Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78189.t1 | XP_013464042.1 | 85.3 | 586 | 76 | 2 | 1 | 586 | 1 | 576 | 9.60E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78189.t1 | Q56X72 | 56.2 | 267 | 114 | 2 | 279 | 544 | 173 | 437 | 3.6e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78189.t1 | A0A072V8B4 | 85.3 | 586 | 76 | 2 | 1 | 586 | 1 | 576 | 6.9e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene78189 | 0.857593 | 1.47E-62 | -1.69E-46 |
| MS.gene049227 | MS.gene78189 | 0.802482 | 5.50E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene78189 | 0.811835 | 5.74E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene78189 | 0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene050224 | MS.gene78189 | 0.802661 | 5.05E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene78189 | 0.804778 | 1.83E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene78189 | 0.810229 | 1.28E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene78189 | 0.823503 | 1.34E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene78189 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene78189 | 0.809368 | 1.96E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene78189 | 0.841549 | 4.44E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene78189 | 0.805716 | 1.17E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene78189 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene78189 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene05150 | MS.gene78189 | 0.809454 | 1.88E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene78189 | 0.829003 | 6.56E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene78189 | 0.821334 | 4.27E-53 | -1.69E-46 |
| MS.gene051720 | MS.gene78189 | 0.820467 | 6.76E-53 | -1.69E-46 |
| MS.gene052133 | MS.gene78189 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene78189 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene78189 | 0.834567 | 2.78E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene78189 | 0.830543 | 2.77E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene78189 | 0.826243 | 3.02E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene78189 | 0.855664 | 5.42E-62 | -1.69E-46 |
| MS.gene053079 | MS.gene78189 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene78189 | 0.817213 | 3.70E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene78189 | 0.872365 | 3.36E-67 | -1.69E-46 |
| MS.gene053581 | MS.gene78189 | 0.855235 | 7.23E-62 | -1.69E-46 |
| MS.gene05364 | MS.gene78189 | 0.81405 | 1.88E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene78189 | 0.863367 | 2.62E-64 | -1.69E-46 |
| MS.gene054824 | MS.gene78189 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene78189 | 0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene78189 | 0.867892 | 9.79E-66 | -1.69E-46 |
| MS.gene055466 | MS.gene78189 | 0.861284 | 1.14E-63 | -1.69E-46 |
| MS.gene055467 | MS.gene78189 | 0.828044 | 1.12E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene78189 | 0.858874 | 6.11E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene78189 | 0.857837 | 1.24E-62 | -1.69E-46 |
| MS.gene055537 | MS.gene78189 | 0.825818 | 3.81E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene78189 | -0.831891 | 1.29E-55 | -1.69E-46 |
| MS.gene055608 | MS.gene78189 | 0.806555 | 7.77E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene78189 | 0.810189 | 1.30E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene78189 | 0.833152 | 6.28E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene78189 | 0.837883 | 4.00E-57 | -1.69E-46 |
| MS.gene056043 | MS.gene78189 | -0.823602 | 1.27E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene78189 | 0.859035 | 5.46E-63 | -1.69E-46 |
| MS.gene056507 | MS.gene78189 | 0.810141 | 1.34E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene78189 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene057446 | MS.gene78189 | 0.80568 | 1.19E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene78189 | 0.812855 | 3.44E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene78189 | 0.841751 | 3.93E-58 | -1.69E-46 |
| MS.gene058852 | MS.gene78189 | 0.836686 | 8.09E-57 | -1.69E-46 |
| MS.gene058945 | MS.gene78189 | 0.810396 | 1.18E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene78189 | 0.814598 | 1.42E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene78189 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene060519 | MS.gene78189 | 0.820286 | 7.43E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene78189 | 0.828333 | 9.53E-55 | -1.69E-46 |
| MS.gene060603 | MS.gene78189 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene78189 | 0.826557 | 2.54E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene78189 | 0.825925 | 3.59E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78189 | MS.gene35163 | PPI |
| MS.gene36496 | MS.gene78189 | PPI |
