr3.3:89448120-89448139 | None:intergenic | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | chr3.3:89451073-89451092 | MS.gene75758:intron | 25.0% |
| ! | CTCAACTTGAAAAATGTATA+TGG | + | chr3.3:89449449-89449468 | MS.gene75758:intron | 25.0% |
| ! | TAGTAGTATAATATTAGTGG+TGG | + | chr3.3:89447790-89447809 | MS.gene75758:intron | 25.0% |
| ! | TATAACAATTGTTATGAAGG+GGG | + | chr3.3:89448258-89448277 | MS.gene75758:intron | 25.0% |
| ! | TCTCAATTTCATTTGATAGA+TGG | - | chr3.3:89449120-89449139 | None:intergenic | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | chr3.3:89450556-89450575 | None:intergenic | 25.0% |
| ! | TTAATCAACGTTTATATCTC+TGG | + | chr3.3:89448034-89448053 | MS.gene75758:intron | 25.0% |
| ! | TTATTCATTTGAAGAGTCAT+GGG | - | chr3.3:89447980-89447999 | None:intergenic | 25.0% |
| ! | TTTATTCATTTGAAGAGTCA+TGG | - | chr3.3:89447981-89448000 | None:intergenic | 25.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | chr3.3:89449991-89450010 | MS.gene75758:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | chr3.3:89450007-89450026 | MS.gene75758:intron | 25.0% |
| !! | CGAAATTAATATAAAGGTAC+AGG | + | chr3.3:89449061-89449080 | MS.gene75758:intron | 25.0% |
| !! | CTTTAAAAAAAAACAACGAC+CGG | - | chr3.3:89448590-89448609 | None:intergenic | 25.0% |
| !! | GTTGAACGTTTTGTATAAAA+AGG | + | chr3.3:89451204-89451223 | MS.gene75758:intron | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | chr3.3:89450451-89450470 | MS.gene75758:intron | 25.0% |
| !! | TGGAAATTTTGCTTAAAAGA+GGG | + | chr3.3:89447558-89447577 | MS.gene75758:intron | 25.0% |
| !! | TTGGAAATTTTGCTTAAAAG+AGG | + | chr3.3:89447557-89447576 | MS.gene75758:intron | 25.0% |
| !!! | AAGTTTGTTCTTGTTATTTC+CGG | - | chr3.3:89447280-89447299 | None:intergenic | 25.0% |
| !!! | AGACTCTTTTTTTTCATTTG+AGG | - | chr3.3:89447951-89447970 | None:intergenic | 25.0% |
| !!! | AGTTTTTTGGCTGATAATTT+GGG | + | chr3.3:89447506-89447525 | MS.gene75758:intron | 25.0% |
| !!! | ATACATTTTTCAAGTTGAGT+TGG | - | chr3.3:89449448-89449467 | None:intergenic | 25.0% |
| !!! | GACTCTTTTTTTTCATTTGA+GGG | - | chr3.3:89447950-89447969 | None:intergenic | 25.0% |
| !!! | GGGTATCGAAATTAATATAA+AGG | + | chr3.3:89449055-89449074 | MS.gene75758:intron | 25.0% |
| !!! | TATTCAAATTTTTGAGGTCT+TGG | - | chr3.3:89449087-89449106 | None:intergenic | 25.0% |
| AAACTGATTGTTTAGTGATG+TGG | - | chr3.3:89450833-89450852 | None:intergenic | 30.0% | |
| AACGTTTATATCTCTGGTTA+GGG | + | chr3.3:89448040-89448059 | MS.gene75758:intron | 30.0% | |
| AATGTCAAACTACATGTATG+AGG | - | chr3.3:89449990-89450009 | None:intergenic | 30.0% | |
| AGAAATCAAGACAAGATTCT+TGG | - | chr3.3:89447757-89447776 | None:intergenic | 30.0% | |
| ATATTTGTACGACTATAGCT+TGG | - | chr3.3:89447925-89447944 | None:intergenic | 30.0% | |
| ATCACTTCATCAAATCACAT+AGG | - | chr3.3:89449667-89449686 | None:intergenic | 30.0% | |
| ATTATATAACCATTCTCTCG+TGG | - | chr3.3:89448185-89448204 | None:intergenic | 30.0% | |
| CATGCTTCAATTGAAATAGT+AGG | - | chr3.3:89450480-89450499 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | chr3.3:89450557-89450576 | None:intergenic | 30.0% | |
| GATCAATTATGTGTAATCGT+TGG | - | chr3.3:89448950-89448969 | None:intergenic | 30.0% | |
| GATTGAGATATATGAGAGAA+AGG | + | chr3.3:89447528-89447547 | MS.gene75758:intron | 30.0% | |