| MS.gene028296 | MS.gene78189 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78189.t1 | MTR_2g460800 | 93.515 | 586 | 28 | 2 | 1 | 586 | 1 | 576 | 0.0 | 1051 |
| MS.gene78189.t1 | MTR_2g460800 | 92.510 | 494 | 27 | 2 | 1 | 494 | 1 | 484 | 0.0 | 850 |
| MS.gene78189.t1 | MTR_2g090620 | 34.483 | 261 | 155 | 5 | 322 | 569 | 112 | 369 | 2.28e-45 | 165 |
| MS.gene78189.t1 | MTR_4g078740 | 36.694 | 248 | 151 | 4 | 301 | 546 | 25 | 268 | 5.79e-44 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78189.t1 | AT5G58000 | 41.096 | 584 | 251 | 22 | 6 | 549 | 17 | 547 | 1.35e-109 | 340 |
| MS.gene78189.t1 | AT5G58000 | 44.068 | 472 | 198 | 15 | 93 | 549 | 21 | 441 | 2.29e-106 | 329 |
| MS.gene78189.t1 | AT2G20590 | 36.015 | 261 | 158 | 3 | 294 | 549 | 122 | 378 | 3.96e-43 | 160 |
| MS.gene78189.t1 | AT2G20590 | 36.364 | 231 | 145 | 2 | 320 | 549 | 136 | 365 | 1.07e-42 | 159 |
| MS.gene78189.t1 | AT4G28430 | 38.140 | 215 | 131 | 2 | 336 | 549 | 193 | 406 | 6.02e-38 | 146 |
| MS.gene78189.t1 | AT2G20590 | 37.079 | 178 | 106 | 2 | 317 | 489 | 142 | 318 | 3.50e-29 | 118 |
Find 114 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGGTTTGGAGAAATTT+TGG | 0.157130 | 2.2:-33055578 | None:intergenic |
| CTAGACTCTGCAACTTGTTT+TGG | 0.174874 | 2.2:-33055760 | None:intergenic |
| TGAAAATTTCTTACTTGAAT+TGG | 0.195478 | 2.2:-33055595 | None:intergenic |
| TTTCCTTTGGAAATCTGAAT+TGG | 0.240670 | 2.2:-33054844 | None:intergenic |
| AGTACTATTTCAGGCTTCTT+TGG | 0.243221 | 2.2:+33057019 | MS.gene78189:intron |
| CTACTGCGTTCTTCTTCTTT+TGG | 0.250422 | 2.2:-33055725 | None:intergenic |
| GTGGAAGTTTCATAACTATT+TGG | 0.254654 | 2.2:+33056876 | MS.gene78189:CDS |
| TTGTGTTGTTTCTGTCTAAC+TGG | 0.259168 | 2.2:-33059147 | None:intergenic |
| TTTCTTCTGTTCTGCTTCAT+TGG | 0.277124 | 2.2:-33055448 | None:intergenic |
| TCTATAGATCCTTAATTTGC+AGG | 0.277885 | 2.2:+33056246 | MS.gene78189:CDS |
| GACAAGAATTCATTCAAATA+AGG | 0.278389 | 2.2:-33056688 | None:intergenic |
| ATGAAGAGTGATCAAGTTAA+AGG | 0.286954 | 2.2:+33054706 | MS.gene78189:CDS |
| AGTTACTTACCTGCAAATTA+AGG | 0.289401 | 2.2:-33056255 | None:intergenic |
| TCAGCATTTGTGTTTGGAAT+TGG | 0.312327 | 2.2:+33055902 | MS.gene78189:CDS |
| TTTGAATTCCTTCTGATTGT+AGG | 0.313483 | 2.2:-33055549 | None:intergenic |
| AAAGAATGAATTTGATGAAT+TGG | 0.314502 | 2.2:+33055092 | MS.gene78189:CDS |
| TCATTAACATTCTTATTGAT+TGG | 0.318213 | 2.2:-33055012 | None:intergenic |
| TGAATCAACAAGAAAATGAT+AGG | 0.319395 | 2.2:+33055364 | MS.gene78189:CDS |
| CATCTGTTGTTGCTCGCATT+TGG | 0.323883 | 2.2:+33058844 | MS.gene78189:CDS |
| ATGAAATGGAAGACTCTTCT+TGG | 0.325297 | 2.2:-33054896 | None:intergenic |
| TGCAATTTGGATGCTGAAAT+TGG | 0.325517 | 2.2:+33056660 | MS.gene78189:CDS |
| GAAAATTTCTTACTTGAATT+GGG | 0.330039 | 2.2:-33055594 | None:intergenic |
| TTTCTTACTTGAATTGGGTT+TGG | 0.336832 | 2.2:-33055589 | None:intergenic |
| GAATCCTTTCTTGACTTTGT+TGG | 0.339840 | 2.2:-33059181 | None:intergenic |
| TAAGAGAACAAGATGCAATT+TGG | 0.344866 | 2.2:+33056647 | MS.gene78189:CDS |
| CCAACATGAACCACTGATTC+AGG | 0.347212 | 2.2:-33055222 | None:intergenic |
| ATACTATCAACAACACTATA+TGG | 0.360600 | 2.2:+33059068 | MS.gene78189:CDS |
| TAGGCATATTCGGTCTAGTA+TGG | 0.366112 | 2.2:+33058814 | MS.gene78189:CDS |
| ATCGGGCTTCTTGTATGAAA+TGG | 0.367236 | 2.2:-33054910 | None:intergenic |
| CTTATCTTTCTTGATTGAAT+CGG | 0.369410 | 2.2:-33054928 | None:intergenic |
| ATCTGTTGTTGCTCGCATTT+GGG | 0.390664 | 2.2:+33058845 | MS.gene78189:CDS |
| ACTACAAGAGGGACAGAAAC+TGG | 0.394786 | 2.2:-33055516 | None:intergenic |
| TCAAGATCAGCATTTGTGTT+TGG | 0.401200 | 2.2:+33055896 | MS.gene78189:CDS |
| TTATCTTTCTTGATTGAATC+GGG | 0.401479 | 2.2:-33054927 | None:intergenic |
| TTCCTTTGGAAATCTGAATT+GGG | 0.411037 | 2.2:-33054843 | None:intergenic |
| TTGAATTCCTTCTGATTGTA+GGG | 0.414805 | 2.2:-33055548 | None:intergenic |
| TTTCATAACTATTTGGAAGA+TGG | 0.416263 | 2.2:+33056883 | MS.gene78189:CDS |
| TGCAGTGTTTGTACTATTTG+TGG | 0.423837 | 2.2:+33059038 | MS.gene78189:intron |
| GAATTTGATGAATTGGATGA+TGG | 0.435863 | 2.2:+33055099 | MS.gene78189:CDS |
| GAATACGAAGAGCAGATCTT+TGG | 0.436812 | 2.2:-33057055 | None:intergenic |
| AGAAGAGGTGTGGTTGCTGC+AGG | 0.437201 | 2.2:+33054664 | MS.gene78189:CDS |
| TTGATTCACAGTAACAACTT+TGG | 0.439920 | 2.2:-33055349 | None:intergenic |
| AGATTGAGAAGAATCTCAAT+TGG | 0.440013 | 2.2:+33054796 | MS.gene78189:CDS |
| GCTGTGGCTCTAGGCATATT+CGG | 0.445263 | 2.2:+33058804 | MS.gene78189:CDS |
| TTTGTGATGAAATCTCATAT+TGG | 0.448436 | 2.2:-33055481 | None:intergenic |
| TTCGTCGATTTCGGGATGCA+TGG | 0.451129 | 2.2:+33058760 | MS.gene78189:CDS |
| AAGGGTGGTGGTGAAGCTGC+AGG | 0.452129 | 2.2:+33054964 | MS.gene78189:CDS |
| TCAGCACAATTAACTGCATA+TGG | 0.452909 | 2.2:+33057076 | MS.gene78189:CDS |
| ATTACCTTCATTGTGGTGCC+AGG | 0.462054 | 2.2:-33056739 | None:intergenic |
| GTAACAACTTTGGATTCTGC+TGG | 0.465322 | 2.2:-33055339 | None:intergenic |
| ATTTCTGGAATGTCCTATGT+AGG | 0.468181 | 2.2:+33056197 | MS.gene78189:CDS |