| GCTCACAAAAAATCTTCATA+AGG | - | chr3.3:89447641-89447660 | None:intergenic | 30.0% | |
| TACTAGTCAACAATTTCATG+AGG | + | chr3.3:89450627-89450646 | MS.gene75758:CDS | 30.0% | |
| TATAGAGACAGATTGTAAGA+CGG | + | chr3.3:89449386-89449405 | MS.gene75758:intron | 30.0% | |
| TCAAGTGAAACCCTTAATTA+AGG | - | chr3.3:89451099-89451118 | None:intergenic | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | chr3.3:89450250-89450269 | MS.gene75758:intron | 30.0% | |
| TTGAACGAAAACCTAAAGTA+GGG | + | chr3.3:89447602-89447621 | MS.gene75758:intron | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | chr3.3:89450045-89450064 | None:intergenic | 30.0% | |
| TTTGACAGAAATACCTTCTA+TGG | - | chr3.3:89450180-89450199 | None:intergenic | 30.0% | |
| ! | ACAATAAGATAGTTGAGTTG+AGG | - | chr3.3:89451572-89451591 | None:intergenic | 30.0% |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | chr3.3:89450352-89450371 | MS.gene75758:intron | 30.0% |
| ! | GGAAATTTTGCTTAAAAGAG+GGG | + | chr3.3:89447559-89447578 | MS.gene75758:intron | 30.0% |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | chr3.3:89450046-89450065 | None:intergenic | 30.0% |
| ! | TTTTGTGAGCAAAAAAGACT+TGG | + | chr3.3:89447651-89447670 | MS.gene75758:intron | 30.0% |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | chr3.3:89450555-89450574 | MS.gene75758:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | chr3.3:89450387-89450406 | MS.gene75758:intron | 30.0% |
| !!! | ATAGCATCATAGCTTTGTTT+TGG | - | chr3.3:89451626-89451645 | None:intergenic | 30.0% |
| !!! | CAGTTTTTTGGCTGATAATT+TGG | + | chr3.3:89447505-89447524 | MS.gene75758:intron | 30.0% |
| AAAAATGATCCACGAGAGAA+TGG | + | chr3.3:89448173-89448192 | MS.gene75758:intron | 35.0% | |
| AAAACCTAAAGTAGGGATGT+GGG | + | chr3.3:89447609-89447628 | MS.gene75758:intron | 35.0% | |
| AATATCAAAGGGACATCAAG+TGG | + | chr3.3:89450079-89450098 | MS.gene75758:CDS | 35.0% | |
| ACTTTGTAACATCCATGTGA+AGG | + | chr3.3:89449687-89449706 | MS.gene75758:intron | 35.0% | |
| AGAAAGAGAGAAGAGTTTAC+CGG | - | chr3.3:89447146-89447165 | None:intergenic | 35.0% | |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr3.3:89450783-89450802 | MS.gene75758:intron | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | chr3.3:89449922-89449941 | None:intergenic | 35.0% | |
| CAACGTTTATATCTCTGGTT+AGG | + | chr3.3:89448039-89448058 | MS.gene75758:intron | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | chr3.3:89450413-89450432 | MS.gene75758:intron | 35.0% | |
| CATGAAAAGGTTACATAAGC+TGG | - | chr3.3:89449791-89449810 | None:intergenic | 35.0% | |
| CCTGCTATTCAATCATGAAA+AGG | - | chr3.3:89449804-89449823 | None:intergenic | 35.0% | |
| CGAATGAATACTTCAAGACT+AGG | + | chr3.3:89448995-89449014 | MS.gene75758:intron | 35.0% | |
| CTTTGTAACATCCATGTGAA+GGG | + | chr3.3:89449688-89449707 | MS.gene75758:intron | 35.0% | |
| GATTCTCAGCCATCTATTTA+TGG | + | chr3.3:89449910-89449929 | MS.gene75758:CDS | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | chr3.3:89450952-89450971 | MS.gene75758:CDS | 35.0% | |
| GTATTGTATGACAAAGTGAG+AGG | - | chr3.3:89451289-89451308 | None:intergenic | 35.0% | |
| GTTGAACGAAAACCTAAAGT+AGG | + | chr3.3:89447601-89447620 | MS.gene75758:intron | 35.0% | |
| TAAAAGAGGGGAAGTGAAAA+AGG | + | chr3.3:89447571-89447590 | MS.gene75758:intron | 35.0% | |
| TACAGTTGAGGGATCAATAA+TGG | + | chr3.3:89451780-89451799 | MS.gene75758:CDS | 35.0% | |