| ATTTGGAAGATGGCTAAAAT+CGG | 0.474250 | 2.2:+33056893 | MS.gene78189:CDS |
| GTTGTTGCTCGCATTTGGGC+AGG | 0.478972 | 2.2:+33058849 | MS.gene78189:CDS |
| TTAATGATTCAATTGAATTG+AGG | 0.479489 | 2.2:+33055028 | MS.gene78189:CDS |
| AAGTCAAGAAAGGATTCTAA+AGG | 0.492545 | 2.2:+33059187 | MS.gene78189:CDS |
| ACTATATGGTGAGGGATGAA+TGG | 0.492619 | 2.2:+33059082 | MS.gene78189:CDS |
| GAATGGGTGGAAGATGAAAC+AGG | 0.500205 | 2.2:+33059099 | MS.gene78189:CDS |
| ATGCAAAGGATATCAATTTG+AGG | 0.510644 | 2.2:+33055951 | MS.gene78189:CDS |
| TCGTCGATTTCGGGATGCAT+GGG | 0.512384 | 2.2:+33058761 | MS.gene78189:CDS |
| GTGAAGCTGCAGGGAAATTG+AGG | 0.515270 | 2.2:+33054974 | MS.gene78189:CDS |
| TGCAAATTAAGGATCTATAG+AGG | 0.521117 | 2.2:-33056244 | None:intergenic |
| AAAGAAGAACAAGAACAAGA+AGG | 0.522290 | 2.2:+33054754 | MS.gene78189:CDS |
| CTATATGGTGAGGGATGAAT+GGG | 0.530924 | 2.2:+33059083 | MS.gene78189:CDS |
| GATTGAGAAGAATCTCAATT+GGG | 0.531700 | 2.2:+33054797 | MS.gene78189:CDS |
| GAATGAATCAGAGAAGAAAG+TGG | 0.540310 | 2.2:+33055422 | MS.gene78189:CDS |
| AAGATAGACAAGGCCTACAT+AGG | 0.541659 | 2.2:-33056210 | None:intergenic |
| AATTTGATGAATTGGATGAT+GGG | 0.543422 | 2.2:+33055100 | MS.gene78189:CDS |
| TGAATTCCTTCTGATTGTAG+GGG | 0.543656 | 2.2:-33055547 | None:intergenic |
| TCAAAATTCACCTGAATCAG+TGG | 0.544044 | 2.2:+33055212 | MS.gene78189:CDS |
| GCTACCAACAAAGTCAAGAA+AGG | 0.545347 | 2.2:+33059177 | MS.gene78189:CDS |
| AGCCCAATTCAGATTTCCAA+AGG | 0.554864 | 2.2:+33054841 | MS.gene78189:CDS |
| GAACAAGAAGGAGGAAATGT+TGG | 0.555049 | 2.2:+33054766 | MS.gene78189:CDS |
| TTCTTGAACTCGATCCAACT+CGG | 0.555375 | 2.2:-33055061 | None:intergenic |
| AGATCCTGGCACCACAATGA+AGG | 0.555506 | 2.2:+33056735 | MS.gene78189:CDS |
| GAATGAAAGCTTTGATGTGA+AGG | 0.555982 | 2.2:+33055305 | MS.gene78189:CDS |
| GATAAGATCTGATATGCAGA+AGG | 0.555989 | 2.2:+33054945 | MS.gene78189:CDS |
| CAAAACAAGTTGCAGAGTCT+AGG | 0.557021 | 2.2:+33055761 | MS.gene78189:CDS |
| TGGTTGCTGCAGGGTCAGTG+TGG | 0.558063 | 2.2:+33054674 | MS.gene78189:CDS |
| TTGGTTCCATCAGAAATGCA+TGG | 0.559390 | 2.2:-33054877 | None:intergenic |
| AGTCTCATCTTCTTATGCAA+AGG | 0.559905 | 2.2:+33055937 | MS.gene78189:CDS |
| GAGGAACCATGCATTTCTGA+TGG | 0.565807 | 2.2:+33054871 | MS.gene78189:CDS |
| TGAGAAAGATGAAAATGTTG+AGG | 0.571155 | 2.2:+33055140 | MS.gene78189:CDS |
| TTAAATAATTACCTTCATTG+TGG | 0.571660 | 2.2:-33056746 | None:intergenic |
| CCATAGTGGATTTAATATTG+TGG | 0.571931 | 2.2:+33055864 | MS.gene78189:intron |
| AAGAGTGATCAAGTTAAAGG+TGG | 0.572772 | 2.2:+33054709 | MS.gene78189:CDS |
| GAGGAAGACGAAATCCGAGT+TGG | 0.576151 | 2.2:+33055047 | MS.gene78189:CDS |
| GAAGAACAAGAACAAGAAGG+AGG | 0.579849 | 2.2:+33054757 | MS.gene78189:CDS |
| TGAGGAAATTGAAATTGAGA+TGG | 0.583763 | 2.2:+33055281 | MS.gene78189:CDS |
| GGGGATTGCTTCACTACAAG+AGG | 0.585727 | 2.2:-33055528 | None:intergenic |
| TGGTGAGGTTGAAGATGATG+AGG | 0.590184 | 2.2:+33055263 | MS.gene78189:CDS |
| AGAATTCATTCAAATAAGGT+AGG | 0.591737 | 2.2:-33056684 | None:intergenic |
| GGTTGCTGCAGGGTCAGTGT+GGG | 0.592884 | 2.2:+33054675 | MS.gene78189:CDS |
| CCTGAATCAGTGGTTCATGT+TGG | 0.600898 | 2.2:+33055222 | MS.gene78189:CDS |
| TATGGTGAGGGATGAATGGG+TGG | 0.602229 | 2.2:+33059086 | MS.gene78189:CDS |
| GAATCAGTGGTTCATGTTGG+TGG | 0.602680 | 2.2:+33055225 | MS.gene78189:CDS |
| ATCAACAACACTATATGGTG+AGG | 0.602777 | 2.2:+33059073 | MS.gene78189:CDS |
| CAAGAAGGAGGAAATGTTGG+TGG | 0.603269 | 2.2:+33054769 | MS.gene78189:CDS |
| AAACAGGTTGTGATGAAGCA+TGG | 0.604392 | 2.2:+33059115 | MS.gene78189:CDS |
| GATATCAAGCAATGTTGATG+TGG | 0.605869 | 2.2:+33055188 | MS.gene78189:CDS |
| TGATCAATGGATAAAAGAAG+AGG | 0.617810 | 2.2:+33054649 | None:intergenic |
| GAATCAACAAGAAAATGATA+GGG | 0.618015 | 2.2:+33055365 | MS.gene78189:CDS |
| AACAGGTTGTGATGAAGCAT+GGG | 0.624032 | 2.2:+33059116 | MS.gene78189:CDS |
| TCTGATATGCAGAAGGGTGG+TGG | 0.626002 | 2.2:+33054952 | MS.gene78189:CDS |
| GAAGAGGTGTGGTTGCTGCA+GGG | 0.627693 | 2.2:+33054665 | MS.gene78189:CDS |
| AGGGTGGTGGTGAAGCTGCA+GGG | 0.632751 | 2.2:+33054965 | MS.gene78189:CDS |
| AGCAATCCCCTACAATCAGA+AGG | 0.635579 | 2.2:+33055541 | MS.gene78189:CDS |
| AGATCTGATATGCAGAAGGG+TGG | 0.640604 | 2.2:+33054949 | MS.gene78189:CDS |
| TCAACAACACTATATGGTGA+GGG | 0.642871 | 2.2:+33059074 | MS.gene78189:CDS |
| AATGGATAAAAGAAGAGGTG+TGG | 0.650250 | 2.2:+33054654 | None:intergenic |
| GGTGGTGATTCTGAATCAGA+TGG | 0.664264 | 2.2:+33055243 | MS.gene78189:CDS |
| TGATTCTGAATCAGATGGTG+AGG | 0.669622 | 2.2:+33055248 | MS.gene78189:CDS |
| ATAAGATCTGATATGCAGAA+GGG | 0.678384 | 2.2:+33054946 | MS.gene78189:CDS |
| GGGATTGCTTCACTACAAGA+GGG | 0.694450 | 2.2:-33055527 | None:intergenic |
| AGATAACTGCAAGATAGACA+AGG | 0.714341 | 2.2:-33056220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATAGTG+GGG | + | chr2.2:33056553-33056572 | MS.gene78189:intron | 10.0% |
| !! | TATATTGAAAATGATTATAT+AGG | + | chr2.2:33058576-33058595 | MS.gene78189:intron | 10.0% |
| !! | TAATTAATAAATACATCACA+TGG | + | chr2.2:33058165-33058184 | MS.gene78189:intron | 15.0% |
| !!! | AGTCAATTTTTGTATTTTTT+TGG | + | chr2.2:33055627-33055646 | MS.gene78189:intron | 15.0% |
| !!! | ATACATATTTTTCATTTTCA+GGG | + | chr2.2:33057852-33057871 | MS.gene78189:intron | 15.0% |
| !!! | ATTTTTCGAGTTTATATTTA+AGG | + | chr2.2:33056509-33056528 | MS.gene78189:intron | 15.0% |
| !!! | CAATATAAATTTTACTGTTT+CGG | + | chr2.2:33056138-33056157 | MS.gene78189:intron | 15.0% |
| !!! | CAGTTGTTAATTTTTTTTAT+GGG | + | chr2.2:33056584-33056603 | MS.gene78189:intron | 15.0% |
| !!! | GTCAATTTTTGTATTTTTTT+GGG | + | chr2.2:33055628-33055647 | MS.gene78189:intron | 15.0% |
| !!! | TATACATATTTTTCATTTTC+AGG | + | chr2.2:33057851-33057870 | MS.gene78189:intron | 15.0% |
| !!! | TCAGTTGTTAATTTTTTTTA+TGG | + | chr2.2:33056583-33056602 | MS.gene78189:intron | 15.0% |
| !!! | TTATTATTATTGCTAGTTTT+AGG | + | chr2.2:33057761-33057780 | MS.gene78189:intron | 15.0% |
| !! | AAACTTACTATATACGAATA+CGG | - | chr2.2:33056485-33056504 | None:intergenic | 20.0% |
| !! | AAAGAATGAATTTGATGAAT+TGG | + | chr2.2:33055092-33055111 | MS.gene78189:CDS | 20.0% |
| !! | AATATCACGTGTATAAAAAA+TGG | - | chr2.2:33057586-33057605 | None:intergenic | 20.0% |
| !! | GAAAATTTCTTACTTGAATT+GGG | - | chr2.2:33055597-33055616 | None:intergenic | 20.0% |
| !! | TCATAATAATCGTAACATAA+TGG | + | chr2.2:33058342-33058361 | MS.gene78189:intron | 20.0% |
| !! | TCATTAACATTCTTATTGAT+TGG | - | chr2.2:33055015-33055034 | None:intergenic | 20.0% |
| !! | TGAAAATTTCTTACTTGAAT+TGG | - | chr2.2:33055598-33055617 | None:intergenic | 20.0% |
| !! | TTAAATAATTACCTTCATTG+TGG | - | chr2.2:33056749-33056768 | None:intergenic | 20.0% |
| !! | TTAATGATTCAATTGAATTG+AGG | + | chr2.2:33055028-33055047 | MS.gene78189:CDS | 20.0% |
| !! | TTGCGTATAAAATAAAAGTT+AGG | - | chr2.2:33058888-33058907 | None:intergenic | 20.0% |
| !!! | ATTGTTTTACATTGACATAT+TGG | - | chr2.2:33058606-33058625 | None:intergenic | 20.0% |
| !!! | CAACATTAAATTTGTTTTTG+TGG | + | chr2.2:33057269-33057288 | MS.gene78189:intron | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+GGG | + | chr2.2:33056086-33056105 | MS.gene78189:intron | 20.0% |
| !!! | GATATGATAAAGCAAATTTT+TGG | + | chr2.2:33058736-33058755 | MS.gene78189:intron | 20.0% |
| !!! | TAAAATCGGTAAGTTTTTAA+AGG | + | chr2.2:33056907-33056926 | MS.gene78189:intron | 20.0% |
| !!! | TACATATCTACTCTTTTATA+CGG | + | chr2.2:33057204-33057223 | MS.gene78189:intron | 20.0% |
| !!! | TCTTTTATTTTGGTAAACTA+GGG | + | chr2.2:33058304-33058323 | MS.gene78189:intron | 20.0% |
| !!! | TTGTGGATTTTTTTTTTTTG+AGG | + | chr2.2:33057286-33057305 | MS.gene78189:intron | 20.0% |
| ! | AACTTACTATATACGAATAC+GGG | - | chr2.2:33056484-33056503 | None:intergenic | 25.0% |
| ! | AATTTGATGAATTGGATGAT+GGG | + | chr2.2:33055100-33055119 | MS.gene78189:CDS | 25.0% |
| ! | ACATTAATTACATTATCAGC+GGG | - | chr2.2:33056430-33056449 | None:intergenic | 25.0% |
| ! | AGAATTCATTCAAATAAGGT+AGG | - | chr2.2:33056687-33056706 | None:intergenic | 25.0% |
| ! | AGTGCATTGTTAAATTAGTT+GGG | + | chr2.2:33056306-33056325 | MS.gene78189:intron | 25.0% |
| ! | ATACTATCAACAACACTATA+TGG | + | chr2.2:33059068-33059087 | MS.gene78189:CDS | 25.0% |
| ! | ATAGTGTAGAATAGATTAGA+CGG | + | chr2.2:33057130-33057149 | MS.gene78189:intron | 25.0% |
| ! | CACAAAAAAAAACTAATGTG+TGG | + | chr2.2:33058999-33059018 | MS.gene78189:intron | 25.0% |
| ! | CACATTAATTACATTATCAG+CGG | - | chr2.2:33056431-33056450 | None:intergenic | 25.0% |
| ! | CCCAAAATATAAGCAAAAAT+TGG | - | chr2.2:33056089-33056108 | None:intergenic | 25.0% |
| ! | CTTATCTTTCTTGATTGAAT+CGG | - | chr2.2:33054931-33054950 | None:intergenic | 25.0% |
| ! | GAATCAACAAGAAAATGATA+GGG | + | chr2.2:33055365-33055384 | MS.gene78189:CDS | 25.0% |
| ! | GACAAGAATTCATTCAAATA+AGG | - | chr2.2:33056691-33056710 | None:intergenic | 25.0% |
| ! | TAGTAATAATGTAGATCTGA+CGG | + | chr2.2:33057647-33057666 | MS.gene78189:intron | 25.0% |
| ! | TAGTGCATTGTTAAATTAGT+TGG | + | chr2.2:33056305-33056324 | MS.gene78189:intron | 25.0% |
| ! | TCTACATTATTACTATGCAT+TGG | - | chr2.2:33057642-33057661 | None:intergenic | 25.0% |
| ! | TGAATCAACAAGAAAATGAT+AGG | + | chr2.2:33055364-33055383 | MS.gene78189:CDS | 25.0% |
| ! | TTATCTTTCTTGATTGAATC+GGG | - | chr2.2:33054930-33054949 | None:intergenic | 25.0% |
| ! | TTTCATAACTATTTGGAAGA+TGG | + | chr2.2:33056883-33056902 | MS.gene78189:CDS | 25.0% |
| ! | TTTGTGATGAAATCTCATAT+TGG | - | chr2.2:33055484-33055503 | None:intergenic | 25.0% |
| !! | GCCAATTTTTGCTTATATTT+TGG | + | chr2.2:33056085-33056104 | MS.gene78189:intron | 25.0% |
| !! | TTCAAAACAATCTTCTTTTC+TGG | - | chr2.2:33055405-33055424 | None:intergenic | 25.0% |
| !!! | ACATTAGTTTTTTTTTGTGG+TGG | - | chr2.2:33058998-33059017 | None:intergenic | 25.0% |
| !!! | ATTATTGCTAGTTTTAGGTT+TGG | + | chr2.2:33057766-33057785 | MS.gene78189:intron | 25.0% |
| !!! | CACACATTAGTTTTTTTTTG+TGG | - | chr2.2:33059001-33059020 | None:intergenic | 25.0% |