| TGAATCTCGATTACGAGTTT+CGG | + | chr3.3:89447051-89447070 | MS.gene75758:CDS | 35.0% | |
| TGAGCACATCATTTATGTAG+AGG | + | chr3.3:89449539-89449558 | MS.gene75758:intron | 35.0% | |
| TTACAGAGTAGCATTCATCA+TGG | - | chr3.3:89451389-89451408 | None:intergenic | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | chr3.3:89450164-89450183 | MS.gene75758:CDS | 35.0% | |
| TTTCATGGCACTGTATTGAA+TGG | - | chr3.3:89451311-89451330 | None:intergenic | 35.0% | |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | chr3.3:89449870-89449889 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | chr3.3:89449896-89449915 | None:intergenic | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | chr3.3:89449832-89449851 | MS.gene75758:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | chr3.3:89449869-89449888 | None:intergenic | 35.0% |
| ! | CCTTTTCATGATTGAATAGC+AGG | + | chr3.3:89449801-89449820 | MS.gene75758:intron | 35.0% |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | chr3.3:89449829-89449848 | MS.gene75758:CDS | 35.0% |
| ! | TAGAGAAAGTTTTACACGGT+CGG | + | chr3.3:89448827-89448846 | MS.gene75758:intron | 35.0% |
| ! | TTTGAGACAATTTCTCATGC+AGG | + | chr3.3:89449303-89449322 | MS.gene75758:intron | 35.0% |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | chr3.3:89449925-89449944 | MS.gene75758:intron | 35.0% |
| !! | CTACATCTGATTTTAGCACT+CGG | - | chr3.3:89450666-89450685 | None:intergenic | 35.0% |
| !! | CTCTCGTGGATCATTTTTAT+TGG | - | chr3.3:89448171-89448190 | None:intergenic | 35.0% |
| !! | GAATACTGATAGCGTGTTTT+TGG | - | chr3.3:89449336-89449355 | None:intergenic | 35.0% |
| !! | TGAGTTGAGGTTTTGTAACA+AGG | - | chr3.3:89451559-89451578 | None:intergenic | 35.0% |
| AATAATAGTGCCTCATACGG+TGG | + | chr3.3:89450955-89450974 | MS.gene75758:CDS | 40.0% | |
| AATGCACTCCTAACGTAAAC+CGG | + | chr3.3:89448568-89448587 | MS.gene75758:intron | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | chr3.3:89451037-89451056 | MS.gene75758:CDS | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | chr3.3:89450119-89450138 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | chr3.3:89450260-89450279 | MS.gene75758:intron | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | chr3.3:89451065-89451084 | None:intergenic | 40.0% | |
| CTTTAAATTCAAGCAGCCGT+TGG | + | chr3.3:89447857-89447876 | MS.gene75758:intron | 40.0% | |
| GAAAACCTAAAGTAGGGATG+TGG | + | chr3.3:89447608-89447627 | MS.gene75758:intron | 40.0% | |
| GAGATATATGAGAGAAAGGG+AGG | + | chr3.3:89447532-89447551 | MS.gene75758:intron | 40.0% | |
| GCCACACACATAATCTTTCA+TGG | - | chr3.3:89451326-89451345 | None:intergenic | 40.0% | |
| GCCATGAAAGATTATGTGTG+TGG | + | chr3.3:89451322-89451341 | MS.gene75758:intron | 40.0% | |
| GGCACATGAATTCACTGAAT+GGG | - | chr3.3:89451478-89451497 | None:intergenic | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | chr3.3:89451036-89451055 | MS.gene75758:CDS | 40.0% | |
| TAGTGTGAACGCATGACTTT+GGG | + | chr3.3:89447710-89447729 | MS.gene75758:intron | 40.0% | |
| TCTAAGTTCCACCAATCCAA+CGG | - | chr3.3:89447876-89447895 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | chr3.3:89450016-89450035 | MS.gene75758:intron | 40.0% | |
| TGAGGAATGTTGAGATGTGT+AGG | - | chr3.3:89449972-89449991 | None:intergenic | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | chr3.3:89450992-89451011 | MS.gene75758:CDS | 40.0% | |