| !!! | GTCTTTTATTTTGGTAAACT+AGG | + | chr2.2:33058303-33058322 | MS.gene78189:intron | 25.0% |
| !!! | GTGACAATTGTCTTTTATTT+TGG | + | chr2.2:33058294-33058313 | MS.gene78189:intron | 25.0% |
| !!! | TAATTTTTTTTATGGGCTCA+GGG | + | chr2.2:33056591-33056610 | MS.gene78189:intron | 25.0% |
| !!! | TTAATTTTTTTTATGGGCTC+AGG | + | chr2.2:33056590-33056609 | MS.gene78189:intron | 25.0% |
| !!! | TTTTTGAGGAATTGTTTTTC+TGG | + | chr2.2:33057300-33057319 | MS.gene78189:intron | 25.0% |
| AAAGAAGAACAAGAACAAGA+AGG | + | chr2.2:33054754-33054773 | MS.gene78189:CDS | 30.0% | |
| AAATAAGACTGCAAAAAGCA+AGG | - | chr2.2:33056181-33056200 | None:intergenic | 30.0% | |
| AAATATAAGCATGCAACGAT+CGG | - | chr2.2:33057183-33057202 | None:intergenic | 30.0% | |
| AACCTATACTCATCAAAATC+AGG | - | chr2.2:33057109-33057128 | None:intergenic | 30.0% | |
| AATAAGACTGCAAAAAGCAA+GGG | - | chr2.2:33056180-33056199 | None:intergenic | 30.0% | |
| ACTAACTCTAGTACTATTTC+AGG | + | chr2.2:33057010-33057029 | MS.gene78189:intron | 30.0% | |
| AGATTGAGAAGAATCTCAAT+TGG | + | chr2.2:33054796-33054815 | MS.gene78189:CDS | 30.0% | |
| AGTAATAATGTAGATCTGAC+GGG | + | chr2.2:33057648-33057667 | MS.gene78189:intron | 30.0% | |
| AGTTACTTACCTGCAAATTA+AGG | - | chr2.2:33056258-33056277 | None:intergenic | 30.0% | |
| ATAAGATCTGATATGCAGAA+GGG | + | chr2.2:33054946-33054965 | MS.gene78189:CDS | 30.0% | |
| ATACGACAAAGATATAAGGA+AGG | + | chr2.2:33057552-33057571 | MS.gene78189:intron | 30.0% | |
| ATGAAGAGTGATCAAGTTAA+AGG | + | chr2.2:33054706-33054725 | MS.gene78189:CDS | 30.0% | |
| ATGCAAAGGATATCAATTTG+AGG | + | chr2.2:33055951-33055970 | MS.gene78189:CDS | 30.0% | |
| ATTTGGAAGATGGCTAAAAT+CGG | + | chr2.2:33056893-33056912 | MS.gene78189:CDS | 30.0% | |
| CAATATTAAATCCACTATGG+AGG | - | chr2.2:33055864-33055883 | None:intergenic | 30.0% | |
| CCACAATATTAAATCCACTA+TGG | - | chr2.2:33055867-33055886 | None:intergenic | 30.0% | |
| GAATTTGATGAATTGGATGA+TGG | + | chr2.2:33055099-33055118 | MS.gene78189:CDS | 30.0% | |
| GATTGAGAAGAATCTCAATT+GGG | + | chr2.2:33054797-33054816 | MS.gene78189:CDS | 30.0% | |
| GCAACAAAACTTAACGTATT+TGG | - | chr2.2:33056067-33056086 | None:intergenic | 30.0% | |
| GTACTAGTTAAACTAATGTG+TGG | + | chr2.2:33058919-33058938 | MS.gene78189:intron | 30.0% | |
| GTGGAAGTTTCATAACTATT+TGG | + | chr2.2:33056876-33056895 | MS.gene78189:CDS | 30.0% | |
| TAAAGGCCTAACAAAATGAT+GGG | + | chr2.2:33056924-33056943 | MS.gene78189:intron | 30.0% | |
| TAAGAGAACAAGATGCAATT+TGG | + | chr2.2:33056647-33056666 | MS.gene78189:CDS | 30.0% | |
| TCCAATACGACAAAGATATA+AGG | + | chr2.2:33057548-33057567 | MS.gene78189:intron | 30.0% | |
| TCCTTATATCTTTGTCGTAT+TGG | - | chr2.2:33057552-33057571 | None:intergenic | 30.0% | |
| TGAGAAAGATGAAAATGTTG+AGG | + | chr2.2:33055140-33055159 | MS.gene78189:CDS | 30.0% | |
| TGAGGAAATTGAAATTGAGA+TGG | + | chr2.2:33055281-33055300 | MS.gene78189:CDS | 30.0% | |
| TGCAAATTAAGGATCTATAG+AGG | - | chr2.2:33056247-33056266 | None:intergenic | 30.0% | |
| TTAAAGGCCTAACAAAATGA+TGG | + | chr2.2:33056923-33056942 | MS.gene78189:intron | 30.0% | |
| TTGAATTCCTTCTGATTGTA+GGG | - | chr2.2:33055551-33055570 | None:intergenic | 30.0% | |
| TTGATTCACAGTAACAACTT+TGG | - | chr2.2:33055352-33055371 | None:intergenic | 30.0% | |
| TTTCTTACTTGAATTGGGTT+TGG | - | chr2.2:33055592-33055611 | None:intergenic | 30.0% | |
| TTTGAATTCCTTCTGATTGT+AGG | - | chr2.2:33055552-33055571 | None:intergenic | 30.0% | |
| ! | AATTGGGTTTGGAGAAATTT+TGG | - | chr2.2:33055581-33055600 | None:intergenic | 30.0% |
| ! | GTGTGTGTTACTAATCTTTA+AGG | + | chr2.2:33055695-33055714 | MS.gene78189:intron | 30.0% |
| ! | TATACGAATACGGGTATTTT+AGG | - | chr2.2:33056475-33056494 | None:intergenic | 30.0% |
| ! | TGTCCTAACTTTAGAAAATG+TGG | + | chr2.2:33055661-33055680 | MS.gene78189:intron | 30.0% |
| ! | TGTTTATTTCATGCGAGTTT+TGG | + | chr2.2:33057519-33057538 | MS.gene78189:intron | 30.0% |
| ! | TTCCTTTGGAAATCTGAATT+GGG | - | chr2.2:33054846-33054865 | None:intergenic | 30.0% |
| ! | TTTCCTTTGGAAATCTGAAT+TGG | - | chr2.2:33054847-33054866 | None:intergenic | 30.0% |
| ! | TTTTCATCATACTAGTGTAG+TGG | - | chr2.2:33058467-33058486 | None:intergenic | 30.0% |
| !! | AAACACAGTATTGTTGACTT+TGG | - | chr2.2:33058394-33058413 | None:intergenic | 30.0% |
| !! | AACACAGTATTGTTGACTTT+GGG | - | chr2.2:33058393-33058412 | None:intergenic | 30.0% |
| !! | CCATAGTGGATTTAATATTG+TGG | + | chr2.2:33055864-33055883 | MS.gene78189:intron | 30.0% |
| !! | TCTATAGATCCTTAATTTGC+AGG | + | chr2.2:33056246-33056265 | MS.gene78189:CDS | 30.0% |
| !! | TTCCTGATTTTGATGAGTAT+AGG | + | chr2.2:33057104-33057123 | MS.gene78189:intron | 30.0% |
| !!! | AATTTTTTTTATGGGCTCAG+GGG | + | chr2.2:33056592-33056611 | MS.gene78189:intron | 30.0% |
| !!! | ACACCACATTTTCTAAAGTT+AGG | - | chr2.2:33055667-33055686 | None:intergenic | 30.0% |
| !!! | ATTTTTGGATTCGTCGATTT+CGG | + | chr2.2:33058751-33058770 | MS.gene78189:CDS | 30.0% |