| TGGCACATGAATTCACTGAA+TGG | - | chr3.3:89451479-89451498 | None:intergenic | 40.0% | |
| TGTGAGCAAAAAAGACTTGG+TGG | + | chr3.3:89447654-89447673 | MS.gene75758:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | chr3.3:89450261-89450280 | MS.gene75758:intron | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | chr3.3:89451036-89451055 | None:intergenic | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | chr3.3:89450333-89450352 | MS.gene75758:CDS | 40.0% | |
| ! | GTGAGCAAAAAAGACTTGGT+GGG | + | chr3.3:89447655-89447674 | MS.gene75758:intron | 40.0% |
| ! | TATGAGAGAAAGGGAGGTAT+TGG | + | chr3.3:89447538-89447557 | MS.gene75758:intron | 40.0% |
| !! | AACTGAAAGTACTGATGACG+TGG | + | chr3.3:89447208-89447227 | MS.gene75758:intron | 40.0% |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | chr3.3:89449893-89449912 | None:intergenic | 40.0% |
| !! | CATTGACATGCACTGATTGT+TGG | + | chr3.3:89451695-89451714 | MS.gene75758:intron | 40.0% |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | chr3.3:89450573-89450592 | MS.gene75758:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | chr3.3:89450681-89450700 | MS.gene75758:CDS | 40.0% |
| !!! | CTCTGTTTTTACCCTTCACA+TGG | - | chr3.3:89449702-89449721 | None:intergenic | 40.0% |
| AATTCAAGCAGCCGTTGGAT+TGG | + | chr3.3:89447862-89447881 | MS.gene75758:intron | 45.0% | |
| AGAGAGAAGAGTTTACCGGT+AGG | - | chr3.3:89447142-89447161 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | chr3.3:89450948-89450967 | None:intergenic | 45.0% | |
| AGTGTGAACGCATGACTTTG+GGG | + | chr3.3:89447711-89447730 | MS.gene75758:intron | 45.0% | |
| AGTTTACCGGTAGGAGAGTT+TGG | - | chr3.3:89447133-89447152 | None:intergenic | 45.0% | |
| ATTCACTGAATGGGTGCAAC+TGG | - | chr3.3:89451469-89451488 | None:intergenic | 45.0% | |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr3.3:89450938-89450957 | None:intergenic | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | chr3.3:89451038-89451057 | MS.gene75758:CDS | 45.0% | |
| CAGCCATCTATTTATGGCAC+TGG | + | chr3.3:89449916-89449935 | MS.gene75758:CDS | 45.0% | |
| CTAATTGTGAGTCAGCCAAG+AGG | + | chr3.3:89450287-89450306 | MS.gene75758:CDS | 45.0% | |
| CTAGTGTGAACGCATGACTT+TGG | + | chr3.3:89447709-89447728 | MS.gene75758:intron | 45.0% | |
| GAATTCATGTGCCAAACACC+TGG | + | chr3.3:89451485-89451504 | MS.gene75758:CDS | 45.0% | |
| GAGACAATTTCTCATGCAGG+AGG | + | chr3.3:89449306-89449325 | MS.gene75758:intron | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | chr3.3:89450115-89450134 | None:intergenic | 45.0% | |
| GGAATCCTACCATGCAGTTT+GGG | + | chr3.3:89447229-89447248 | MS.gene75758:intron | 45.0% | |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr3.3:89450789-89450808 | MS.gene75758:intron | 45.0% | |
| GTATCCAAGTCTTGCCGATA+CGG | + | chr3.3:89447073-89447092 | MS.gene75758:CDS | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | chr3.3:89450991-89451010 | MS.gene75758:CDS | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | chr3.3:89450115-89450134 | MS.gene75758:CDS | 45.0% | |
| TCGCTCAACGCTTACTTAAC+CGG | + | chr3.3:89447258-89447277 | MS.gene75758:intron | 45.0% | |
| TGGAATCCTACCATGCAGTT+TGG | + | chr3.3:89447228-89447247 | MS.gene75758:intron | 45.0% | |