| !!! | TTTGGTTTTCTTTTAGCCAA+TGG | + | chr2.2:33058197-33058216 | MS.gene78189:intron | 30.0% |
| AAAAAACATGATTGCGCCAT+TGG | - | chr2.2:33058216-33058235 | None:intergenic | 35.0% | |
| AAACTAGGGAACACAATTGT+TGG | + | chr2.2:33058318-33058337 | MS.gene78189:intron | 35.0% | |
| AAATATCCAGAGAGAGTCAT+TGG | + | chr2.2:33058523-33058542 | MS.gene78189:intron | 35.0% | |
| AAATGTGTACGAATTGCAGT+TGG | + | chr2.2:33056826-33056845 | MS.gene78189:intron | 35.0% | |
| AAGAGTGATCAAGTTAAAGG+TGG | + | chr2.2:33054709-33054728 | MS.gene78189:CDS | 35.0% | |
| ACCTTACAAGTGATAAGAGA+GGG | - | chr2.2:33057462-33057481 | None:intergenic | 35.0% | |
| ACGAAGAGTAAAGACAAAAG+AGG | - | chr2.2:33058436-33058455 | None:intergenic | 35.0% | |
| AGATAACTGCAAGATAGACA+AGG | - | chr2.2:33056223-33056242 | None:intergenic | 35.0% | |
| AGTACTATTTCAGGCTTCTT+TGG | + | chr2.2:33057019-33057038 | MS.gene78189:intron | 35.0% | |
| AGTCTCATCTTCTTATGCAA+AGG | + | chr2.2:33055937-33055956 | MS.gene78189:CDS | 35.0% | |
| ATCAACAACACTATATGGTG+AGG | + | chr2.2:33059073-33059092 | MS.gene78189:CDS | 35.0% | |
| ATGAAATGGAAGACTCTTCT+TGG | - | chr2.2:33054899-33054918 | None:intergenic | 35.0% | |
| CAGGGTGCATAATATATGTT+AGG | + | chr2.2:33058969-33058988 | MS.gene78189:intron | 35.0% | |
| CCTACGTGTTAAAATTAGAG+TGG | - | chr2.2:33056370-33056389 | None:intergenic | 35.0% | |
| GAACACTTTATTAGCTAGCA+TGG | + | chr2.2:33056788-33056807 | MS.gene78189:intron | 35.0% | |
| GAATCCTTTCTTGACTTTGT+TGG | - | chr2.2:33059184-33059203 | None:intergenic | 35.0% | |
| GAATGAATCAGAGAAGAAAG+TGG | + | chr2.2:33055422-33055441 | MS.gene78189:CDS | 35.0% | |
| GATAAGATCTGATATGCAGA+AGG | + | chr2.2:33054945-33054964 | MS.gene78189:CDS | 35.0% | |
| GATATCAAGCAATGTTGATG+TGG | + | chr2.2:33055188-33055207 | MS.gene78189:CDS | 35.0% | |
| GATTTCCAAAGGAAAAACAG+AGG | + | chr2.2:33054852-33054871 | MS.gene78189:CDS | 35.0% | |
| GCAATTCGTACACATTTAGA+GGG | - | chr2.2:33056823-33056842 | None:intergenic | 35.0% | |
| GTCCCAAATGTAAGCAAAAA+CGG | + | chr2.2:33056007-33056026 | MS.gene78189:intron | 35.0% | |
| TACCTTACAAGTGATAAGAG+AGG | - | chr2.2:33057463-33057482 | None:intergenic | 35.0% | |
| TCAAAATTCACCTGAATCAG+TGG | + | chr2.2:33055212-33055231 | MS.gene78189:CDS | 35.0% | |
| TCAACAACACTATATGGTGA+GGG | + | chr2.2:33059074-33059093 | MS.gene78189:CDS | 35.0% | |
| TCAAGATCAGCATTTGTGTT+TGG | + | chr2.2:33055896-33055915 | MS.gene78189:CDS | 35.0% | |
| TCAGCACAATTAACTGCATA+TGG | + | chr2.2:33057076-33057095 | MS.gene78189:CDS | 35.0% | |
| TCCCAAATGTAAGCAAAAAC+GGG | + | chr2.2:33056008-33056027 | MS.gene78189:intron | 35.0% | |
| TGAATTCCTTCTGATTGTAG+GGG | - | chr2.2:33055550-33055569 | None:intergenic | 35.0% | |
| TGCAATTCGTACACATTTAG+AGG | - | chr2.2:33056824-33056843 | None:intergenic | 35.0% | |
| TGCAATTTGGATGCTGAAAT+TGG | + | chr2.2:33056660-33056679 | MS.gene78189:CDS | 35.0% | |
| TGCAGTGTTTGTACTATTTG+TGG | + | chr2.2:33059038-33059057 | MS.gene78189:intron | 35.0% | |
| TGGAGTCAACATAGAATAGA+AGG | - | chr2.2:33057622-33057641 | None:intergenic | 35.0% | |
| TTAATTACATTATCAGCGGG+TGG | - | chr2.2:33056427-33056446 | None:intergenic | 35.0% | |
| TTTATGATTCTCCTCCATAG+TGG | + | chr2.2:33055850-33055869 | MS.gene78189:intron | 35.0% | |
| TTTCTTCTGTTCTGCTTCAT+TGG | - | chr2.2:33055451-33055470 | None:intergenic | 35.0% | |
| ! | GAAAGACCCATCATTTTGTT+AGG | - | chr2.2:33056933-33056952 | None:intergenic | 35.0% |
| ! | GAATGAAAGCTTTGATGTGA+AGG | + | chr2.2:33055305-33055324 | MS.gene78189:CDS | 35.0% |
| ! | TCAGCATTTGTGTTTGGAAT+TGG | + | chr2.2:33055902-33055921 | MS.gene78189:CDS | 35.0% |
| ! | TTGATCCCATAACTTGCATT+GGG | + | chr2.2:33058257-33058276 | MS.gene78189:intron | 35.0% |
| ! | TTTGATCCCATAACTTGCAT+TGG | + | chr2.2:33058256-33058275 | MS.gene78189:intron | 35.0% |
| !! | ACCCGTTTTTGCTTACATTT+GGG | - | chr2.2:33056012-33056031 | None:intergenic | 35.0% |
| !! | AGCTAGTTTGATTTTGTCGT+TGG | - | chr2.2:33058104-33058123 | None:intergenic | 35.0% |
| !! | AGTATTGTTGACTTTGGGAT+TGG | - | chr2.2:33058388-33058407 | None:intergenic | 35.0% |
| !! | ATCACATGGATTAGCATCTT+TGG | + | chr2.2:33058179-33058198 | MS.gene78189:intron | 35.0% |
| !! | ATTTCTGGAATGTCCTATGT+AGG | + | chr2.2:33056197-33056216 | MS.gene78189:CDS | 35.0% |
| !! | CCACTCTAATTTTAACACGT+AGG | + | chr2.2:33056367-33056386 | MS.gene78189:intron | 35.0% |
| !! | GTATTGTTGACTTTGGGATT+GGG | - | chr2.2:33058387-33058406 | None:intergenic | 35.0% |
| !! | TAGACTCTGCAACTTGTTTT+GGG | - | chr2.2:33055762-33055781 | None:intergenic | 35.0% |
| !! | TTGTGTTGTTTCTGTCTAAC+TGG | - | chr2.2:33059150-33059169 | None:intergenic | 35.0% |
| !!! | AAACTGAAAGCACTTTTCTC+TGG | + | chr2.2:33056712-33056731 | MS.gene78189:CDS | 35.0% |
| !!! | CTATTTGTTTTGGCAAGATG+TGG | + | chr2.2:33056857-33056876 | MS.gene78189:CDS | 35.0% |
| !!! | GCTTTTTGCAGTCTTATTTC+TGG | + | chr2.2:33056182-33056201 | MS.gene78189:intron | 35.0% |
| !!! | GGCAGTTTTGCTATTTGTTT+TGG | + | chr2.2:33056847-33056866 | MS.gene78189:CDS | 35.0% |
| !!! | TTTTTGGATTCGTCGATTTC+GGG | + | chr2.2:33058752-33058771 | MS.gene78189:CDS | 35.0% |
| AAACAGGTTGTGATGAAGCA+TGG | + | chr2.2:33059115-33059134 | MS.gene78189:CDS | 40.0% | |
| AACAGGTTGTGATGAAGCAT+GGG | + | chr2.2:33059116-33059135 | MS.gene78189:CDS | 40.0% | |
| AAGAGACCCAATGCAAGTTA+TGG | - | chr2.2:33058266-33058285 | None:intergenic | 40.0% | |
| AAGATAGACAAGGCCTACAT+AGG | - | chr2.2:33056213-33056232 | None:intergenic | 40.0% | |
| ACTATATGGTGAGGGATGAA+TGG | + | chr2.2:33059082-33059101 | MS.gene78189:CDS | 40.0% | |
| AGAGACCCAATGCAAGTTAT+GGG | - | chr2.2:33058265-33058284 | None:intergenic | 40.0% | |
| AGCCCAATTCAGATTTCCAA+AGG | + | chr2.2:33054841-33054860 | MS.gene78189:CDS | 40.0% | |
| ATCATACTAGTGTAGTGGCT+GGG | - | chr2.2:33058462-33058481 | None:intergenic | 40.0% | |
| ATCGGGCTTCTTGTATGAAA+TGG | - | chr2.2:33054913-33054932 | None:intergenic | 40.0% | |
| ATCTGTTGTTGCTCGCATTT+GGG | + | chr2.2:33058845-33058864 | MS.gene78189:CDS | 40.0% | |
| ATGCACTCACAAAAAAGCTG+TGG | + | chr2.2:33058788-33058807 | MS.gene78189:CDS | 40.0% | |
| ATTTAGTGTATGCCGACAGA+AGG | - | chr2.2:33057240-33057259 | None:intergenic | 40.0% | |
| CAAAACAAGTTGCAGAGTCT+AGG | + | chr2.2:33055761-33055780 | MS.gene78189:CDS | 40.0% | |
| CTATATGGTGAGGGATGAAT+GGG | + | chr2.2:33059083-33059102 | MS.gene78189:CDS | 40.0% | |
| GAACAAGAAGGAGGAAATGT+TGG | + | chr2.2:33054766-33054785 | MS.gene78189:CDS | 40.0% | |
| GAAGAACAAGAACAAGAAGG+AGG | + | chr2.2:33054757-33054776 | MS.gene78189:CDS | 40.0% | |
| GAATACGAAGAGCAGATCTT+TGG | - | chr2.2:33057058-33057077 | None:intergenic | 40.0% | |
| GCTACCAACAAAGTCAAGAA+AGG | + | chr2.2:33059177-33059196 | MS.gene78189:CDS | 40.0% | |
| GGATTATGATACCCTTCTGT+CGG | + | chr2.2:33057225-33057244 | MS.gene78189:intron | 40.0% | |
| GTAACAACTTTGGATTCTGC+TGG | - | chr2.2:33055342-33055361 | None:intergenic | 40.0% | |
| GTAGAATAGATTAGACGGTG+CGG | + | chr2.2:33057135-33057154 | MS.gene78189:intron | 40.0% | |
| GTTATGGGATCAAAACTGTC+AGG | - | chr2.2:33058250-33058269 | None:intergenic | 40.0% | |
| TACACTGACAGACAGACAAA+TGG | + | chr2.2:33056978-33056997 | MS.gene78189:intron | 40.0% | |
| TAGGCATATTCGGTCTAGTA+TGG | + | chr2.2:33058814-33058833 | MS.gene78189:CDS | 40.0% | |
| TGATTCTGAATCAGATGGTG+AGG | + | chr2.2:33055248-33055267 | MS.gene78189:CDS | 40.0% | |
| TTCTTGAACTCGATCCAACT+CGG | - | chr2.2:33055064-33055083 | None:intergenic | 40.0% | |
| TTGGTTCCATCAGAAATGCA+TGG | - | chr2.2:33054880-33054899 | None:intergenic | 40.0% | |
| TTTAGTGTATGCCGACAGAA+GGG | - | chr2.2:33057239-33057258 | None:intergenic | 40.0% | |
| ! | CTACTGCGTTCTTCTTCTTT+TGG | - | chr2.2:33055728-33055747 | None:intergenic | 40.0% |
| !! | CTAGACTCTGCAACTTGTTT+TGG | - | chr2.2:33055763-33055782 | None:intergenic | 40.0% |
| !! | GACCCGTTTTTGCTTACATT+TGG | - | chr2.2:33056013-33056032 | None:intergenic | 40.0% |
| !! | GGGTCAACATTTGTTGTATC+TGG | + | chr2.2:33056028-33056047 | MS.gene78189:intron | 40.0% |
| !! | TGGTTCCTCTGTTTTTCCTT+TGG | - | chr2.2:33054860-33054879 | None:intergenic | 40.0% |
| !! | TTGCTTATATTTTGGGAGCG+AGG | + | chr2.2:33056093-33056112 | MS.gene78189:intron | 40.0% |
| !!! | TGCAACTTGTTTTGGGTTTG+TGG | - | chr2.2:33055755-33055774 | None:intergenic | 40.0% |
| ACTACAAGAGGGACAGAAAC+TGG | - | chr2.2:33055519-33055538 | None:intergenic | 45.0% | |
| AGATCTGATATGCAGAAGGG+TGG | + | chr2.2:33054949-33054968 | MS.gene78189:CDS | 45.0% | |
| AGCAATCCCCTACAATCAGA+AGG | + | chr2.2:33055541-33055560 | MS.gene78189:CDS | 45.0% | |
| ATGCAACGATCGGCTAATGT+GGG | - | chr2.2:33057173-33057192 | None:intergenic | 45.0% | |
| ATTACCTTCATTGTGGTGCC+AGG | - | chr2.2:33056742-33056761 | None:intergenic | 45.0% | |
| CAAGAAGGAGGAAATGTTGG+TGG | + | chr2.2:33054769-33054788 | MS.gene78189:CDS | 45.0% | |
| CACAAAAAAGCTGTGGCTCT+AGG | + | chr2.2:33058795-33058814 | MS.gene78189:CDS | 45.0% | |
| CATCATACTAGTGTAGTGGC+TGG | - | chr2.2:33058463-33058482 | None:intergenic | 45.0% | |
| CATCTGTTGTTGCTCGCATT+TGG | + | chr2.2:33058844-33058863 | MS.gene78189:CDS | 45.0% | |
| CCTGAATCAGTGGTTCATGT+TGG | + | chr2.2:33055222-33055241 | MS.gene78189:CDS | 45.0% | |
| GAATCAGTGGTTCATGTTGG+TGG | + | chr2.2:33055225-33055244 | MS.gene78189:CDS | 45.0% | |
| GAATGGGTGGAAGATGAAAC+AGG | + | chr2.2:33059099-33059118 | MS.gene78189:CDS | 45.0% | |
| GAGGAACCATGCATTTCTGA+TGG | + | chr2.2:33054871-33054890 | MS.gene78189:CDS | 45.0% | |
| GCAAAACCAATGACTCTCTC+TGG | - | chr2.2:33058532-33058551 | None:intergenic | 45.0% | |
| GCCCTCTCTTATCACTTGTA+AGG | + | chr2.2:33057458-33057477 | MS.gene78189:intron | 45.0% | |
| GGGATTGCTTCACTACAAGA+GGG | - | chr2.2:33055530-33055549 | None:intergenic | 45.0% | |
| GGTGGTGATTCTGAATCAGA+TGG | + | chr2.2:33055243-33055262 | MS.gene78189:CDS | 45.0% | |
| TGGTGAGGTTGAAGATGATG+AGG | + | chr2.2:33055263-33055282 | MS.gene78189:CDS | 45.0% | |