| ! | AACAACGACCGGTTTACGTT+AGG | - | chr3.3:89448579-89448598 | None:intergenic | 45.0% |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr3.3:89450886-89450905 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr3.3:89450922-89450941 | None:intergenic | 45.0% |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr3.3:89450305-89450324 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | chr3.3:89449884-89449903 | None:intergenic | 45.0% |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | chr3.3:89449883-89449902 | None:intergenic | 45.0% |
| !! | TAAATTAAGTTAAATTAAAT+TGG | - | chr3.3:89451754-89451773 | None:intergenic | 5.0% |
| !!! | AATATGTTAATTTTTTTTTT+AGG | - | chr3.3:89448228-89448247 | None:intergenic | 5.0% |
| !!! | ATTTTTACTTATATATAATT+TGG | - | chr3.3:89447438-89447457 | None:intergenic | 5.0% |
| !!! | TTATTAATTAATATTGTTTT+AGG | + | chr3.3:89451442-89451461 | MS.gene75758:intron | 5.0% |
| AACACCTGGCAGGAATCATC+AGG | + | chr3.3:89451499-89451518 | MS.gene75758:CDS | 50.0% | |
| ATGAAGGGGGAGAGATAGAG+AGG | + | chr3.3:89448271-89448290 | MS.gene75758:intron | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr3.3:89450931-89450950 | MS.gene75758:CDS | 50.0% | |
| CGCTTTCCAAACTCTCCTAC+CGG | + | chr3.3:89447124-89447143 | MS.gene75758:CDS | 50.0% | |
| CGGTAGGAGAGTTTGGAAAG+CGG | - | chr3.3:89447126-89447145 | None:intergenic | 50.0% | |
| GATGATTCCTGCCAGGTGTT+TGG | - | chr3.3:89451499-89451518 | None:intergenic | 50.0% | |
| GCAACCCACATCCCTACTTT+AGG | - | chr3.3:89447616-89447635 | None:intergenic | 50.0% | |
| GGTCATGAATGCCTCCGTAT+CGG | - | chr3.3:89447090-89447109 | None:intergenic | 50.0% | |
| GTGTGAACGCATGACTTTGG+GGG | + | chr3.3:89447712-89447731 | MS.gene75758:intron | 50.0% | |
| TAGGAGAGTTTGGAAAGCGG+CGG | - | chr3.3:89447123-89447142 | None:intergenic | 50.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | chr3.3:89450102-89450121 | MS.gene75758:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr3.3:89450915-89450934 | None:intergenic | 50.0% | |
| TTTGCCTGATGATTCCTGCC+AGG | - | chr3.3:89451506-89451525 | None:intergenic | 50.0% | |
| !! | GATACGGAGGCATTCATGAC+CGG | + | chr3.3:89447089-89447108 | MS.gene75758:CDS | 50.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr3.3:89450968-89450987 | None:intergenic | 55.0% | |
| AAGGGGGAGAGATAGAGAGG+AGG | + | chr3.3:89448274-89448293 | MS.gene75758:intron | 55.0% | |
| AGGGGGAGAGATAGAGAGGA+GGG | + | chr3.3:89448275-89448294 | MS.gene75758:intron | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr3.3:89450296-89450315 | MS.gene75758:CDS | 55.0% | |
| AGTGTGAGGTAGGGAGAGAG+GGG | + | chr3.3:89448298-89448317 | MS.gene75758:intron | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr3.3:89450905-89450924 | None:intergenic | 55.0% | |
| CCTACCATGCAGTTTGGGTG+AGG | + | chr3.3:89447234-89447253 | MS.gene75758:intron | 55.0% | |
| CCTCACCCAAACTGCATGGT+AGG | - | chr3.3:89447237-89447256 | None:intergenic | 55.0% | |
| CGATCCTCACCCAAACTGCA+TGG | - | chr3.3:89447241-89447260 | None:intergenic | 55.0% | |
| GAGTGTGAGGTAGGGAGAGA+GGG | + | chr3.3:89448297-89448316 | MS.gene75758:intron | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr3.3:89450930-89450949 | MS.gene75758:CDS | 55.0% | |
| GTGAGTCAGCCAAGAGGTCA+AGG | + | chr3.3:89450293-89450312 | MS.gene75758:CDS | 55.0% | |
| TCATGTGCCAAACACCTGGC+AGG | + | chr3.3:89451489-89451508 | MS.gene75758:CDS | 55.0% | |