| TTGTCTTCGTGAGCTTGACT+CGG | + | chr2.2:33058942-33058961 | MS.gene78189:intron | 45.0% | |
| !! | CCAACATGAACCACTGATTC+AGG | - | chr2.2:33055225-33055244 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+TGG | + | chr2.2:33056551-33056570 | MS.gene78189:intron | 5.0% |
| !! | TATATATATATATATATAGT+GGG | + | chr2.2:33056552-33056571 | MS.gene78189:intron | 5.0% |
| AATGGTCCTCCACATCCTTG+TGG | + | chr2.2:33058360-33058379 | MS.gene78189:intron | 50.0% | |
| AGATCCTGGCACCACAATGA+AGG | + | chr2.2:33056735-33056754 | MS.gene78189:CDS | 50.0% | |
| CATGCAACGATCGGCTAATG+TGG | - | chr2.2:33057174-33057193 | None:intergenic | 50.0% | |
| GAGGAAGACGAAATCCGAGT+TGG | + | chr2.2:33055047-33055066 | MS.gene78189:CDS | 50.0% | |
| GGGGATTGCTTCACTACAAG+AGG | - | chr2.2:33055531-33055550 | None:intergenic | 50.0% | |
| GTGAAGCTGCAGGGAAATTG+AGG | + | chr2.2:33054974-33054993 | MS.gene78189:CDS | 50.0% | |
| TATGGTGAGGGATGAATGGG+TGG | + | chr2.2:33059086-33059105 | MS.gene78189:CDS | 50.0% | |
| TCTGATATGCAGAAGGGTGG+TGG | + | chr2.2:33054952-33054971 | MS.gene78189:CDS | 50.0% | |
| TGTCGTTGGATGAGACGATG+AGG | - | chr2.2:33058090-33058109 | None:intergenic | 50.0% | |
| !! | ACTTTGGGATTGGGACCACA+AGG | - | chr2.2:33058378-33058397 | None:intergenic | 50.0% |
| !! | GCACTTTTCTCTGGAGATCC+TGG | + | chr2.2:33056721-33056740 | MS.gene78189:CDS | 50.0% |
| !! | GCTGTGGCTCTAGGCATATT+CGG | + | chr2.2:33058804-33058823 | MS.gene78189:CDS | 50.0% |
| !! | TCGTCGATTTCGGGATGCAT+GGG | + | chr2.2:33058761-33058780 | MS.gene78189:CDS | 50.0% |
| !! | TTCGTCGATTTCGGGATGCA+TGG | + | chr2.2:33058760-33058779 | MS.gene78189:CDS | 50.0% |
| AGACGGTGCGGTGCTTTCAT+GGG | + | chr2.2:33057147-33057166 | MS.gene78189:intron | 55.0% | |
| GGATTGGGACCACAAGGATG+TGG | - | chr2.2:33058372-33058391 | None:intergenic | 55.0% | |
| GTTGTTGCTCGCATTTGGGC+AGG | + | chr2.2:33058849-33058868 | MS.gene78189:CDS | 55.0% | |
| TAGACGGTGCGGTGCTTTCA+TGG | + | chr2.2:33057146-33057165 | MS.gene78189:intron | 55.0% | |
| TTGGGACCACAAGGATGTGG+AGG | - | chr2.2:33058369-33058388 | None:intergenic | 55.0% | |
| ! | AGAAGAGGTGTGGTTGCTGC+AGG | + | chr2.2:33054664-33054683 | MS.gene78189:CDS | 55.0% |
| ! | GAAGAGGTGTGGTTGCTGCA+GGG | + | chr2.2:33054665-33054684 | MS.gene78189:CDS | 55.0% |
| !! | CTTCGTGAGCTTGACTCGGT+TGG | + | chr2.2:33058946-33058965 | MS.gene78189:intron | 55.0% |
| !! | TGAGCTTGACTCGGTTGGCA+GGG | + | chr2.2:33058951-33058970 | MS.gene78189:intron | 55.0% |
| GGTTGCTGCAGGGTCAGTGT+GGG | + | chr2.2:33054675-33054694 | MS.gene78189:CDS | 60.0% | |
| TGGTTGCTGCAGGGTCAGTG+TGG | + | chr2.2:33054674-33054693 | MS.gene78189:CDS | 60.0% | |
| ! | AAGGGTGGTGGTGAAGCTGC+AGG | + | chr2.2:33054964-33054983 | MS.gene78189:CDS | 60.0% |
| ! | AGGGTGGTGGTGAAGCTGCA+GGG | + | chr2.2:33054965-33054984 | MS.gene78189:CDS | 60.0% |
| !! | GTGAGCTTGACTCGGTTGGC+AGG | + | chr2.2:33058950-33058969 | MS.gene78189:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 33054655 | 33059206 | 33054655 | ID=MS.gene78189 |
| chr2.2 | mRNA | 33054655 | 33059206 | 33054655 | ID=MS.gene78189.t1;Parent=MS.gene78189 |
| chr2.2 | exon | 33054655 | 33055603 | 33054655 | ID=MS.gene78189.t1.exon1;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33054655 | 33055603 | 33054655 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33055717 | 33055782 | 33055717 | ID=MS.gene78189.t1.exon2;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33055717 | 33055782 | 33055717 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33055870 | 33055972 | 33055870 | ID=MS.gene78189.t1.exon3;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33055870 | 33055972 | 33055870 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33056193 | 33056267 | 33056193 | ID=MS.gene78189.t1.exon4;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33056193 | 33056267 | 33056193 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33056612 | 33056756 | 33056612 | ID=MS.gene78189.t1.exon5;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33056612 | 33056756 | 33056612 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33056845 | 33056914 | 33056845 | ID=MS.gene78189.t1.exon6;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33056845 | 33056914 | 33056845 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33057032 | 33057097 | 33057032 | ID=MS.gene78189.t1.exon7;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33057032 | 33057097 | 33057032 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33058748 | 33058870 | 33058748 | ID=MS.gene78189.t1.exon8;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33058748 | 33058870 | 33058748 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| chr2.2 | exon | 33059043 | 33059206 | 33059043 | ID=MS.gene78189.t1.exon9;Parent=MS.gene78189.t1 |
| chr2.2 | CDS | 33059043 | 33059206 | 33059043 | ID=cds.MS.gene78189.t1;Parent=MS.gene78189.t1 |
| Gene Sequence |
| Protein sequence |