| TCCAAGTCTTGCCGATACGG+AGG | + | chr3.3:89447076-89447095 | MS.gene75758:CDS | 55.0% | |
| ! | AACGCATGACTTTGGGGGTG+TGG | + | chr3.3:89447717-89447736 | MS.gene75758:intron | 55.0% |
| ! | ACGCATGACTTTGGGGGTGT+GGG | + | chr3.3:89447718-89447737 | MS.gene75758:intron | 55.0% |
| ! | AGAGGAGGGAGTGTGAGGTA+GGG | + | chr3.3:89448289-89448308 | MS.gene75758:intron | 55.0% |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr3.3:89450934-89450953 | None:intergenic | 55.0% |
| ! | GATAGAGAGGAGGGAGTGTG+AGG | + | chr3.3:89448284-89448303 | MS.gene75758:intron | 55.0% |
| ! | TCAAGCAGCCGTTGGATTGG+TGG | + | chr3.3:89447865-89447884 | MS.gene75758:intron | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr3.3:89450963-89450982 | MS.gene75758:CDS | 55.0% |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr3.3:89450967-89450986 | MS.gene75758:CDS | 55.0% |
| GAAAGCGGCGGAGCAAACTC+CGG | - | chr3.3:89447111-89447130 | None:intergenic | 60.0% | |
| GGAGTGTGAGGTAGGGAGAG+AGG | + | chr3.3:89448296-89448315 | MS.gene75758:intron | 60.0% | |
| GTGTGAGGTAGGGAGAGAGG+GGG | + | chr3.3:89448299-89448318 | MS.gene75758:intron | 60.0% | |
| ! | GAGAGGAGGGAGTGTGAGGT+AGG | + | chr3.3:89448288-89448307 | MS.gene75758:intron | 60.0% |
| ! | GCCTCCGTATCGGCAAGACT+TGG | - | chr3.3:89447080-89447099 | None:intergenic | 60.0% |
| GAGGTAGGGAGAGAGGGGGA+GGG | + | chr3.3:89448303-89448322 | MS.gene75758:intron | 65.0% | |
| TGAGGTAGGGAGAGAGGGGG+AGG | + | chr3.3:89448302-89448321 | MS.gene75758:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89447017 | 89451799 | 89447017 | ID=MS.gene75758 |
| chr3.3 | mRNA | 89447017 | 89451799 | 89447017 | ID=MS.gene75758.t1;Parent=MS.gene75758 |
| chr3.3 | exon | 89447017 | 89447145 | 89447017 | ID=MS.gene75758.t1.exon1;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89447017 | 89447145 | 89447017 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89449823 | 89449937 | 89449823 | ID=MS.gene75758.t1.exon2;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89449823 | 89449937 | 89449823 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89450035 | 89450185 | 89450035 | ID=MS.gene75758.t1.exon3;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89450035 | 89450185 | 89450035 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89450279 | 89450354 | 89450279 | ID=MS.gene75758.t1.exon4;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89450279 | 89450354 | 89450279 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89450577 | 89450702 | 89450577 | ID=MS.gene75758.t1.exon5;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89450577 | 89450702 | 89450577 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89450790 | 89451083 | 89450790 | ID=MS.gene75758.t1.exon6;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89450790 | 89451083 | 89450790 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89451464 | 89451525 | 89451464 | ID=MS.gene75758.t1.exon7;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89451464 | 89451525 | 89451464 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| chr3.3 | exon | 89451778 | 89451799 | 89451778 | ID=MS.gene75758.t1.exon8;Parent=MS.gene75758.t1 |
| chr3.3 | CDS | 89451778 | 89451799 | 89451778 | ID=cds.MS.gene75758.t1;Parent=MS.gene75758.t1 |
| Gene Sequence |
| Protein sequence |
